Rroxscaffold_2G00094850
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000076
Physical Location & Seq
Forward (+)
16214535 .. 16215908
1374 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00094850.1

Sequence Viewer

Length: 1374 bp
ATGCAGCAAGAGTTTGCAATGGAGGAGAGCAGAGGCAATCAACTTCCTGGAGAGAGGTTCTGCCCCATGGAGGACGAACTAGTTCTCTTCTACCTTAAGCCTCTCTTGAGCGGAGAGAAGGTGCCCGGCAGAAACAGCGTGGTGTTCGACTGCGACCTCTACGGTCGCCAAGAACCTTGGGAGATATGGGAGGCCTACAAGACCAGAAGACCAAACGACTTGAGGCTCAACAAGGACATCTACTTCTTCACCCAACACAAGAAGATGAGTTCCACAGACTCACGCATACGCCGGACCGTTGGAAATGGCACCTGGAAGGGCGACGACTCCGGCAAGCCAGTAAAATCTTTGGAGACTGGTCGTGTGGTTGGCTTGAAGAAAAGACTTACTTACAAGAACGAAGCATCGGTGCACAACGGTTGTTGGATCTTGCATGAGTTCTACCTTGATCGATCACTCAGAGACAAGAAACAAAATGTGAAAGACTATGTTCTTTGTCTGCTACGAAAAAATGGTGAACCCAAAACCAAGATCGAAAAGAAGAGAAAGCAACGTGAAGAGGAAGAGGCTCTTGAAAACAATTATGCCTGTGATGATGGAGAGAACACAAACAAGAAGCAAGAAAAGTTGCTTGAGCCAAAAGCGAAGCGACAACGAAACGTTCCATCCATTGATAATGCACTAGTGCCAATGCCATCAGAAGAGGATGCATTCGCAGCTGAGTTAGAAGAGACATTGCCATGCTTTGAAGATGACAATGCACTAGTACCAATGCCATCAGCAGAGGATGCATTCGCAGCTGAGTTAGAAGAGACATTTCCATTCTTTGAAGATGATAATGCACCATCAGAAGCTGAAGCAATTGGCTTTCAAGGTGAGGAGAATTGGGGACTCCAACAGTTAGCTTCCGAGGTGCAATCAGGCCCTTCATTTGGGGATCATGGAATATTTAATCCACTACCAAAGGAAGATTTTCTCTTGGCGGAAATGGTAGAACAAATGGGTATGGTAGAAATGGAAGACCTGCTAGTTGTTAATGGTGCGACTAGTAATTTGGAAGTGGCGGAAGAAAACGTGCTAAACAACACCCTTCTTCACACTCCCGCATCATCCTTGTCTGCGGCCTATGATGGCACTGATATGCCATATTTATCCATGGAAAATGGTTGCACTGATCCAGCTGGAAGCAGCAATGTTTGTGGAGGATCGATTGGCTTTCAGGATGATGCGTACTGGCCTGAGTCTTTAGTGGAGGTCCTTACTGAAGAGCAACAAAAGACAGCTGATGGAGATTGTTCAGATTGGTTGGAGTCAATCAATTTTGGTCTTGAGGAAAACAACTTCCTTTGGAGTGAAGTGCAATGGTGTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

457

Amino Acids

51.77

Weight (kDa)

4.49

Isoelectric Point (pI)

