NAC domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NAM | PF02365 | 9 - 148 | 3e-25 | No apical meristem (NAM) protein |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 838 |
| AciI | CCGC | 4 cut(s) | 288, 629, 717, 884 |
| AclWI | GGATC | 4 cut(s) | 141, 146, 431, 599 |
| AcsI | RAATTY | 2 cut(s) | 815, 874 |
| AcuI | CTGAAG | 1 cut(s) | 1044 |
| AfaI | GTAC | 4 cut(s) | 292, 522, 714, 1169 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 911 |
| AflII | CTTAAG | 1 cut(s) | 74 |
| AgsI | TTSAA | 5 cut(s) | 373, 440, 653, 809, 821 |
| AjnI | CCWGG | 1 cut(s) | 25 |
| AluBI | AGCT | 5 cut(s) | 258, 656, 845, 899, 1099 |
| AluI | AGCT | 5 cut(s) | 258, 656, 845, 899, 1099 |
| Alw21I | GWGCWC | 1 cut(s) | 465 |
| Alw26I | GTCTC | 1 cut(s) | 564 |
| Alw44I | GTGCAC | 1 cut(s) | 461 |
| AlwI | GGATC | 4 cut(s) | 141, 146, 431, 599 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 608 |
| AoxI | GGCC | 4 cut(s) | 28, 189, 301, 1076 |
| ApaLI | GTGCAC | 1 cut(s) | 461 |
| ApeKI | GCWGC | 8 cut(s) | 311, 346, 676, 772, 931, 944, 956, 1114 |
| ApoI | RAATTY | 2 cut(s) | 815, 874 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 738 |
| AspS9I | GGNCC | 2 cut(s) | 583, 881 |
| AsuC2I | CCSGG | 1 cut(s) | 105 |
| AsuHPI | GGTGA | 4 cut(s) | 97, 155, 220, 1079 |
| AsuII | TTCGAA | 1 cut(s) | 177 |
| AvaII | GGWCC | 2 cut(s) | 583, 881 |
| AxyI | CCTNAGG | 1 cut(s) | 81 |
| BaeGI | GKGCMC | 2 cut(s) | 105, 465 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 42, 74 |
| BauI | CACGAG | 1 cut(s) | 458 |
| BbsI | GAAGAC | 2 cut(s) | 120, 641 |
| Bbv12I | GWGCWC | 1 cut(s) | 465 |
| BbvI | GCAGC | 8 cut(s) | 323, 358, 688, 784, 943, 943, 956, 1126 |
| BccI | CCATC | 3 cut(s) | 88, 407, 694 |
| BceAI | ACGGC | 1 cut(s) | 656 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 398, 432 |
| BciT130I | CCWGG | 1 cut(s) | 27 |
| BcnI | CCSGG | 1 cut(s) | 105 |
| BcoDI | GTCTC | 1 cut(s) | 564 |
| BfaI | CTAG | 4 cut(s) | 794, 839, 911, 926 |
| BfmI | CTRYAG | 2 cut(s) | 770, 1059 |
| BfrI | CTTAAG | 1 cut(s) | 74 |
| BfuAI | ACCTGC | 1 cut(s) | 838 |
| BglII | AGATCT | 2 cut(s) | 214, 321 |
| BisI | GCNGC | 9 cut(s) | 312, 347, 629, 677, 773, 932, 945, 957, 1115 |
| BlsI | GCNGC | 9 cut(s) | 313, 348, 630, 678, 774, 933, 946, 958, 1116 |
| BmcAI | AGTACT | 1 cut(s) | 1169 |
| Bme1390I | CCNGG | 2 cut(s) | 27, 105 |
| Bme18I | GGWCC | 2 cut(s) | 583, 881 |
| BmgT120I | GGNCC | 2 cut(s) | 583, 881 |
| BmiI | GGNNCC | 1 cut(s) | 627 |
| BmrFI | CCNGG | 2 cut(s) | 27, 105 |
| BmsI | GCATC | 3 cut(s) | 552, 931, 956 |
