Rorug03G0339200
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000076
Physical Location & Seq
Forward (+)
40328020 .. 40331611
3592 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0339200.1

Sequence Viewer

Length: 1377 bp
ATGGAGTCGAGCATCCTGGAGTCGATCGGCGTTGAAATCATCGGCGTAATGTCGCCGGTGTCTATCTGCATGTTCCTTGTCGTCCTTTTAGTCTACGCCCTCTCCCCCTCGAACCCTTCGTCTTCGTCGTCGATCCGGACCGCCGCAAACCTGGTGTACCTGGAGAGCCCCACCGACTCGACCTCCGAAAAGCTCGAAGGCGCCCTCCTCAACGCCCTCGTCTTCGTTATTCTCATCGCCCTCGTCACCTTCCTCCTCGTCCTCCTCTACTACTACAACTTCACTAATTTCTTGAAGAACTACATGCGCTTCTCCGCCTTCTTCGTCCTCGCCACCATGGGAGGTTCCATCTTCCTCTCCATTATCCAGCATTTCTCCATACCCATCGACTCCATCACTTGCTTTCTGCTGCTCTTCAATTTCACTCTTGTCGGCGTCTTGTCCATGTTCGCCGCTGGCATGCCTATTCTCTTGCGCCAAGCTTATATGGTCTGCTTGGGCATTATCGTCGCTGCTTGGTTCACCAAATTGCCCGAATGGACCACTTGGGTTCTGCTTGTCGCTCTCGCTCTCTATGATTTGGTAGCTGTTCTCGCCCCCGGCGGCCCCCTTAAACTCCTCGTTGAGTTGGCCTCCACCCGCGACGAGGAGCTCCCCGCTTTGGTTTATGAGGCTCGCCCCACCGTGCCCCGAAACGCGAATGCAAATGCATCCTCCTTGGGCCTTTTGGTTGCCGGGGTTTCCGATTCTGGCTCCGTTGAGCTCCAGGCTGTTTCGAGGGACAATGTGAGTCCAGGTGAGAATGGAAACCGTGCTAGTTCAGACGACAGTGTGGTTGAGGTTGACAGTTTCGCCAAGGAGGGAGGTCAAAGTAACGGAGACGAAGGGCAGAGGTTACTGCCGGTGGATAGGGCACTGGGTAGGCACTCGTCAAGCAGTGATACTTCGGAGTATTCAACTGTCAATGTTCCGTCTGATAGAGCTAGGCAGTTCGGCAGTGTAGCATCTGAAATTGTTGCGGATGAGGAGGAGATGTCTCCTCTCGTTCAAATGTCTGGATCAGGTCACGAGAGAGACGAGTTGAGAAGGGATGCTGCTGAAATGTTCAGTAGAGGTATTAAACTCGGTCTTGGTGATTTCATTTTCTACAGTGTTCTAGTGGGCAGAGCTGCAATGTATGACCTTATGACTGTGTATGCCTGTTATCTTGCCATTATTTCGGGACTTGGGTGCACTCTCATCTTGTTGTCAGTATGCCATCGAGCTTTGCCTGCTCTGCCTATATCTATTGCATTGGGTGTTATTTTTTACTTCTTGACTCGGTTATTAATGGAACCCTTTGTTGTTGGGGCAGCCACAAATTTACTGATGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

458

Amino Acids

49.45

Weight (kDa)

4.66

Isoelectric Point (pI)

46.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Presenilin PF01080 10 - 448 3.6e-128 Presenilin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 200
AccI GTMKAC 1 cut(s) 93
AccII CGCG 2 cut(s) 642, 698
AccIII TCCGGA 1 cut(s) 135
AciI CCGC 8 cut(s) 141, 144, 315, 453, 603, 640, 657, 1019
AclWI GGATC 2 cut(s) 127, 1066
AcsI RAATTY 1 cut(s) 1360
AcyI GRCGYC 2 cut(s) 201, 435
AfaI GTAC 1 cut(s) 158
AfiI CCNNNNNNNGG 2 cut(s) 646, 661
AgsI TTSAA 5 cut(s) 35, 295, 418, 957, 1049
