Mitogen-activated protein kinase kinase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-C17orf113 | PF25431 | 111 - 174 | 1.6e-25 | C17orf113 probable zinc finger |
| ELFV_dehydrog_N | PF02812 | 242 - 369 | 3.5e-44 | Glu/Leu/Phe/Val dehydrogenase, dimerisation domain |
| ELFV_dehydrog | PF00208 | 393 - 640 | 1.9e-65 | Glutamate/Leucine/Phenylalanine/Valine dehydrogenase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 929 |
| AatII | GACGTC | 1 cut(s) | 1111 |
| Acc36I | ACCTGC | 1 cut(s) | 929 |
| Acc65I | GGTACC | 1 cut(s) | 1129 |
| AccB1I | GGYRCC | 1 cut(s) | 1129 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 817 |
| AccBSI | CCGCTC | 1 cut(s) | 712 |
| AccI | GTMKAC | 1 cut(s) | 1594 |
| AccII | CGCG | 1 cut(s) | 1523 |
| AciI | CCGC | 5 cut(s) | 18, 712, 1284, 1376, 1754 |
| AclWI | GGATC | 9 cut(s) | 28, 52, 134, 592, 608, 621, 950, 1800, 1920 |
| AcsI | RAATTY | 2 cut(s) | 685, 1712 |
| AcuI | CTGAAG | 3 cut(s) | 494, 1035, 1215 |
| AcyI | GRCGYC | 1 cut(s) | 1108 |
| AfaI | GTAC | 6 cut(s) | 398, 801, 920, 1131, 1624, 1863 |
| AfeI | AGCGCT | 1 cut(s) | 1821 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 17, 167, 336, 514, 817, 830 |
| AflIII | ACRYGT | 1 cut(s) | 778 |
| AgsI | TTSAA | 6 cut(s) | 596, 890, 1362, 1611, 1718, 1723 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1765 |
| AhlI | ACTAGT | 1 cut(s) | 1597 |
| AjnI | CCWGG | 3 cut(s) | 810, 1174, 1311 |
| Alw21I | GWGCWC | 2 cut(s) | 463, 1339 |
| Alw26I | GTCTC | 3 cut(s) | 67, 767, 1443 |
| Alw44I | GTGCAC | 1 cut(s) | 459 |
| AlwI | GGATC | 9 cut(s) | 28, 52, 134, 592, 608, 621, 950, 1800, 1920 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1355, 1634, 1682 |
| Ama87I | CYCGRG | 3 cut(s) | 1074, 1470, 1850 |
| Aor51HI | AGCGCT | 1 cut(s) | 1821 |
| AoxI | GGCC | 3 cut(s) | 516, 1157, 1172 |
| ApaLI | GTGCAC | 1 cut(s) | 459 |
| ApeKI | GCWGC | 4 cut(s) | 599, 935, 1682, 1817 |
| ApoI | RAATTY | 2 cut(s) | 685, 1712 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 654 |
| Asp718I | GGTACC | 1 cut(s) | 1129 |
| AspLEI | GCGC | 2 cut(s) | 507, 1822 |
| AspS9I | GGNCC | 5 cut(s) | 125, 173, 821, 1042, 1157 |
| AsuC2I | CCSGG | 1 cut(s) | 129 |
| AsuHPI | GGTGA | 4 cut(s) | 782, 906, 994, 1743 |
| AsuII | TTCGAA | 1 cut(s) | 1457 |
| AvaI | CYCGRG | 3 cut(s) | 1074, 1470, 1850 |
| AvaII | GGWCC | 4 cut(s) | 125, 173, 821, 1042 |
