Prupe.3G111400_v2.0.a1

No apical meristem (NAM) protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000076
Physical Location & Seq
Reverse (-)
9281361 .. 9282710
1350 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G111400.1

Sequence Viewer

Length: 1350 bp
ATGGCGCCTAATAATATTCCTATGGGTTTCAAGTTTCGTCCAAGTGATGAAGAATTGTTGGGATATTATCTTCTTAACAAGGTTCGTGGCTCATCGTTTAAGTATGAAAATGTTATTCCGGAATTTGATCTTTACGGTCGAATAGAGCCGTGGGATGTATGGAACCAATTTGGCGGAAACAAATTAGAAGATGGTGACGACCTTTATTTCTTCACCAAATTGAAGAGCTCGAGTGCCAAGAATACCCGCATGGCTCGCACCATAGGATCTGGGTCATGGAAAGCTGAGAATTCTGGAAAAAAGGTCCCTGATCCAAAGGATAAGAAGAACGATTTAGGTATGTGGAAAAGGTTACATTATGAAAACCCTAAATCGGATCAAAACGGTTGCTGGATCATGCACGAGTACAGCCTTCGCCCTTCGTTGGTGAAGCCCAAACCAAACTCAACTCATCGGTTTGTGGTCTGCCGGATTCGAAAGAACCACATGAGGAAGAGAAAGTTTACGTCGACAGCTGCAAAAGAAACTCATGGCATTCCATCTCTACAATCTCAAAATAAGAAGCAGAGGCAACAAGAGACTAGCTTTGACGAATATTTAATTGGAAACTCCACTCCCATGTCTCAGGCTATCGGAGGAGGGCCCACTGAGACTCAATCTCCGCAAGACTGCCCTTTTTTTGCATACCCAATAACCATGGTTGATGATGCCATCCAATTTCATGGTGATGTTCTAATGGGAGGTTTCTCACCTTTGGTGGACAGCGCACAATCATTCACGGAACAAGCAGACTTCGGATCATATAACCAAGAGAGGACAGAATGTATTATTGAATTTGATGAGACTCATGCTACTCAACAAGGCCTCACTGACAACAATATTGGAGCTGCGGCAACAGAAGAAACAGACTGTCAATTTGGTAGTGAAAACAGCCAGCCCGATAATGTCGACTTCTCGATTGATTATGGTTGGCTCCACCACTTGATCCAGGTTGATGATGATGATGTTACTACAGCCACACCATCGGGATCACAAAGCATCCACCAGTCTGCAGTTAATGATGAAGAGAGGCCAGCATATGATCCATCCTCCCAATCACTCACCACTGAGTCTGCACTTGAATTTGGGATGTCATCAGAAAATCAAACTGGTGCTCAACTTGGAGTTGGTACTGAAAGTGCTCAAGTCAATGCGTCAGAGTTCCAGGTTCACAATGAAGATATGCTCGATTTCCTGAACACTGCTACTTTTGATCAACTGGTGGACTTGTTCCAGTTTCCTGATGATGATGATGATGATGAAGTGCAAGCTTTCACCACAGAGTCATCGGTTATGGGAATAATGGGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

450

Amino Acids

50.33

Weight (kDa)

4.6

Isoelectric Point (pI)

