Rh5CG244900
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000076
Physical Location & Seq
Reverse (-)
25545250 .. 25546473
1224 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG244900.1

Sequence Viewer

Length: 1224 bp
ATGGACGGAGGTTGTCTGCTTCTTCCAGGCCAAAGGTTTTGCCCCATGGAAGATGAACTACTCATGTTCTACCTTAAGCCTAAGGTGAACGGGATGGAAGTGCCCGGCAACGAAGACGTGATCTGCGAGATGGATCTTTACGGTAACCAAGATCCTTGGAAGATATGGGAGAGATTCGAAGAAAGAAGGGCCAACGACTTGAGGAGGAACAAAGATCTCTACTTCTTCACCCAAAAGAAGAAGAAGACTGCAAGAAGCACACGTACAAGCCGAACAGTTGGGAGTGGCGGTACTTGGAAAGGCCAAAACGCAGCCAAGGAGATATATCTTCTTGATCAGAATCAGCAGCCAACATCTACTCTTCTTGGTTTCAAGAAAACCTACACCTACAAGAACAAAGACTCCGTGCATCATGGTTGCTGGATTATGTATGAGTTTGAACTTGATAAGTCACAACTCCTGCACAAGAAACAAGTAAACAAGAATGAATACGTTCTTTGTTTGCTTAGGAAGAATGATGTACTACCGGAAAAGAAGAGAAAAAGGCAAGAGGAGATACTTGAAGATTATGTCGAGGATGACGATGGAGATAATTATATCGATCCTGAATCGGTTATTGAGGAGCCGCAAGAGAAACGACTACGTCTTCTACCATGCACTGATAATGTGCCAGCACCATCGTTGGAAGCTGAACAAGAACAATTCTTGGTAAGCGACCAACAATTCTTGCAGCCAGCAACATCATTAGAAGCTGAACAAGAAGCAGTACCCACACCATTAGAAGAAGAACCACTTTTCTTGCAAGTGGATGAGAATATGGGACTCCAACAATTCGAGGCTGATCAAGGAGCATCGTCCTTGGAGTTGGCTGAATTAGAAAAGTGGTTTGAAGCTGAATTTTATGGTGAATATGTTGCCTCTCCAGTTGAAGAGAATTCAGGACTGCAACAATTGGAAGCTGAACCTCAACTAGGAGAAGAAAATCTGGAGCAACAACTTGATGCACCATCATTTGCAGCTGACGGGATGATGAGTGACCTACAGTCTCACCAGCAAATGGGAGCTGAAGCCAATGTGTATGGAGGGAACTTGAGTGACGCTATGCTCGGTGAAAACTGGCCTATGTGTTTTTTGGATGATCTAATGATTGATGAGCAGCCAAATACCATGGAAGTGGGAGAGTCGAATGCTGCTTATTCAGATTTTGAGAACTTTGCATTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

407

Amino Acids

46.77

Weight (kDa)

4.35

Isoelectric Point (pI)