57.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 16 - 148 1.3e-23 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1032
AccB1I GGYRCC 2 cut(s) 121, 308
AccBSI CCGCTC 1 cut(s) 111
AciI CCGC 5 cut(s) 111, 983, 1064, 1104, 1121
AclI AACGTT 1 cut(s) 660
AclWI GGATC 4 cut(s) 434, 945, 1169, 1213
AcuI CTGAAG 2 cut(s) 876, 1284
AfaI GTAC 2 cut(s) 768, 1232
AfiI CCNNNNNNNGG 2 cut(s) 70, 932
AflII CTTAAG 1 cut(s) 95
AgsI TTSAA 5 cut(s) 376, 575, 749, 830, 872
AhlI ACTAGT 4 cut(s) 79, 682, 763, 1046
AjnI CCWGG 2 cut(s) 46, 311
AluBI AGCT 6 cut(s) 719, 800, 854, 905, 1181, 1283
AluI AGCT 6 cut(s) 719, 800, 854, 905, 1181, 1283
Alw21I GWGCWC 1 cut(s) 414
Alw26I GTCTC 4 cut(s) 347, 456, 725, 806
Alw44I GTGCAC 1 cut(s) 410
AlwI GGATC 4 cut(s) 434, 945, 1169, 1213
AlwNI CAGNNNCTG 1 cut(s) 854
AoxI GGCC 4 cut(s) 192, 922, 1122, 1235
ApaLI GTGCAC 1 cut(s) 410
ApeKI GCWGC 4 cut(s) 4, 716, 797, 1188
ArsI GACNNNNNNTTYG 2 cut(s) 1036, 1068
Asp700I GAANNNNTTC 2 cut(s) 81, 972
AspS9I GGNCC 3 cut(s) 294, 923, 1255
AsuC2I CCSGG 1 cut(s) 126
AsuHPI GGTGA 3 cut(s) 241, 527, 887
AvaII GGWCC 2 cut(s) 294, 1255
BaeGI GKGCMC 2 cut(s) 126, 414
BanI GGYRCC 2 cut(s) 121, 308
BbsI GAAGAC 2 cut(s) 214, 1026
Bbv12I GWGCWC 1 cut(s) 414
BbvI GCAGC 4 cut(s) 16, 728, 809, 1200
BccI CCATC 7 cut(s) 590, 673, 703, 784, 853, 1124, 1280
BciT130I CCWGG 2 cut(s) 48, 313
BcnI CCSGG 1 cut(s) 126
BcoDI GTCTC 4 cut(s) 347, 456, 725, 806
BcuI ACTAGT 4 cut(s) 79, 682, 763, 1046
BfaI CTAG 5 cut(s) 80, 683, 764, 1028, 1047
BfrI CTTAAG 1 cut(s) 95
BfuAI ACCTGC 1 cut(s) 1032
BisI GCNGC 5 cut(s) 5, 717, 798, 1122, 1189
BlsI GCNGC 5 cut(s) 6, 718, 799, 1123, 1190
Bme1390I CCNGG 3 cut(s) 48, 126, 313
Bme18I GGWCC 2 cut(s) 294, 1255
BmgT120I GGNCC 3 cut(s) 294, 923, 1255
BmiI GGNNCC 2 cut(s) 123, 310
BmrFI CCNGG 3 cut(s) 48, 126, 313
BmsI GCATC 5 cut(s) 413, 697, 778, 1115, 1216
BpiI GAAGAC 2 cut(s) 214, 1026
BpmI CTGGAG 1 cut(s) 69
BpuEI CTTGAG 4 cut(s) 127, 241, 653, 1349
BpuMI CCSGG 1 cut(s) 126
Bsa29I ATCGAT 2 cut(s) 451, 1208
BsaJI CCNNGG 4 cut(s) 66, 176, 909, 1155
BsaXI ACNNNNNCTCC 2 cut(s) 105, 135
Bsc4I CCNNNNNNNGG 2 cut(s) 70, 932
Bse1I ACTGG 3 cut(s) 338, 361, 1238
Bse3DI GCAATG 4 cut(s) 24, 734, 1198, 1367
BseBI CCWGG 2 cut(s) 48, 313
BseCI ATCGAT 2 cut(s) 451, 1208
BseDI CCNNGG 4 cut(s) 66, 176, 909, 1155
BseGI GGATG 5 cut(s) 665, 712, 793, 1109, 1228
BseLI CCNNNNNNNGG 2 cut(s) 70, 932
BseMI GCAATG 4 cut(s) 24, 734, 1198, 1367
BseMII CTCAG 4 cut(s) 472, 711, 792, 1230
BseNI ACTGG 3 cut(s) 338, 361, 1238
BseRI GAGGAG 2 cut(s) 38, 893
BseSI GKGCMC 2 cut(s) 126, 414
