Rroxscaffold_3G00244920
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000076
Physical Location & Seq
Reverse (-)
37730761 .. 37731918
1158 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00244920.1

Sequence Viewer

Length: 1104 bp
ATGGAGGATCATATGCTTCTGCCTGGCCATAGGTTTTGTCCCATGGAGGATGAACTACTCTTGTACTACCTTAAGCCCAAGGTGAACGGGAAGGAGGTACCTGGAAAAGAATCCCTTATTTGCGAGTTGGATCTTTACGGTGACCAAGAACCATGGAAGATATGGGAAAGATTCGAAGCAAGACGGACAAACGACTTGAGGAAGAACAAAGATCTCTACTTCTTCACCCAAAAGAAGAAGGTCAGTGCAAAGGCCTCGCGTATAAGTCGGAAAGTTGGGAGTGGTACTTGGAAAGGCCAAGCCGCAGCCAAGGACATATATCTTCTTGATGAGAAAACAACCACTCTTCTTGGTTTCAAGAAAACATACACCTATCAGAATAAGTGTTCTGTGCATCATGGTCGCTGGATCATGTATGAGTTCGAACTTCATAAGTCGCAACTCCTGCTAAACAAGAATGACTATGTTCTTTGTGTACTTAGGAAAAATGATGAACTGCCGGAAAGGAAGCGAAAAAGGCAACAAGAAGAGGAGATGCTTGAGGAGGACTATGTTGAGGATGGTGATGGAGATAATGATTTGAACTGCGATCCTGCATTGTTGCTTGAGGAGCCGCAAGAGAAGCGGCAATGCCTCCTATCTTGCTCTGATAATAATGAGGCAGCACCATCATTGGAGTGGGCTGAACTAGAACAATGGTTCGACCAACAATTCTTGCAACCAGCACTATCATTAGAAGCTGGACCAACACCACTAGAAGATGAGCCAGCTGTTGCTTTGGATGAAAACTTGGGGCAGCAATGTCATGATATACCAACCATTACAGCTAATGAAATAATGAGTGGCCTTGACTTTCACCATGACGAAAATCTAGAGCAGCATATGGGAGATGAAGTTGGTGTCATGGCACAAGGAGAAGTCGATGTGTATGGTGGGAATTTGAGTGATGTTATCGTTGGCGAAGACTGGGCCAAGTCTTTTATGGAAGACCTAATGAATGATGAGCAGCTGAATACCATGGAAGACTGGGCCAAGTCTTTTATGGAGGACCTAATGAATGATGAGCAGCTAAATACCATGGAAGTGGGCAACTGCATAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

367

Amino Acids

42.52

Weight (kDa)

4.56

Isoelectric Point (pI)