55.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 9 - 148 6.7e-26 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1057
AciI CCGC 2 cut(s) 288, 626
AclWI GGATC 3 cut(s) 141, 146, 596
AcsI RAATTY 2 cut(s) 896, 934
AcuI CTGAAG 1 cut(s) 1086
AfaI GTAC 4 cut(s) 265, 292, 522, 768
AfiI CCNNNNNNNGG 2 cut(s) 971, 1057
AflII CTTAAG 1 cut(s) 74
AflIII ACRYGT 1 cut(s) 260
AgsI TTSAA 5 cut(s) 373, 440, 563, 890, 929
AhdI GACNNNNNGTC 1 cut(s) 1042
AjiI CACGTC 1 cut(s) 118
AjnI CCWGG 1 cut(s) 25
AloI GAACNNNNNNTCC 2 cut(s) 386, 418
AluBI AGCT 6 cut(s) 689, 752, 893, 959, 1019, 1064
AluI AGCT 6 cut(s) 689, 752, 893, 959, 1019, 1064
Alw26I GTCTC 1 cut(s) 1050
AlwI GGATC 3 cut(s) 141, 146, 596
AoxI GGCC 4 cut(s) 28, 189, 301, 1118
ApeKI GCWGC 6 cut(s) 311, 346, 730, 1016, 1156, 1190
ApoI RAATTY 2 cut(s) 896, 934
Asp700I GAANNNNTTC 1 cut(s) 492
AspS9I GGNCC 1 cut(s) 189
AsuC2I CCSGG 1 cut(s) 105
AsuHPI GGTGA 5 cut(s) 97, 220, 917, 1040, 1121
AsuII TTCGAA 1 cut(s) 177
AxyI CCTNAGG 1 cut(s) 81
BaeGI GKGCMC 1 cut(s) 105
BarI GAAGNNNNNNTAC 4 cut(s) 42, 74, 247, 279
BbsI GAAGAC 3 cut(s) 120, 251, 638
BbvI GCAGC 6 cut(s) 323, 358, 742, 1028, 1168, 1177
BccI CCATC 5 cut(s) 88, 124, 578, 685, 1015
BciT130I CCWGG 1 cut(s) 27
BclI TGATCA 2 cut(s) 334, 841
BcnI CCSGG 1 cut(s) 105
BcoDI GTCTC 1 cut(s) 1050
BfaI CTAG 1 cut(s) 971
BfmI CTRYAG 1 cut(s) 1040
BfrI CTTAAG 1 cut(s) 74
BglII AGATCT 1 cut(s) 214
BisI GCNGC 7 cut(s) 312, 347, 626, 731, 1017, 1157, 1191
BlsI GCNGC 7 cut(s) 313, 348, 627, 732, 1018, 1158, 1192
Bme1390I CCNGG 2 cut(s) 27, 105
BmeRI GACNNNNNGTC 1 cut(s) 1042
BmgBI CACGTC 1 cut(s) 118
BmgT120I GGNCC 1 cut(s) 189
BmiI GGNNCC 1 cut(s) 624
BmrFI CCNGG 2 cut(s) 27, 105
BmsI GCATC 3 cut(s) 418, 860, 991
BpiI GAAGAC 3 cut(s) 120, 251, 638
BpmI CTGGAG 2 cut(s) 906, 1007
Bpu10I CCTNAGC 1 cut(s) 506
Bpu14I TTCGAA 1 cut(s) 177
BpuEI CTTGAG 2 cut(s) 220, 1111
BpuMI CCSGG 1 cut(s) 105
Bsa29I ATCGAT 1 cut(s) 600
BsaAI YACGTR 1 cut(s) 263
BsaBI GATNNNNATC 1 cut(s) 339
BsaJI CCNNGG 5 cut(s) 45, 155, 315, 858, 1167
BsaWI WCCGGW 1 cut(s) 526
BsaXI ACNNNNNCTCC 4 cut(s) 274, 304, 386, 416
Bsc4I CCNNNNNNNGG 2 cut(s) 971, 1057
Bse1I ACTGG 2 cut(s) 923, 1121
Bse21I CCTNAGG 1 cut(s) 81
Bse8I GATNNNNATC 1 cut(s) 339
BseBI CCWGG 1 cut(s) 27
BseCI ATCGAT 1 cut(s) 600
BseDI CCNNGG 5 cut(s) 45, 155, 315, 858, 1167
BseGI GGATG 5 cut(s) 99, 583, 814, 1032, 1141
BseJI GATNNNNATC 1 cut(s) 339
BseLI CCNNNNNNNGG 2 cut(s) 971, 1057
BseNI ACTGG 2 cut(s) 923, 1121