49.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 4
AccI GTMKAC 2 cut(s) 509, 948
AccIII TCCGGA 1 cut(s) 118
AciI CCGC 4 cut(s) 174, 247, 662, 890
AclWI GGATC 8 cut(s) 274, 305, 384, 401, 805, 979, 1036, 1076
AcsI RAATTY 4 cut(s) 122, 289, 833, 1121
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 2 cut(s) 407, 1171
AfiI CCNNNNNNNGG 2 cut(s) 373, 424
AgsI TTSAA 4 cut(s) 31, 223, 833, 1121
AjnI CCWGG 2 cut(s) 987, 1203
AjuI GAANNNNNNNTTGG 2 cut(s) 585, 617
AluBI AGCT 6 cut(s) 228, 284, 515, 585, 887, 1310
AluI AGCT 6 cut(s) 228, 284, 515, 585, 887, 1310
Alw21I GWGCWC 3 cut(s) 230, 1156, 1183
Alw26I GTCTC 4 cut(s) 572, 627, 644, 836
AlwI GGATC 8 cut(s) 274, 305, 384, 401, 805, 979, 1036, 1076
Ama87I CYCGRG 1 cut(s) 229
Aor13HI TCCGGA 1 cut(s) 118
AoxI GGCC 3 cut(s) 641, 862, 1070
ApaI GGGCCC 1 cut(s) 645
ApeKI GCWGC 2 cut(s) 515, 887
ApoI RAATTY 4 cut(s) 122, 289, 833, 1121
ArsI GACNNNNNNTTYG 2 cut(s) 899, 931
AspLEI GCGC 2 cut(s) 7, 767
AspS9I GGNCC 3 cut(s) 304, 641, 642
AsuHPI GGTGA 7 cut(s) 205, 206, 439, 737, 741, 1093, 1306
AsuII TTCGAA 1 cut(s) 475
AvaI CYCGRG 1 cut(s) 229
AvaII GGWCC 1 cut(s) 304
BaeGI GKGCMC 1 cut(s) 645
BanI GGYRCC 1 cut(s) 4
BanII GRGCYC 2 cut(s) 230, 645
BauI CACGAG 1 cut(s) 401
Bbv12I GWGCWC 3 cut(s) 230, 1156, 1183
BbvI GCAGC 2 cut(s) 502, 874
BccI CCATC 5 cut(s) 185, 547, 719, 1030, 1093
BceAI ACGGC 1 cut(s) 133
BciT130I CCWGG 2 cut(s) 989, 1205
BclI TGATCA 1 cut(s) 1252
BcoDI GTCTC 4 cut(s) 572, 627, 644, 836
BfaI CTAG 1 cut(s) 582
BfmI CTRYAG 2 cut(s) 1011, 1050
BfoI RGCGCY 1 cut(s) 8
BisI GCNGC 3 cut(s) 516, 888, 891
BlsI GCNGC 3 cut(s) 517, 889, 892
Bme1390I CCNGG 2 cut(s) 989, 1205
Bme18I GGWCC 1 cut(s) 304
BmeT110I CYCGRG 1 cut(s) 229
BmgT120I GGNCC 3 cut(s) 304, 641, 642
BmiI GGNNCC 5 cut(s) 6, 164, 306, 643, 974
BmrFI CCNGG 2 cut(s) 989, 1205
BmsI GCATC 2 cut(s) 697, 1047
Bpu14I TTCGAA 1 cut(s) 475
BpuEI CTTGAG 1 cut(s) 1167
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 2 cut(s) 149, 696
BsaWI WCCGGW 1 cut(s) 118
BsaXI ACNNNNNCTCC 2 cut(s) 643, 673
Bsc4I CCNNNNNNNGG 2 cut(s) 373, 424
Bse1I ACTGG 4 cut(s) 1045, 1153, 1263, 1273
BseAI TCCGGA 1 cut(s) 118
BseBI CCWGG 2 cut(s) 989, 1205
BseDI CCNNGG 2 cut(s) 149, 696
BseGI GGATG 5 cut(s) 160, 711, 1038, 1085, 1134
BseLI CCNNNNNNNGG 2 cut(s) 373, 424
BseMII CTCAG 4 cut(s) 276, 638, 639, 1098
BseNI ACTGG 4 cut(s) 1045, 1153, 1263, 1273
BseRI GAGGAG 1 cut(s) 651
BseSI GKGCMC 1 cut(s) 645
BseXI GCAGC 2 cut(s) 502, 874
BsgI GTGCAG 1 cut(s) 1098
Bsh1285I CGRYCG 1 cut(s) 139
BshFI GGCC 3 cut(s) 643, 864, 1072
BshNI GGYRCC 1 cut(s) 4
BsiEI CGRYCG 1 cut(s) 139
