RchiOBHm_Chr5g0056721
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000076
Physical Location & Seq
Forward (+)
60523078 .. 60524256
1179 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33359

Sequence Viewer

Length: 1179 bp
ATGGAGGATCATATGCTTCTGCCTGGCCATAGGTTTTGCCCCATGGAGGATGAACTACTCTTGTACTACCTTAAGCCCAAGGTGAACGGGAAGGAGGTACCTCGAAAAGAATCCCTTATTTGCGAGTTGGATCTTTACGGTGACCAAGAACCATGGAAGATATGGGAAGGATTCGAAGCAAGACGGACAAACGACTTGAGGAAGAACAAAGATCTCTACTTCTTCACCCAAAAGAAGAAGGTCAGTGCAAAGGCCTCGCGTATAAGTCGGAAAGTTGGGAGTGGTACTTGGAAAGGCCAAGTCGCAGCCAAGAACATATATCTTCTTGATGAGAATCAGAAGCCAACAACCACTCTTCTTGGTTTCAAGAAAACCTACACCTATCAGAATAAGCGTTCTGTGCATCATGGTTGCTGGATCATGTATGAGTTCGAATTTCATAAGTCGCAACTCCTGCCCAAGAAACAAGTAAACAAGAATGACTATGTTCTTTGTTTACTTAGGAAAAATGATGAACTGCCGGAAAGGAAGCGAAAAAGGCAACAAGAAGAGGAGATGCTTGAGGAGGACTATGTTGAGGATGGTGATGGAGATAATGATTTGAACTGCGATCCTGCATTGTTGCTGGAGGAGCCGCATGAGAAGTGGCAATGCCTCCTACCTTGCTCCGATAATAATGTCGCAGCACCATCATTGGAGTGGGCTGAACTAGAACAATGGTCCAACCAACAATTCTTGCAGCCAGCACCACCATTAGAAGCTGGACCAACACCACTAGAAGATGAGCCAGCTGTTTCTTTGCAAGTGTATGAGGACTTGGGAGTGCAAAAACCCGTAACTGAACTACAATTAAGGGATGAAAACTTGGGGCAGCAATGTCATGATATACCAACCAATACAGCTACTGAAATGATGAGTGGCCTTGACTTTCACCATGACGAAAATCTAGAGCAGCAAATGGGAGATGAAGTTGGTGTCATGGCACAAGGAGAAGTCGATGTGTATGGTGGGAATTTGAGTGATGTTATCGTTGGCAAAGACTGGGCCAAGTCTTTTATGGAAGACCTAATGAATGATGAGCAGCTAAATACCATGGAAGACTGGGCCAAGTCTTTTATGGAGGACCTAATGAATGATGAGCAGCTAAATACCATGGAAGTGGGCAACTGCATAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

392

Amino Acids

45.46

Weight (kDa)

4.69

Isoelectric Point (pI)