39.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 8 - 143 6e-25 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 97
AccB1I GGYRCC 1 cut(s) 97
AccII CGCG 1 cut(s) 259
AciI CCGC 3 cut(s) 303, 614, 625
AclWI GGATC 4 cut(s) 15, 138, 416, 584
AcoI YGGCCR 1 cut(s) 25
AcsI RAATTY 1 cut(s) 937
AfaI GTAC 4 cut(s) 65, 99, 286, 477
AflII CTTAAG 1 cut(s) 71
AgsI TTSAA 2 cut(s) 358, 583
AjnI CCWGG 2 cut(s) 22, 100
AluBI AGCT 5 cut(s) 740, 770, 827, 1009, 1069
AluI AGCT 5 cut(s) 740, 770, 827, 1009, 1069
AlwI GGATC 4 cut(s) 15, 138, 416, 584
AoxI GGCC 6 cut(s) 25, 252, 295, 844, 969, 1029
ApeKI GCWGC 6 cut(s) 305, 662, 796, 877, 1006, 1066
ApoI RAATTY 1 cut(s) 937
Asp718I GGTACC 1 cut(s) 97
AspS9I GGNCC 4 cut(s) 743, 969, 1029, 1048
AsuHPI GGTGA 5 cut(s) 94, 152, 217, 575, 848
AsuII TTCGAA 2 cut(s) 174, 423
AvaII GGWCC 2 cut(s) 743, 1048
BalI TGGCCA 1 cut(s) 27
BanI GGYRCC 1 cut(s) 97
BbsI GAAGAC 3 cut(s) 969, 993, 1029
BbvI GCAGC 6 cut(s) 317, 674, 808, 889, 1018, 1078
BccI CCATC 3 cut(s) 554, 560, 676
BcgI CGANNNNNNTGC 4 cut(s) 237, 271, 383, 417
BciT130I CCWGG 2 cut(s) 24, 102
BfaI CTAG 3 cut(s) 689, 755, 872
BfrI CTTAAG 1 cut(s) 71
BglII AGATCT 1 cut(s) 211
BisI GCNGC 9 cut(s) 303, 306, 614, 626, 663, 797, 878, 1007, 1067
BlsI GCNGC 9 cut(s) 304, 307, 615, 627, 664, 798, 879, 1008, 1068
Bme1390I CCNGG 2 cut(s) 24, 102
Bme18I GGWCC 2 cut(s) 743, 1048
BmgT120I GGNCC 4 cut(s) 743, 969, 1029, 1048
BmiI GGNNCC 2 cut(s) 99, 612
BmrFI CCNGG 2 cut(s) 24, 102
BmrI ACTGGG 2 cut(s) 976, 1036
BmsI GCATC 2 cut(s) 403, 525
BmuI ACTGGG 2 cut(s) 976, 1036
BpiI GAAGAC 3 cut(s) 969, 993, 1029
Bpu14I TTCGAA 2 cut(s) 174, 423
BpuEI CTTGAG 3 cut(s) 217, 560, 626
BsaJI CCNNGG 6 cut(s) 42, 78, 152, 309, 1017, 1077
BsaXI ACNNNNNCTCC 2 cut(s) 879, 909
Bse1I ACTGG 2 cut(s) 971, 1031
Bse3DI GCAATG 2 cut(s) 635, 806
BseBI CCWGG 2 cut(s) 24, 102
BseDI CCNNGG 6 cut(s) 42, 78, 152, 309, 1017, 1077
BseGI GGATG 3 cut(s) 55, 565, 787
BseMI GCAATG 2 cut(s) 635, 806
BseNI ACTGG 2 cut(s) 971, 1031
BseRI GAGGAG 3 cut(s) 545, 557, 623
BseXI GCAGC 6 cut(s) 317, 674, 808, 889, 1018, 1078
Bsh1236I CGCG 1 cut(s) 259
BshFI GGCC 6 cut(s) 27, 254, 297, 846, 971, 1031
BshNI GGYRCC 1 cut(s) 97
BsiSI CCGG 1 cut(s) 500
BslFI GGGAC 1 cut(s) 24
BsmFI GGGAC 1 cut(s) 24
BsnI GGCC 6 cut(s) 27, 254, 297, 846, 971, 1031
Bsp119I TTCGAA 2 cut(s) 174, 423
Bsp143I GATC 5 cut(s) 7, 130, 211, 408, 589
Bsp19I CCATGG 4 cut(s) 42, 152, 1017, 1077
BspACI CCGC 3 cut(s) 303, 614, 625
BspANI GGCC 6 cut(s) 27, 254, 297, 846, 971, 1031
BspFNI CGCG 1 cut(s) 259
BspHI TCATGA 1 cut(s) 805
BspLI GGNNCC 2 cut(s) 99, 612
BspPI GGATC 4 cut(s) 15, 138, 416, 584
BspT104I TTCGAA 2 cut(s) 174, 423
BspT107I GGYRCC 1 cut(s) 97
BspTI CTTAAG 1 cut(s) 71
BsrDI GCAATG 2 cut(s) 635, 806
BsrI ACTGG 2 cut(s) 971, 1031
BssECI CCNNGG 6 cut(s) 42, 78, 152, 309, 1017, 1077
BssMI GATC 5 cut(s) 7, 130, 211, 408, 589
BssT1I CCWWGG 6 cut(s) 42, 78, 152, 309, 1017, 1077
