Rorug07G0294300
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000076
Physical Location & Seq
Reverse (-)
28757937 .. 28764554
6618 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0294300.1

Sequence Viewer

Length: 2673 bp
ATGACGATCAACTCTCTGCTGCAAAAGCCGACCTCCTCCTCCTCCTCCTCTTTGCCCATAACAAACACAAAAAATAGCATTCTTGCCGCTTCTGTTGAGGTTGAAGAAGCTGAAGCAGCACTGATGAATACTAGTATTTCATCAGCAGAGAATAATGAGGCAGTTACGGTGAAGGCAGTGGTTACAGTGAAAATAACAACGGGAAGCCTGCTCTCCAACTTGTTTGGTTTGACAGCACCCCTCGATCTTTTCACTGATTTGCTCGGAAAAACCTTTCTTCTTGAGCTTGTTAGCACCGAGCTTGACCCTGATACTGGGTTGGAGAAGAAAACAATCCACGGATATGCGCACAAAGTGACCAGAATTGACGACGAGGTGAGGTATGAGAGCTCCTTCACCCTCCCAGCGGGTTTCGGAGAGGTGGGAGCTGTTCTGTTTGAAAATCAGCACCACGAGGAGCTTTACATCAAGACCATACATTTACACATCAATGGCTTCCCAGACCCTTCTGTGGTTACTGTCCCTTGTGATTCATGGGCTCACTCCAAGCATGTCAATCCAGACAAGAGAATCTTCTTCACCAGCAAGTCTTACTTACCATCAGAGACACCAAGTGGGTTGAGGAGGATAAGAGAACTGGAGCTGCAATATTTGCGAGGAAATGGGGAGGGTGAAAGAAAAACGTCCGACAGAATTTATGATTATGATACATACAATGATCTTGGAAATCCTGATAGCGAAGATGATTTGGCCAGGCCCGTGCTTGGCGGCAAAGAGCATCCATACCCGAGGCGCTGCAGAACAGGACGACCACGCACCAAAAAGGATCCATTATCGGAGGAAAGAAGCAGCAGTGTGTATGTACCAAGAGATGAAGCTTTCGCAGAGGTGAAACAACTGACATTTGCGGCAAAGGCCCTGAAATCCGTGCTGCACGCATTGCTTCCGCAGCTTGAGATGTCACTTATTAATCCAAACCTAGGATTTCCCTACTTCACAGCCATAGATTCGCTGTTTAATGAAGGAGTCACAATGCCTAAGCCAAAAACTAGTGGGCTTTTTCAATCCGTCATCCCAAGGCTAGTGAAGGCTGTTAGTGACAGCCAAGACGATCTTTTGCTTTTTGAGACCCCTGAAATAATCGATCGTGATAAATTTTCCTGGTTTAGAGATGAAGAATTTTCCCGGCAAACTCTAGCTGGTCTTAATCCATTTAGTATAGAGCTAGTCAAGGAGTGGCCATTGAAAAGTAAACTGGACCCCAAAATTTATGGTCCACCTGAATCATTGATCACAACAGAACTTGTGGAGAAAGAAATCAGAGGTTGTATGACTGTCAATGAGGCCTTGAAAAGAAAGAAGATGTTTATGTTGGATTATCATGATCTGCTCATGCCTTATGTAAATAAAGTGAGAGAGATTGAAGGGACCACATTGTATGGTTCTAGGACACTGTTCTTCCTCACTGAAGAAGGCACATTGAGGCTTGTTGCCATTGAACTAACTCGCCCACCTGTTGGTGACAAGCCACAATGGAAGCAAGTGTTTACTCCTACCTGGGATGCCACTGGATGCTGGCTGTGGAGACTCGCTAAAGCGCATGTTTGTGCTCATGATGCTGGCTATCATCAGCTTGTCATCCACTGGCTGAGAACTCATTGTTGTACGGAGCCATACATAATTGCCGCCAATCGCCAATTAAGTGCAATGCATCCCATCTATAGACTTCTACTTCCTCATTTTCGGTACACAATGGAAATCAATGCCCTGGCTCGAGAAAGCCTCATCAATGCAGGTGGAATCATTGAGACCTCCTTCTCACCGGCAAAGTACTCCATTGAGCTCAGTTCAGCTGCTTATGACAAGTTCTGGCGCTTTGACACGGAAGCTTTGCCAGCAGATTTGATCAGAAGGGGAATGGCAGTTGAGGATCCCACAGCTGAGCATGGCTTAAAGCTAACAATTGAAGACTACCCATTTGCAAATGATGGCCTCATTCTTTGGGATGCTATTAAGGAGTGGGTGAGGGACTATGTGAACAACTACTATCCAGACCCAACTCTTGTTGAGAATGATCAAGAACTTCAAGCTTGGTGGACAGAAGTTAGAACAAAAGGCCACGCTGACAAAAAGGATGAGCCATGGTGGCCAGTTCTGAATACCCCAGATAACCTAATACATGTTTTGACAACAATAATTTGGGTAACAGCTGGTCATCATGCAGCGGTAAACTTTGGCCAGTATATGTATGCCGGATACTTTCCAAACCGACCTACAATAGCTCGAACCAACATGCCAACTGAAGATCCATCTGAGGAGTATTTCAACAACTTTTTGAAGAAGCCGGAGTCTGCATTGCTAATGTGCTTCCCCTCACAGATCCAAGCAACCAAAGTGATGGCTGTCTTAGACGTGTTATCGAACCATTCACCTGATGAGGAGTATCTTGGTGAGAAAATGGAGTCCTCTTGGGCTGAAAATCCTGTCATCAAGGCTGCATTTGAGCGCTTCAATGGGAATTTGAAAAAGCTAGAAGCAATAATTGATGAGAGGAATACTAATATAAACCTGAAAAACAGAGTTGGAGCAGGGGTGGTTCCATATGAGCTTTTGAAGCCATTCTCAAAGCCTGGGGTCACAGGAATGGGAGTTCCTAATAGTATTTCAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

890

Amino Acids

100.67

Weight (kDa)

5.56

Isoelectric Point (pI)

40.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 123 - 193 5.9e-07 PLAT/LH2 domain
Lipoxygenase PF00305 206 - 873 0.0 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1784
Acc16I TGCGCA 1 cut(s) 348
Acc36I ACCTGC 1 cut(s) 1784
AccB7I CCANNNNNTGG 1 cut(s) 1517
AciI CCGC 7 cut(s) 87, 407, 768, 908, 947, 1686, 2225
AclWI GGATC 6 cut(s) 821, 834, 1925, 1938, 2300, 2374
AcoI YGGCCR 4 cut(s) 750, 1238, 2147, 2236
AcsI RAATTY 5 cut(s) 693, 1154, 1178, 1266, 2518
AcuI CTGAAG 3 cut(s) 132, 1488, 2322
AdeI CACNNNGTG 2 cut(s) 355, 614
AfaI GTAC 4 cut(s) 864, 1666, 1748, 1832
AfeI AGCGCT 1 cut(s) 2507
AfiI CCNNNNNNNGG 6 cut(s) 314, 406, 511, 764, 980, 1517
AflIII ACRYGT 2 cut(s) 2179, 2412
AhlI ACTAGT 2 cut(s) 131, 1049
AjiI CACGTC 1 cut(s) 2413
AjnI CCWGG 5 cut(s) 752, 1160, 1556, 1767, 2629
AloI GAACNNNNNNTCC 2 cut(s) 2634, 2666
Alw21I GWGCWC 3 cut(s) 392, 1612, 1845
Alw26I GTCTC 4 cut(s) 599, 1121, 1579, 1802
AlwI GGATC 6 cut(s) 821, 834, 1925, 1938, 2300, 2374
Ama87I CYCGRG 2 cut(s) 787, 1773
Aor51HI AGCGCT 1 cut(s) 2507
AoxI GGCC 9 cut(s) 750, 755, 915, 1238, 1344, 1990, 2116, 2147, 2236