BseXI GCAGC 4 cut(s) 16, 728, 809, 1200
Bsh1285I CGRYCG 1 cut(s) 166
BshFI GGCC 4 cut(s) 194, 924, 1124, 1237
BshNI GGYRCC 2 cut(s) 121, 308
BshVI ATCGAT 2 cut(s) 451, 1208
BsiEI CGRYCG 1 cut(s) 166
BsiHKAI GWGCWC 1 cut(s) 414
BsiSI CCGG 3 cut(s) 126, 292, 330
BslFI GGGAC 1 cut(s) 903
BslI CCNNNNNNNGG 2 cut(s) 70, 932
BsmAI GTCTC 4 cut(s) 347, 456, 725, 806
BsmFI GGGAC 1 cut(s) 903
BsmI GAATGC 2 cut(s) 710, 791
BsnI GGCC 4 cut(s) 194, 924, 1124, 1237
Bsp1286I GDGCHC 2 cut(s) 126, 414
Bsp143I GATC 7 cut(s) 426, 448, 452, 531, 937, 1174, 1205
Bsp19I CCATGG 2 cut(s) 66, 1155
BspACI CCGC 5 cut(s) 111, 983, 1064, 1104, 1121
BspANI GGCC 4 cut(s) 194, 924, 1124, 1237
BspCNI CTCAG 4 cut(s) 471, 712, 793, 1231
BspDI ATCGAT 2 cut(s) 451, 1208
BspLI GGNNCC 2 cut(s) 123, 310
BspMI ACCTGC 1 cut(s) 1032
BspPI GGATC 4 cut(s) 434, 945, 1169, 1213
BspQI GCTCTTC 1 cut(s) 1260
BspT107I GGYRCC 2 cut(s) 121, 308
BspTI CTTAAG 1 cut(s) 95
BsrBI CCGCTC 1 cut(s) 111
BsrDI GCAATG 4 cut(s) 24, 734, 1198, 1367
BsrI ACTGG 3 cut(s) 338, 361, 1238
BssECI CCNNGG 4 cut(s) 66, 176, 909, 1155
BssMI GATC 7 cut(s) 426, 448, 452, 531, 937, 1174, 1205
BssT1I CCWWGG 3 cut(s) 66, 176, 1155
Bst2UI CCWGG 2 cut(s) 48, 313
Bst4CI ACNGT 4 cut(s) 164, 298, 419, 900
Bst6I CTCTTC 8 cut(s) 92, 536, 552, 558, 696, 723, 804, 1260
BstAFI CTTAAG 1 cut(s) 95
BstAPI GCANNNNNTGC 1 cut(s) 788
BstC8I GCNNGC 1 cut(s) 335
BstDEI CTNAG 4 cut(s) 458, 720, 801, 1239
BstDSI CCRYGG 2 cut(s) 66, 1155
BstF5I GGATG 5 cut(s) 665, 712, 793, 1109, 1228
BstKTI GATC 7 cut(s) 429, 451, 455, 534, 940, 1177, 1208
BstMAI GTCTC 4 cut(s) 347, 456, 725, 806
BstMBI GATC 7 cut(s) 426, 448, 452, 531, 937, 1174, 1205
BstMCI CGRYCG 1 cut(s) 166
BstMWI GCNNNNNNNGC 4 cut(s) 135, 716, 788, 797
BstNI CCWGG 2 cut(s) 48, 313
BstSCI CCNGG 3 cut(s) 46, 124, 311
BstSLI GKGCMC 2 cut(s) 126, 414
BstV1I GCAGC 4 cut(s) 16, 728, 809, 1200
BstV2I GAAGAC 2 cut(s) 214, 1026
BstX2I RGATCY 1 cut(s) 426
BstYI RGATCY 1 cut(s) 426
Bsu15I ATCGAT 2 cut(s) 451, 1208
BsuRI GGCC 4 cut(s) 194, 924, 1124, 1237
BsuTUI ATCGAT 2 cut(s) 451, 1208
BtgI CCRYGG 2 cut(s) 66, 1155
BtsCI GGATG 5 cut(s) 665, 712, 793, 1109, 1228
BtsIMutI CAGTG 2 cut(s) 1134, 1170
BveI ACCTGC 1 cut(s) 1032
Cac8I GCNNGC 1 cut(s) 335
CaiI CAGNNNCTG 1 cut(s) 854
Cfr13I GGNCC 3 cut(s) 294, 923, 1255
ClaI ATCGAT 2 cut(s) 451, 1208
CpoI CGGWCCG 1 cut(s) 294
Csp6I GTAC 2 cut(s) 767, 1231
CspCI CAANNNNNGTGG 2 cut(s) 1180, 1215
CspI CGGWCCG 1 cut(s) 294
CviAII CATG 5 cut(s) 67, 434, 741, 941, 1156
CviQI GTAC 2 cut(s) 767, 1231
DdeI CTNAG 4 cut(s) 458, 720, 801, 1239
