Rorug07G0156700
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000076
Physical Location & Seq
Forward (+)
12450027 .. 12452301
2275 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0156700.1

Sequence Viewer

Length: 705 bp
ATGGCGGCCGCATCCCTCTCCGCCTCTTCAGTCGCCGCCACAACAACCAAATCACTCCCTCACTCACTTTTCCTCTCCAATCTCCACACCTCTTCTTCTCCATCTCTCCGATTACCGGAAACCCGGCCCAGAACCAAACCCCTAGTTTGGGCCTCCGCCGGCACGGCCCTCGAGGTCGACCAAGCCCAAGCCCAAGCCCAAACCTCCGCCACCCCCTCCAAGACCTTGCCTTTCCGGGTCGGGCACGGCTTCGACCTCCACCGATTGGAGCCCGGCTACCCTCTGATCATCGGCGGCATCGACATCCCTCACGATAGAGGCTGCGAGGCTCACTCCGATGGGGATGTGTTGCTTCACTGTGTGGTGGATGCTATACTGGGAGCATTGGGCCTCCCGGATATCGGGCAGATATTCCCGGATTCGGATCCCAAGTGGCGCGGTGCGGCTTCCTCTGTCTTCATCAAAGAAGCTGTGAAATTGATGCATGAGGCAGGTTATGAAATTGGAAATTTAGACGCTACCTTGATTCTTCAAAGACCGAAACTGAGCCCACATAAGGAGGTTATGAGGGCCAACTTGGCTAAGCTGCTTGGTGCAGACCCATCTGTTGTGAATCTGAAAGCCAAGACTCATGAGAAGGTCGACAGCCTAGGAGAAAATCGTAGCATTGCAGCTCACACAGTGGTTCTTCTTATGAGGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

234

Amino Acids

24.95

Weight (kDa)

7.88

Isoelectric Point (pI)