AjnI CCWGG 5 cut(s) 15, 150, 159, 765, 793
AluBI AGCT 8 cut(s) 193, 482, 587, 652, 763, 983, 1169, 1265
AluI AGCT 8 cut(s) 193, 482, 587, 652, 763, 983, 1169, 1265
Alw21I GWGCWC 3 cut(s) 654, 765, 1235
Alw26I GTCTC 3 cut(s) 873, 1041, 1068
Alw44I GTGCAC 1 cut(s) 1231
AlwI GGATC 2 cut(s) 127, 1066
Aor13HI TCCGGA 1 cut(s) 135
AoxI GGCC 3 cut(s) 604, 630, 721
ApaLI GTGCAC 1 cut(s) 1231
ApeKI GCWGC 5 cut(s) 409, 512, 1094, 1169, 1352
ApoI RAATTY 1 cut(s) 1360
ArsI GACNNNNNNTTYG 2 cut(s) 104, 136
AseI ATTAAT 1 cut(s) 1328
AspLEI GCGC 3 cut(s) 203, 309, 477
AspS9I GGNCC 4 cut(s) 138, 540, 605, 721
AsuC2I CCSGG 2 cut(s) 600, 736
AsuHPI GGTGA 4 cut(s) 238, 514, 809, 1145
AvaII GGWCC 2 cut(s) 138, 540
BaeGI GKGCMC 3 cut(s) 690, 916, 1235
BanI GGYRCC 1 cut(s) 200
BanII GRGCYC 3 cut(s) 170, 654, 765
BauI CACGAG 1 cut(s) 1067
BbsI GAAGAC 2 cut(s) 114, 214
Bbv12I GWGCWC 3 cut(s) 654, 765, 1235
BbvI GCAGC 5 cut(s) 396, 499, 1081, 1156, 1364
BccI CCATC 4 cut(s) 356, 392, 401, 1266
BcgI CGANNNNNNTGC 2 cut(s) 490, 524
BciT130I CCWGG 5 cut(s) 17, 152, 161, 767, 795
BcnI CCSGG 2 cut(s) 600, 736
BcoDI GTCTC 3 cut(s) 873, 1041, 1068
BfaI CTAG 3 cut(s) 816, 984, 1157
BfmI CTRYAG 1 cut(s) 1147
BfoI RGCGCY 1 cut(s) 204
BisI GCNGC 8 cut(s) 144, 410, 453, 513, 604, 1095, 1170, 1353
BlsI GCNGC 8 cut(s) 145, 411, 454, 514, 605, 1096, 1171, 1354
Bme1390I CCNGG 7 cut(s) 17, 152, 161, 600, 736, 767, 795
Bme18I GGWCC 2 cut(s) 138, 540
BmgT120I GGNCC 4 cut(s) 138, 540, 605, 721
BmiI GGNNCC 5 cut(s) 202, 346, 607, 754, 1335
BmrFI CCNGG 7 cut(s) 17, 152, 161, 600, 736, 767, 795
BmrI ACTGGG 1 cut(s) 926
BmsI GCATC 4 cut(s) 21, 719, 1013, 1081
BmuI ACTGGG 1 cut(s) 926
BpiI GAAGAC 2 cut(s) 114, 214
BplI GAGNNNNNCTC 2 cut(s) 617, 649
BpmI CTGGAG 3 cut(s) 38, 182, 749
BpuMI CCSGG 2 cut(s) 600, 736
BsaHI GRCGYC 2 cut(s) 201, 435
BsaJI CCNNGG 5 cut(s) 336, 598, 717, 735, 855
BsaWI WCCGGW 1 cut(s) 135
BsaXI ACNNNNNCTCC 6 cut(s) 86, 116, 167, 197, 1019, 1049
Bsc4I CCNNNNNNNGG 2 cut(s) 646, 661
Bse118I RCCGGY 2 cut(s) 55, 901
Bse1I ACTGG 1 cut(s) 921
Bse3DI GCAATG 1 cut(s) 1179
BseAI TCCGGA 1 cut(s) 135
BseBI CCWGG 5 cut(s) 17, 152, 161, 767, 795
BseDI CCNNGG 5 cut(s) 336, 598, 717, 735, 855
BseGI GGATG 4 cut(s) 12, 710, 1027, 1096