ApoI RAATTY 5 cut(s) 693, 1154, 1178, 1266, 2518
ArsI GACNNNNNNTTYG 2 cut(s) 1961, 1993
AseI ATTAAT 1 cut(s) 969
Asp700I GAANNNNTTC 1 cut(s) 2618
AspA2I CCTAGG 1 cut(s) 979
AspLEI GCGC 5 cut(s) 349, 795, 1600, 1875, 2508
AspS9I GGNCC 5 cut(s) 756, 916, 1258, 1274, 1428
AsuC2I CCSGG 1 cut(s) 1186
AvaI CYCGRG 2 cut(s) 787, 1773
AvaII GGWCC 3 cut(s) 1258, 1274, 1428
AvrII CCTAGG 1 cut(s) 979
BalI TGGCCA 4 cut(s) 752, 1240, 2149, 2238
BamHI GGATCC 2 cut(s) 826, 1930
BanII GRGCYC 3 cut(s) 392, 541, 1845
BauI CACGAG 1 cut(s) 452
BbsI GAAGAC 1 cut(s) 1974
Bbv12I GWGCWC 3 cut(s) 392, 1612, 1845
BccI CCATC 5 cut(s) 607, 1724, 1982, 2317, 2392
BciT130I CCWGG 5 cut(s) 754, 1162, 1558, 1769, 2631
BciVI GTATCC 1 cut(s) 2249
BclI TGATCA 3 cut(s) 1290, 1905, 2074
BcnI CCSGG 1 cut(s) 1186
BcoDI GTCTC 4 cut(s) 599, 1121, 1579, 1802
BcuI ACTAGT 2 cut(s) 131, 1049
BfaI CTAG 8 cut(s) 132, 980, 1050, 1082, 1196, 1226, 1446, 2531
BfmI CTRYAG 2 cut(s) 796, 1720
BfoI RGCGCY 3 cut(s) 796, 1876, 2509
BfuAI ACCTGC 1 cut(s) 1784
BfuI GTATCC 1 cut(s) 2249
BglI GCCNNNNNGGC 1 cut(s) 2146
BlnI CCTAGG 1 cut(s) 979
BlpI GCTNAGC 1 cut(s) 1941
BmcAI AGTACT 1 cut(s) 1832
Bme1390I CCNGG 6 cut(s) 754, 1162, 1186, 1558, 1769, 2631
Bme18I GGWCC 3 cut(s) 1258, 1274, 1428
BmeT110I CYCGRG 2 cut(s) 787, 1773
BmgBI CACGTC 1 cut(s) 2413
BmgT120I GGNCC 5 cut(s) 756, 916, 1258, 1274, 1428
BmiI GGNNCC 6 cut(s) 828, 1260, 1429, 1671, 1932, 2598
BmrFI CCNGG 6 cut(s) 754, 1162, 1186, 1558, 1769, 2631
BmrI ACTGGG 1 cut(s) 324
BmsI GCATC 6 cut(s) 787, 1552, 1562, 1606, 1720, 1996
BmuI ACTGGG 1 cut(s) 324
BpiI GAAGAC 1 cut(s) 1974
BplI GAGNNNNNCTC 2 cut(s) 1767, 1799
BpmI CTGGAG 1 cut(s) 659
Bpu10I CCTNAGC 1 cut(s) 1038
Bpu1102I GCTNAGC 1 cut(s) 1941
BpuEI CTTGAG 2 cut(s) 302, 974
BpuMI CCSGG 1 cut(s) 1186
Bsa29I ATCGAT 1 cut(s) 1143
BsaI GGTCTC 2 cut(s) 1121, 1802
BsaJI CCNNGG 8 cut(s) 337, 788, 979, 1076, 1557, 1767, 2141, 2630
BsaXI ACNNNNNCTCC 2 cut(s) 2577, 2607
Bsc4I CCNNNNNNNGG 6 cut(s) 314, 406, 511, 764, 980, 1517
Bse118I RCCGGY 1 cut(s) 1822