BsiHKAI GWGCWC 3 cut(s) 230, 1156, 1183
BsiHKCI CYCGRG 1 cut(s) 229
BsiSI CCGG 2 cut(s) 119, 469
BslFI GGGAC 1 cut(s) 290
BslI CCNNNNNNNGG 2 cut(s) 373, 424
BsmAI GTCTC 4 cut(s) 572, 627, 644, 836
BsmFI GGGAC 1 cut(s) 290
BsmI GAATGC 1 cut(s) 534
BsnI GGCC 3 cut(s) 643, 864, 1072
BsoBI CYCGRG 1 cut(s) 229
Bsp119I TTCGAA 1 cut(s) 475
Bsp120I GGGCCC 1 cut(s) 641
Bsp1286I GDGCHC 4 cut(s) 230, 645, 1156, 1183
Bsp13I TCCGGA 1 cut(s) 118
Bsp19I CCATGG 1 cut(s) 696
BspACI CCGC 4 cut(s) 174, 247, 662, 890
BspANI GGCC 3 cut(s) 643, 864, 1072
BspCNI CTCAG 4 cut(s) 277, 637, 640, 1099
BspEI TCCGGA 1 cut(s) 118
BspLI GGNNCC 5 cut(s) 6, 164, 306, 643, 974
BspMAI CTGCAG 1 cut(s) 1054
BspPI GGATC 8 cut(s) 274, 305, 384, 401, 805, 979, 1036, 1076
BspQI GCTCTTC 1 cut(s) 218
BspT104I TTCGAA 1 cut(s) 475
BspT107I GGYRCC 1 cut(s) 4
BsrI ACTGG 4 cut(s) 1045, 1153, 1263, 1273
BssECI CCNNGG 2 cut(s) 149, 696
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 401
BssT1I CCWWGG 1 cut(s) 696
Bst2BI CACGAG 1 cut(s) 401
Bst2UI CCWGG 2 cut(s) 989, 1205
Bst4CI ACNGT 3 cut(s) 137, 386, 911
Bst6I CTCTTC 3 cut(s) 218, 488, 1059
BstACI GRCGYC 1 cut(s) 5
BstBI TTCGAA 1 cut(s) 475
BstC8I GCNNGC 4 cut(s) 256, 935, 1074, 1308
BstDEI CTNAG 4 cut(s) 285, 624, 648, 1107
BstDSI CCRYGG 2 cut(s) 149, 696
BstF5I GGATG 5 cut(s) 160, 711, 1038, 1085, 1134
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 2 cut(s) 7, 767
BstMAI GTCTC 4 cut(s) 572, 627, 644, 836
BstMCI CGRYCG 1 cut(s) 139
BstMWI GCNNNNNNNGC 1 cut(s) 255
BstNI CCWGG 2 cut(s) 989, 1205
BstSCI CCNGG 2 cut(s) 987, 1203
BstSFI CTRYAG 2 cut(s) 1011, 1050
BstSLI GKGCMC 1 cut(s) 645
BstV1I GCAGC 2 cut(s) 502, 874
BstX2I RGATCY 1 cut(s) 266
BstXI CCANNNNNNTGG 1 cut(s) 722
BstYI RGATCY 1 cut(s) 266
BsuRI GGCC 3 cut(s) 643, 864, 1072
BtgI CCRYGG 2 cut(s) 149, 696
BtsCI GGATG 5 cut(s) 160, 711, 1038, 1085, 1134
BtsI GCAGTG 1 cut(s) 1239
BtsIMutI CAGTG 4 cut(s) 645, 867, 1104, 1239
Cac8I GCNNGC 4 cut(s) 256, 935, 1074, 1308
CfoI GCGC 2 cut(s) 7, 767
Cfr13I GGNCC 3 cut(s) 304, 641, 642
CseI GACGC 1 cut(s) 1182
Csp6I GTAC 2 cut(s) 406, 1170
CspCI CAANNNNNGTGG 2 cut(s) 67, 102
CviAII CATG 9 cut(s) 250, 276, 397, 487, 530, 619, 697, 722, 848
CviQI GTAC 2 cut(s) 406, 1170
DdeI CTNAG 4 cut(s) 285, 624, 648, 1107
DinI GGCGCC 1 cut(s) 6
Eam1104I CTCTTC 3 cut(s) 218, 488, 1059
EarI CTCTTC 3 cut(s) 218, 488, 1059
EciI GGCGGA 1 cut(s) 189
Ecl136II GAGCTC 1 cut(s) 228
Eco130I CCWWGG 1 cut(s) 696
Eco147I AGGCCT 1 cut(s) 864
Eco24I GRGCYC 2 cut(s) 230, 645
Eco47I GGWCC 1 cut(s) 304
Eco53kI GAGCTC 1 cut(s) 228
Eco88I CYCGRG 1 cut(s) 229
EcoICRI GAGCTC 1 cut(s) 228
