RchiOBHm_Chr7g0211251
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000076
Physical Location & Seq
Forward (+)
28488421 .. 28489707
1287 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18898

Sequence Viewer

Length: 1287 bp
ATGGAGGAGAGCAGAGGCAATCAACTTCCTGGCCAGAGGTTCTGCCCCATGGACGATGAACTAGTTCTCTTTTACCTCAAGCCGATGTTGAGCGGACAGAACGTGCCCGGCAGAAGCCGCGTGGTGTTCGACTGCGACCTCTACGGTCAGCAAGAACCTTGGGAGATATGGGAGGCCTTCAAGACCAGAAGACCACACGACTTGAGGCTCAATAAGGACATTTACTTCTTCACCCAACACAAGAAGATGAGTTCCACAGACAAGCGCGTACGCCGGAATGTTGGAAGTGGCACCTGGAAGGGCGACGACTCCGGCAAGCCAGTACGATCTGTTGATTCTGGTTGTGTTGTTGGCTTGAAGAAAAGATATACTTACAAGAATGAAGACTCGGTGCACAACGGCTGTTGGATCTTGTACGAGTTCTACCTTGATCGATCACTCAGAGACAAGAAACAAAAGGTGAAAGACTGTGTTCTTTGTCTACTACGAAAGAATGGTGAACCCAAAACCAAGATTGAAAAGAAGAGAAAGCAACGTGAAGAGGAACAGTTTCTTGAAAACAATTATGCCTGTGATGACGGAGAAAACTCGAATAGGGAGCAAGAAGTGTTGCTTGAGCCACAAGCGAAGCGACAACGAACCGTGCCATCCATTGATAATGCACCACCAACAATGCCATCAGAAGATGATGCTGCATTTGCAGCTGAACTAGAAGAGTCATTGGAATGCTCTGAAGATGATAATGCACCCTCATCAGAAGCTGAAGCAGTTGGCCTTCAAGGTGAGGAGAATGGTGGACTCCAAAAATTAGCATCCGAGGGGCAATCATCAGGGCCTTCATTTGTAGACGATTATGGAATATTTAATCAGCTGCCGGAGGAAGATTTTCTCTGGGAGGAAATGGTAGAAGAAATGGGTACGGTAGAGAAGGAAGAACCAGTTCTTAATGGTGTAAGTAGTAATATAGATGTGGATGAAGATAACGCGGTAAACAGCACCCTTCTTTATGCTCCCACATCATCCATGTCTGTGGCCTCTGATGGTTGCACTGAAATGCCATATTTGTCAGAAAATTGTTGCATTGATCCATCTGGAAGCAATAATGTTTGTGGTGGATCGATTGGCTTGCAGGATGCTGCGTACTGGCTTGAGTCTTTGGTAGAGGTCCCAATTGATGAGCAACAGAAGACAGCTGATGAAGACTGTTCAGATTGGTTGGAGTCAATGATCAATTTTAGTCCTGAGGAGAACAACTTCCTTTGGAGTGAAATGCAATGGTGTTCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

428

Amino Acids

48.49

Weight (kDa)

4.43

Isoelectric Point (pI)