Bse1I ACTGG 7 cut(s) 319, 642, 1260, 1573, 1649, 2150, 2239
Bse3DI GCAATG 3 cut(s) 938, 1713, 2354
BseBI CCWGG 5 cut(s) 754, 1162, 1558, 1769, 2631
BseCI ATCGAT 1 cut(s) 1143
BseDI CCNNGG 8 cut(s) 337, 788, 979, 1076, 1557, 1767, 2141, 2630
BseGI GGATG 8 cut(s) 778, 1071, 1567, 1577, 1638, 1711, 2011, 2140
BseLI CCNNNNNNNGG 6 cut(s) 314, 406, 511, 764, 980, 1517
BseMI GCAATG 3 cut(s) 938, 1713, 2354
BseMII CTCAG 4 cut(s) 1640, 1858, 1932, 2304
BseNI ACTGG 7 cut(s) 319, 642, 1260, 1573, 1649, 2150, 2239
BseRI GAGGAG 9 cut(s) 25, 28, 31, 34, 37, 470, 637, 2330, 2453
BseYI CCCAGC 1 cut(s) 403
BsgI GTGCAG 1 cut(s) 917
Bsh1285I CGRYCG 1 cut(s) 1147
BshFI GGCC 9 cut(s) 752, 757, 917, 1240, 1346, 1992, 2118, 2149, 2238
BshVI ATCGAT 1 cut(s) 1143
BsiEI CGRYCG 1 cut(s) 1147
BsiHKAI GWGCWC 3 cut(s) 392, 1612, 1845
BsiHKCI CYCGRG 2 cut(s) 787, 1773
BsiSI CCGG 4 cut(s) 1186, 1823, 2253, 2345
BslFI GGGAC 3 cut(s) 506, 1441, 2042
BslI CCNNNNNNNGG 6 cut(s) 314, 406, 511, 764, 980, 1517
BsmAI GTCTC 4 cut(s) 599, 1121, 1579, 1802
BsmFI GGGAC 3 cut(s) 506, 1441, 2042
BsmI GAATGC 1 cut(s) 78
BsnI GGCC 9 cut(s) 752, 757, 917, 1240, 1346, 1992, 2118, 2149, 2238
Bso31I GGTCTC 2 cut(s) 1121, 1802
BsoBI CYCGRG 2 cut(s) 787, 1773
Bsp1286I GDGCHC 4 cut(s) 392, 541, 1612, 1845
Bsp1720I GCTNAGC 1 cut(s) 1941
Bsp19I CCATGG 1 cut(s) 2141
BspACI CCGC 7 cut(s) 87, 407, 768, 908, 947, 1686, 2225
BspANI GGCC 9 cut(s) 752, 757, 917, 1240, 1346, 1992, 2118, 2149, 2238
BspCNI CTCAG 4 cut(s) 1641, 1857, 1933, 2305
BspDI ATCGAT 1 cut(s) 1143
BspHI TCATGA 2 cut(s) 1381, 1612
BspLI GGNNCC 6 cut(s) 828, 1260, 1429, 1671, 1932, 2598
BspMAI CTGCAG 1 cut(s) 800
BspMI ACCTGC 1 cut(s) 1784
BspPI GGATC 6 cut(s) 821, 834, 1925, 1938, 2300, 2374
BspTNI GGTCTC 2 cut(s) 1121, 1802
BsrDI GCAATG 3 cut(s) 938, 1713, 2354
BsrFI RCCGGY 1 cut(s) 1822
BsrI ACTGG 7 cut(s) 319, 642, 1260, 1573, 1649, 2150, 2239
BssAI RCCGGY 1 cut(s) 1822
BssECI CCNNGG 8 cut(s) 337, 788, 979, 1076, 1557, 1767, 2141, 2630
BssSI CACGAG 1 cut(s) 452
BssT1I CCWWGG 3 cut(s) 979, 1076, 2141
Bst2BI CACGAG 1 cut(s) 452
