MD11G1219300.v1.1
NAC Family

(NAC) domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000076
Physical Location & Seq
Reverse (-)
31987710 .. 31989176
1467 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1219300.v1.1.491

Sequence Viewer

Length: 1467 bp
ATGGCACCTTCTGATACCTTTCCCGTGGGTTACAAGTTTCATCCAAGAGATGACGAGTTAGTCGGATACTATCTGTATAACAAGGTTCGTGGCACACCATTTAGGGATGATAATGTTATTCCTGAGATCGATCTTTATGGTAGCATGGAGGCAAGAGATATATGGAATAACAACGGCGGACAGAATATAGGAAAGGATGAAGACCTTTATTTCTTCACCAAGTTGAAGCCGGCCGCCAAGGGTACGGGTTCCCGAGTGGCTCGCACCATAGGGTCTGGAACATGGAAGGGTGAGACCTCAGGGGCCAAAGTCAAAGATCCCAAGACTAAGGAGACGATAGGTTTCTTTAAAAGGTTTCAATACAAGAATACTAAATATCCTCAAGAAAGCGGTTGCTGGATTATGCACGAGTTCAGCCTTCACCCTAAACAGGTCATGCGCATTAAATCAAGTCCAAGTAGTCGTCTGAATGATGGTGAATATGTAGTCTGCCGGGTTCGAAAGAACTTTGACAGAAAGAGAAAGGCGGATGATCACGAGACTGGAGTATTACAATCCCAGAGCAAAAGGACTCGGATGCAATCAGAGAATATTGATGAATCTTATGTTACTCCAATGTCTTCTGAGGTTAATACCGATCACTACAATCAGCAGCAGCAGGACCAGACTAATATTAATGCAACTAGTACTAGTAGTAGTATTAGTGTGACTAATGTGGATCAGGCACATTACTACTATTGTGAGCCAGCACAGTACTCTGAGGTTATTATTCAGTATGATATACCGCAGCAGCAGGAGCAGGCTACTGCTACTAGTGGTCATCTCAACGGTACAAACTTGTCAACTAGGCTCGCTGAGCAGCAACACTACTTTGTAACACAAGACCCAACTCTGGCTTCTTCATCACTGGCTGTGGCTGGGCCAGACAATCAAGAGCAACAAGTGCAGAGTAATGTAACAGACTTGCCACAATACTTAACAGACTTGCGACAATACTACTATGATACAGTAGTACCAATTACGACTATGCCGATGCCGGATGATTACGTATGTCTCCCTCAGCCAAATTTTGTCGTAGACCCAACTATGGCCTCTTCACTAGGTCTGTCTATGTCTAGCCAAGAAGACTATCTTCAGCACAATGGTTTTGTGAATAATGTTATGGCGGACTTGCCACAGTACTACTGCTCCAGTACACAAGACCCAAGTAGTGGTACTGTTTTCTCTCAATATGATCTGCCGTGGACTGCTACGACTGGATTTGATGATCAGCCACACTACTTCGTTACACAAGACCACCAGCCAGACTACTTTGTTGCCGATCCCACCGTGGCTTCTTCACTAGCTAGTCCATCCAATCTTGATCAGAAACATCATATCATGGATAAGGATCAACTTCCCCCTCTTAATTTTGACTACACCCATGGTGACATCATGATCGACTTGGACGACCTTTGGAACAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

489

Amino Acids

55.41

Weight (kDa)

4.87

Isoelectric Point (pI)

51.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 8 - 140 3e-26 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 59
Acc16I TGCGCA 1 cut(s) 440
AccB1I GGYRCC 1 cut(s) 4
AccB7I CCANNNNNTGG 1 cut(s) 1211
AccI GTMKAC 1 cut(s) 1077