| BaeGI | GKGCMC | 1 cut(s) | 463 |
| BamHI | GGATCC | 1 cut(s) | 613 |
| BanI | GGYRCC | 1 cut(s) | 1129 |
| BauI | CACGAG | 1 cut(s) | 180 |
| Bbv12I | GWGCWC | 2 cut(s) | 463, 1339 |
| BbvI | GCAGC | 4 cut(s) | 586, 947, 1669, 1829 |
| BccI | CCATC | 3 cut(s) | 34, 300, 1054 |
| BceAI | ACGGC | 2 cut(s) | 594, 1603 |
| BciT130I | CCWGG | 3 cut(s) | 812, 1176, 1313 |
| BclI | TGATCA | 2 cut(s) | 250, 1552 |
| BcnI | CCSGG | 1 cut(s) | 129 |
| BcoDI | GTCTC | 3 cut(s) | 67, 767, 1443 |
| BcuI | ACTAGT | 1 cut(s) | 1597 |
| BfaI | CTAG | 4 cut(s) | 369, 1112, 1182, 1598 |
| BfmI | CTRYAG | 3 cut(s) | 826, 1674, 1775 |
| BfoI | RGCGCY | 1 cut(s) | 1823 |
| BfuAI | ACCTGC | 1 cut(s) | 929 |
| BglII | AGATCT | 1 cut(s) | 1014 |
| BisI | GCNGC | 5 cut(s) | 600, 936, 1285, 1683, 1818 |
| BlsI | GCNGC | 5 cut(s) | 601, 937, 1286, 1684, 1819 |
| Bme1390I | CCNGG | 4 cut(s) | 129, 812, 1176, 1313 |
| Bme18I | GGWCC | 4 cut(s) | 125, 173, 821, 1042 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1765 |
| BmeT110I | CYCGRG | 3 cut(s) | 1074, 1470, 1850 |
| BmgT120I | GGNCC | 5 cut(s) | 125, 173, 821, 1042, 1157 |
| BmiI | GGNNCC | 5 cut(s) | 615, 822, 823, 1131, 1158 |
| BmrFI | CCNGG | 4 cut(s) | 129, 812, 1176, 1313 |
| BmrI | ACTGGG | 1 cut(s) | 1151 |
| BmsI | GCATC | 2 cut(s) | 975, 1552 |
| BmuI | ACTGGG | 1 cut(s) | 1151 |
| BpmI | CTGGAG | 2 cut(s) | 1334, 1728 |
| Bpu14I | TTCGAA | 1 cut(s) | 1457 |
| BpuEI | CTTGAG | 3 cut(s) | 485, 883, 1884 |
| BpuMI | CCSGG | 1 cut(s) | 129 |
| BsaBI | GATNNNNATC | 2 cut(s) | 138, 954 |
| BsaHI | GRCGYC | 1 cut(s) | 1108 |
| BsaJI | CCNNGG | 7 cut(s) | 128, 241, 522, 752, 787, 1160, 1499 |
| BsaWI | WCCGGW | 1 cut(s) | 10 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 701, 731 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 17, 167, 336, 514, 817, 830 |
| Bse118I | RCCGGY | 1 cut(s) | 274 |
| Bse1I | ACTGG | 3 cut(s) | 1146, 1207, 1751 |
| Bse3DI | GCAATG | 1 cut(s) | 1301 |
| Bse8I | GATNNNNATC | 2 cut(s) | 138, 954 |
| BseBI | CCWGG | 3 cut(s) | 812, 1176, 1313 |
| BseDI | CCNNGG | 7 cut(s) | 128, 241, 522, 752, 787, 1160, 1499 |
| BseGI | GGATG | 5 cut(s) | 49, 139, 766, 847, 1384 |
| BseJI | GATNNNNATC | 2 cut(s) | 138, 954 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 17, 167, 336, 514, 817, 830 |
| BseMI | GCAATG | 1 cut(s) | 1301 |