Bst2UI CCWGG 5 cut(s) 754, 1162, 1558, 1769, 2631
Bst4CI ACNGT 5 cut(s) 169, 187, 520, 1336, 1455
BstAPI GCANNNNNTGC 2 cut(s) 652, 940
BstC8I GCNNGC 5 cut(s) 209, 936, 1577, 1621, 1896
BstDEI CTNAG 6 cut(s) 1038, 1649, 1844, 1941, 2313, 2407
BstDSI CCRYGG 2 cut(s) 337, 2141
BstF5I GGATG 8 cut(s) 778, 1071, 1567, 1577, 1638, 1711, 2011, 2140
BstH2I RGCGCY 3 cut(s) 796, 1876, 2509
BstHHI GCGC 5 cut(s) 349, 795, 1600, 1875, 2508
BstMAI GTCTC 4 cut(s) 599, 1121, 1579, 1802
BstMCI CGRYCG 1 cut(s) 1147
BstNI CCWGG 5 cut(s) 754, 1162, 1558, 1769, 2631
BstNSI RCATGY 4 cut(s) 554, 1604, 2183, 2296
BstSCI CCNGG 6 cut(s) 752, 1160, 1184, 1556, 1767, 2629
BstSFI CTRYAG 2 cut(s) 796, 1720
BstV2I GAAGAC 1 cut(s) 1974
BstX2I RGATCY 4 cut(s) 826, 1930, 2305, 2379
BstXI CCANNNNNNTGG 1 cut(s) 2398
BstYI RGATCY 4 cut(s) 826, 1930, 2305, 2379
Bsu15I ATCGAT 1 cut(s) 1143
BsuI GTATCC 1 cut(s) 2249
BsuRI GGCC 9 cut(s) 752, 757, 917, 1240, 1346, 1992, 2118, 2149, 2238
BsuTUI ATCGAT 1 cut(s) 1143
BtgI CCRYGG 2 cut(s) 337, 2141
BtrI CACGTC 1 cut(s) 2413
BtsCI GGATG 8 cut(s) 778, 1071, 1567, 1577, 1638, 1711, 2011, 2140
BtsI GCAGTG 2 cut(s) 183, 859
BtsIMutI CAGTG 9 cut(s) 119, 183, 192, 252, 859, 1451, 1464, 1566, 1642
BveI ACCTGC 1 cut(s) 1784
Cac8I GCNNGC 5 cut(s) 209, 936, 1577, 1621, 1896
CciI TCATGA 2 cut(s) 1381, 1612
CfoI GCGC 5 cut(s) 349, 795, 1600, 1875, 2508
Cfr10I RCCGGY 1 cut(s) 1822
Cfr13I GGNCC 5 cut(s) 756, 916, 1258, 1274, 1428
ClaI ATCGAT 1 cut(s) 1143
Csp6I GTAC 4 cut(s) 863, 1665, 1747, 1831
CspCI CAANNNNNGTGG 4 cut(s) 1777, 1812, 2075, 2110
CviQI GTAC 4 cut(s) 863, 1665, 1747, 1831
DdeI CTNAG 6 cut(s) 1038, 1649, 1844, 1941, 2313, 2407
DraIII CACNNNGTG 2 cut(s) 355, 614
EaeI YGGCCR 4 cut(s) 750, 1238, 2147, 2236
Ecl136II GAGCTC 2 cut(s) 390, 1843
Eco130I CCWWGG 3 cut(s) 979, 1076, 2141
Eco147I AGGCCT 1 cut(s) 1346
Eco24I GRGCYC 3 cut(s) 392, 541, 1845
Eco31I GGTCTC 2 cut(s) 1121, 1802
Eco47I GGWCC 3 cut(s) 1258, 1274, 1428
Eco47III AGCGCT 1 cut(s) 2507
Eco53kI GAGCTC 2 cut(s) 390, 1843
Eco57I CTGAAG 3 cut(s) 132, 1488, 2322