27.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YgbB PF02542 78 - 231 8.5e-62 YgbB family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 170
Acc36I ACCTGC 1 cut(s) 482
AccB7I CCANNNNNTGG 1 cut(s) 265
AccI GTMKAC 2 cut(s) 177, 642
AccII CGCG 1 cut(s) 438
AciI CCGC 9 cut(s) 5, 9, 21, 36, 156, 207, 294, 438, 443
AclWI GGATC 2 cut(s) 419, 432
AcoI YGGCCR 1 cut(s) 6
AcsI RAATTY 1 cut(s) 508
AcuI CTGAAG 1 cut(s) 12
AdeI CACNNNGTG 2 cut(s) 361, 682
AfiI CCNNNNNNNGG 7 cut(s) 115, 147, 148, 265, 401, 421, 556
AgsI TTSAA 1 cut(s) 533
AluBI AGCT 3 cut(s) 470, 586, 674
AluI AGCT 3 cut(s) 470, 586, 674
AlwI GGATC 2 cut(s) 419, 432
Ama87I CYCGRG 1 cut(s) 170
AoxI GGCC 6 cut(s) 6, 125, 150, 165, 388, 570
ApeKI GCWGC 3 cut(s) 321, 586, 671
ApoI RAATTY 1 cut(s) 508
AspA2I CCTAGG 1 cut(s) 649
AspLEI GCGC 1 cut(s) 438
AspS9I GGNCC 5 cut(s) 126, 150, 166, 388, 570
AsuC2I CCSGG 5 cut(s) 124, 236, 273, 395, 416
AvaI CYCGRG 1 cut(s) 170
AvrII CCTAGG 1 cut(s) 649
BaeGI GKGCMC 1 cut(s) 246
BamHI GGATCC 1 cut(s) 424
BanII GRGCYC 2 cut(s) 273, 551
BbsI GAAGAC 1 cut(s) 448
BbvI GCAGC 3 cut(s) 308, 573, 683
BccI CCATC 3 cut(s) 109, 332, 610
BceAI ACGGC 2 cut(s) 180, 262
BcgI CGANNNNNNTGC 2 cut(s) 151, 185
BclI TGATCA 1 cut(s) 285
BcnI CCSGG 5 cut(s) 124, 236, 273, 395, 416
BfaI CTAG 2 cut(s) 143, 650
BfuAI ACCTGC 1 cut(s) 482
BglI GCCNNNNNGGC 2 cut(s) 164, 578
BisI GCNGC 8 cut(s) 6, 9, 36, 295, 322, 444, 587, 672
BlnI CCTAGG 1 cut(s) 649
BlpI GCTNAGC 1 cut(s) 582
BlsI GCNGC 8 cut(s) 7, 10, 37, 296, 323, 445, 588, 673
Bme1390I CCNGG 5 cut(s) 124, 236, 273, 395, 416
BmeT110I CYCGRG 1 cut(s) 170
BmgT120I GGNCC 5 cut(s) 126, 150, 166, 388, 570
BmiI GGNNCC 2 cut(s) 270, 426
BmrFI CCNGG 5 cut(s) 124, 236, 273, 395, 416
BmrI ACTGGG 1 cut(s) 386
BmsI GCATC 4 cut(s) 20, 306, 358, 471
BmuI ACTGGG 1 cut(s) 386
BpiI GAAGAC 1 cut(s) 448
BplI GAGNNNNNCTC 2 cut(s) 317, 349
Bpu1102I GCTNAGC 1 cut(s) 582
BpuMI CCSGG 5 cut(s) 124, 236, 273, 395, 416
BsaBI GATNNNNATC 1 cut(s) 423
BsaJI CCNNGG 1 cut(s) 649
BsaWI WCCGGW 1 cut(s) 115
Bsc4I CCNNNNNNNGG 7 cut(s) 115, 147, 148, 265, 401, 421, 556
Bse118I RCCGGY 1 cut(s) 158
Bse1I ACTGG 1 cut(s) 381
Bse3DI GCAATG 1 cut(s) 666
Bse8I GATNNNNATC 1 cut(s) 423
BseDI CCNNGG 1 cut(s) 649
BseGI GGATG 4 cut(s) 11, 303, 349, 373
BseJI GATNNNNATC 1 cut(s) 423
BseLI CCNNNNNNNGG 7 cut(s) 115, 147, 148, 265, 401, 421, 556
BseMI GCAATG 1 cut(s) 666
BseMII CTCAG 1 cut(s) 536
BseNI ACTGG 1 cut(s) 381
BseSI GKGCMC 1 cut(s) 246
BseX3I CGGCCG 1 cut(s) 6
BseXI GCAGC 3 cut(s) 308, 573, 683
BsgI GTGCAG 1 cut(s) 615
Bsh1236I CGCG 1 cut(s) 438
Bsh1285I CGRYCG 1 cut(s) 9
BshFI GGCC 6 cut(s) 8, 127, 152, 167, 390, 572
BsiEI CGRYCG 1 cut(s) 9
BsiHKCI CYCGRG 1 cut(s) 170
BsiSI CCGG 7 cut(s) 116, 124, 159, 235, 273, 395, 416
BslI CCNNNNNNNGG 7 cut(s) 115, 147, 148, 265, 401, 421, 556
BsnI GGCC 6 cut(s) 8, 127, 152, 167, 390, 572
BsoBI CYCGRG 1 cut(s) 170
Bsp1286I GDGCHC 3 cut(s) 246, 273, 551