| BseMII | CTCAG | 2 cut(s) | 717, 1406 |
| BseNI | ACTGG | 3 cut(s) | 1146, 1207, 1751 |
| BseRI | GAGGAG | 1 cut(s) | 1070 |
| BseSI | GKGCMC | 1 cut(s) | 463 |
| BseXI | GCAGC | 4 cut(s) | 586, 947, 1669, 1829 |
| BsgI | GTGCAG | 2 cut(s) | 585, 665 |
| Bsh1236I | CGCG | 1 cut(s) | 1523 |
| BshFI | GGCC | 3 cut(s) | 518, 1159, 1174 |
| BshNI | GGYRCC | 1 cut(s) | 1129 |
| BsiHKAI | GWGCWC | 2 cut(s) | 463, 1339 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1074, 1470, 1850 |
| BsiSI | CCGG | 3 cut(s) | 11, 128, 275 |
| BslFI | GGGAC | 3 cut(s) | 376, 807, 1833 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 17, 167, 336, 514, 817, 830 |
| BsmAI | GTCTC | 3 cut(s) | 67, 767, 1443 |
| BsmFI | GGGAC | 3 cut(s) | 376, 807, 1833 |
| BsmI | GAATGC | 1 cut(s) | 910 |
| BsnI | GGCC | 3 cut(s) | 518, 1159, 1174 |
| BsoBI | CYCGRG | 3 cut(s) | 1074, 1470, 1850 |
| Bsp119I | TTCGAA | 1 cut(s) | 1457 |
| Bsp1286I | GDGCHC | 2 cut(s) | 463, 1339 |
| Bsp1407I | TGTACA | 1 cut(s) | 1622 |
| Bsp19I | CCATGG | 1 cut(s) | 752 |
| BspACI | CCGC | 5 cut(s) | 18, 712, 1284, 1376, 1754 |
| BspANI | GGCC | 3 cut(s) | 518, 1159, 1174 |
| BspCNI | CTCAG | 2 cut(s) | 718, 1407 |
| BspFNI | CGCG | 1 cut(s) | 1523 |
| BspHI | TCATGA | 1 cut(s) | 247 |
| BspLI | GGNNCC | 5 cut(s) | 615, 822, 823, 1131, 1158 |
| BspMAI | CTGCAG | 1 cut(s) | 1678 |
| BspMI | ACCTGC | 1 cut(s) | 929 |
| BspPI | GGATC | 9 cut(s) | 28, 52, 134, 592, 608, 621, 950, 1800, 1920 |
| BspQI | GCTCTTC | 1 cut(s) | 1344 |
| BspT104I | TTCGAA | 1 cut(s) | 1457 |
| BspT107I | GGYRCC | 1 cut(s) | 1129 |
| BsrBI | CCGCTC | 1 cut(s) | 712 |
| BsrDI | GCAATG | 1 cut(s) | 1301 |
| BsrFI | RCCGGY | 1 cut(s) | 274 |
| BsrGI | TGTACA | 1 cut(s) | 1622 |
| BsrI | ACTGG | 3 cut(s) | 1146, 1207, 1751 |
| BssAI | RCCGGY | 1 cut(s) | 274 |
| BssECI | CCNNGG | 7 cut(s) | 128, 241, 522, 752, 787, 1160, 1499 |
| BssNAI | GTATAC | 1 cut(s) | 1595 |
| BssNI | GRCGYC | 1 cut(s) | 1108 |
| BssSI | CACGAG | 1 cut(s) | 180 |
| BssT1I | CCWWGG | 4 cut(s) | 522, 752, 1160, 1499 |
| Bst1107I | GTATAC | 1 cut(s) | 1595 |
| Bst2BI | CACGAG | 1 cut(s) | 180 |
| Bst2UI | CCWGG | 3 cut(s) | 812, 1176, 1313 |
| Bst4CI | ACNGT | 3 cut(s) | 401, 918, 1351 |
| Bst6I | CTCTTC | 1 cut(s) | 1344 |
| BstACI | GRCGYC | 1 cut(s) | 1108 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1334, 1682 |