BseLI CCNNNNNNNGG 2 cut(s) 646, 661
BseMI GCAATG 1 cut(s) 1179
BseNI ACTGG 1 cut(s) 921
BseRI GAGGAG 8 cut(s) 197, 245, 254, 608, 662, 1029, 1040, 1043
BseSI GKGCMC 3 cut(s) 690, 916, 1235
BseXI GCAGC 5 cut(s) 396, 499, 1081, 1156, 1364
Bsh1236I CGCG 2 cut(s) 642, 698
Bsh1285I CGRYCG 1 cut(s) 27
BshFI GGCC 3 cut(s) 606, 632, 723
BshNI GGYRCC 1 cut(s) 200
BsiEI CGRYCG 1 cut(s) 27
BsiHKAI GWGCWC 3 cut(s) 654, 765, 1235
BsiSI CCGG 5 cut(s) 56, 136, 600, 735, 902
BslFI GGGAC 2 cut(s) 794, 1236
BslI CCNNNNNNNGG 2 cut(s) 646, 661
BsmAI GTCTC 3 cut(s) 873, 1041, 1068
BsmBI CGTCTC 2 cut(s) 873, 1068
BsmFI GGGAC 2 cut(s) 794, 1236
BsmI GAATGC 1 cut(s) 706
BsnI GGCC 3 cut(s) 606, 632, 723
Bsp1286I GDGCHC 6 cut(s) 170, 654, 690, 765, 916, 1235
Bsp13I TCCGGA 1 cut(s) 135
Bsp143I GATC 3 cut(s) 24, 132, 1058
Bsp19I CCATGG 1 cut(s) 336
BspACI CCGC 8 cut(s) 141, 144, 315, 453, 603, 640, 657, 1019
BspANI GGCC 3 cut(s) 606, 632, 723
BspEI TCCGGA 1 cut(s) 135
BspFNI CGCG 2 cut(s) 642, 698
BspLI GGNNCC 5 cut(s) 202, 346, 607, 754, 1335
BspPI GGATC 2 cut(s) 127, 1066
BspQI GCTCTTC 1 cut(s) 419
BspT107I GGYRCC 1 cut(s) 200
BsrDI GCAATG 1 cut(s) 1179
BsrFI RCCGGY 2 cut(s) 55, 901
BsrI ACTGG 1 cut(s) 921
BssAI RCCGGY 2 cut(s) 55, 901
BssECI CCNNGG 5 cut(s) 336, 598, 717, 735, 855
BssMI GATC 3 cut(s) 24, 132, 1058
BssNI GRCGYC 2 cut(s) 201, 435
BssSI CACGAG 1 cut(s) 1067
BssT1I CCWWGG 3 cut(s) 336, 717, 855
Bst2BI CACGAG 1 cut(s) 1067
Bst2UI CCWGG 5 cut(s) 17, 152, 161, 767, 795
Bst4CI ACNGT 7 cut(s) 685, 812, 830, 848, 961, 1151, 1192
Bst6I CTCTTC 1 cut(s) 419
BstACI GRCGYC 2 cut(s) 201, 435
BstC8I GCNNGC 4 cut(s) 457, 461, 676, 1272
BstDSI CCRYGG 1 cut(s) 336
BstF5I GGATG 4 cut(s) 12, 710, 1027, 1096
BstFNI CGCG 2 cut(s) 642, 698
BstH2I RGCGCY 1 cut(s) 204
BstHHI GCGC 3 cut(s) 203, 309, 477
BstKTI GATC 3 cut(s) 27, 135, 1061
BstMAI GTCTC 3 cut(s) 873, 1041, 1068
BstMBI GATC 3 cut(s) 24, 132, 1058
BstMCI CGRYCG 1 cut(s) 27
BstMWI GCNNNNNNNGC 3 cut(s) 593, 1271, 1276
BstNI CCWGG 5 cut(s) 17, 152, 161, 767, 795
BstNSI RCATGY 3 cut(s) 73, 307, 463
BstSCI CCNGG 7 cut(s) 15, 150, 159, 598, 734, 765, 793
BstSFI CTRYAG 1 cut(s) 1147
BstSLI GKGCMC 3 cut(s) 690, 916, 1235
BstUI CGCG 2 cut(s) 642, 698