EcoO109I RGGNCCY 2 cut(s) 304, 641
EcoRI GAATTC 1 cut(s) 289
EcoRII CCWGG 2 cut(s) 987, 1203
EcoT14I CCWWGG 1 cut(s) 696
EcoT38I GRGCYC 2 cut(s) 230, 645
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 696
FaeI CATG 9 cut(s) 253, 279, 400, 490, 533, 622, 700, 725, 851
FaqI GGGAC 1 cut(s) 290
FatI CATG 9 cut(s) 249, 275, 396, 486, 529, 618, 696, 721, 847
FauI CCCGC 1 cut(s) 254
FauNDI CATATG 1 cut(s) 1078
FbaI TGATCA 1 cut(s) 1252
FblI GTMKAC 2 cut(s) 509, 948
Fnu4HI GCNGC 3 cut(s) 516, 888, 891
FokI GGATG 5 cut(s) 167, 698, 1025, 1072, 1141
FriOI GRGCYC 2 cut(s) 230, 645
Fsp4HI GCNGC 3 cut(s) 516, 888, 891
FspBI CTAG 1 cut(s) 582
GlaI GCGC 2 cut(s) 6, 766
GluI GCNGC 3 cut(s) 516, 888, 891
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 3 cut(s) 643, 864, 1072
HapII CCGG 2 cut(s) 119, 469
HgaI GACGC 1 cut(s) 1182
HhaI GCGC 2 cut(s) 7, 767
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 9 cut(s) 253, 279, 400, 490, 533, 622, 700, 725, 851
Hin6I GCGC 2 cut(s) 5, 765
HinP1I GCGC 2 cut(s) 5, 765
HincII GTYRAC 2 cut(s) 510, 949
HindII GTYRAC 2 cut(s) 510, 949
HindIII AAGCTT 1 cut(s) 1308
HinfI GANTC 5 cut(s) 472, 652, 844, 1109, 1322
HpaII CCGG 2 cut(s) 119, 469
HphI GGTGA 7 cut(s) 205, 206, 439, 737, 741, 1093, 1306
Hpy166II GTNNAC 6 cut(s) 504, 510, 760, 949, 1210, 1264
Hpy188I TCNGA 5 cut(s) 376, 635, 797, 1138, 1198
Hpy188III TCNNGA 6 cut(s) 119, 294, 955, 1026, 1234, 1280
Hpy8I GTNNAC 6 cut(s) 504, 510, 760, 949, 1210, 1264
Hpy99I CGWCG 1 cut(s) 511
HpyAV CCTTC 2 cut(s) 422, 429
HpyCH4III ACNGT 3 cut(s) 137, 386, 911
HpyCH4IV ACGT 1 cut(s) 506
HpyCH4V TGCA 6 cut(s) 400, 518, 683, 1052, 1115, 1306
HpyF10VI GCNNNNNNNGC 1 cut(s) 255
HpyF3I CTNAG 4 cut(s) 285, 624, 648, 1107
HpySE526I ACGT 1 cut(s) 506
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 9 cut(s) 253, 279, 400, 490, 533, 622, 700, 725, 851
HspAI GCGC 2 cut(s) 5, 765
KasI GGCGCC 1 cut(s) 4
Kpn2I TCCGGA 1 cut(s) 118
Ksp22I TGATCA 1 cut(s) 1252
LguI GCTCTTC 1 cut(s) 218
LmnI GCTCC 2 cut(s) 884, 978
Lsp1109I GCAGC 2 cut(s) 502, 874
LweI GCATC 2 cut(s) 697, 1047
MaeI CTAG 1 cut(s) 582
MaeII ACGT 1 cut(s) 506
MaeIII GTNAC 3 cut(s) 194, 351, 1006
MflI RGATCY 1 cut(s) 266
MhlI GDGCHC 4 cut(s) 230, 645, 1156, 1183
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 4 cut(s) 646, 838, 1118, 1331
MnlI CCTC 9 cut(s) 483, 561, 629, 632, 734, 807, 875, 1062, 1099
MroI TCCGGA 1 cut(s) 118
MseI TTAA 4 cut(s) 75, 99, 599, 1056
MslI CAYNNNNRTG 2 cut(s) 617, 726
MspA1I CMGCKG 1 cut(s) 515
MspI CCGG 2 cut(s) 119, 469
MspR9I CCNGG 2 cut(s) 989, 1205
Mva1269I GAATGC 1 cut(s) 534