Eco88I CYCGRG 2 cut(s) 787, 1773
EcoICRI GAGCTC 2 cut(s) 390, 1843
EcoO109I RGGNCCY 1 cut(s) 916
EcoRII CCWGG 5 cut(s) 752, 1160, 1556, 1767, 2629
EcoT14I CCWWGG 3 cut(s) 979, 1076, 2141
EcoT22I ATGCAT 1 cut(s) 1713
EcoT38I GRGCYC 3 cut(s) 392, 541, 1845
ErhI CCWWGG 3 cut(s) 979, 1076, 2141
FalI AAGNNNNNCTT 6 cut(s) 557, 589, 578, 610, 1098, 1130
FaqI GGGAC 3 cut(s) 506, 1441, 2042
FauI CCCGC 1 cut(s) 400
FauNDI CATATG 1 cut(s) 2602
FbaI TGATCA 3 cut(s) 1290, 1905, 2074
FokI GGATG 8 cut(s) 765, 1058, 1574, 1584, 1625, 1698, 2018, 2147
FriOI GRGCYC 3 cut(s) 392, 541, 1845
FspAI RTGCGCAY 1 cut(s) 348
FspBI CTAG 8 cut(s) 132, 980, 1050, 1082, 1196, 1226, 1446, 2531
FspI TGCGCA 1 cut(s) 348
GlaI GCGC 5 cut(s) 348, 794, 1599, 1874, 2507
GsaI CCCAGC 1 cut(s) 407
GsuI CTGGAG 1 cut(s) 659
HaeII RGCGCY 3 cut(s) 796, 1876, 2509
HaeIII GGCC 9 cut(s) 752, 757, 917, 1240, 1346, 1992, 2118, 2149, 2238
HapII CCGG 4 cut(s) 1186, 1823, 2253, 2345
HhaI GCGC 5 cut(s) 349, 795, 1600, 1875, 2508
Hin6I GCGC 5 cut(s) 347, 793, 1598, 1873, 2506
HinP1I GCGC 5 cut(s) 347, 793, 1598, 1873, 2506
HindIII AAGCTT 3 cut(s) 876, 1887, 2088
HinfI GANTC 9 cut(s) 530, 570, 1007, 1026, 1283, 1587, 1800, 2348, 2462
HpaII CCGG 4 cut(s) 1186, 1823, 2253, 2345
Hpy166II GTNNAC 7 cut(s) 1253, 1277, 1548, 1749, 2038, 2097, 2230
Hpy188I TCNGA 9 cut(s) 266, 416, 604, 688, 838, 1322, 1910, 2157, 2314
Hpy8I GTNNAC 7 cut(s) 1253, 1277, 1548, 1749, 2038, 2097, 2230
Hpy99I CGWCG 1 cut(s) 374
HpyAV CCTTC 9 cut(s) 166, 403, 516, 1016, 1081, 1418, 1466, 1825, 1905
HpyCH4III ACNGT 5 cut(s) 169, 187, 520, 1336, 1455
HpyCH4IV ACGT 2 cut(s) 683, 2412
HpyF3I CTNAG 6 cut(s) 1038, 1649, 1844, 1941, 2313, 2407
HpySE526I ACGT 2 cut(s) 683, 2412
HspAI GCGC 5 cut(s) 347, 793, 1598, 1873, 2506
Ksp22I TGATCA 3 cut(s) 1290, 1905, 2074
LmnI GCTCC 6 cut(s) 395, 425, 457, 640, 1669, 2585
LweI GCATC 6 cut(s) 787, 1552, 1562, 1606, 1720, 1996
MaeI CTAG 8 cut(s) 132, 980, 1050, 1082, 1196, 1226, 1446, 2531
MaeII ACGT 2 cut(s) 683, 2412
MfeI CAATTG 1 cut(s) 1962
MflI RGATCY 4 cut(s) 826, 1930, 2305, 2379