AciI CCGC 6 cut(s) 177, 234, 390, 527, 785, 1166
AclWI GGATC 4 cut(s) 311, 726, 1316, 1398
AcoI YGGCCR 1 cut(s) 231
AcsI RAATTY 1 cut(s) 1066
AcuI CTGAAG 1 cut(s) 1118
AfaI GTAC 8 cut(s) 244, 688, 755, 832, 1014, 1181, 1195, 1216
AfiI CCNNNNNNNGG 4 cut(s) 430, 892, 1087, 1211
AgsI TTSAA 2 cut(s) 226, 359
AhlI ACTAGT 3 cut(s) 683, 689, 812
AjuI GAANNNNNNNTTGG 2 cut(s) 880, 912
AluBI AGCT 1 cut(s) 1346
AluI AGCT 1 cut(s) 1346
Alw26I GTCTC 4 cut(s) 287, 326, 533, 1058
AlwI GGATC 4 cut(s) 311, 726, 1316, 1398
Ama87I CYCGRG 1 cut(s) 252
AoxI GGCC 4 cut(s) 231, 303, 920, 1089
ApeKI GCWGC 5 cut(s) 652, 655, 787, 790, 859
ApoI RAATTY 1 cut(s) 1066
AseI ATTAAT 1 cut(s) 675
AspLEI GCGC 1 cut(s) 441
AspS9I GGNCC 3 cut(s) 303, 661, 920
AsuC2I CCSGG 1 cut(s) 494
AsuHPI GGTGA 5 cut(s) 208, 302, 413, 488, 1439
AsuII TTCGAA 1 cut(s) 499
AvaI CYCGRG 1 cut(s) 252
AvaII GGWCC 1 cut(s) 661
AxyI CCTNAGG 1 cut(s) 298
BaeI ACNNNNGTAYC 4 cut(s) 996, 996, 1029, 1029
BanI GGYRCC 1 cut(s) 4
BauI CACGAG 2 cut(s) 407, 536
BbsI GAAGAC 3 cut(s) 207, 612, 1131
BbvCI CCTCAGC 1 cut(s) 1059
BbvI GCAGC 5 cut(s) 664, 667, 799, 802, 871
BccI CCATC 2 cut(s) 467, 1360
BceAI ACGGC 2 cut(s) 190, 1225
BciVI GTATCC 1 cut(s) 59
BclI TGATCA 3 cut(s) 532, 1267, 1363
BcnI CCSGG 1 cut(s) 494
BcoDI GTCTC 4 cut(s) 287, 326, 533, 1058
BcuI ACTAGT 3 cut(s) 683, 689, 812
BfaI CTAG 8 cut(s) 684, 690, 813, 846, 1100, 1116, 1343, 1347
BfuI GTATCC 1 cut(s) 59
BisI GCNGC 6 cut(s) 234, 653, 656, 788, 791, 860
BlpI GCTNAGC 1 cut(s) 855
BlsI GCNGC 6 cut(s) 235, 654, 657, 789, 792, 861
BmcAI AGTACT 3 cut(s) 688, 755, 1181
Bme1390I CCNGG 1 cut(s) 494
Bme18I GGWCC 1 cut(s) 661
BmeT110I CYCGRG 1 cut(s) 252
BmgT120I GGNCC 3 cut(s) 303, 661, 920
BmiI GGNNCC 3 cut(s) 6, 250, 304
BmrFI CCNGG 1 cut(s) 494
BmsI GCATC 2 cut(s) 567, 1023
BpiI GAAGAC 3 cut(s) 207, 612, 1131
BpmI CTGGAG 2 cut(s) 564, 1174
Bpu10I CCTNAGC 1 cut(s) 1059
Bpu1102I GCTNAGC 1 cut(s) 855
Bpu14I TTCGAA 1 cut(s) 499
BpuEI CTTGAG 1 cut(s) 366
BpuMI CCSGG 1 cut(s) 494
Bsa29I ATCGAT 1 cut(s) 129
BsaAI YACGTR 1 cut(s) 1048
BsaBI GATNNNNATC 1 cut(s) 1389
BsaI GGTCTC 1 cut(s) 287