MvaI CCWGG 2 cut(s) 989, 1205
MwoI GCNNNNNNNGC 1 cut(s) 255
NarI GGCGCC 1 cut(s) 5
NcoI CCATGG 1 cut(s) 696
NdeI CATATG 1 cut(s) 1078
NlaIII CATG 9 cut(s) 253, 279, 400, 490, 533, 622, 700, 725, 851
NlaIV GGNNCC 5 cut(s) 6, 164, 306, 643, 974
NmuCI GTSAC 1 cut(s) 194
NspV TTCGAA 1 cut(s) 475
PaeR7I CTCGAG 1 cut(s) 229
PceI AGGCCT 1 cut(s) 864
PciSI GCTCTTC 1 cut(s) 218
PctI GAATGC 1 cut(s) 534
PfeI GAWTC 1 cut(s) 472
PkrI GCNGC 3 cut(s) 517, 889, 892
PleI GAGTC 4 cut(s) 646, 838, 1117, 1330
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 4 cut(s) 646, 838, 1117, 1330
PpuMI RGGWCCY 1 cut(s) 304
Psp124BI GAGCTC 1 cut(s) 230
Psp5II RGGWCCY 1 cut(s) 304
Psp6I CCWGG 2 cut(s) 987, 1203
PspGI CCWGG 2 cut(s) 987, 1203
PspN4I GGNNCC 5 cut(s) 6, 164, 306, 643, 974
PspOMI GGGCCC 1 cut(s) 641
PspPI GGNCC 3 cut(s) 304, 641, 642
PspPPI RGGWCCY 1 cut(s) 304
PspXI VCTCGAGB 1 cut(s) 229
PstI CTGCAG 1 cut(s) 1054
PsuI RGATCY 1 cut(s) 266
PvuII CAGCTG 1 cut(s) 515
RsaI GTAC 2 cut(s) 407, 1171
RsaNI GTAC 2 cut(s) 406, 1170
RseI CAYNNNNRTG 2 cut(s) 617, 726
SacI GAGCTC 1 cut(s) 230
SalI GTCGAC 2 cut(s) 508, 947
SapI GCTCTTC 1 cut(s) 218
SaqAI TTAA 4 cut(s) 75, 99, 599, 1056
SatI GCNGC 3 cut(s) 516, 888, 891
Sau96I GGNCC 3 cut(s) 304, 641, 642
SchI GAGTC 4 cut(s) 646, 838, 1118, 1331
ScrFI CCNGG 2 cut(s) 989, 1205
SduI GDGCHC 4 cut(s) 230, 645, 1156, 1183
SfaNI GCATC 2 cut(s) 697, 1047
SfcI CTRYAG 2 cut(s) 1011, 1050
SfoI GGCGCC 1 cut(s) 6
Sfr274I CTCGAG 1 cut(s) 229
SfuI TTCGAA 1 cut(s) 475
SinI GGWCC 1 cut(s) 304
SlaI CTCGAG 1 cut(s) 229
SmiMI CAYNNNNRTG 2 cut(s) 617, 726
SmlI CTYRAG 2 cut(s) 229, 1182
SmoI CTYRAG 2 cut(s) 229, 1182
SseBI AGGCCT 1 cut(s) 864
SsiI CCGC 4 cut(s) 174, 247, 662, 890
SspDI GGCGCC 1 cut(s) 4
SspI AATATT 3 cut(s) 16, 596, 880
SspMI CTAG 1 cut(s) 582
SstI GAGCTC 1 cut(s) 230
StuI AGGCCT 1 cut(s) 864
StyD4I CCNGG 2 cut(s) 987, 1203
StyI CCWWGG 1 cut(s) 696
TaaI ACNGT 3 cut(s) 137, 386, 911
TaiI ACGT 1 cut(s) 509
TaqI TCGA 7 cut(s) 139, 230, 475, 509, 948, 956, 1227
TatI WGTACW 1 cut(s) 405
TauI GCSGC 1 cut(s) 893
TfiI GAWTC 1 cut(s) 472
Tru1I TTAA 4 cut(s) 75, 99, 599, 1056
Tru9I TTAA 4 cut(s) 75, 99, 599, 1056
TscAI CASTG 4 cut(s) 652, 874, 1111, 1246
TseFI GTSAC 1 cut(s) 194
TseI GCWGC 2 cut(s) 515, 887
Tsp45I GTSAC 1 cut(s) 194
TspDTI ATGAA 7 cut(s) 63, 120, 375, 710, 1077, 1230, 1314
TspGWI ACGGA 1 cut(s) 794
TspRI CASTG 4 cut(s) 652, 874, 1111, 1246
VpaK11BI GGWCC 1 cut(s) 304
XapI RAATTY 4 cut(s) 122, 289, 833, 1121
XhoI CTCGAG 1 cut(s) 229
XmiI GTMKAC 2 cut(s) 509, 948
XspI CTAG 1 cut(s) 582
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.