Bst2UI CCWGG 2 cut(s) 24, 102
Bst4CI ACNGT 1 cut(s) 140
Bst6I CTCTTC 2 cut(s) 351, 522
BstAFI CTTAAG 1 cut(s) 71
BstAPI GCANNNNNTGC 1 cut(s) 445
BstBI TTCGAA 2 cut(s) 174, 423
BstC8I GCNNGC 1 cut(s) 768
BstDEI CTNAG 1 cut(s) 479
BstDSI CCRYGG 4 cut(s) 42, 152, 1017, 1077
BstEII GGTNACC 1 cut(s) 140
BstF5I GGATG 3 cut(s) 55, 565, 787
BstFNI CGCG 1 cut(s) 259
BstKTI GATC 5 cut(s) 10, 133, 214, 411, 592
BstMBI GATC 5 cut(s) 7, 130, 211, 408, 589
BstMWI GCNNNNNNNGC 4 cut(s) 445, 517, 610, 622
BstNI CCWGG 2 cut(s) 24, 102
BstPI GGTNACC 1 cut(s) 140
BstSCI CCNGG 2 cut(s) 22, 100
BstUI CGCG 1 cut(s) 259
BstV1I GCAGC 6 cut(s) 317, 674, 808, 889, 1018, 1078
BstV2I GAAGAC 3 cut(s) 969, 993, 1029
BstX2I RGATCY 2 cut(s) 130, 211
BstXI CCANNNNNNTGG 1 cut(s) 1084
BstYI RGATCY 2 cut(s) 130, 211
BsuRI GGCC 6 cut(s) 27, 254, 297, 846, 971, 1031
BtgI CCRYGG 4 cut(s) 42, 152, 1017, 1077
BtsCI GGATG 3 cut(s) 55, 565, 787
BtsIMutI CAGTG 1 cut(s) 250
Cac8I GCNNGC 1 cut(s) 768
CciI TCATGA 1 cut(s) 805
Cfr13I GGNCC 4 cut(s) 743, 969, 1029, 1048
Csp6I GTAC 4 cut(s) 64, 98, 285, 476
CspCI CAANNNNNGTGG 2 cut(s) 331, 366
CviAII CATG 9 cut(s) 43, 153, 398, 412, 806, 860, 904, 1018, 1078
CviQI GTAC 4 cut(s) 64, 98, 285, 476
DdeI CTNAG 1 cut(s) 479
DpnI GATC 5 cut(s) 9, 132, 213, 410, 591
DpnII GATC 5 cut(s) 7, 130, 211, 408, 589
EaeI YGGCCR 1 cut(s) 25
Eam1104I CTCTTC 2 cut(s) 351, 522
EarI CTCTTC 2 cut(s) 351, 522
Eco130I CCWWGG 6 cut(s) 42, 78, 152, 309, 1017, 1077
Eco147I AGGCCT 1 cut(s) 254
Eco47I GGWCC 2 cut(s) 743, 1048
Eco91I GGTNACC 1 cut(s) 140
EcoO109I RGGNCCY 1 cut(s) 1048
EcoO65I GGTNACC 1 cut(s) 140
EcoRII CCWGG 2 cut(s) 22, 100
EcoT14I CCWWGG 6 cut(s) 42, 78, 152, 309, 1017, 1077
ErhI CCWWGG 6 cut(s) 42, 78, 152, 309, 1017, 1077
FaeI CATG 9 cut(s) 46, 156, 401, 415, 809, 863, 907, 1021, 1081
FalI AAGNNNNNCTT 2 cut(s) 99, 131
FaqI GGGAC 1 cut(s) 24
FatI CATG 9 cut(s) 42, 152, 397, 411, 805, 859, 903, 1017, 1077
FauNDI CATATG 2 cut(s) 12, 882
Fnu4HI GCNGC 9 cut(s) 303, 306, 614, 626, 663, 797, 878, 1007, 1067
FokI GGATG 3 cut(s) 62, 572, 794
Fsp4HI GCNGC 9 cut(s) 303, 306, 614, 626, 663, 797, 878, 1007, 1067
FspBI CTAG 3 cut(s) 689, 755, 872
GluI GCNGC 9 cut(s) 303, 306, 614, 626, 663, 797, 878, 1007, 1067
HaeIII GGCC 6 cut(s) 27, 254, 297, 846, 971, 1031
HapII CCGG 1 cut(s) 500
Hin1II CATG 9 cut(s) 46, 156, 401, 415, 809, 863, 907, 1021, 1081
HinfI GANTC 2 cut(s) 110, 171
HpaII CCGG 1 cut(s) 500
HphI GGTGA 5 cut(s) 94, 152, 217, 575, 848
Hpy166II GTNNAC 2 cut(s) 85, 476
Hpy188I TCNGA 3 cut(s) 270, 378, 649
Hpy188III TCNNGA 4 cut(s) 326, 358, 806, 872
Hpy8I GTNNAC 2 cut(s) 85, 476
HpyAV CCTTC 2 cut(s) 85, 232
HpyCH4III ACNGT 1 cut(s) 140
HpyCH4V TGCA 5 cut(s) 248, 394, 596, 718, 1095
HpyF10VI GCNNNNNNNGC 4 cut(s) 445, 517, 610, 622
HpyF3I CTNAG 1 cut(s) 479
Hsp92II CATG 9 cut(s) 46, 156, 401, 415, 809, 863, 907, 1021, 1081
KpnI GGTACC 1 cut(s) 101
Kzo9I GATC 5 cut(s) 7, 130, 211, 408, 589