40.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 8 - 145 1e-24 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 97
AccB1I GGYRCC 1 cut(s) 97
AccII CGCG 1 cut(s) 259
AciI CCGC 1 cut(s) 635
AclWI GGATC 4 cut(s) 15, 138, 425, 605
AcoI YGGCCR 1 cut(s) 25
AcsI RAATTY 2 cut(s) 434, 1012
AfaI GTAC 3 cut(s) 65, 99, 286
AfiI CCNNNNNNNGG 1 cut(s) 46
AflII CTTAAG 1 cut(s) 71
AgsI TTSAA 2 cut(s) 367, 604
AjnI CCWGG 1 cut(s) 22
AjuI GAANNNNNNNTTGG 2 cut(s) 716, 748
AluBI AGCT 5 cut(s) 761, 791, 902, 1084, 1144
AluI AGCT 5 cut(s) 761, 791, 902, 1084, 1144
AlwI GGATC 4 cut(s) 15, 138, 425, 605
AlwNI CAGNNNCTG 1 cut(s) 905
AoxI GGCC 6 cut(s) 25, 252, 295, 919, 1044, 1104
ApeKI GCWGC 7 cut(s) 305, 683, 739, 871, 952, 1081, 1141
ApoI RAATTY 2 cut(s) 434, 1012
Asp718I GGTACC 1 cut(s) 97
AspS9I GGNCC 5 cut(s) 720, 764, 1044, 1104, 1123
AsuHPI GGTGA 5 cut(s) 94, 152, 217, 596, 923
AsuII TTCGAA 2 cut(s) 174, 432
AvaII GGWCC 3 cut(s) 720, 764, 1123
BalI TGGCCA 1 cut(s) 27
BanI GGYRCC 1 cut(s) 97
BbsI GAAGAC 2 cut(s) 1068, 1104
BbvI GCAGC 7 cut(s) 317, 695, 751, 883, 964, 1093, 1153
BccI CCATC 3 cut(s) 575, 581, 697
BcgI CGANNNNNNTGC 2 cut(s) 237, 271
BciT130I CCWGG 1 cut(s) 24
BfaI CTAG 3 cut(s) 710, 776, 947
BfrI CTTAAG 1 cut(s) 71
BglII AGATCT 1 cut(s) 211
BisI GCNGC 8 cut(s) 306, 635, 684, 740, 872, 953, 1082, 1142
BlsI GCNGC 8 cut(s) 307, 636, 685, 741, 873, 954, 1083, 1143
Bme1390I CCNGG 1 cut(s) 24
Bme18I GGWCC 3 cut(s) 720, 764, 1123
BmgT120I GGNCC 5 cut(s) 720, 764, 1044, 1104, 1123
BmiI GGNNCC 2 cut(s) 99, 633
BmrFI CCNGG 1 cut(s) 24
BmrI ACTGGG 2 cut(s) 1051, 1111
BmsI GCATC 2 cut(s) 412, 546
BmuI ACTGGG 2 cut(s) 1051, 1111
BpiI GAAGAC 2 cut(s) 1068, 1104
BpmI CTGGAG 1 cut(s) 647
Bpu14I TTCGAA 2 cut(s) 174, 432
BpuEI CTTGAG 2 cut(s) 217, 581
BsaBI GATNNNNATC 1 cut(s) 333
BsaJI CCNNGG 5 cut(s) 42, 78, 152, 1092, 1152
BsaXI ACNNNNNCTCC 2 cut(s) 954, 984
Bsc4I CCNNNNNNNGG 1 cut(s) 46
Bse1I ACTGG 2 cut(s) 1046, 1106
Bse3DI GCAATG 2 cut(s) 656, 881
Bse8I GATNNNNATC 1 cut(s) 333
BseBI CCWGG 1 cut(s) 24
BseDI CCNNGG 5 cut(s) 42, 78, 152, 1092, 1152
BseGI GGATG 3 cut(s) 55, 586, 862
BseJI GATNNNNATC 1 cut(s) 333