68.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 10 - 142 5.3e-23 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 290
AccBSI CCGCTC 1 cut(s) 93
AccI GTMKAC 2 cut(s) 481, 846
AccII CGCG 3 cut(s) 120, 267, 986
AciI CCGC 3 cut(s) 93, 118, 986
AclWI GGATC 3 cut(s) 416, 1079, 1123
AcoI YGGCCR 1 cut(s) 31
AcuI CTGAAG 2 cut(s) 753, 783
AfaI GTAC 5 cut(s) 270, 324, 416, 919, 1142
AgsI TTSAA 5 cut(s) 181, 358, 518, 557, 779
AhlI ACTAGT 1 cut(s) 61
AjnI CCWGG 2 cut(s) 28, 293
AluBI AGCT 4 cut(s) 704, 761, 871, 1193
AluI AGCT 4 cut(s) 704, 761, 871, 1193
Alw21I GWGCWC 1 cut(s) 396
Alw26I GTCTC 1 cut(s) 438
Alw44I GTGCAC 1 cut(s) 392
AlwI GGATC 3 cut(s) 416, 1079, 1123
AlwNI CAGNNNCTG 1 cut(s) 761
AoxI GGCC 5 cut(s) 31, 174, 772, 833, 1032
ApaLI GTGCAC 1 cut(s) 392
ApeKI GCWGC 4 cut(s) 692, 701, 871, 1136
Asp700I GAANNNNTTC 5 cut(s) 63, 549, 885, 939, 1253
AspLEI GCGC 1 cut(s) 267
AspS9I GGNCC 2 cut(s) 833, 1165
AsuC2I CCSGG 1 cut(s) 108
AsuHPI GGTGA 4 cut(s) 223, 472, 509, 794
AvaII GGWCC 1 cut(s) 1165
AxyI CCTNAGG 1 cut(s) 1242
BaeGI GKGCMC 2 cut(s) 108, 396
BalI TGGCCA 1 cut(s) 33
BanI GGYRCC 1 cut(s) 290
BbsI GAAGAC 4 cut(s) 196, 390, 1193, 1206
Bbv12I GWGCWC 1 cut(s) 396
BbvI GCAGC 4 cut(s) 679, 713, 858, 1123
BccI CCATC 4 cut(s) 655, 685, 1034, 1096
BceAI ACGGC 1 cut(s) 415
BcgI CGANNNNNNTGC 2 cut(s) 1108, 1142
BciT130I CCWGG 2 cut(s) 30, 295
BclI TGATCA 1 cut(s) 1227
BcnI CCSGG 1 cut(s) 108
BcoDI GTCTC 1 cut(s) 438
BcuI ACTAGT 1 cut(s) 61
BfaI CTAG 2 cut(s) 62, 710
BisI GCNGC 5 cut(s) 118, 693, 702, 872, 1137
BlsI GCNGC 5 cut(s) 119, 694, 703, 873, 1138
Bme1390I CCNGG 3 cut(s) 30, 108, 295
Bme18I GGWCC 1 cut(s) 1165
BmgT120I GGNCC 2 cut(s) 833, 1165
BmiI GGNNCC 2 cut(s) 292, 1167
BmrFI CCNGG 3 cut(s) 30, 108, 295
BmsI GCATC 3 cut(s) 679, 821, 1123
BpiI GAAGAC 4 cut(s) 196, 390, 1193, 1206
BpuEI CTTGAG 4 cut(s) 62, 223, 635, 1169
BpuMI CCSGG 1 cut(s) 108
Bsa29I ATCGAT 2 cut(s) 433, 1118
BsaJI CCNNGG 3 cut(s) 48, 158, 816
Bse1I ACTGG 3 cut(s) 320, 938, 1148
Bse21I CCTNAGG 1 cut(s) 1242
Bse3DI GCAATG 1 cut(s) 1280
BseBI CCWGG 2 cut(s) 30, 295
BseCI ATCGAT 2 cut(s) 433, 1118
BseDI CCNNGG 3 cut(s) 48, 158, 816
BseGI GGATG 5 cut(s) 647, 812, 979, 1019, 1138
BseMI GCAATG 1 cut(s) 1280
BseMII CTCAG 2 cut(s) 454, 1233
BseNI ACTGG 3 cut(s) 320, 938, 1148
BseRI GAGGAG 3 cut(s) 20, 800, 1259
BseSI GKGCMC 2 cut(s) 108, 396
BseXI GCAGC 4 cut(s) 679, 713, 858, 1123
Bsh1236I CGCG 3 cut(s) 120, 267, 986
BshFI GGCC 5 cut(s) 33, 176, 774, 835, 1034
BshNI GGYRCC 1 cut(s) 290