| BstAUI | TGTACA | 1 cut(s) | 1622 |
| BstBI | TTCGAA | 1 cut(s) | 1457 |
| BstC8I | GCNNGC | 2 cut(s) | 66, 1239 |
| BstDEI | CTNAG | 5 cut(s) | 726, 1415, 1476, 1646, 1770 |
| BstDSI | CCRYGG | 2 cut(s) | 241, 752 |
| BstEII | GGTNACC | 1 cut(s) | 1749 |
| BstF5I | GGATG | 5 cut(s) | 49, 139, 766, 847, 1384 |
| BstFNI | CGCG | 1 cut(s) | 1523 |
| BstH2I | RGCGCY | 1 cut(s) | 1823 |
| BstHHI | GCGC | 2 cut(s) | 507, 1822 |
| BstMAI | GTCTC | 3 cut(s) | 67, 767, 1443 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 275, 1334, 1682, 1688 |
| BstNI | CCWGG | 3 cut(s) | 812, 1176, 1313 |
| BstNSI | RCATGY | 2 cut(s) | 782, 1310 |
| BstPI | GGTNACC | 1 cut(s) | 1749 |
| BstSCI | CCNGG | 4 cut(s) | 127, 810, 1174, 1311 |
| BstSFI | CTRYAG | 3 cut(s) | 826, 1674, 1775 |
| BstSLI | GKGCMC | 1 cut(s) | 463 |
| BstUI | CGCG | 1 cut(s) | 1523 |
| BstV1I | GCAGC | 4 cut(s) | 586, 947, 1669, 1829 |
| BstX2I | RGATCY | 3 cut(s) | 613, 1014, 1805 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1573 |
| BstYI | RGATCY | 3 cut(s) | 613, 1014, 1805 |
| BstZ17I | GTATAC | 1 cut(s) | 1595 |
| BsuRI | GGCC | 3 cut(s) | 518, 1159, 1174 |
| BtgI | CCRYGG | 2 cut(s) | 241, 752 |
| BtsCI | GGATG | 5 cut(s) | 49, 139, 766, 847, 1384 |
| BtsI | GCAGTG | 2 cut(s) | 500, 1683 |
| BtsIMutI | CAGTG | 7 cut(s) | 30, 500, 602, 1139, 1191, 1683, 1746 |
| BveI | ACCTGC | 1 cut(s) | 929 |
| Cac8I | GCNNGC | 2 cut(s) | 66, 1239 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1355, 1634, 1682 |
| CciI | TCATGA | 1 cut(s) | 247 |
| CfoI | GCGC | 2 cut(s) | 507, 1822 |
| Cfr10I | RCCGGY | 1 cut(s) | 274 |
| Cfr13I | GGNCC | 5 cut(s) | 125, 173, 821, 1042, 1157 |
| Csp6I | GTAC | 6 cut(s) | 397, 800, 919, 1130, 1623, 1862 |
| CviQI | GTAC | 6 cut(s) | 397, 800, 919, 1130, 1623, 1862 |
| DdeI | CTNAG | 5 cut(s) | 726, 1415, 1476, 1646, 1770 |
| DraI | TTTAAA | 1 cut(s) | 1261 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1765 |
| Eam1104I | CTCTTC | 1 cut(s) | 1344 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1765 |
| EarI | CTCTTC | 1 cut(s) | 1344 |
| EciI | GGCGGA | 1 cut(s) | 1391 |
| Eco130I | CCWWGG | 4 cut(s) | 522, 752, 1160, 1499 |
| Eco32I | GATATC | 1 cut(s) | 1088 |
| Eco47I | GGWCC | 4 cut(s) | 125, 173, 821, 1042 |
| Eco47III | AGCGCT | 1 cut(s) | 1821 |
| Eco57I | CTGAAG | 3 cut(s) | 494, 1035, 1215 |