MhlI GDGCHC 4 cut(s) 392, 541, 1612, 1845
MlsI TGGCCA 4 cut(s) 752, 1240, 2149, 2238
MluNI TGGCCA 4 cut(s) 752, 1240, 2149, 2238
MlyI GAGTC 4 cut(s) 1035, 1581, 2357, 2471
MmeI TCCRAC 5 cut(s) 240, 300, 711, 1353, 2563
Mox20I TGGCCA 4 cut(s) 752, 1240, 2149, 2238
Mph1103I ATGCAT 1 cut(s) 1713
MroXI GAANNNNTTC 1 cut(s) 2618
MscI TGGCCA 4 cut(s) 752, 1240, 2149, 2238
MseI TTAA 6 cut(s) 969, 1017, 1206, 1700, 1952, 2013
MslI CAYNNNNRTG 4 cut(s) 342, 489, 1605, 2642
Msp20I TGGCCA 4 cut(s) 752, 1240, 2149, 2238
MspA1I CMGCKG 5 cut(s) 407, 1853, 1940, 2210, 2225
MspI CCGG 4 cut(s) 1186, 1823, 2253, 2345
MspR9I CCNGG 6 cut(s) 754, 1162, 1186, 1558, 1769, 2631
MunI CAATTG 1 cut(s) 1962
Mva1269I GAATGC 1 cut(s) 78
MvaI CCWGG 5 cut(s) 754, 1162, 1558, 1769, 2631
NciI CCSGG 1 cut(s) 1186
NcoI CCATGG 1 cut(s) 2141
NdeI CATATG 1 cut(s) 2602
NlaIV GGNNCC 6 cut(s) 828, 1260, 1429, 1671, 1932, 2598
NmuCI GTSAC 6 cut(s) 355, 960, 1027, 1097, 1520, 2635
NsbI TGCGCA 1 cut(s) 348
NsiI ATGCAT 1 cut(s) 1713
NspI RCATGY 4 cut(s) 554, 1604, 2183, 2296
PaeR7I CTCGAG 1 cut(s) 1773
PagI TCATGA 2 cut(s) 1381, 1612
PaqCI CACCTGC 1 cut(s) 1784
PceI AGGCCT 1 cut(s) 1346
PciI ACATGT 1 cut(s) 2179
PctI GAATGC 1 cut(s) 78
PdmI GAANNNNTTC 1 cut(s) 2618
PfeI GAWTC 5 cut(s) 530, 570, 1007, 1283, 1800
PflMI CCANNNNNTGG 1 cut(s) 1517
Ple19I CGATCG 1 cut(s) 1147
PleI GAGTC 4 cut(s) 1034, 1581, 2356, 2470
PpsI GAGTC 4 cut(s) 1034, 1581, 2356, 2470
PscI ACATGT 1 cut(s) 2179
PshBI ATTAAT 1 cut(s) 969
Psp124BI GAGCTC 2 cut(s) 392, 1845
Psp6I CCWGG 5 cut(s) 752, 1160, 1556, 1767, 2629
PspFI CCCAGC 1 cut(s) 403
PspGI CCWGG 5 cut(s) 752, 1160, 1556, 1767, 2629
PspN4I GGNNCC 6 cut(s) 828, 1260, 1429, 1671, 1932, 2598
PspPI GGNCC 5 cut(s) 756, 916, 1258, 1274, 1428
PstI CTGCAG 1 cut(s) 800
PsuI RGATCY 4 cut(s) 826, 1930, 2305, 2379
PvuI CGATCG 1 cut(s) 1147
PvuII CAGCTG 3 cut(s) 1853, 1940, 2210
RsaI GTAC 4 cut(s) 864, 1666, 1748, 1832
RsaNI GTAC 4 cut(s) 863, 1665, 1747, 1831
RseI CAYNNNNRTG 4 cut(s) 342, 489, 1605, 2642
SacI GAGCTC 2 cut(s) 392, 1845