BshVI ATCGAT 2 cut(s) 433, 1118
BsiHKAI GWGCWC 1 cut(s) 396
BsiSI CCGG 4 cut(s) 108, 274, 312, 875
BsiWI CGTACG 1 cut(s) 268
BslFI GGGAC 1 cut(s) 1151
BsmAI GTCTC 1 cut(s) 438
BsmFI GGGAC 1 cut(s) 1151
BsmI GAATGC 1 cut(s) 731
BsnI GGCC 5 cut(s) 33, 176, 774, 835, 1034
Bsp1286I GDGCHC 2 cut(s) 108, 396
Bsp143I GATC 7 cut(s) 326, 408, 430, 434, 1084, 1115, 1227
Bsp19I CCATGG 1 cut(s) 48
BspACI CCGC 3 cut(s) 93, 118, 986
BspANI GGCC 5 cut(s) 33, 176, 774, 835, 1034
BspCNI CTCAG 2 cut(s) 453, 1234
BspDI ATCGAT 2 cut(s) 433, 1118
BspFNI CGCG 3 cut(s) 120, 267, 986
BspLI GGNNCC 2 cut(s) 292, 1167
BspPI GGATC 3 cut(s) 416, 1079, 1123
BspT107I GGYRCC 1 cut(s) 290
BsrBI CCGCTC 1 cut(s) 93
BsrDI GCAATG 1 cut(s) 1280
BsrI ACTGG 3 cut(s) 320, 938, 1148
BssECI CCNNGG 3 cut(s) 48, 158, 816
BssMI GATC 7 cut(s) 326, 408, 430, 434, 1084, 1115, 1227
BssT1I CCWWGG 2 cut(s) 48, 158
Bst2UI CCWGG 2 cut(s) 30, 295
Bst4CI ACNGT 6 cut(s) 146, 470, 549, 643, 922, 1205
Bst6I CTCTTC 3 cut(s) 518, 534, 708
BstC8I GCNNGC 2 cut(s) 317, 1127
BstDEI CTNAG 2 cut(s) 440, 1242
BstDSI CCRYGG 1 cut(s) 48
BstF5I GGATG 5 cut(s) 647, 812, 979, 1019, 1138
BstFNI CGCG 3 cut(s) 120, 267, 986
BstHHI GCGC 1 cut(s) 267
BstKTI GATC 7 cut(s) 329, 411, 433, 437, 1087, 1118, 1230
BstMAI GTCTC 1 cut(s) 438
BstMBI GATC 7 cut(s) 326, 408, 430, 434, 1084, 1115, 1227
BstMWI GCNNNNNNNGC 3 cut(s) 117, 698, 701
BstNI CCWGG 2 cut(s) 30, 295
BstSCI CCNGG 3 cut(s) 28, 106, 293
BstSLI GKGCMC 2 cut(s) 108, 396
BstUI CGCG 3 cut(s) 120, 267, 986
BstV1I GCAGC 4 cut(s) 679, 713, 858, 1123
BstV2I GAAGAC 4 cut(s) 196, 390, 1193, 1206
BstX2I RGATCY 1 cut(s) 408
BstXI CCANNNNNNTGG 1 cut(s) 1030
BstYI RGATCY 1 cut(s) 408
Bsu15I ATCGAT 2 cut(s) 433, 1118
Bsu36I CCTNAGG 1 cut(s) 1242
BsuRI GGCC 5 cut(s) 33, 176, 774, 835, 1034
BsuTUI ATCGAT 2 cut(s) 433, 1118
BtgI CCRYGG 1 cut(s) 48
BtsCI GGATG 5 cut(s) 647, 812, 979, 1019, 1138
BtsIMutI CAGTG 1 cut(s) 1047
Cac8I GCNNGC 2 cut(s) 317, 1127
CaiI CAGNNNCTG 1 cut(s) 761
CfoI GCGC 1 cut(s) 267
Cfr13I GGNCC 2 cut(s) 833, 1165
ClaI ATCGAT 2 cut(s) 433, 1118
Csp6I GTAC 5 cut(s) 269, 323, 415, 918, 1141
CspCI CAANNNNNGTGG 2 cut(s) 183, 218
CviAII CATG 2 cut(s) 49, 1024
CviQI GTAC 5 cut(s) 269, 323, 415, 918, 1141
DdeI CTNAG 2 cut(s) 440, 1242
DpnI GATC 7 cut(s) 328, 410, 432, 436, 1086, 1117, 1229
DpnII GATC 7 cut(s) 326, 408, 430, 434, 1084, 1115, 1227
EaeI YGGCCR 1 cut(s) 31
Eam1104I CTCTTC 3 cut(s) 518, 534, 708
EarI CTCTTC 3 cut(s) 518, 534, 708
Eco130I CCWWGG 2 cut(s) 48, 158
Eco147I AGGCCT 1 cut(s) 176