BseLI CCNNNNNNNGG 1 cut(s) 46
BseMI GCAATG 2 cut(s) 656, 881
BseNI ACTGG 2 cut(s) 1046, 1106
BseRI GAGGAG 3 cut(s) 566, 578, 644
BseXI GCAGC 7 cut(s) 317, 695, 751, 883, 964, 1093, 1153
Bsh1236I CGCG 1 cut(s) 259
BshFI GGCC 6 cut(s) 27, 254, 297, 921, 1046, 1106
BshNI GGYRCC 1 cut(s) 97
BsiSI CCGG 1 cut(s) 521
BslI CCNNNNNNNGG 1 cut(s) 46
BsnI GGCC 6 cut(s) 27, 254, 297, 921, 1046, 1106
Bsp119I TTCGAA 2 cut(s) 174, 432
Bsp143I GATC 5 cut(s) 7, 130, 211, 417, 610
Bsp19I CCATGG 4 cut(s) 42, 152, 1092, 1152
BspACI CCGC 1 cut(s) 635
BspANI GGCC 6 cut(s) 27, 254, 297, 921, 1046, 1106
BspFNI CGCG 1 cut(s) 259
BspHI TCATGA 1 cut(s) 880
BspLI GGNNCC 2 cut(s) 99, 633
BspPI GGATC 4 cut(s) 15, 138, 425, 605
BspT104I TTCGAA 2 cut(s) 174, 432
BspT107I GGYRCC 1 cut(s) 97
BspTI CTTAAG 1 cut(s) 71
BsrDI GCAATG 2 cut(s) 656, 881
BsrI ACTGG 2 cut(s) 1046, 1106
BssECI CCNNGG 5 cut(s) 42, 78, 152, 1092, 1152
BssMI GATC 5 cut(s) 7, 130, 211, 417, 610
BssT1I CCWWGG 5 cut(s) 42, 78, 152, 1092, 1152
Bst2UI CCWGG 1 cut(s) 24
Bst4CI ACNGT 1 cut(s) 140
Bst6I CTCTTC 2 cut(s) 360, 543
BstAFI CTTAAG 1 cut(s) 71
BstAPI GCANNNNNTGC 1 cut(s) 454
BstBI TTCGAA 2 cut(s) 174, 432
BstC8I GCNNGC 2 cut(s) 744, 789
BstDEI CTNAG 1 cut(s) 500
BstDSI CCRYGG 4 cut(s) 42, 152, 1092, 1152
BstEII GGTNACC 1 cut(s) 140
BstF5I GGATG 3 cut(s) 55, 586, 862
BstFNI CGCG 1 cut(s) 259
BstKTI GATC 5 cut(s) 10, 133, 214, 420, 613
BstMBI GATC 5 cut(s) 7, 130, 211, 417, 610
BstMWI GCNNNNNNNGC 4 cut(s) 400, 454, 538, 631
BstNI CCWGG 1 cut(s) 24
BstPI GGTNACC 1 cut(s) 140
BstSCI CCNGG 1 cut(s) 22
BstUI CGCG 1 cut(s) 259
BstV1I GCAGC 7 cut(s) 317, 695, 751, 883, 964, 1093, 1153
BstV2I GAAGAC 2 cut(s) 1068, 1104
BstX2I RGATCY 2 cut(s) 130, 211
BstXI CCANNNNNNTGG 1 cut(s) 1159
BstYI RGATCY 2 cut(s) 130, 211
BsuRI GGCC 6 cut(s) 27, 254, 297, 921, 1046, 1106
BtgI CCRYGG 4 cut(s) 42, 152, 1092, 1152
BtsCI GGATG 3 cut(s) 55, 586, 862
BtsIMutI CAGTG 1 cut(s) 250
Cac8I GCNNGC 2 cut(s) 744, 789
CaiI CAGNNNCTG 1 cut(s) 905
CciI TCATGA 1 cut(s) 880
Cfr13I GGNCC 5 cut(s) 720, 764, 1044, 1104, 1123
Csp6I GTAC 3 cut(s) 64, 98, 285
CspCI CAANNNNNGTGG 2 cut(s) 340, 375
CviQI GTAC 3 cut(s) 64, 98, 285