| Eco88I | CYCGRG | 3 cut(s) | 1074, 1470, 1850 |
| Eco91I | GGTNACC | 1 cut(s) | 1749 |
| EcoO109I | RGGNCCY | 2 cut(s) | 821, 1042 |
| EcoO65I | GGTNACC | 1 cut(s) | 1749 |
| EcoRII | CCWGG | 3 cut(s) | 810, 1174, 1311 |
| EcoRV | GATATC | 1 cut(s) | 1088 |
| EcoT14I | CCWWGG | 4 cut(s) | 522, 752, 1160, 1499 |
| ErhI | CCWWGG | 4 cut(s) | 522, 752, 1160, 1499 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 892, 924, 1806, 1838 |
| FaqI | GGGAC | 3 cut(s) | 376, 807, 1833 |
| FauNDI | CATATG | 2 cut(s) | 1330, 1465 |
| FbaI | TGATCA | 2 cut(s) | 250, 1552 |
| FblI | GTMKAC | 1 cut(s) | 1594 |
| Fnu4HI | GCNGC | 5 cut(s) | 600, 936, 1285, 1683, 1818 |
| FokI | GGATG | 5 cut(s) | 56, 146, 773, 834, 1391 |
| Fsp4HI | GCNGC | 5 cut(s) | 600, 936, 1285, 1683, 1818 |
| FspBI | CTAG | 4 cut(s) | 369, 1112, 1182, 1598 |
| GlaI | GCGC | 2 cut(s) | 506, 1821 |
| GluI | GCNGC | 5 cut(s) | 600, 936, 1285, 1683, 1818 |
| GsuI | CTGGAG | 2 cut(s) | 1334, 1728 |
| HaeII | RGCGCY | 1 cut(s) | 1823 |
| HaeIII | GGCC | 3 cut(s) | 518, 1159, 1174 |
| HapII | CCGG | 3 cut(s) | 11, 128, 275 |
| HhaI | GCGC | 2 cut(s) | 507, 1822 |
| Hin1I | GRCGYC | 1 cut(s) | 1108 |
| Hin6I | GCGC | 2 cut(s) | 505, 1820 |
| HinP1I | GCGC | 2 cut(s) | 505, 1820 |
| HincII | GTYRAC | 2 cut(s) | 541, 784 |
| HindII | GTYRAC | 2 cut(s) | 541, 784 |
| HindIII | AAGCTT | 1 cut(s) | 1319 |
| HinfI | GANTC | 4 cut(s) | 1358, 1570, 1766, 1891 |
| HpaI | GTTAAC | 1 cut(s) | 784 |
| HpaII | CCGG | 3 cut(s) | 11, 128, 275 |
| HphI | GGTGA | 4 cut(s) | 782, 906, 994, 1743 |
| Hpy166II | GTNNAC | 8 cut(s) | 461, 541, 700, 784, 1595, 1623, 1625, 1744 |
| Hpy188I | TCNGA | 9 cut(s) | 746, 842, 1054, 1097, 1357, 1416, 1561, 1803, 1890 |
| Hpy188III | TCNNGA | 4 cut(s) | 248, 254, 1076, 1850 |
| Hpy8I | GTNNAC | 8 cut(s) | 461, 541, 700, 784, 1595, 1623, 1625, 1744 |
| HpyCH4III | ACNGT | 3 cut(s) | 401, 918, 1351 |
| HpyCH4IV | ACGT | 1 cut(s) | 1108 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 275, 1334, 1682, 1688 |
| HpyF3I | CTNAG | 5 cut(s) | 726, 1415, 1476, 1646, 1770 |
| HpySE526I | ACGT | 1 cut(s) | 1108 |
| Hsp92I | GRCGYC | 1 cut(s) | 1108 |
| HspAI | GCGC | 2 cut(s) | 505, 1820 |
| KflI | GGGWCCC | 1 cut(s) | 821 |
| KpnI | GGTACC | 1 cut(s) | 1133 |
| Ksp22I | TGATCA | 2 cut(s) | 250, 1552 |
| KspAI | GTTAAC | 1 cut(s) | 784 |
| LguI | GCTCTTC | 1 cut(s) | 1344 |