Eco47I GGWCC 1 cut(s) 1165
Eco57I CTGAAG 2 cut(s) 753, 783
Eco81I CCTNAGG 1 cut(s) 1242
EcoO109I RGGNCCY 2 cut(s) 833, 1165
EcoRII CCWGG 2 cut(s) 28, 293
EcoT14I CCWWGG 2 cut(s) 48, 158
ErhI CCWWGG 2 cut(s) 48, 158
FaeI CATG 2 cut(s) 52, 1027
FaiI YATR 9 cut(s) 50, 169, 369, 567, 855, 965, 1008, 1025, 1060
FalI AAGNNNNNCTT 4 cut(s) 355, 387, 597, 629
FaqI GGGAC 1 cut(s) 1151
FatI CATG 2 cut(s) 48, 1023
FbaI TGATCA 1 cut(s) 1227
FblI GTMKAC 2 cut(s) 481, 846
Fnu4HI GCNGC 5 cut(s) 118, 693, 702, 872, 1137
FokI GGATG 5 cut(s) 634, 799, 986, 1006, 1145
Fsp4HI GCNGC 5 cut(s) 118, 693, 702, 872, 1137
FspBI CTAG 2 cut(s) 62, 710
GlaI GCGC 1 cut(s) 266
GluI GCNGC 5 cut(s) 118, 693, 702, 872, 1137
HaeIII GGCC 5 cut(s) 33, 176, 774, 835, 1034
HapII CCGG 4 cut(s) 108, 274, 312, 875
HhaI GCGC 1 cut(s) 267
Hin1II CATG 2 cut(s) 52, 1027
Hin6I GCGC 1 cut(s) 265
HinP1I GCGC 1 cut(s) 265
HinfI GANTC 7 cut(s) 308, 335, 386, 716, 798, 1151, 1220
HpaII CCGG 4 cut(s) 108, 274, 312, 875
HphI GGTGA 4 cut(s) 223, 472, 509, 794
Hpy166II GTNNAC 6 cut(s) 394, 482, 500, 797, 847, 991
Hpy188I TCNGA 8 cut(s) 443, 682, 733, 757, 817, 1039, 1069, 1210
Hpy188III TCNNGA 4 cut(s) 181, 554, 1092, 1241
Hpy8I GTNNAC 6 cut(s) 394, 482, 500, 797, 847, 991
Hpy99I CGWCG 1 cut(s) 308
HpyAV CCTTC 6 cut(s) 187, 292, 785, 846, 922, 1010
HpyCH4III ACNGT 6 cut(s) 146, 470, 549, 643, 922, 1205
HpyCH4IV ACGT 2 cut(s) 102, 535
HpyCH4V TGCA 9 cut(s) 394, 662, 695, 701, 746, 1047, 1080, 1129, 1273
HpyF10VI GCNNNNNNNGC 3 cut(s) 117, 698, 701
HpyF3I CTNAG 2 cut(s) 440, 1242
HpySE526I ACGT 2 cut(s) 102, 535
Hsp92II CATG 2 cut(s) 52, 1027
HspAI GCGC 1 cut(s) 265
Ksp22I TGATCA 1 cut(s) 1227
Kzo9I GATC 7 cut(s) 326, 408, 430, 434, 1084, 1115, 1227
LmnI GCTCC 2 cut(s) 598, 1015
Lsp1109I GCAGC 4 cut(s) 679, 713, 858, 1123
LweI GCATC 3 cut(s) 679, 821, 1123
MaeI CTAG 2 cut(s) 62, 710
MaeII ACGT 2 cut(s) 102, 535
MalI GATC 7 cut(s) 328, 410, 432, 436, 1086, 1117, 1229
MbiI CCGCTC 1 cut(s) 93
MboI GATC 7 cut(s) 326, 408, 430, 434, 1084, 1115, 1227
MfeI CAATTG 1 cut(s) 1170
MflI RGATCY 1 cut(s) 408
MhlI GDGCHC 2 cut(s) 108, 396
MlsI TGGCCA 1 cut(s) 33
MluCI AATT 5 cut(s) 562, 806, 1072, 1170, 1231
MluNI TGGCCA 1 cut(s) 33
MlyI GAGTC 6 cut(s) 302, 380, 725, 792, 1160, 1229
MmeI TCCRAC 3 cut(s) 262, 386, 1197
Mox20I TGGCCA 1 cut(s) 33
MroXI GAANNNNTTC 5 cut(s) 63, 549, 885, 939, 1253
MscI TGGCCA 1 cut(s) 33
MseI TTAA 2 cut(s) 864, 945
MslI CAYNNNNRTG 3 cut(s) 724, 1028, 1052
Msp20I TGGCCA 1 cut(s) 33
MspA1I CMGCKG 3 cut(s) 704, 871, 1193