LmnI GCTCC 1 cut(s) 610
Lsp1109I GCAGC 6 cut(s) 317, 674, 808, 889, 1018, 1078
LweI GCATC 2 cut(s) 403, 525
MaeI CTAG 3 cut(s) 689, 755, 872
MaeIII GTNAC 1 cut(s) 140
MalI GATC 5 cut(s) 9, 132, 213, 410, 591
MboI GATC 5 cut(s) 7, 130, 211, 408, 589
MflI RGATCY 2 cut(s) 130, 211
MlsI TGGCCA 1 cut(s) 27
MluCI AATT 2 cut(s) 710, 937
MluNI TGGCCA 1 cut(s) 27
MmeI TCCRAC 2 cut(s) 108, 248
Mox20I TGGCCA 1 cut(s) 27
MscI TGGCCA 1 cut(s) 27
MseI TTAA 1 cut(s) 72
MslI CAYNNNNRTG 2 cut(s) 676, 1082
Msp20I TGGCCA 1 cut(s) 27
MspA1I CMGCKG 2 cut(s) 770, 1009
MspCI CTTAAG 1 cut(s) 71
MspI CCGG 1 cut(s) 500
MspR9I CCNGG 2 cut(s) 24, 102
MvaI CCWGG 2 cut(s) 24, 102
MvnI CGCG 1 cut(s) 259
MwoI GCNNNNNNNGC 4 cut(s) 445, 517, 610, 622
NcoI CCATGG 4 cut(s) 42, 152, 1017, 1077
NdeI CATATG 2 cut(s) 12, 882
NdeII GATC 5 cut(s) 7, 130, 211, 408, 589
NlaIII CATG 9 cut(s) 46, 156, 401, 415, 809, 863, 907, 1021, 1081
NlaIV GGNNCC 2 cut(s) 99, 612
NmuCI GTSAC 1 cut(s) 140
NspV TTCGAA 2 cut(s) 174, 423
PagI TCATGA 1 cut(s) 805
PceI AGGCCT 1 cut(s) 254
PfeI GAWTC 2 cut(s) 110, 171
PkrI GCNGC 9 cut(s) 304, 307, 615, 627, 664, 798, 879, 1008, 1068
PpuMI RGGWCCY 1 cut(s) 1048
Psp5II RGGWCCY 1 cut(s) 1048
Psp6I CCWGG 2 cut(s) 22, 100
PspEI GGTNACC 1 cut(s) 140
PspGI CCWGG 2 cut(s) 22, 100
PspN4I GGNNCC 2 cut(s) 99, 612
PspPI GGNCC 4 cut(s) 743, 969, 1029, 1048
PspPPI RGGWCCY 1 cut(s) 1048
PsuI RGATCY 2 cut(s) 130, 211
PvuII CAGCTG 2 cut(s) 770, 1009
RsaI GTAC 4 cut(s) 65, 99, 286, 477
RsaNI GTAC 4 cut(s) 64, 98, 285, 476
RseI CAYNNNNRTG 2 cut(s) 676, 1082
SaqAI TTAA 1 cut(s) 72
SatI GCNGC 9 cut(s) 303, 306, 614, 626, 663, 797, 878, 1007, 1067
Sau3AI GATC 5 cut(s) 7, 130, 211, 408, 589
Sau96I GGNCC 4 cut(s) 743, 969, 1029, 1048
ScrFI CCNGG 2 cut(s) 24, 102
SfaNI GCATC 2 cut(s) 403, 525
SfuI TTCGAA 2 cut(s) 174, 423
SinI GGWCC 2 cut(s) 743, 1048
SmiMI CAYNNNNRTG 2 cut(s) 676, 1082
SmlI CTYRAG 4 cut(s) 71, 196, 539, 605
SmoI CTYRAG 4 cut(s) 71, 196, 539, 605
Sse9I AATT 2 cut(s) 710, 937
SseBI AGGCCT 1 cut(s) 254
SsiI CCGC 3 cut(s) 303, 614, 625
SspMI CTAG 3 cut(s) 689, 755, 872
StuI AGGCCT 1 cut(s) 254
StyD4I CCNGG 2 cut(s) 22, 100
StyI CCWWGG 6 cut(s) 42, 78, 152, 309, 1017, 1077
TaaI ACNGT 1 cut(s) 140
TaqI TCGA 4 cut(s) 174, 423, 702, 921
TasI AATT 2 cut(s) 710, 937
TatI WGTACW 2 cut(s) 63, 475
TauI GCSGC 3 cut(s) 305, 616, 628
TfiI GAWTC 2 cut(s) 110, 171
Tru1I TTAA 1 cut(s) 72
Tru9I TTAA 1 cut(s) 72
TscAI CASTG 1 cut(s) 250
TseFI GTSAC 1 cut(s) 140
TseI GCWGC 6 cut(s) 305, 662, 796, 877, 1006, 1066
Tsp45I GTSAC 1 cut(s) 140
TspDTI ATGAA 8 cut(s) 66, 419, 507, 798, 846, 906, 1010, 1070
TspGWI ACGGA 1 cut(s) 199
TspRI CASTG 1 cut(s) 250
Vha464I CTTAAG 1 cut(s) 71
VpaK11BI GGWCC 2 cut(s) 743, 1048
XapI RAATTY 1 cut(s) 937
XbaI TCTAGA 1 cut(s) 871
XcmI CCANNNNNNNNNTGG 4 cut(s) 159, 675, 979, 1039
XspI CTAG 3 cut(s) 689, 755, 872
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.