| BpiI | GAAGAC | 2 cut(s) | 120, 641 |
| Bpu14I | TTCGAA | 1 cut(s) | 177 |
| BpuEI | CTTGAG | 2 cut(s) | 220, 1069 |
| BpuMI | CCSGG | 1 cut(s) | 105 |
| BsaAI | YACGTR | 1 cut(s) | 263 |
| BsaBI | GATNNNNATC | 1 cut(s) | 339 |
| BsaJI | CCNNGG | 4 cut(s) | 45, 155, 315, 1125 |
| BsaWI | WCCGGW | 1 cut(s) | 1003 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 274, 304, 561, 591 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 911 |
| Bse1I | ACTGG | 1 cut(s) | 1079 |
| Bse21I | CCTNAGG | 1 cut(s) | 81 |
| Bse8I | GATNNNNATC | 1 cut(s) | 339 |
| BseBI | CCWGG | 1 cut(s) | 27 |
| BseDI | CCNNGG | 4 cut(s) | 45, 155, 315, 1125 |
| BseGI | GGATG | 2 cut(s) | 99, 760 |
| BseJI | GATNNNNATC | 1 cut(s) | 339 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 911 |
| BseMII | CTCAG | 1 cut(s) | 612 |
| BseNI | ACTGG | 1 cut(s) | 1079 |
| BseRI | GAGGAG | 3 cut(s) | 217, 572, 638 |
| BseSI | GKGCMC | 2 cut(s) | 105, 465 |
| BseXI | GCAGC | 8 cut(s) | 323, 358, 688, 784, 943, 943, 956, 1126 |
| BshFI | GGCC | 4 cut(s) | 30, 191, 303, 1078 |
| BsiHKAI | GWGCWC | 1 cut(s) | 465 |
| BsiSI | CCGG | 3 cut(s) | 105, 527, 1004 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 911 |
| BsmAI | GTCTC | 1 cut(s) | 564 |
| BsmI | GAATGC | 2 cut(s) | 313, 1150 |
| BsnI | GGCC | 4 cut(s) | 30, 191, 303, 1078 |
| Bsp119I | TTCGAA | 1 cut(s) | 177 |
| Bsp1286I | GDGCHC | 2 cut(s) | 105, 465 |
| Bsp143I | GATC | 6 cut(s) | 133, 151, 214, 321, 423, 604 |
| Bsp19I | CCATGG | 2 cut(s) | 45, 1125 |
| BspACI | CCGC | 4 cut(s) | 288, 629, 717, 884 |
| BspANI | GGCC | 4 cut(s) | 30, 191, 303, 1078 |
| BspCNI | CTCAG | 1 cut(s) | 613 |
| BspLI | GGNNCC | 1 cut(s) | 627 |
| BspMAI | CTGCAG | 1 cut(s) | 774 |
| BspMI | ACCTGC | 1 cut(s) | 838 |
| BspPI | GGATC | 4 cut(s) | 141, 146, 431, 599 |
| BspQI | GCTCTTC | 1 cut(s) | 1089 |
| BspT104I | TTCGAA | 1 cut(s) | 177 |
| BspTI | CTTAAG | 1 cut(s) | 74 |
| BsrI | ACTGG | 1 cut(s) | 1079 |
| BssECI | CCNNGG | 4 cut(s) | 45, 155, 315, 1125 |
| BssMI | GATC | 6 cut(s) | 133, 151, 214, 321, 423, 604 |
| BssSI | CACGAG | 1 cut(s) | 458 |
| BssT1I | CCWWGG | 4 cut(s) | 45, 155, 315, 1125 |
| Bst2BI | CACGAG | 1 cut(s) | 458 |
| Bst2UI | CCWGG | 1 cut(s) | 27 |
| Bst4CI | ACNGT | 2 cut(s) | 143, 277 |
| Bst6I | CTCTTC | 4 cut(s) | 366, 549, 804, 1089 |
| BstAFI | CTTAAG | 1 cut(s) | 74 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 830, 953 |
| BstBAI | YACGTR | 1 cut(s) | 263 |
| BstBI | TTCGAA | 1 cut(s) | 177 |
| BstC8I | GCNNGC | 2 cut(s) | 681, 980 |