BsaJI CCNNGG 5 cut(s) 24, 237, 1241, 1329, 1423
BsaXI ACNNNNNCTCC 2 cut(s) 1172, 1202
Bsc4I CCNNNNNNNGG 4 cut(s) 430, 892, 1087, 1211
Bse118I RCCGGY 1 cut(s) 229
Bse1I ACTGG 4 cut(s) 547, 912, 1191, 1261
Bse21I CCTNAGG 1 cut(s) 298
Bse8I GATNNNNATC 1 cut(s) 1389
BseCI ATCGAT 1 cut(s) 129
BseDI CCNNGG 5 cut(s) 24, 237, 1241, 1329, 1423
BseGI GGATG 7 cut(s) 40, 112, 202, 535, 582, 1045, 1352
BseJI GATNNNNATC 1 cut(s) 1389
BseLI CCNNNNNNNGG 4 cut(s) 430, 892, 1087, 1211
BseMII CTCAG 6 cut(s) 114, 312, 615, 750, 846, 1073
BseNI ACTGG 4 cut(s) 547, 912, 1191, 1261
BseX3I CGGCCG 1 cut(s) 231
BseXI GCAGC 5 cut(s) 664, 667, 799, 802, 871
BseYI CCCAGC 1 cut(s) 917
BsgI GTGCAG 1 cut(s) 965
Bsh1285I CGRYCG 1 cut(s) 234
BshFI GGCC 4 cut(s) 233, 305, 922, 1091
BshNI GGYRCC 1 cut(s) 4
BshVI ATCGAT 1 cut(s) 129
BsiEI CGRYCG 1 cut(s) 234
BsiHKCI CYCGRG 1 cut(s) 252
BsiSI CCGG 3 cut(s) 230, 493, 1037
BslI CCNNNNNNNGG 4 cut(s) 430, 892, 1087, 1211
BsmAI GTCTC 4 cut(s) 287, 326, 533, 1058
BsmBI CGTCTC 1 cut(s) 326
BsnI GGCC 4 cut(s) 233, 305, 922, 1091
Bso31I GGTCTC 1 cut(s) 287
BsoBI CYCGRG 1 cut(s) 252
Bsp119I TTCGAA 1 cut(s) 499
Bsp1720I GCTNAGC 1 cut(s) 855
Bsp19I CCATGG 1 cut(s) 1423
BspACI CCGC 6 cut(s) 177, 234, 390, 527, 785, 1166
BspANI GGCC 4 cut(s) 233, 305, 922, 1091
BspCNI CTCAG 6 cut(s) 115, 311, 616, 751, 847, 1072
BspDI ATCGAT 1 cut(s) 129
BspHI TCATGA 1 cut(s) 1434
BspLI GGNNCC 3 cut(s) 6, 250, 304
BspPI GGATC 4 cut(s) 311, 726, 1316, 1398
BspT104I TTCGAA 1 cut(s) 499
BspT107I GGYRCC 1 cut(s) 4
BspTNI GGTCTC 1 cut(s) 287
BsrFI RCCGGY 1 cut(s) 229
BsrI ACTGG 4 cut(s) 547, 912, 1191, 1261
BssAI RCCGGY 1 cut(s) 229
BssECI CCNNGG 5 cut(s) 24, 237, 1241, 1329, 1423
BssSI CACGAG 2 cut(s) 407, 536
BssT1I CCWWGG 2 cut(s) 237, 1423
Bst2BI CACGAG 2 cut(s) 407, 536
Bst4CI ACNGT 6 cut(s) 753, 830, 1009, 1179, 1219, 1330
Bst6I CTCTTC 1 cut(s) 1099
BstAPI GCANNNNNTGC 1 cut(s) 943
BstBAI YACGTR 1 cut(s) 1048
BstBI TTCGAA 1 cut(s) 499
BstC8I GCNNGC 5 cut(s) 231, 262, 747, 801, 852
BstDEI CTNAG 7 cut(s) 123, 298, 327, 624, 759, 855, 1059
BstDSI CCRYGG 4 cut(s) 24, 1241, 1329, 1423