Bsp143I GATC 2 cut(s) 285, 424
Bsp1720I GCTNAGC 1 cut(s) 582
BspACI CCGC 9 cut(s) 5, 9, 21, 36, 156, 207, 294, 438, 443
BspANI GGCC 6 cut(s) 8, 127, 152, 167, 390, 572
BspCNI CTCAG 1 cut(s) 537
BspFNI CGCG 1 cut(s) 438
BspHI TCATGA 1 cut(s) 631
BspLI GGNNCC 2 cut(s) 270, 426
BspMI ACCTGC 1 cut(s) 482
BspPI GGATC 2 cut(s) 419, 432
BsrDI GCAATG 1 cut(s) 666
BsrFI RCCGGY 1 cut(s) 158
BsrI ACTGG 1 cut(s) 381
BssAI RCCGGY 1 cut(s) 158
BssECI CCNNGG 1 cut(s) 649
BssMI GATC 2 cut(s) 285, 424
BssT1I CCWWGG 1 cut(s) 649
Bst4CI ACNGT 2 cut(s) 359, 682
Bst6I CTCTTC 2 cut(s) 31, 97
BstC8I GCNNGC 1 cut(s) 160
BstDEI CTNAG 2 cut(s) 545, 582
BstF5I GGATG 4 cut(s) 11, 303, 349, 373
BstFNI CGCG 1 cut(s) 438
BstHHI GCGC 1 cut(s) 438
BstKTI GATC 2 cut(s) 288, 427
BstMBI GATC 2 cut(s) 285, 424
BstMCI CGRYCG 1 cut(s) 9
BstMWI GCNNNNNNNGC 2 cut(s) 164, 578
BstSCI CCNGG 5 cut(s) 122, 234, 271, 393, 414
BstSLI GKGCMC 1 cut(s) 246
BstUI CGCG 1 cut(s) 438
BstV1I GCAGC 3 cut(s) 308, 573, 683
BstV2I GAAGAC 1 cut(s) 448
BstX2I RGATCY 1 cut(s) 424
BstYI RGATCY 1 cut(s) 424
BstZI CGGCCG 1 cut(s) 6
BsuRI GGCC 6 cut(s) 8, 127, 152, 167, 390, 572
BtsCI GGATG 4 cut(s) 11, 303, 349, 373
BtsIMutI CAGTG 2 cut(s) 355, 687
BveI ACCTGC 1 cut(s) 482
Cac8I GCNNGC 1 cut(s) 160
CciI TCATGA 1 cut(s) 631
CciNI GCGGCCGC 1 cut(s) 6
CfoI GCGC 1 cut(s) 438
Cfr10I RCCGGY 1 cut(s) 158
Cfr13I GGNCC 5 cut(s) 126, 150, 166, 388, 570
CseI GACGC 1 cut(s) 524
CviAII CATG 2 cut(s) 485, 632
DdeI CTNAG 2 cut(s) 545, 582
DpnI GATC 2 cut(s) 287, 426
DpnII GATC 2 cut(s) 285, 424
DraIII CACNNNGTG 2 cut(s) 361, 682
EaeI YGGCCR 1 cut(s) 6
EagI CGGCCG 1 cut(s) 6
Eam1104I CTCTTC 2 cut(s) 31, 97
EarI CTCTTC 2 cut(s) 31, 97
EciI GGCGGA 3 cut(s) 10, 145, 196
EclXI CGGCCG 1 cut(s) 6
Eco130I CCWWGG 1 cut(s) 649
Eco24I GRGCYC 2 cut(s) 273, 551
Eco32I GATATC 1 cut(s) 400
Eco52I CGGCCG 1 cut(s) 6
Eco57I CTGAAG 1 cut(s) 12
Eco88I CYCGRG 1 cut(s) 170
EcoRV GATATC 1 cut(s) 400
EcoT14I CCWWGG 1 cut(s) 649
EcoT22I ATGCAT 1 cut(s) 486
EcoT38I GRGCYC 2 cut(s) 273, 551
ErhI CCWWGG 1 cut(s) 649
FaeI CATG 2 cut(s) 488, 635
FaiI YATR 7 cut(s) 374, 486, 498, 555, 566, 633, 695
FatI CATG 2 cut(s) 484, 631
FbaI TGATCA 1 cut(s) 285
FblI GTMKAC 2 cut(s) 177, 642
Fnu4HI GCNGC 8 cut(s) 6, 9, 36, 295, 322, 444, 587, 672
FokI GGATG 3 cut(s) 290, 356, 380
FriOI GRGCYC 2 cut(s) 273, 551
Fsp4HI GCNGC 8 cut(s) 6, 9, 36, 295, 322, 444, 587, 672
FspBI CTAG 2 cut(s) 143, 650
GlaI GCGC 1 cut(s) 437
GluI GCNGC 8 cut(s) 6, 9, 36, 295, 322, 444, 587, 672
HaeIII GGCC 6 cut(s) 8, 127, 152, 167, 390, 572
HapII CCGG 7 cut(s) 116, 124, 159, 235, 273, 395, 416
HgaI GACGC 1 cut(s) 524
HhaI GCGC 1 cut(s) 438
Hin1II CATG 2 cut(s) 488, 635
Hin6I GCGC 1 cut(s) 436
HinP1I GCGC 1 cut(s) 436
HincII GTYRAC 2 cut(s) 178, 643
HindII GTYRAC 2 cut(s) 178, 643
HinfI GANTC 4 cut(s) 419, 526, 613, 628
HpaII CCGG 7 cut(s) 116, 124, 159, 235, 273, 395, 416
Hpy166II GTNNAC 2 cut(s) 178, 643