| BstDEI | CTNAG | 4 cut(s) | 81, 506, 621, 1171 |
| BstDSI | CCRYGG | 2 cut(s) | 45, 1125 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 909 |
| BstF5I | GGATG | 2 cut(s) | 99, 760 |
| BstKTI | GATC | 6 cut(s) | 136, 154, 217, 324, 426, 607 |
| BstMAI | GTCTC | 1 cut(s) | 564 |
| BstMBI | GATC | 6 cut(s) | 133, 151, 214, 321, 423, 604 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 188, 716, 830, 953, 988 |
| BstNI | CCWGG | 1 cut(s) | 27 |
| BstSCI | CCNGG | 2 cut(s) | 25, 103 |
| BstSFI | CTRYAG | 2 cut(s) | 770, 1059 |
| BstSLI | GKGCMC | 2 cut(s) | 105, 465 |
| BstV1I | GCAGC | 8 cut(s) | 323, 358, 688, 784, 943, 943, 956, 1126 |
| BstV2I | GAAGAC | 2 cut(s) | 120, 641 |
| BstX2I | RGATCY | 4 cut(s) | 133, 214, 321, 604 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1132 |
| BstYI | RGATCY | 4 cut(s) | 133, 214, 321, 604 |
| Bsu36I | CCTNAGG | 1 cut(s) | 81 |
| BsuRI | GGCC | 4 cut(s) | 30, 191, 303, 1078 |
| BtgI | CCRYGG | 2 cut(s) | 45, 1125 |
| BtsCI | GGATG | 2 cut(s) | 99, 760 |
| BveI | ACCTGC | 1 cut(s) | 838 |
| Cac8I | GCNNGC | 2 cut(s) | 681, 980 |
| CaiI | CAGNNNCTG | 1 cut(s) | 608 |
| Cfr13I | GGNCC | 2 cut(s) | 583, 881 |
| Csp6I | GTAC | 4 cut(s) | 291, 521, 713, 1168 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 726, 761, 1018, 1053 |
| CviAII | CATG | 6 cut(s) | 46, 64, 410, 427, 587, 1126 |
| CviQI | GTAC | 4 cut(s) | 291, 521, 713, 1168 |
| DdeI | CTNAG | 4 cut(s) | 81, 506, 621, 1171 |
| DpnI | GATC | 6 cut(s) | 135, 153, 216, 323, 425, 606 |
| DpnII | GATC | 6 cut(s) | 133, 151, 214, 321, 423, 604 |
| Eam1104I | CTCTTC | 4 cut(s) | 366, 549, 804, 1089 |
| EarI | CTCTTC | 4 cut(s) | 366, 549, 804, 1089 |
| Eco130I | CCWWGG | 4 cut(s) | 45, 155, 315, 1125 |
| Eco47I | GGWCC | 2 cut(s) | 583, 881 |
| Eco57I | CTGAAG | 1 cut(s) | 1044 |
| Eco81I | CCTNAGG | 1 cut(s) | 81 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 909 |
| EcoRI | GAATTC | 1 cut(s) | 874 |
| EcoRII | CCWGG | 1 cut(s) | 25 |
| EcoT14I | CCWWGG | 4 cut(s) | 45, 155, 315, 1125 |
| ErhI | CCWWGG | 4 cut(s) | 45, 155, 315, 1125 |
| FaeI | CATG | 6 cut(s) | 49, 67, 413, 430, 590, 1129 |
| FatI | CATG | 6 cut(s) | 45, 63, 409, 426, 586, 1125 |
| FauI | CCCGC | 1 cut(s) | 724 |
| Fnu4HI | GCNGC | 9 cut(s) | 312, 347, 629, 677, 773, 932, 945, 957, 1115 |
| FokI | GGATG | 2 cut(s) | 106, 767 |
| Fsp4HI | GCNGC | 9 cut(s) | 312, 347, 629, 677, 773, 932, 945, 957, 1115 |
| FspBI | CTAG | 4 cut(s) | 794, 839, 911, 926 |
| GluI | GCNGC | 9 cut(s) | 312, 347, 629, 677, 773, 932, 945, 957, 1115 |
| HaeIII | GGCC | 4 cut(s) | 30, 191, 303, 1078 |