BseRI GAGGAG 3 cut(s) 217, 566, 635
BseSI GKGCMC 1 cut(s) 105
BseXI GCAGC 6 cut(s) 323, 358, 742, 1028, 1168, 1177
BsgI GTGCAG 1 cut(s) 446
BshFI GGCC 4 cut(s) 30, 191, 303, 1120
BshVI ATCGAT 1 cut(s) 600
BsiSI CCGG 2 cut(s) 105, 527
BslFI GGGAC 1 cut(s) 834
BslI CCNNNNNNNGG 2 cut(s) 971, 1057
BsmAI GTCTC 1 cut(s) 1050
BsmFI GGGAC 1 cut(s) 834
BsmI GAATGC 1 cut(s) 1192
BsnI GGCC 4 cut(s) 30, 191, 303, 1120
Bsp119I TTCGAA 1 cut(s) 177
Bsp1286I GDGCHC 1 cut(s) 105
Bsp143I GATC 8 cut(s) 120, 133, 151, 214, 334, 601, 841, 1138
Bsp19I CCATGG 2 cut(s) 45, 1167
BspACI CCGC 2 cut(s) 288, 626
BspANI GGCC 4 cut(s) 30, 191, 303, 1120
BspDI ATCGAT 1 cut(s) 600
BspLI GGNNCC 1 cut(s) 624
BspPI GGATC 3 cut(s) 141, 146, 596
BspT104I TTCGAA 1 cut(s) 177
BspTI CTTAAG 1 cut(s) 74
BsrI ACTGG 2 cut(s) 923, 1121
BssECI CCNNGG 5 cut(s) 45, 155, 315, 858, 1167
BssMI GATC 8 cut(s) 120, 133, 151, 214, 334, 601, 841, 1138
BssT1I CCWWGG 5 cut(s) 45, 155, 315, 858, 1167
Bst2UI CCWGG 1 cut(s) 27
Bst4CI ACNGT 3 cut(s) 143, 277, 1044
Bst6I CTCTTC 3 cut(s) 366, 530, 924
BstAFI CTTAAG 1 cut(s) 74
BstBAI YACGTR 1 cut(s) 263
BstBI TTCGAA 1 cut(s) 177
BstC8I GCNNGC 2 cut(s) 672, 735
BstDEI CTNAG 2 cut(s) 81, 506
BstDSI CCRYGG 2 cut(s) 45, 1167
BstEII GGTNACC 1 cut(s) 143
BstENI CCTNNNNNAGG 1 cut(s) 969
BstF5I GGATG 5 cut(s) 99, 583, 814, 1032, 1141
BstKTI GATC 8 cut(s) 123, 136, 154, 217, 337, 604, 844, 1141
BstMAI GTCTC 1 cut(s) 1050
BstMBI GATC 8 cut(s) 120, 133, 151, 214, 334, 601, 841, 1138
BstNI CCWGG 1 cut(s) 27
BstPI GGTNACC 1 cut(s) 143
BstSCI CCNGG 2 cut(s) 25, 103
BstSFI CTRYAG 1 cut(s) 1040
BstSLI GKGCMC 1 cut(s) 105
BstV1I GCAGC 6 cut(s) 323, 358, 742, 1028, 1168, 1177
BstV2I GAAGAC 3 cut(s) 120, 251, 638
BstX2I RGATCY 3 cut(s) 133, 151, 214
BstXI CCANNNNNNTGG 1 cut(s) 1174
BstYI RGATCY 3 cut(s) 133, 151, 214
Bsu15I ATCGAT 1 cut(s) 600
Bsu36I CCTNAGG 1 cut(s) 81
BsuRI GGCC 4 cut(s) 30, 191, 303, 1120
BsuTUI ATCGAT 1 cut(s) 600
BtgI CCRYGG 2 cut(s) 45, 1167
BtrI CACGTC 1 cut(s) 118
BtsCI GGATG 5 cut(s) 99, 583, 814, 1032, 1141
BtsIMutI CAGTG 1 cut(s) 657
Cac8I GCNNGC 2 cut(s) 672, 735
Cfr13I GGNCC 1 cut(s) 189
ClaI ATCGAT 1 cut(s) 600
CseI GACGC 1 cut(s) 1106
Csp6I GTAC 4 cut(s) 264, 291, 521, 767
CspCI CAANNNNNGTGG 2 cut(s) 780, 815
CviAII CATG 5 cut(s) 46, 64, 413, 654, 1168
CviQI GTAC 4 cut(s) 264, 291, 521, 767
DdeI CTNAG 2 cut(s) 81, 506
DpnI GATC 8 cut(s) 122, 135, 153, 216, 336, 603, 843, 1140