BstV1I GCAGC 5 cut(s) 396, 499, 1081, 1156, 1364
BstV2I GAAGAC 2 cut(s) 114, 214
BsuRI GGCC 3 cut(s) 606, 632, 723
BtgI CCRYGG 1 cut(s) 336
BtgZI GCGATG 1 cut(s) 220
BtsCI GGATG 4 cut(s) 12, 710, 1027, 1096
BtsI GCAGTG 2 cut(s) 943, 1003
BtsIMutI CAGTG 5 cut(s) 835, 914, 943, 1003, 1156
Cac8I GCNNGC 4 cut(s) 457, 461, 676, 1272
CfoI GCGC 3 cut(s) 203, 309, 477
Cfr10I RCCGGY 2 cut(s) 55, 901
Cfr13I GGNCC 4 cut(s) 138, 540, 605, 721
CpoI CGGWCCG 1 cut(s) 138
CseI GACGC 1 cut(s) 424
CsiI ACCWGGT 1 cut(s) 150
Csp6I GTAC 1 cut(s) 157
CspI CGGWCCG 1 cut(s) 138
CviAII CATG 5 cut(s) 70, 304, 337, 445, 460
CviQI GTAC 1 cut(s) 157
DinI GGCGCC 1 cut(s) 202
DpnI GATC 3 cut(s) 26, 134, 1060
DpnII GATC 3 cut(s) 24, 132, 1058
Eam1104I CTCTTC 1 cut(s) 419
EarI CTCTTC 1 cut(s) 419
EciI GGCGGA 1 cut(s) 304
Ecl136II GAGCTC 2 cut(s) 652, 763
Eco130I CCWWGG 3 cut(s) 336, 717, 855
Eco24I GRGCYC 3 cut(s) 170, 654, 765
Eco47I GGWCC 2 cut(s) 138, 540
Eco53kI GAGCTC 2 cut(s) 652, 763
EcoICRI GAGCTC 2 cut(s) 652, 763
EcoRII CCWGG 5 cut(s) 15, 150, 159, 765, 793
EcoT14I CCWWGG 3 cut(s) 336, 717, 855
EcoT22I ATGCAT 1 cut(s) 712
EcoT38I GRGCYC 3 cut(s) 170, 654, 765
EgeI GGCGCC 1 cut(s) 202
EheI GGCGCC 1 cut(s) 202
ErhI CCWWGG 3 cut(s) 336, 717, 855
Esp3I CGTCTC 2 cut(s) 873, 1068
FaeI CATG 5 cut(s) 73, 307, 340, 448, 463
FaqI GGGAC 2 cut(s) 794, 1236
FatI CATG 5 cut(s) 69, 303, 336, 444, 459
FauI CCCGC 2 cut(s) 647, 664
FblI GTMKAC 1 cut(s) 93
Fnu4HI GCNGC 8 cut(s) 144, 410, 453, 513, 604, 1095, 1170, 1353
FokI GGATG 3 cut(s) 697, 1034, 1103
FriOI GRGCYC 3 cut(s) 170, 654, 765
Fsp4HI GCNGC 8 cut(s) 144, 410, 453, 513, 604, 1095, 1170, 1353
FspBI CTAG 3 cut(s) 816, 984, 1157
GlaI GCGC 3 cut(s) 202, 308, 476
GluI GCNGC 8 cut(s) 144, 410, 453, 513, 604, 1095, 1170, 1353
GsuI CTGGAG 3 cut(s) 38, 182, 749
HaeII RGCGCY 1 cut(s) 204
HaeIII GGCC 3 cut(s) 606, 632, 723
HapII CCGG 5 cut(s) 56, 136, 600, 735, 902
HgaI GACGC 1 cut(s) 424
HhaI GCGC 3 cut(s) 203, 309, 477
Hin1I GRCGYC 2 cut(s) 201, 435
Hin1II CATG 5 cut(s) 73, 307, 340, 448, 463
Hin6I GCGC 3 cut(s) 201, 307, 475
HinP1I GCGC 3 cut(s) 201, 307, 475
HincII GTYRAC 1 cut(s) 844
HindII GTYRAC 1 cut(s) 844
HindIII AAGCTT 1 cut(s) 480
HinfI GANTC 7 cut(s) 5, 20, 176, 389, 746, 790, 1318