DdeI CTNAG 1 cut(s) 500
DpnI GATC 5 cut(s) 9, 132, 213, 419, 612
DpnII GATC 5 cut(s) 7, 130, 211, 417, 610
EaeI YGGCCR 1 cut(s) 25
Eam1104I CTCTTC 2 cut(s) 360, 543
EarI CTCTTC 2 cut(s) 360, 543
Eco130I CCWWGG 5 cut(s) 42, 78, 152, 1092, 1152
Eco147I AGGCCT 1 cut(s) 254
Eco47I GGWCC 3 cut(s) 720, 764, 1123
Eco91I GGTNACC 1 cut(s) 140
EcoO109I RGGNCCY 1 cut(s) 1123
EcoO65I GGTNACC 1 cut(s) 140
EcoRII CCWGG 1 cut(s) 22
EcoT14I CCWWGG 5 cut(s) 42, 78, 152, 1092, 1152
ErhI CCWWGG 5 cut(s) 42, 78, 152, 1092, 1152
FalI AAGNNNNNCTT 2 cut(s) 99, 131
FauNDI CATATG 1 cut(s) 12
Fnu4HI GCNGC 8 cut(s) 306, 635, 684, 740, 872, 953, 1082, 1142
FokI GGATG 3 cut(s) 62, 593, 869
Fsp4HI GCNGC 8 cut(s) 306, 635, 684, 740, 872, 953, 1082, 1142
FspBI CTAG 3 cut(s) 710, 776, 947
GluI GCNGC 8 cut(s) 306, 635, 684, 740, 872, 953, 1082, 1142
GsuI CTGGAG 1 cut(s) 647
HaeIII GGCC 6 cut(s) 27, 254, 297, 921, 1046, 1106
HapII CCGG 1 cut(s) 521
HinfI GANTC 3 cut(s) 110, 171, 334
HpaII CCGG 1 cut(s) 521
HphI GGTGA 5 cut(s) 94, 152, 217, 596, 923
Hpy166II GTNNAC 3 cut(s) 85, 472, 497
Hpy188I TCNGA 4 cut(s) 270, 339, 387, 670
Hpy188III TCNNGA 4 cut(s) 326, 367, 881, 947
Hpy8I GTNNAC 3 cut(s) 85, 472, 497
HpyAV CCTTC 3 cut(s) 85, 161, 232
HpyCH4III ACNGT 1 cut(s) 140
HpyCH4V TGCA 7 cut(s) 248, 403, 617, 739, 802, 826, 1170
HpyF10VI GCNNNNNNNGC 4 cut(s) 400, 454, 538, 631
HpyF3I CTNAG 1 cut(s) 500
KpnI GGTACC 1 cut(s) 101
Kzo9I GATC 5 cut(s) 7, 130, 211, 417, 610
LmnI GCTCC 2 cut(s) 631, 671
Lsp1109I GCAGC 7 cut(s) 317, 695, 751, 883, 964, 1093, 1153
LweI GCATC 2 cut(s) 412, 546
MaeI CTAG 3 cut(s) 710, 776, 947
MaeIII GTNAC 2 cut(s) 140, 835
MalI GATC 5 cut(s) 9, 132, 213, 419, 612
MboI GATC 5 cut(s) 7, 130, 211, 417, 610
MflI RGATCY 2 cut(s) 130, 211
MlsI TGGCCA 1 cut(s) 27
MluCI AATT 4 cut(s) 434, 731, 848, 1012
MluNI TGGCCA 1 cut(s) 27
MmeI TCCRAC 3 cut(s) 108, 248, 747
Mox20I TGGCCA 1 cut(s) 27
MscI TGGCCA 1 cut(s) 27
MseI TTAA 2 cut(s) 72, 851
MslI CAYNNNNRTG 2 cut(s) 697, 1157
Msp20I TGGCCA 1 cut(s) 27
MspA1I CMGCKG 1 cut(s) 791
MspCI CTTAAG 1 cut(s) 71
MspI CCGG 1 cut(s) 521
MspR9I CCNGG 1 cut(s) 24
MvaI CCWGG 1 cut(s) 24
MvnI CGCG 1 cut(s) 259