DpnII GATC 8 cut(s) 120, 133, 151, 214, 334, 601, 841, 1138
DriI GACNNNNNGTC 1 cut(s) 1042
Eam1104I CTCTTC 3 cut(s) 366, 530, 924
Eam1105I GACNNNNNGTC 1 cut(s) 1042
EarI CTCTTC 3 cut(s) 366, 530, 924
Eco130I CCWWGG 5 cut(s) 45, 155, 315, 858, 1167
Eco57I CTGAAG 1 cut(s) 1086
Eco81I CCTNAGG 1 cut(s) 81
Eco91I GGTNACC 1 cut(s) 143
EcoNI CCTNNNNNAGG 1 cut(s) 969
EcoO65I GGTNACC 1 cut(s) 143
EcoRI GAATTC 1 cut(s) 934
EcoRII CCWGG 1 cut(s) 25
EcoT14I CCWWGG 5 cut(s) 45, 155, 315, 858, 1167
ErhI CCWWGG 5 cut(s) 45, 155, 315, 858, 1167
FaeI CATG 5 cut(s) 49, 67, 416, 657, 1171
FalI AAGNNNNNCTT 2 cut(s) 777, 809
FaqI GGGAC 1 cut(s) 834
FatI CATG 5 cut(s) 45, 63, 412, 653, 1167
FbaI TGATCA 2 cut(s) 334, 841
Fnu4HI GCNGC 7 cut(s) 312, 347, 626, 731, 1017, 1157, 1191
FokI GGATG 5 cut(s) 106, 590, 821, 1039, 1148
Fsp4HI GCNGC 7 cut(s) 312, 347, 626, 731, 1017, 1157, 1191
FspBI CTAG 1 cut(s) 971
GluI GCNGC 7 cut(s) 312, 347, 626, 731, 1017, 1157, 1191
GsuI CTGGAG 2 cut(s) 906, 1007
HaeIII GGCC 4 cut(s) 30, 191, 303, 1120
HapII CCGG 2 cut(s) 105, 527
HgaI GACGC 1 cut(s) 1106
Hin1II CATG 5 cut(s) 49, 67, 416, 657, 1171
HinfI GANTC 6 cut(s) 174, 340, 401, 608, 822, 1181
HpaII CCGG 2 cut(s) 105, 527
HphI GGTGA 5 cut(s) 97, 220, 917, 1040, 1121
Hpy166II GTNNAC 2 cut(s) 88, 478
Hpy188I TCNGA 2 cut(s) 339, 1201
Hpy188III TCNNGA 5 cut(s) 332, 373, 605, 939, 986
Hpy8I GTNNAC 2 cut(s) 88, 478
HpyAV CCTTC 1 cut(s) 180
HpyCH4III ACNGT 3 cut(s) 143, 277, 1044
HpyCH4IV ACGT 4 cut(s) 117, 262, 492, 643
HpyF3I CTNAG 2 cut(s) 81, 506
HpySE526I ACGT 4 cut(s) 117, 262, 492, 643
Hsp92II CATG 5 cut(s) 49, 67, 416, 657, 1171
Ksp22I TGATCA 2 cut(s) 334, 841
Kzo9I GATC 8 cut(s) 120, 133, 151, 214, 334, 601, 841, 1138
LmnI GCTCC 4 cut(s) 622, 848, 988, 1061
Lsp1109I GCAGC 6 cut(s) 323, 358, 742, 1028, 1168, 1177
LweI GCATC 3 cut(s) 418, 860, 991
MaeI CTAG 1 cut(s) 971
MaeII ACGT 4 cut(s) 117, 262, 492, 643
MaeIII GTNAC 4 cut(s) 143, 450, 1034, 1094
MalI GATC 8 cut(s) 122, 135, 153, 216, 336, 603, 843, 1140
MboI GATC 8 cut(s) 120, 133, 151, 214, 334, 601, 841, 1138
MfeI CAATTG 1 cut(s) 950
MflI RGATCY 3 cut(s) 133, 151, 214
MhlI GDGCHC 1 cut(s) 105
MluCI AATT 8 cut(s) 592, 701, 722, 830, 872, 896, 934, 950
MlyI GAGTC 3 cut(s) 395, 816, 1190
MmeI TCCRAC 2 cut(s) 663, 850
MnlI CCTC 9 cut(s) 195, 198, 544, 568, 613, 829, 928, 975, 1076
MroXI GAANNNNTTC 1 cut(s) 492
MseI TTAA 1 cut(s) 75
MslI CAYNNNNRTG 1 cut(s) 1172
MspA1I CMGCKG 1 cut(s) 1019
MspCI CTTAAG 1 cut(s) 74
MspI CCGG 2 cut(s) 105, 527