DpnI GATC 7 cut(s) 428, 450, 454, 533, 939, 1176, 1207
DpnII GATC 7 cut(s) 426, 448, 452, 531, 937, 1174, 1205
Eam1104I CTCTTC 8 cut(s) 92, 536, 552, 558, 696, 723, 804, 1260
EarI CTCTTC 8 cut(s) 92, 536, 552, 558, 696, 723, 804, 1260
EciI GGCGGA 2 cut(s) 998, 1079
Eco130I CCWWGG 3 cut(s) 66, 176, 1155
Eco147I AGGCCT 1 cut(s) 194
Eco47I GGWCC 2 cut(s) 294, 1255
Eco57I CTGAAG 2 cut(s) 876, 1284
EcoO109I RGGNCCY 2 cut(s) 923, 1255
EcoRII CCWGG 2 cut(s) 46, 311
EcoT14I CCWWGG 3 cut(s) 66, 176, 1155
EcoT22I ATGCAT 2 cut(s) 712, 793
ErhI CCWWGG 3 cut(s) 66, 176, 1155
FaeI CATG 5 cut(s) 70, 437, 744, 944, 1159
FalI AAGNNNNNCTT 6 cut(s) 89, 121, 373, 405, 555, 587
FaqI GGGAC 1 cut(s) 903
FatI CATG 5 cut(s) 66, 433, 740, 940, 1155
FauI CCCGC 1 cut(s) 1111
Fnu4HI GCNGC 5 cut(s) 5, 717, 798, 1122, 1189
FokI GGATG 5 cut(s) 652, 719, 800, 1096, 1235
Fsp4HI GCNGC 5 cut(s) 5, 717, 798, 1122, 1189
FspBI CTAG 5 cut(s) 80, 683, 764, 1028, 1047
GluI GCNGC 5 cut(s) 5, 717, 798, 1122, 1189
GsuI CTGGAG 1 cut(s) 69
HaeIII GGCC 4 cut(s) 194, 924, 1124, 1237
HapII CCGG 3 cut(s) 126, 292, 330
Hin1II CATG 5 cut(s) 70, 437, 744, 944, 1159
HinfI GANTC 5 cut(s) 278, 326, 891, 1241, 1310
HpaII CCGG 3 cut(s) 126, 292, 330
HphI GGTGA 3 cut(s) 241, 527, 887
Hpy166II GTNNAC 2 cut(s) 412, 518
Hpy188I TCNGA 5 cut(s) 461, 700, 850, 910, 1300
Hpy188III TCNNGA 4 cut(s) 106, 572, 1220, 1328
Hpy8I GTNNAC 2 cut(s) 412, 518
Hpy99I CGWCG 1 cut(s) 326
HpyAV CCTTC 4 cut(s) 112, 310, 936, 1100
HpyCH4III ACNGT 4 cut(s) 164, 298, 419, 900
HpyCH4IV ACGT 3 cut(s) 553, 660, 1074
HpyF10VI GCNNNNNNNGC 4 cut(s) 135, 716, 788, 797
HpyF3I CTNAG 4 cut(s) 458, 720, 801, 1239
HpySE526I ACGT 3 cut(s) 553, 660, 1074
Hsp92II CATG 5 cut(s) 70, 437, 744, 944, 1159
Kzo9I GATC 7 cut(s) 426, 448, 452, 531, 937, 1174, 1205
LguI GCTCTTC 1 cut(s) 1260
Lsp1109I GCAGC 4 cut(s) 16, 728, 809, 1200
LweI GCATC 5 cut(s) 413, 697, 778, 1115, 1216
MaeI CTAG 5 cut(s) 80, 683, 764, 1028, 1047
MaeII ACGT 3 cut(s) 553, 660, 1074
MalI GATC 7 cut(s) 428, 450, 454, 533, 939, 1176, 1207
MbiI CCGCTC 1 cut(s) 111
MboI GATC 7 cut(s) 426, 448, 452, 531, 937, 1174, 1205
MfeI CAATTG 1 cut(s) 861
MflI RGATCY 1 cut(s) 426
MhlI GDGCHC 2 cut(s) 126, 414
MluCI AATT 5 cut(s) 580, 861, 883, 1051, 1318
MlyI GAGTC 5 cut(s) 272, 320, 885, 1250, 1319
MmeI TCCRAC 4 cut(s) 280, 404, 919, 1287
Mph1103I ATGCAT 2 cut(s) 712, 793
MroXI GAANNNNTTC 2 cut(s) 81, 972
MseI TTAA 3 cut(s) 96, 951, 1035
MslI CAYNNNNRTG 2 cut(s) 739, 1139
MspA1I CMGCKG 4 cut(s) 719, 800, 1181, 1283
MspCI CTTAAG 1 cut(s) 95
MspI CCGG 3 cut(s) 126, 292, 330
MspR9I CCNGG 3 cut(s) 48, 126, 313