| LmnI | GCTCC | 4 cut(s) | 94, 709, 1675, 1868 |
| Lsp1109I | GCAGC | 4 cut(s) | 586, 947, 1669, 1829 |
| LweI | GCATC | 2 cut(s) | 975, 1552 |
| MaeI | CTAG | 4 cut(s) | 369, 1112, 1182, 1598 |
| MaeII | ACGT | 1 cut(s) | 1108 |
| MaeIII | GTNAC | 3 cut(s) | 912, 1345, 1749 |
| MbiI | CCGCTC | 1 cut(s) | 712 |
| MboII | GAAGA | 5 cut(s) | 116, 298, 426, 1331, 1394 |
| MfeI | CAATTG | 1 cut(s) | 588 |
| MflI | RGATCY | 3 cut(s) | 613, 1014, 1805 |
| MhlI | GDGCHC | 2 cut(s) | 463, 1339 |
| MlyI | GAGTC | 2 cut(s) | 1775, 1885 |
| MmeI | TCCRAC | 2 cut(s) | 200, 1048 |
| MroXI | GAANNNNTTC | 1 cut(s) | 654 |
| MseI | TTAA | 5 cut(s) | 783, 807, 899, 1260, 1812 |
| MspA1I | CMGCKG | 1 cut(s) | 18 |
| MspI | CCGG | 3 cut(s) | 11, 128, 275 |
| MspR9I | CCNGG | 4 cut(s) | 129, 812, 1176, 1313 |
| MunI | CAATTG | 1 cut(s) | 588 |
| Mva1269I | GAATGC | 1 cut(s) | 910 |
| MvaI | CCWGG | 3 cut(s) | 812, 1176, 1313 |
| MvnI | CGCG | 1 cut(s) | 1523 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 275, 1334, 1682, 1688 |
| NciI | CCSGG | 1 cut(s) | 129 |
| NcoI | CCATGG | 1 cut(s) | 752 |
| NdeI | CATATG | 2 cut(s) | 1330, 1465 |
| NlaIV | GGNNCC | 5 cut(s) | 615, 822, 823, 1131, 1158 |
| NmuCI | GTSAC | 2 cut(s) | 912, 1749 |
| NspI | RCATGY | 2 cut(s) | 782, 1310 |
| NspV | TTCGAA | 1 cut(s) | 1457 |
| PaeR7I | CTCGAG | 1 cut(s) | 1470 |
| PagI | TCATGA | 1 cut(s) | 247 |
| PaqCI | CACCTGC | 1 cut(s) | 929 |
| PciI | ACATGT | 1 cut(s) | 778 |
| PciSI | GCTCTTC | 1 cut(s) | 1344 |
| PctI | GAATGC | 1 cut(s) | 910 |
| PdmI | GAANNNNTTC | 1 cut(s) | 654 |
| PfeI | GAWTC | 2 cut(s) | 1358, 1570 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 817 |
| PfoI | TCCNGGA | 1 cut(s) | 1311 |
| PkrI | GCNGC | 5 cut(s) | 601, 937, 1286, 1684, 1819 |
| PleI | GAGTC | 2 cut(s) | 1774, 1885 |
| PpsI | GAGTC | 2 cut(s) | 1774, 1885 |
| PpuMI | RGGWCCY | 2 cut(s) | 821, 1042 |
| PscI | ACATGT | 1 cut(s) | 778 |
| Psp5II | RGGWCCY | 2 cut(s) | 821, 1042 |
| Psp6I | CCWGG | 3 cut(s) | 810, 1174, 1311 |
| PspEI | GGTNACC | 1 cut(s) | 1749 |
| PspGI | CCWGG | 3 cut(s) | 810, 1174, 1311 |
| PspN4I | GGNNCC | 5 cut(s) | 615, 822, 823, 1131, 1158 |
| PspPI | GGNCC | 5 cut(s) | 125, 173, 821, 1042, 1157 |
| PspPPI | RGGWCCY | 2 cut(s) | 821, 1042 |
| PspXI | VCTCGAGB | 1 cut(s) | 1470 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 732, 764 |