BstF5I GGATG 7 cut(s) 40, 112, 202, 535, 582, 1045, 1352
BstHHI GCGC 1 cut(s) 441
BstMAI GTCTC 4 cut(s) 287, 326, 533, 1058
BstMCI CGRYCG 1 cut(s) 234
BstMWI GCNNNNNNNGC 3 cut(s) 796, 856, 943
BstSCI CCNGG 1 cut(s) 492
BstSNI TACGTA 1 cut(s) 1048
BstV1I GCAGC 5 cut(s) 664, 667, 799, 802, 871
BstV2I GAAGAC 3 cut(s) 207, 612, 1131
BstX2I RGATCY 1 cut(s) 316
BstYI RGATCY 1 cut(s) 316
BstZI CGGCCG 1 cut(s) 231
Bsu15I ATCGAT 1 cut(s) 129
Bsu36I CCTNAGG 1 cut(s) 298
BsuI GTATCC 1 cut(s) 59
BsuRI GGCC 4 cut(s) 233, 305, 922, 1091
BsuTUI ATCGAT 1 cut(s) 129
BtgI CCRYGG 4 cut(s) 24, 1241, 1329, 1423
BtsCI GGATG 7 cut(s) 40, 112, 202, 535, 582, 1045, 1352
BtsIMutI CAGTG 1 cut(s) 905
Cac8I GCNNGC 5 cut(s) 231, 262, 747, 801, 852
CciI TCATGA 1 cut(s) 1434
CfoI GCGC 1 cut(s) 441
Cfr10I RCCGGY 1 cut(s) 229
Cfr13I GGNCC 3 cut(s) 303, 661, 920
ClaI ATCGAT 1 cut(s) 129
Csp6I GTAC 8 cut(s) 243, 687, 754, 831, 1013, 1180, 1194, 1215
CspCI CAANNNNNGTGG 2 cut(s) 70, 105
CviAII CATG 6 cut(s) 145, 282, 436, 1381, 1424, 1435
CviQI GTAC 8 cut(s) 243, 687, 754, 831, 1013, 1180, 1194, 1215
DdeI CTNAG 7 cut(s) 123, 298, 327, 624, 759, 855, 1059
DraI TTTAAA 1 cut(s) 349
DrdI GACNNNNNNGTC 1 cut(s) 59
DseDI GACNNNNNNGTC 1 cut(s) 59
EaeI YGGCCR 1 cut(s) 231
EagI CGGCCG 1 cut(s) 231
Eam1104I CTCTTC 1 cut(s) 1099
EarI CTCTTC 1 cut(s) 1099
EciI GGCGGA 3 cut(s) 192, 542, 1181
EclXI CGGCCG 1 cut(s) 231
Eco105I TACGTA 1 cut(s) 1048
Eco130I CCWWGG 2 cut(s) 237, 1423
Eco31I GGTCTC 1 cut(s) 287
Eco47I GGWCC 1 cut(s) 661
Eco52I CGGCCG 1 cut(s) 231
Eco57I CTGAAG 1 cut(s) 1118
Eco81I CCTNAGG 1 cut(s) 298
Eco88I CYCGRG 1 cut(s) 252
EcoT14I CCWWGG 2 cut(s) 237, 1423
ErhI CCWWGG 2 cut(s) 237, 1423
Esp3I CGTCTC 1 cut(s) 326
FaeI CATG 6 cut(s) 148, 285, 439, 1384, 1427, 1438
FalI AAGNNNNNCTT 2 cut(s) 1116, 1148
FatI CATG 6 cut(s) 144, 281, 435, 1380, 1423, 1434
FbaI TGATCA 3 cut(s) 532, 1267, 1363
FblI GTMKAC 1 cut(s) 1077
Fnu4HI GCNGC 6 cut(s) 234, 653, 656, 788, 791, 860
FokI GGATG 7 cut(s) 27, 119, 209, 542, 589, 1052, 1339
Fsp4HI GCNGC 6 cut(s) 234, 653, 656, 788, 791, 860
FspAI RTGCGCAY 1 cut(s) 440
FspBI CTAG 8 cut(s) 684, 690, 813, 846, 1100, 1116, 1343, 1347