MspR9I CCNGG 2 cut(s) 27, 105
MunI CAATTG 1 cut(s) 950
Mva1269I GAATGC 1 cut(s) 1192
MvaI CCWGG 1 cut(s) 27
NciI CCSGG 1 cut(s) 105
NcoI CCATGG 2 cut(s) 45, 1167
NdeII GATC 8 cut(s) 120, 133, 151, 214, 334, 601, 841, 1138
NlaIII CATG 5 cut(s) 49, 67, 416, 657, 1171
NlaIV GGNNCC 1 cut(s) 624
NmuCI GTSAC 3 cut(s) 450, 1034, 1094
NspV TTCGAA 1 cut(s) 177
PcsI WCGNNNNNNNCGW 3 cut(s) 123, 268, 579
PctI GAATGC 1 cut(s) 1192
PdmI GAANNNNTTC 1 cut(s) 492
PfeI GAWTC 3 cut(s) 174, 340, 608
PflFI GACNNNGTC 1 cut(s) 642
PflMI CCANNNNNTGG 1 cut(s) 1057
PkrI GCNGC 7 cut(s) 313, 348, 627, 732, 1018, 1158, 1192
PleI GAGTC 3 cut(s) 395, 816, 1189
PpsI GAGTC 3 cut(s) 395, 816, 1189
Ppu21I YACGTR 1 cut(s) 263
Psp6I CCWGG 1 cut(s) 25
PspEI GGTNACC 1 cut(s) 143
PspGI CCWGG 1 cut(s) 25
PspN4I GGNNCC 1 cut(s) 624
PspPI GGNCC 1 cut(s) 189
PsuI RGATCY 3 cut(s) 133, 151, 214
PsyI GACNNNGTC 1 cut(s) 642
PvuII CAGCTG 1 cut(s) 1019
RsaI GTAC 4 cut(s) 265, 292, 522, 768
RsaNI GTAC 4 cut(s) 264, 291, 521, 767
RseI CAYNNNNRTG 1 cut(s) 1172
SaqAI TTAA 1 cut(s) 75
SatI GCNGC 7 cut(s) 312, 347, 626, 731, 1017, 1157, 1191
Sau3AI GATC 8 cut(s) 120, 133, 151, 214, 334, 601, 841, 1138
Sau96I GGNCC 1 cut(s) 189
SchI GAGTC 3 cut(s) 395, 816, 1190
ScrFI CCNGG 2 cut(s) 27, 105
SduI GDGCHC 1 cut(s) 105
SfaNI GCATC 3 cut(s) 418, 860, 991
SfcI CTRYAG 1 cut(s) 1040
SfuI TTCGAA 1 cut(s) 177
SmiMI CAYNNNNRTG 1 cut(s) 1172
SmlI CTYRAG 3 cut(s) 74, 199, 1090
SmoI CTYRAG 3 cut(s) 74, 199, 1090
Sse9I AATT 8 cut(s) 592, 701, 722, 830, 872, 896, 934, 950
SsiI CCGC 2 cut(s) 288, 626
SspMI CTAG 1 cut(s) 971
StyD4I CCNGG 2 cut(s) 25, 103
StyI CCWWGG 5 cut(s) 45, 155, 315, 858, 1167
TaaI ACNGT 3 cut(s) 143, 277, 1044
TaiI ACGT 4 cut(s) 120, 265, 495, 646
TaqI TCGA 5 cut(s) 177, 573, 600, 834, 1184
TasI AATT 8 cut(s) 592, 701, 722, 830, 872, 896, 934, 950
TatI WGTACW 1 cut(s) 520
TauI GCSGC 1 cut(s) 628
TfiI GAWTC 3 cut(s) 174, 340, 608
Tru1I TTAA 1 cut(s) 75
Tru9I TTAA 1 cut(s) 75
TscAI CASTG 1 cut(s) 664
TseFI GTSAC 3 cut(s) 450, 1034, 1094
TseI GCWGC 6 cut(s) 311, 346, 730, 1016, 1156, 1190
Tsp45I GTSAC 3 cut(s) 450, 1034, 1094
TspDTI ATGAA 2 cut(s) 69, 501
TspGWI ACGGA 2 cut(s) 21, 394
TspRI CASTG 1 cut(s) 664
Tth111I GACNNNGTC 1 cut(s) 642
Van91I CCANNNNNTGG 1 cut(s) 1057
Vha464I CTTAAG 1 cut(s) 74
XagI CCTNNNNNAGG 1 cut(s) 969
XapI RAATTY 2 cut(s) 896, 934
XmnI GAANNNNTTC 1 cut(s) 492
XspI CTAG 1 cut(s) 971
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.