| HapII | CCGG | 3 cut(s) | 105, 527, 1004 |
| Hin1II | CATG | 6 cut(s) | 49, 67, 413, 430, 590, 1129 |
| HinfI | GANTC | 3 cut(s) | 174, 611, 695 |
| HpaII | CCGG | 3 cut(s) | 105, 527, 1004 |
| HphI | GGTGA | 4 cut(s) | 97, 155, 220, 1079 |
| Hpy166II | GTNNAC | 4 cut(s) | 88, 463, 478, 503 |
| Hpy188I | TCNGA | 2 cut(s) | 700, 1159 |
| Hpy188III | TCNNGA | 5 cut(s) | 332, 373, 608, 879, 926 |
| Hpy8I | GTNNAC | 4 cut(s) | 88, 463, 478, 503 |
| HpyCH4III | ACNGT | 2 cut(s) | 143, 277 |
| HpyCH4IV | ACGT | 3 cut(s) | 117, 262, 646 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 188, 716, 830, 953, 988 |
| HpyF3I | CTNAG | 4 cut(s) | 81, 506, 621, 1171 |
| HpySE526I | ACGT | 3 cut(s) | 117, 262, 646 |
| Hsp92II | CATG | 6 cut(s) | 49, 67, 413, 430, 590, 1129 |
| Kzo9I | GATC | 6 cut(s) | 133, 151, 214, 321, 423, 604 |
| LguI | GCTCTTC | 1 cut(s) | 1089 |
| LmnI | GCTCC | 2 cut(s) | 625, 1009 |
| Lsp1109I | GCAGC | 8 cut(s) | 323, 358, 688, 784, 943, 943, 956, 1126 |
| LweI | GCATC | 3 cut(s) | 552, 931, 956 |
| MaeI | CTAG | 4 cut(s) | 794, 839, 911, 926 |
| MaeII | ACGT | 3 cut(s) | 117, 262, 646 |
| MaeIII | GTNAC | 4 cut(s) | 143, 450, 616, 1052 |
| MalI | GATC | 6 cut(s) | 135, 153, 216, 323, 425, 606 |
| MboI | GATC | 6 cut(s) | 133, 151, 214, 321, 423, 604 |
| MfeI | CAATTG | 2 cut(s) | 776, 890 |
| MflI | RGATCY | 4 cut(s) | 133, 214, 321, 604 |
| MhlI | GDGCHC | 2 cut(s) | 105, 465 |
| MluCI | AATT | 5 cut(s) | 668, 776, 815, 874, 890 |
| MmeI | TCCRAC | 1 cut(s) | 111 |
| MnlI | CCTC | 9 cut(s) | 195, 198, 550, 574, 616, 805, 908, 915, 1034 |
| MroXI | GAANNNNTTC | 1 cut(s) | 738 |
| MseI | TTAA | 1 cut(s) | 75 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1130 |
| MspCI | CTTAAG | 1 cut(s) | 74 |
| MspI | CCGG | 3 cut(s) | 105, 527, 1004 |
| MspR9I | CCNGG | 2 cut(s) | 27, 105 |
| MunI | CAATTG | 2 cut(s) | 776, 890 |
| Mva1269I | GAATGC | 2 cut(s) | 313, 1150 |
| MvaI | CCWGG | 1 cut(s) | 27 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 188, 716, 830, 953, 988 |
| NciI | CCSGG | 1 cut(s) | 105 |
| NcoI | CCATGG | 2 cut(s) | 45, 1125 |
| NdeII | GATC | 6 cut(s) | 133, 151, 214, 321, 423, 604 |
| NlaIII | CATG | 6 cut(s) | 49, 67, 413, 430, 590, 1129 |
| NlaIV | GGNNCC | 1 cut(s) | 627 |
| NmuCI | GTSAC | 3 cut(s) | 143, 450, 1052 |
| NspV | TTCGAA | 1 cut(s) | 177 |
| PciSI | GCTCTTC | 1 cut(s) | 1089 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 123, 147, 268 |
| PctI | GAATGC | 2 cut(s) | 313, 1150 |
| PdmI | GAANNNNTTC | 1 cut(s) | 738 |