HpaII CCGG 5 cut(s) 56, 136, 600, 735, 902
HphI GGTGA 4 cut(s) 238, 514, 809, 1145
Hpy166II GTNNAC 5 cut(s) 94, 157, 522, 844, 1233
Hpy188I TCNGA 6 cut(s) 187, 745, 823, 949, 976, 1009
Hpy188III TCNNGA 6 cut(s) 136, 292, 1056, 1067, 1221, 1315
Hpy8I GTNNAC 5 cut(s) 94, 157, 522, 844, 1233
Hpy99I CGWCG 4 cut(s) 130, 133, 512, 647
HpyAV CCTTC 6 cut(s) 126, 191, 259, 328, 878, 1080
HpyCH4III ACNGT 7 cut(s) 685, 812, 830, 848, 961, 1151, 1192
HpyCH4V TGCA 6 cut(s) 69, 704, 710, 1172, 1233, 1292
HpyF10VI GCNNNNNNNGC 3 cut(s) 593, 1271, 1276
Hsp92I GRCGYC 2 cut(s) 201, 435
Hsp92II CATG 5 cut(s) 73, 307, 340, 448, 463
HspAI GCGC 3 cut(s) 201, 307, 475
KasI GGCGCC 1 cut(s) 200
Kpn2I TCCGGA 1 cut(s) 135
Kzo9I GATC 3 cut(s) 24, 132, 1058
LguI GCTCTTC 1 cut(s) 419
LmnI GCTCC 4 cut(s) 649, 657, 758, 768
Lsp1109I GCAGC 5 cut(s) 396, 499, 1081, 1156, 1364
LweI GCATC 4 cut(s) 21, 719, 1013, 1081
MabI ACCWGGT 1 cut(s) 150
MaeI CTAG 3 cut(s) 816, 984, 1157
MaeIII GTNAC 4 cut(s) 244, 872, 894, 1064
MalI GATC 3 cut(s) 26, 134, 1060
MboI GATC 3 cut(s) 24, 132, 1058
MboII GAAGA 6 cut(s) 114, 214, 307, 313, 343, 406
MhlI GDGCHC 6 cut(s) 170, 654, 690, 765, 916, 1235
MluCI AATT 5 cut(s) 286, 418, 527, 1011, 1360
Mly113I GGCGCC 1 cut(s) 201
MlyI GAGTC 6 cut(s) 14, 29, 170, 383, 799, 1312
Mph1103I ATGCAT 1 cut(s) 712
MroI TCCGGA 1 cut(s) 135
MseI TTAA 3 cut(s) 612, 1119, 1328
MspA1I CMGCKG 1 cut(s) 455
MspI CCGG 5 cut(s) 56, 136, 600, 735, 902
MspR9I CCNGG 7 cut(s) 17, 152, 161, 600, 736, 767, 795
Mva1269I GAATGC 1 cut(s) 706
MvaI CCWGG 5 cut(s) 17, 152, 161, 767, 795
MvnI CGCG 2 cut(s) 642, 698
MwoI GCNNNNNNNGC 3 cut(s) 593, 1271, 1276
NarI GGCGCC 1 cut(s) 201
NciI CCSGG 2 cut(s) 600, 736
NcoI CCATGG 1 cut(s) 336
NdeII GATC 3 cut(s) 24, 132, 1058
NlaIII CATG 5 cut(s) 73, 307, 340, 448, 463
NlaIV GGNNCC 5 cut(s) 202, 346, 607, 754, 1335
NmuCI GTSAC 2 cut(s) 244, 1064
NsiI ATGCAT 1 cut(s) 712
NspI RCATGY 3 cut(s) 73, 307, 463
PaeI GCATGC 1 cut(s) 463
PciSI GCTCTTC 1 cut(s) 419
PcsI WCGNNNNNNNCGW 3 cut(s) 116, 125, 1074
PctI GAATGC 1 cut(s) 706
PfeI GAWTC 1 cut(s) 746
PfoI TCCNGGA 1 cut(s) 15
PkrI GCNGC 8 cut(s) 145, 411, 454, 514, 605, 1096, 1171, 1354
Ple19I CGATCG 1 cut(s) 27