MunI CAATTG 1 cut(s) 861
Mva1269I GAATGC 2 cut(s) 710, 791
MvaI CCWGG 2 cut(s) 48, 313
MwoI GCNNNNNNNGC 4 cut(s) 135, 716, 788, 797
NciI CCSGG 1 cut(s) 126
NcoI CCATGG 2 cut(s) 66, 1155
NdeII GATC 7 cut(s) 426, 448, 452, 531, 937, 1174, 1205
NlaIII CATG 5 cut(s) 70, 437, 744, 944, 1159
NlaIV GGNNCC 2 cut(s) 123, 310
NsiI ATGCAT 2 cut(s) 712, 793
PceI AGGCCT 1 cut(s) 194
PciSI GCTCTTC 1 cut(s) 1260
PctI GAATGC 2 cut(s) 710, 791
PdmI GAANNNNTTC 2 cut(s) 81, 972
PfoI TCCNGGA 1 cut(s) 46
PkrI GCNGC 5 cut(s) 6, 718, 799, 1123, 1190
PleI GAGTC 5 cut(s) 272, 320, 885, 1249, 1318
PpsI GAGTC 5 cut(s) 272, 320, 885, 1249, 1318
PpuMI RGGWCCY 1 cut(s) 1255
Psp1406I AACGTT 1 cut(s) 660
Psp5II RGGWCCY 1 cut(s) 1255
Psp6I CCWGG 2 cut(s) 46, 311
PspGI CCWGG 2 cut(s) 46, 311
PspN4I GGNNCC 2 cut(s) 123, 310
PspPI GGNCC 3 cut(s) 294, 923, 1255
PspPPI RGGWCCY 1 cut(s) 1255
PstNI CAGNNNCTG 1 cut(s) 854
PsuI RGATCY 1 cut(s) 426
PvuII CAGCTG 4 cut(s) 719, 800, 1181, 1283
RsaI GTAC 2 cut(s) 768, 1232
RsaNI GTAC 2 cut(s) 767, 1231
RseI CAYNNNNRTG 2 cut(s) 739, 1139
Rsr2I CGGWCCG 1 cut(s) 294
RsrII CGGWCCG 1 cut(s) 294
SapI GCTCTTC 1 cut(s) 1260
SaqAI TTAA 3 cut(s) 96, 951, 1035
SatI GCNGC 5 cut(s) 5, 717, 798, 1122, 1189
Sau3AI GATC 7 cut(s) 426, 448, 452, 531, 937, 1174, 1205
Sau96I GGNCC 3 cut(s) 294, 923, 1255
SchI GAGTC 5 cut(s) 272, 320, 885, 1250, 1319
ScrFI CCNGG 3 cut(s) 48, 126, 313
SduI GDGCHC 2 cut(s) 126, 414
SfaNI GCATC 5 cut(s) 413, 697, 778, 1115, 1216
SinI GGWCC 2 cut(s) 294, 1255
SmiMI CAYNNNNRTG 2 cut(s) 739, 1139
SmlI CTYRAG 5 cut(s) 95, 106, 220, 632, 1328
SmoI CTYRAG 5 cut(s) 95, 106, 220, 632, 1328
SpeI ACTAGT 4 cut(s) 79, 682, 763, 1046
Sse9I AATT 5 cut(s) 580, 861, 883, 1051, 1318
SseBI AGGCCT 1 cut(s) 194
SsiI CCGC 5 cut(s) 111, 983, 1064, 1104, 1121
SspI AATATT 1 cut(s) 948
SspMI CTAG 5 cut(s) 80, 683, 764, 1028, 1047
StuI AGGCCT 1 cut(s) 194
StyD4I CCNGG 3 cut(s) 46, 124, 311
StyI CCWWGG 3 cut(s) 66, 176, 1155
TaaI ACNGT 4 cut(s) 164, 298, 419, 900
TaiI ACGT 3 cut(s) 556, 663, 1077
TaqI TCGA 4 cut(s) 147, 451, 534, 1208
TasI AATT 5 cut(s) 580, 861, 883, 1051, 1318
TauI GCSGC 1 cut(s) 1124
Tru1I TTAA 3 cut(s) 96, 951, 1035
Tru9I TTAA 3 cut(s) 96, 951, 1035
TscAI CASTG 2 cut(s) 1141, 1177
TseI GCWGC 4 cut(s) 4, 716, 797, 1188
TspDTI ATGAA 1 cut(s) 918
TspRI CASTG 2 cut(s) 1141, 1177
Vha464I CTTAAG 1 cut(s) 95
VneI GTGCAC 1 cut(s) 410
VpaK11BI GGWCC 2 cut(s) 294, 1255
XmnI GAANNNNTTC 2 cut(s) 81, 972
XspI CTAG 5 cut(s) 80, 683, 764, 1028, 1047
Zsp2I ATGCAT 2 cut(s) 712, 793
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.