| PfeI | GAWTC | 3 cut(s) | 174, 611, 695 |
| PflFI | GACNNNGTC | 1 cut(s) | 575 |
| PkrI | GCNGC | 9 cut(s) | 313, 348, 630, 678, 774, 933, 946, 958, 1116 |
| Ppu21I | YACGTR | 1 cut(s) | 263 |
| Psp6I | CCWGG | 1 cut(s) | 25 |
| PspGI | CCWGG | 1 cut(s) | 25 |
| PspN4I | GGNNCC | 1 cut(s) | 627 |
| PspPI | GGNCC | 2 cut(s) | 583, 881 |
| PstI | CTGCAG | 1 cut(s) | 774 |
| PstNI | CAGNNNCTG | 1 cut(s) | 608 |
| PsuI | RGATCY | 4 cut(s) | 133, 214, 321, 604 |
| PsyI | GACNNNGTC | 1 cut(s) | 575 |
| RsaI | GTAC | 4 cut(s) | 292, 522, 714, 1169 |
| RsaNI | GTAC | 4 cut(s) | 291, 521, 713, 1168 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1130 |
| SapI | GCTCTTC | 1 cut(s) | 1089 |
| SaqAI | TTAA | 1 cut(s) | 75 |
| SatI | GCNGC | 9 cut(s) | 312, 347, 629, 677, 773, 932, 945, 957, 1115 |
| Sau3AI | GATC | 6 cut(s) | 133, 151, 214, 321, 423, 604 |
| Sau96I | GGNCC | 2 cut(s) | 583, 881 |
| ScaI | AGTACT | 1 cut(s) | 1169 |
| ScrFI | CCNGG | 2 cut(s) | 27, 105 |
| SduI | GDGCHC | 2 cut(s) | 105, 465 |
| SfaNI | GCATC | 3 cut(s) | 552, 931, 956 |
| SfcI | CTRYAG | 2 cut(s) | 770, 1059 |
| SfuI | TTCGAA | 1 cut(s) | 177 |
| SinI | GGWCC | 2 cut(s) | 583, 881 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1130 |
| SmlI | CTYRAG | 3 cut(s) | 74, 199, 1048 |
| SmoI | CTYRAG | 3 cut(s) | 74, 199, 1048 |
| Sse9I | AATT | 5 cut(s) | 668, 776, 815, 874, 890 |
| SsiI | CCGC | 4 cut(s) | 288, 629, 717, 884 |
| SspMI | CTAG | 4 cut(s) | 794, 839, 911, 926 |
| StyD4I | CCNGG | 2 cut(s) | 25, 103 |
| StyI | CCWWGG | 4 cut(s) | 45, 155, 315, 1125 |
| TaaI | ACNGT | 2 cut(s) | 143, 277 |
| TaiI | ACGT | 3 cut(s) | 120, 265, 649 |
| TaqI | TCGA | 2 cut(s) | 177, 579 |
| TasI | AATT | 5 cut(s) | 668, 776, 815, 874, 890 |
| TatI | WGTACW | 2 cut(s) | 520, 1167 |
| TauI | GCSGC | 1 cut(s) | 631 |
| TfiI | GAWTC | 3 cut(s) | 174, 611, 695 |
| Tru1I | TTAA | 1 cut(s) | 75 |
| Tru9I | TTAA | 1 cut(s) | 75 |
| TseFI | GTSAC | 3 cut(s) | 143, 450, 1052 |
| TseI | GCWGC | 8 cut(s) | 311, 346, 676, 772, 931, 944, 956, 1114 |
| Tsp45I | GTSAC | 3 cut(s) | 143, 450, 1052 |
| TspDTI | ATGAA | 3 cut(s) | 69, 747, 1118 |
| TspGWI | ACGGA | 1 cut(s) | 606 |
| Tth111I | GACNNNGTC | 1 cut(s) | 575 |
| Vha464I | CTTAAG | 1 cut(s) | 74 |
| VneI | GTGCAC | 1 cut(s) | 461 |
| VpaK11BI | GGWCC | 2 cut(s) | 583, 881 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 909 |
| XapI | RAATTY | 2 cut(s) | 815, 874 |
| XbaI | TCTAGA | 1 cut(s) | 925 |
| XmnI | GAANNNNTTC | 1 cut(s) | 738 |
| XspI | CTAG | 4 cut(s) | 794, 839, 911, 926 |
| ZrmI | AGTACT | 1 cut(s) | 1169 |