| PstI | CTGCAG | 1 cut(s) | 1678 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1355, 1634, 1682 |
| PsuI | RGATCY | 3 cut(s) | 613, 1014, 1805 |
| RsaI | GTAC | 6 cut(s) | 398, 801, 920, 1131, 1624, 1863 |
| RsaNI | GTAC | 6 cut(s) | 397, 800, 919, 1130, 1623, 1862 |
| SapI | GCTCTTC | 1 cut(s) | 1344 |
| SaqAI | TTAA | 5 cut(s) | 783, 807, 899, 1260, 1812 |
| SatI | GCNGC | 5 cut(s) | 600, 936, 1285, 1683, 1818 |
| Sau96I | GGNCC | 5 cut(s) | 125, 173, 821, 1042, 1157 |
| SchI | GAGTC | 2 cut(s) | 1775, 1885 |
| ScrFI | CCNGG | 4 cut(s) | 129, 812, 1176, 1313 |
| SduI | GDGCHC | 2 cut(s) | 463, 1339 |
| SfaNI | GCATC | 2 cut(s) | 975, 1552 |
| SfcI | CTRYAG | 3 cut(s) | 826, 1674, 1775 |
| Sfr274I | CTCGAG | 1 cut(s) | 1470 |
| SfuI | TTCGAA | 1 cut(s) | 1457 |
| SinI | GGWCC | 4 cut(s) | 125, 173, 821, 1042 |
| SlaI | CTCGAG | 1 cut(s) | 1470 |
| SmlI | CTYRAG | 4 cut(s) | 464, 862, 1470, 1899 |
| SmoI | CTYRAG | 4 cut(s) | 464, 862, 1470, 1899 |
| SpeI | ACTAGT | 1 cut(s) | 1597 |
| SsiI | CCGC | 5 cut(s) | 18, 712, 1284, 1376, 1754 |
| SspMI | CTAG | 4 cut(s) | 369, 1112, 1182, 1598 |
| StyD4I | CCNGG | 4 cut(s) | 127, 810, 1174, 1311 |
| StyI | CCWWGG | 4 cut(s) | 522, 752, 1160, 1499 |
| TaaI | ACNGT | 3 cut(s) | 401, 918, 1351 |
| TaiI | ACGT | 1 cut(s) | 1111 |
| TaqI | TCGA | 2 cut(s) | 1457, 1471 |
| TatI | WGTACW | 1 cut(s) | 1622 |
| TauI | GCSGC | 1 cut(s) | 1287 |
| TfiI | GAWTC | 2 cut(s) | 1358, 1570 |
| Tru1I | TTAA | 5 cut(s) | 783, 807, 899, 1260, 1812 |
| Tru9I | TTAA | 5 cut(s) | 783, 807, 899, 1260, 1812 |
| TscAI | CASTG | 7 cut(s) | 30, 507, 609, 1146, 1198, 1683, 1746 |
| TseFI | GTSAC | 2 cut(s) | 912, 1749 |
| TseI | GCWGC | 4 cut(s) | 599, 935, 1682, 1817 |
| Tsp45I | GTSAC | 2 cut(s) | 912, 1749 |
| TspGWI | ACGGA | 2 cut(s) | 230, 1925 |
| TspRI | CASTG | 7 cut(s) | 30, 507, 609, 1146, 1198, 1683, 1746 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 817 |
| VneI | GTGCAC | 1 cut(s) | 459 |
| VpaK11BI | GGWCC | 4 cut(s) | 125, 173, 821, 1042 |
| XapI | RAATTY | 2 cut(s) | 685, 1712 |
| XceI | RCATGY | 2 cut(s) | 782, 1310 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1167 |
| XhoI | CTCGAG | 1 cut(s) | 1470 |
| XmiI | GTMKAC | 1 cut(s) | 1594 |
| XmnI | GAANNNNTTC | 1 cut(s) | 654 |
| XspI | CTAG | 4 cut(s) | 369, 1112, 1182, 1598 |
| ZraI | GACGTC | 1 cut(s) | 1109 |