FspI TGCGCA 1 cut(s) 440
GlaI GCGC 1 cut(s) 440
GluI GCNGC 6 cut(s) 234, 653, 656, 788, 791, 860
GsaI CCCAGC 1 cut(s) 921
GsuI CTGGAG 2 cut(s) 564, 1174
HaeIII GGCC 4 cut(s) 233, 305, 922, 1091
HapII CCGG 3 cut(s) 230, 493, 1037
HhaI GCGC 1 cut(s) 441
Hin1II CATG 6 cut(s) 148, 285, 439, 1384, 1427, 1438
Hin6I GCGC 1 cut(s) 439
HinP1I GCGC 1 cut(s) 439
HincII GTYRAC 1 cut(s) 843
HindII GTYRAC 1 cut(s) 843
HinfI GANTC 2 cut(s) 571, 599
HpaII CCGG 3 cut(s) 230, 493, 1037
HphI GGTGA 5 cut(s) 208, 302, 413, 488, 1439
Hpy166II GTNNAC 4 cut(s) 843, 1078, 1196, 1245
Hpy188I TCNGA 8 cut(s) 13, 65, 468, 576, 586, 625, 760, 1368
Hpy188III TCNNGA 8 cut(s) 122, 252, 276, 383, 536, 932, 1361, 1435
Hpy8I GTNNAC 4 cut(s) 843, 1078, 1196, 1245
HpyAV CCTTC 3 cut(s) 18, 280, 428
HpyCH4III ACNGT 6 cut(s) 753, 830, 1009, 1179, 1219, 1330
HpyCH4IV ACGT 1 cut(s) 1047
HpyCH4V TGCA 4 cut(s) 406, 580, 680, 946
HpyF10VI GCNNNNNNNGC 3 cut(s) 796, 856, 943
HpyF3I CTNAG 7 cut(s) 123, 298, 327, 624, 759, 855, 1059
HpySE526I ACGT 1 cut(s) 1047
Hsp92II CATG 6 cut(s) 148, 285, 439, 1384, 1427, 1438
HspAI GCGC 1 cut(s) 439
KroI GCCGGC 1 cut(s) 229
KroNI GCCGGC 1 cut(s) 231
Ksp22I TGATCA 3 cut(s) 532, 1267, 1363
LmnI GCTCC 2 cut(s) 796, 1193
Lsp1109I GCAGC 5 cut(s) 664, 667, 799, 802, 871
LweI GCATC 2 cut(s) 567, 1023
MaeI CTAG 8 cut(s) 684, 690, 813, 846, 1100, 1116, 1343, 1347
MaeII ACGT 1 cut(s) 1047
MaeIII GTNAC 7 cut(s) 29, 607, 706, 874, 955, 1285, 1427
MboII GAAGA 8 cut(s) 205, 212, 612, 891, 1086, 1124, 1136, 1329
MflI RGATCY 1 cut(s) 316
MluCI AATT 4 cut(s) 1017, 1066, 1408, 1462
MlyI GAGTC 1 cut(s) 565
MmeI TCCRAC 1 cut(s) 43
MnlI CCTC 8 cut(s) 142, 307, 390, 619, 754, 1068, 1102, 1413
MroNI GCCGGC 1 cut(s) 229
MseI TTAA 7 cut(s) 348, 444, 630, 675, 977, 1407, 1465
MspI CCGG 3 cut(s) 230, 493, 1037
MspR9I CCNGG 1 cut(s) 494
MwoI GCNNNNNNNGC 3 cut(s) 796, 856, 943
NaeI GCCGGC 1 cut(s) 231
NciI CCSGG 1 cut(s) 494
NcoI CCATGG 1 cut(s) 1423
NgoMIV GCCGGC 1 cut(s) 229
NlaIII CATG 6 cut(s) 148, 285, 439, 1384, 1427, 1438
NlaIV GGNNCC 3 cut(s) 6, 250, 304
NmuCI GTSAC 2 cut(s) 706, 1427