MwoI GCNNNNNNNGC 4 cut(s) 400, 454, 538, 631
NcoI CCATGG 4 cut(s) 42, 152, 1092, 1152
NdeI CATATG 1 cut(s) 12
NdeII GATC 5 cut(s) 7, 130, 211, 417, 610
NlaIV GGNNCC 2 cut(s) 99, 633
NmuCI GTSAC 1 cut(s) 140
NspV TTCGAA 2 cut(s) 174, 432
PagI TCATGA 1 cut(s) 880
PceI AGGCCT 1 cut(s) 254
PfeI GAWTC 3 cut(s) 110, 171, 334
PkrI GCNGC 8 cut(s) 307, 636, 685, 741, 873, 954, 1083, 1143
PpuMI RGGWCCY 1 cut(s) 1123
Psp5II RGGWCCY 1 cut(s) 1123
Psp6I CCWGG 1 cut(s) 22
PspEI GGTNACC 1 cut(s) 140
PspGI CCWGG 1 cut(s) 22
PspN4I GGNNCC 2 cut(s) 99, 633
PspPI GGNCC 5 cut(s) 720, 764, 1044, 1104, 1123
PspPPI RGGWCCY 1 cut(s) 1123
PstNI CAGNNNCTG 1 cut(s) 905
PsuI RGATCY 2 cut(s) 130, 211
PvuII CAGCTG 1 cut(s) 791
RsaI GTAC 3 cut(s) 65, 99, 286
RsaNI GTAC 3 cut(s) 64, 98, 285
RseI CAYNNNNRTG 2 cut(s) 697, 1157
SaqAI TTAA 2 cut(s) 72, 851
SatI GCNGC 8 cut(s) 306, 635, 684, 740, 872, 953, 1082, 1142
Sau3AI GATC 5 cut(s) 7, 130, 211, 417, 610
Sau96I GGNCC 5 cut(s) 720, 764, 1044, 1104, 1123
ScrFI CCNGG 1 cut(s) 24
SfaNI GCATC 2 cut(s) 412, 546
SfuI TTCGAA 2 cut(s) 174, 432
SinI GGWCC 3 cut(s) 720, 764, 1123
SmiMI CAYNNNNRTG 2 cut(s) 697, 1157
SmlI CTYRAG 3 cut(s) 71, 196, 560
SmoI CTYRAG 3 cut(s) 71, 196, 560
Sse9I AATT 4 cut(s) 434, 731, 848, 1012
SseBI AGGCCT 1 cut(s) 254
SsiI CCGC 1 cut(s) 635
SspMI CTAG 3 cut(s) 710, 776, 947
StuI AGGCCT 1 cut(s) 254
StyD4I CCNGG 1 cut(s) 22
StyI CCWWGG 5 cut(s) 42, 78, 152, 1092, 1152
TaaI ACNGT 1 cut(s) 140
TaqI TCGA 4 cut(s) 103, 174, 432, 996
TasI AATT 4 cut(s) 434, 731, 848, 1012
TatI WGTACW 1 cut(s) 63
TauI GCSGC 1 cut(s) 637
TfiI GAWTC 3 cut(s) 110, 171, 334
Tru1I TTAA 2 cut(s) 72, 851
Tru9I TTAA 2 cut(s) 72, 851
TscAI CASTG 1 cut(s) 250
TseFI GTSAC 1 cut(s) 140
TseI GCWGC 7 cut(s) 305, 683, 739, 871, 952, 1081, 1141
Tsp45I GTSAC 1 cut(s) 140
TspDTI ATGAA 7 cut(s) 66, 428, 528, 873, 981, 1085, 1145
TspGWI ACGGA 1 cut(s) 199
TspRI CASTG 1 cut(s) 250
Vha464I CTTAAG 1 cut(s) 71
VpaK11BI GGWCC 3 cut(s) 720, 764, 1123
XapI RAATTY 2 cut(s) 434, 1012
XbaI TCTAGA 1 cut(s) 946
XcmI CCANNNNNNNNNTGG 4 cut(s) 159, 696, 1054, 1114
XspI CTAG 3 cut(s) 710, 776, 947
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.