SaqAI TTAA 6 cut(s) 969, 1017, 1206, 1700, 1952, 2013
Sau96I GGNCC 5 cut(s) 756, 916, 1258, 1274, 1428
ScaI AGTACT 1 cut(s) 1832
SchI GAGTC 4 cut(s) 1035, 1581, 2357, 2471
ScrFI CCNGG 6 cut(s) 754, 1162, 1186, 1558, 1769, 2631
SduI GDGCHC 4 cut(s) 392, 541, 1612, 1845
SfaNI GCATC 6 cut(s) 787, 1552, 1562, 1606, 1720, 1996
SfcI CTRYAG 2 cut(s) 796, 1720
Sfr274I CTCGAG 1 cut(s) 1773
SinI GGWCC 3 cut(s) 1258, 1274, 1428
SlaI CTCGAG 1 cut(s) 1773
SmiMI CAYNNNNRTG 4 cut(s) 342, 489, 1605, 2642
SmlI CTYRAG 3 cut(s) 281, 953, 1773
SmoI CTYRAG 3 cut(s) 281, 953, 1773
SpeI ACTAGT 2 cut(s) 131, 1049
SseBI AGGCCT 1 cut(s) 1346
SsiI CCGC 7 cut(s) 87, 407, 768, 908, 947, 1686, 2225
SspI AATATT 1 cut(s) 650
SspMI CTAG 8 cut(s) 132, 980, 1050, 1082, 1196, 1226, 1446, 2531
SstI GAGCTC 2 cut(s) 392, 1845
StuI AGGCCT 1 cut(s) 1346
StyD4I CCNGG 6 cut(s) 752, 1160, 1184, 1556, 1767, 2629
StyI CCWWGG 3 cut(s) 979, 1076, 2141
TaaI ACNGT 5 cut(s) 169, 187, 520, 1336, 1455
TaiI ACGT 2 cut(s) 686, 2415
TaqI TCGA 5 cut(s) 243, 1143, 1774, 2284, 2420
TatI WGTACW 1 cut(s) 1830
TauI GCSGC 4 cut(s) 89, 771, 911, 1688
TfiI GAWTC 5 cut(s) 530, 570, 1007, 1283, 1800
Tru1I TTAA 6 cut(s) 969, 1017, 1206, 1700, 1952, 2013
Tru9I TTAA 6 cut(s) 969, 1017, 1206, 1700, 1952, 2013
TscAI CASTG 9 cut(s) 126, 183, 192, 259, 859, 1458, 1471, 1573, 1649
TseFI GTSAC 6 cut(s) 355, 960, 1027, 1097, 1520, 2635
Tsp45I GTSAC 6 cut(s) 355, 960, 1027, 1097, 1520, 2635
TspDTI ATGAA 6 cut(s) 129, 140, 522, 888, 1035, 1188
TspGWI ACGGA 5 cut(s) 354, 916, 1057, 1682, 1898
TspRI CASTG 9 cut(s) 126, 183, 192, 259, 859, 1458, 1471, 1573, 1649
Van91I CCANNNNNTGG 1 cut(s) 1517
VpaK11BI GGWCC 3 cut(s) 1258, 1274, 1428
VspI ATTAAT 1 cut(s) 969
XapI RAATTY 5 cut(s) 693, 1154, 1178, 1266, 2518
XceI RCATGY 4 cut(s) 554, 1604, 2183, 2296
XhoI CTCGAG 1 cut(s) 1773
XmaJI CCTAGG 1 cut(s) 979
XmnI GAANNNNTTC 1 cut(s) 2618
XspI CTAG 8 cut(s) 132, 980, 1050, 1082, 1196, 1226, 1446, 2531
ZrmI AGTACT 1 cut(s) 1832
Zsp2I ATGCAT 1 cut(s) 1713
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.