NsbI TGCGCA 1 cut(s) 440
NspV TTCGAA 1 cut(s) 499
PagI TCATGA 1 cut(s) 1434
PcsI WCGNNNNNNNCGW 2 cut(s) 1028, 1446
PdiI GCCGGC 1 cut(s) 231
PfeI GAWTC 1 cut(s) 599
PflMI CCANNNNNTGG 1 cut(s) 1211
PkrI GCNGC 6 cut(s) 235, 654, 657, 789, 792, 861
PleI GAGTC 1 cut(s) 565
PpsI GAGTC 1 cut(s) 565
Ppu21I YACGTR 1 cut(s) 1048
PshBI ATTAAT 1 cut(s) 675
PspFI CCCAGC 1 cut(s) 917
PspN4I GGNNCC 3 cut(s) 6, 250, 304
PspPI GGNCC 3 cut(s) 303, 661, 920
PsuI RGATCY 1 cut(s) 316
RsaI GTAC 8 cut(s) 244, 688, 755, 832, 1014, 1181, 1195, 1216
RsaNI GTAC 8 cut(s) 243, 687, 754, 831, 1013, 1180, 1194, 1215
SaqAI TTAA 7 cut(s) 348, 444, 630, 675, 977, 1407, 1465
SatI GCNGC 6 cut(s) 234, 653, 656, 788, 791, 860
Sau96I GGNCC 3 cut(s) 303, 661, 920
ScaI AGTACT 3 cut(s) 688, 755, 1181
SchI GAGTC 1 cut(s) 565
ScrFI CCNGG 1 cut(s) 494
SfaNI GCATC 2 cut(s) 567, 1023
SfuI TTCGAA 1 cut(s) 499
SinI GGWCC 1 cut(s) 661
SmlI CTYRAG 1 cut(s) 381
SmoI CTYRAG 1 cut(s) 381
SnaBI TACGTA 1 cut(s) 1048
SpeI ACTAGT 3 cut(s) 683, 689, 812
Sse9I AATT 4 cut(s) 1017, 1066, 1408, 1462
SsiI CCGC 6 cut(s) 177, 234, 390, 527, 785, 1166
SspI AATATT 2 cut(s) 592, 673
SspMI CTAG 8 cut(s) 684, 690, 813, 846, 1100, 1116, 1343, 1347
StyD4I CCNGG 1 cut(s) 492
StyI CCWWGG 2 cut(s) 237, 1423
TaaI ACNGT 6 cut(s) 753, 830, 1009, 1179, 1219, 1330
TaiI ACGT 1 cut(s) 1050
TaqI TCGA 3 cut(s) 129, 499, 1440
TasI AATT 4 cut(s) 1017, 1066, 1408, 1462
TatI WGTACW 4 cut(s) 686, 753, 1179, 1193
TauI GCSGC 1 cut(s) 236
TfiI GAWTC 1 cut(s) 599
Tru1I TTAA 7 cut(s) 348, 444, 630, 675, 977, 1407, 1465
Tru9I TTAA 7 cut(s) 348, 444, 630, 675, 977, 1407, 1465
TscAI CASTG 1 cut(s) 912
TseFI GTSAC 2 cut(s) 706, 1427
TseI GCWGC 5 cut(s) 652, 655, 787, 790, 859
Tsp45I GTSAC 2 cut(s) 706, 1427
TspDTI ATGAA 4 cut(s) 29, 213, 612, 891
TspRI CASTG 1 cut(s) 912
Van91I CCANNNNNTGG 1 cut(s) 1211
VpaK11BI GGWCC 1 cut(s) 661
VspI ATTAAT 1 cut(s) 675
XapI RAATTY 1 cut(s) 1066
XmiI GTMKAC 1 cut(s) 1077
XspI CTAG 8 cut(s) 684, 690, 813, 846, 1100, 1116, 1343, 1347
ZrmI AGTACT 3 cut(s) 688, 755, 1181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.