Hpy188I TCNGA 5 cut(s) 110, 285, 337, 424, 618
Hpy188III TCNNGA 2 cut(s) 311, 632
Hpy8I GTNNAC 2 cut(s) 178, 643
HpyAV CCTTC 1 cut(s) 631
HpyCH4III ACNGT 2 cut(s) 359, 682
HpyCH4V TGCA 3 cut(s) 484, 596, 671
HpyF10VI GCNNNNNNNGC 2 cut(s) 164, 578
HpyF3I CTNAG 2 cut(s) 545, 582
Hsp92II CATG 2 cut(s) 488, 635
HspAI GCGC 1 cut(s) 436
KroI GCCGGC 1 cut(s) 158
KroNI GCCGGC 1 cut(s) 160
Ksp22I TGATCA 1 cut(s) 285
Kzo9I GATC 2 cut(s) 285, 424
LmnI GCTCC 2 cut(s) 268, 380
Lsp1109I GCAGC 3 cut(s) 308, 573, 683
LweI GCATC 4 cut(s) 20, 306, 358, 471
MaeI CTAG 2 cut(s) 143, 650
MalI GATC 2 cut(s) 287, 426
MboI GATC 2 cut(s) 285, 424
MboII GAAGA 6 cut(s) 18, 84, 87, 448, 521, 680
MflI RGATCY 1 cut(s) 424
MhlI GDGCHC 3 cut(s) 246, 273, 551
MluCI AATT 3 cut(s) 476, 501, 508
MlyI GAGTC 1 cut(s) 622
Mph1103I ATGCAT 1 cut(s) 486
MroNI GCCGGC 1 cut(s) 158
MslI CAYNNNNRTG 1 cut(s) 336
MspI CCGG 7 cut(s) 116, 124, 159, 235, 273, 395, 416
MspR9I CCNGG 5 cut(s) 124, 236, 273, 395, 416
MvnI CGCG 1 cut(s) 438
MwoI GCNNNNNNNGC 2 cut(s) 164, 578
NaeI GCCGGC 1 cut(s) 160
NciI CCSGG 5 cut(s) 124, 236, 273, 395, 416
NdeII GATC 2 cut(s) 285, 424
NgoMIV GCCGGC 1 cut(s) 158
NlaIII CATG 2 cut(s) 488, 635
NlaIV GGNNCC 2 cut(s) 270, 426
NotI GCGGCCGC 1 cut(s) 6
NsiI ATGCAT 1 cut(s) 486
PaeR7I CTCGAG 1 cut(s) 170
PagI TCATGA 1 cut(s) 631
PcsI WCGNNNNNNNCGW 1 cut(s) 297
PdiI GCCGGC 1 cut(s) 160
PfeI GAWTC 3 cut(s) 419, 526, 613
PflMI CCANNNNNTGG 1 cut(s) 265
PfoI TCCNGGA 2 cut(s) 393, 414
PkrI GCNGC 8 cut(s) 7, 10, 37, 296, 323, 445, 588, 673
PleI GAGTC 1 cut(s) 622
PpsI GAGTC 1 cut(s) 622
PspN4I GGNNCC 2 cut(s) 270, 426
PspPI GGNCC 5 cut(s) 126, 150, 166, 388, 570
PspXI VCTCGAGB 1 cut(s) 170
PsuI RGATCY 1 cut(s) 424
RseI CAYNNNNRTG 1 cut(s) 336
SalI GTCGAC 2 cut(s) 176, 641
SatI GCNGC 8 cut(s) 6, 9, 36, 295, 322, 444, 587, 672
Sau3AI GATC 2 cut(s) 285, 424
Sau96I GGNCC 5 cut(s) 126, 150, 166, 388, 570
SchI GAGTC 1 cut(s) 622
ScrFI CCNGG 5 cut(s) 124, 236, 273, 395, 416
SduI GDGCHC 3 cut(s) 246, 273, 551
SfaNI GCATC 4 cut(s) 20, 306, 358, 471
Sfr274I CTCGAG 1 cut(s) 170
SlaI CTCGAG 1 cut(s) 170
SmiMI CAYNNNNRTG 1 cut(s) 336
SmlI CTYRAG 1 cut(s) 170
SmoI CTYRAG 1 cut(s) 170
Sse9I AATT 3 cut(s) 476, 501, 508
SsiI CCGC 9 cut(s) 5, 9, 21, 36, 156, 207, 294, 438, 443
SspMI CTAG 2 cut(s) 143, 650
StyD4I CCNGG 5 cut(s) 122, 234, 271, 393, 414
StyI CCWWGG 1 cut(s) 649
TaaI ACNGT 2 cut(s) 359, 682
TaqI TCGA 5 cut(s) 171, 177, 252, 300, 642
TaqII GACCGA 1 cut(s) 553
TasI AATT 3 cut(s) 476, 501, 508
TauI GCSGC 5 cut(s) 8, 11, 38, 297, 446
TfiI GAWTC 3 cut(s) 419, 526, 613
TscAI CASTG 2 cut(s) 362, 687
TseI GCWGC 3 cut(s) 321, 586, 671
TspDTI ATGAA 2 cut(s) 448, 513
TspRI CASTG 2 cut(s) 362, 687
Van91I CCANNNNNTGG 1 cut(s) 265
XapI RAATTY 1 cut(s) 508
XhoI CTCGAG 1 cut(s) 170
XmaJI CCTAGG 1 cut(s) 649
XmiI GTMKAC 2 cut(s) 177, 642
XspI CTAG 2 cut(s) 143, 650
Zsp2I ATGCAT 1 cut(s) 486
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.