MspI CCGG 4 cut(s) 108, 274, 312, 875
MspR9I CCNGG 3 cut(s) 30, 108, 295
MunI CAATTG 1 cut(s) 1170
Mva1269I GAATGC 1 cut(s) 731
MvaI CCWGG 2 cut(s) 30, 295
MvnI CGCG 3 cut(s) 120, 267, 986
MwoI GCNNNNNNNGC 3 cut(s) 117, 698, 701
NciI CCSGG 1 cut(s) 108
NcoI CCATGG 1 cut(s) 48
NdeII GATC 7 cut(s) 326, 408, 430, 434, 1084, 1115, 1227
NlaIII CATG 2 cut(s) 52, 1027
NlaIV GGNNCC 2 cut(s) 292, 1167
PceI AGGCCT 1 cut(s) 176
PctI GAATGC 1 cut(s) 731
PdmI GAANNNNTTC 5 cut(s) 63, 549, 885, 939, 1253
PfeI GAWTC 1 cut(s) 335
Pfl23II CGTACG 1 cut(s) 268
PkrI GCNGC 5 cut(s) 119, 694, 703, 873, 1138
PleI GAGTC 6 cut(s) 302, 380, 724, 792, 1159, 1228
PpsI GAGTC 6 cut(s) 302, 380, 724, 792, 1159, 1228
PpuMI RGGWCCY 1 cut(s) 1165
Psp5II RGGWCCY 1 cut(s) 1165
Psp6I CCWGG 2 cut(s) 28, 293
PspGI CCWGG 2 cut(s) 28, 293
PspLI CGTACG 1 cut(s) 268
PspN4I GGNNCC 2 cut(s) 292, 1167
PspPI GGNCC 2 cut(s) 833, 1165
PspPPI RGGWCCY 1 cut(s) 1165
PstNI CAGNNNCTG 1 cut(s) 761
PsuI RGATCY 1 cut(s) 408
PvuII CAGCTG 3 cut(s) 704, 871, 1193
RsaI GTAC 5 cut(s) 270, 324, 416, 919, 1142
RsaNI GTAC 5 cut(s) 269, 323, 415, 918, 1141
RseI CAYNNNNRTG 3 cut(s) 724, 1028, 1052
SaqAI TTAA 2 cut(s) 864, 945
SatI GCNGC 5 cut(s) 118, 693, 702, 872, 1137
Sau3AI GATC 7 cut(s) 326, 408, 430, 434, 1084, 1115, 1227
Sau96I GGNCC 2 cut(s) 833, 1165
SchI GAGTC 6 cut(s) 302, 380, 725, 792, 1160, 1229
ScrFI CCNGG 3 cut(s) 30, 108, 295
SduI GDGCHC 2 cut(s) 108, 396
SfaNI GCATC 3 cut(s) 679, 821, 1123
SinI GGWCC 1 cut(s) 1165
SmiMI CAYNNNNRTG 3 cut(s) 724, 1028, 1052
SmlI CTYRAG 4 cut(s) 77, 202, 614, 1148
SmoI CTYRAG 4 cut(s) 77, 202, 614, 1148
SpeI ACTAGT 1 cut(s) 61
Sse9I AATT 5 cut(s) 562, 806, 1072, 1170, 1231
SseBI AGGCCT 1 cut(s) 176
SsiI CCGC 3 cut(s) 93, 118, 986
SspI AATATT 1 cut(s) 861
SspMI CTAG 2 cut(s) 62, 710
StuI AGGCCT 1 cut(s) 176
StyD4I CCNGG 3 cut(s) 28, 106, 293
StyI CCWWGG 2 cut(s) 48, 158
TaaI ACNGT 6 cut(s) 146, 470, 549, 643, 922, 1205
TaiI ACGT 2 cut(s) 105, 538
TaqI TCGA 4 cut(s) 129, 433, 590, 1118
TasI AATT 5 cut(s) 562, 806, 1072, 1170, 1231
TauI GCSGC 1 cut(s) 120
TfiI GAWTC 1 cut(s) 335
Tru1I TTAA 2 cut(s) 864, 945
Tru9I TTAA 2 cut(s) 864, 945
TscAI CASTG 1 cut(s) 1054
TseI GCWGC 4 cut(s) 692, 701, 871, 1136
TspDTI ATGAA 5 cut(s) 72, 396, 828, 990, 1212
TspGWI ACGGA 1 cut(s) 594
TspRI CASTG 1 cut(s) 1054
VneI GTGCAC 1 cut(s) 392
VpaK11BI GGWCC 1 cut(s) 1165
XmiI GTMKAC 2 cut(s) 481, 846
XmnI GAANNNNTTC 5 cut(s) 63, 549, 885, 939, 1253
XspI CTAG 2 cut(s) 62, 710
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.