PleI GAGTC 6 cut(s) 13, 28, 170, 383, 798, 1312
PluTI GGCGCC 1 cut(s) 204
PpsI GAGTC 6 cut(s) 13, 28, 170, 383, 798, 1312
PshBI ATTAAT 1 cut(s) 1328
Psp124BI GAGCTC 2 cut(s) 654, 765
Psp6I CCWGG 5 cut(s) 15, 150, 159, 765, 793
PspGI CCWGG 5 cut(s) 15, 150, 159, 765, 793
PspN4I GGNNCC 5 cut(s) 202, 346, 607, 754, 1335
PspPI GGNCC 4 cut(s) 138, 540, 605, 721
PvuI CGATCG 1 cut(s) 27
RsaI GTAC 1 cut(s) 158
RsaNI GTAC 1 cut(s) 157
Rsr2I CGGWCCG 1 cut(s) 138
RsrII CGGWCCG 1 cut(s) 138
SacI GAGCTC 2 cut(s) 654, 765
SapI GCTCTTC 1 cut(s) 419
SaqAI TTAA 3 cut(s) 612, 1119, 1328
SatI GCNGC 8 cut(s) 144, 410, 453, 513, 604, 1095, 1170, 1353
Sau3AI GATC 3 cut(s) 24, 132, 1058
Sau96I GGNCC 4 cut(s) 138, 540, 605, 721
SchI GAGTC 6 cut(s) 14, 29, 170, 383, 799, 1312
ScrFI CCNGG 7 cut(s) 17, 152, 161, 600, 736, 767, 795
SduI GDGCHC 6 cut(s) 170, 654, 690, 765, 916, 1235
SexAI ACCWGGT 1 cut(s) 150
SfaNI GCATC 4 cut(s) 21, 719, 1013, 1081
SfcI CTRYAG 1 cut(s) 1147
SfoI GGCGCC 1 cut(s) 202
SgrAI CRCCGGYG 1 cut(s) 55
SinI GGWCC 2 cut(s) 138, 540
SphI GCATGC 1 cut(s) 463
Sse9I AATT 5 cut(s) 286, 418, 527, 1011, 1360
SsiI CCGC 8 cut(s) 141, 144, 315, 453, 603, 640, 657, 1019
SspDI GGCGCC 1 cut(s) 200
SspMI CTAG 3 cut(s) 816, 984, 1157
SstI GAGCTC 2 cut(s) 654, 765
StyD4I CCNGG 7 cut(s) 15, 150, 159, 598, 734, 765, 793
StyI CCWWGG 3 cut(s) 336, 717, 855
TaaI ACNGT 7 cut(s) 685, 812, 830, 848, 961, 1151, 1192
TaqI TCGA 9 cut(s) 8, 23, 110, 131, 179, 195, 387, 776, 1261
TaqII GACCGA 1 cut(s) 1115
TasI AATT 5 cut(s) 286, 418, 527, 1011, 1360
TauI GCSGC 3 cut(s) 146, 455, 606
TfiI GAWTC 1 cut(s) 746
Tru1I TTAA 3 cut(s) 612, 1119, 1328
Tru9I TTAA 3 cut(s) 612, 1119, 1328
TscAI CASTG 5 cut(s) 835, 921, 943, 1003, 1156
TseFI GTSAC 2 cut(s) 244, 1064
TseI GCWGC 5 cut(s) 409, 512, 1094, 1169, 1352
Tsp45I GTSAC 2 cut(s) 244, 1064
TspDTI ATGAA 1 cut(s) 1129
TspGWI ACGGA 3 cut(s) 745, 891, 960
TspRI CASTG 5 cut(s) 835, 921, 943, 1003, 1156
VneI GTGCAC 1 cut(s) 1231
VpaK11BI GGWCC 2 cut(s) 138, 540
VspI ATTAAT 1 cut(s) 1328
XapI RAATTY 1 cut(s) 1360
XceI RCATGY 3 cut(s) 73, 307, 463
XmiI GTMKAC 1 cut(s) 93
XspI CTAG 3 cut(s) 816, 984, 1157
Zsp2I ATGCAT 1 cut(s) 712
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.