Rmu_sc0008835.1_g000013
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008835.1
OG0000076
Physical Location & Seq
Reverse (-)
52775 .. 54157
1383 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008835.1_g000013.1.cds

Sequence Viewer

Length: 1383 bp
atgcagcgagagtttccaatggagaatagcagaggcaatcaacttcctggtcagaggttctgccccatggacgatgaactagttctcttctatctcaagcccatgttgagcggacagaacgtgcccggcagaaaccgcgtggtgttcgactgcgacctctacggtcaccaagaaccttgggagatatgggaggccttcaagaccaaaagaccacacgacttgaggctcaacaaggacatttacttcttcacccaacacaagaagatgagttccacagacaagcgcgtacgccggaatgttggaagtggcacgtggaagggcgacgactccggcaagccaatacgatatgttgaaactggtcgtgttgttggcttgaagaaaagatatacttacaagaacgatgactcggtgcacaatggctgttggatcttgtatgagttctaccttgatcgatcactcagagacaagaaacaaaaggtgaaagactatgttctttgtctactacgaaagaatggtgaacccaaaaccaagattgaaaagaagagaaagcaacgtgaagaggaagaggttcttgaaaacaattatgcgctcaatgatggagaaaactcaaaaagggagcaagaagagttgcttgagctacaagcgaagcggcaacgaactgtgccattcattggtaatgcaccaccaacaatgacatcagaagatgatgctgcatttgcagctgaactagaagattcattggaatgctttgaagatgaaaatgcaccactaacaatcccatcagaagaagatgcttcattcgcagctgaactagaagagtcattggaatgctttgaagatgataatgcaccctcagaagctcgagcaattggctttcaagctgaggagaatggtggacttcaacaattagcagccgaggttcaatcaggcccttcatttgtagacaatcatggaatatttaatccgctgccggaggaagactttatcttggcggaaatgttagaagaaatgggtatggtagaaattgaagaaccagttcttaatggtaagagtattaatatagatgtggctgaagaaaacgtggaaaacaatacccttctttctgctcccagatcatccatgtctgcggcctatgatgcttgcaatgatatgtcatatttatcctcggcaaatggttgcattgatctatgtgaaagcaataatgtttgtggaggatcgattggctttcaggataatggtgcgtactgggttgagtctttggtggaggtcccaagtactgttgagcaacaaaagacagctgatgaagattgtttagattggttggagtcgatcaattttggtcctgaggagaacaacttccttttcagtgaaatgcaatggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

460

Amino Acids

52.45

Weight (kDa)

4.5

Isoelectric Point (pI)

60.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 671
AccBSI CCGCTC 1 cut(s) 111
AccI GTMKAC 2 cut(s) 499, 942
AccII CGCG 2 cut(s) 138, 285
AciI CCGC 6 cut(s) 111, 136, 649, 965, 992, 1127
AclWI GGATC 2 cut(s) 434, 1222
AcuI CTGAAG 1 cut(s) 1092
AcvI CACGTG 1 cut(s) 312
AfaI GTAC 3 cut(s) 288, 1244, 1276
AfiI CCNNNNNNNGG 1 cut(s) 671
AhlI ACTAGT 1 cut(s) 79
AjnI CCWGG 1 cut(s) 46
AluBI AGCT 6 cut(s) 637, 722, 806, 860, 881, 1298
AluI AGCT 6 cut(s) 637, 722, 806, 860, 881, 1298
Alw21I GWGCWC 1 cut(s) 414
Alw26I GTCTC 1 cut(s) 456
Alw44I GTGCAC 1 cut(s) 410
AlwI GGATC 2 cut(s) 434, 1222
Ama87I CYCGRG 1 cut(s) 861
AoxI GGCC 3 cut(s) 192, 928, 1128
ApaLI GTGCAC 1 cut(s) 410
ApeKI GCWGC 6 cut(s) 4, 710, 719, 803, 911, 967
AseI ATTAAT 1 cut(s) 1056
Asp700I GAANNNNTTC 4 cut(s) 81, 567, 1035, 1355
AspLEI GCGC 2 cut(s) 285, 589
AspS9I GGNCC 3 cut(s) 929, 1267, 1340
AsuC2I CCSGG 1 cut(s) 126
AsuHPI GGTGA 4 cut(s) 158, 241, 490, 527
AvaI CYCGRG 1 cut(s) 861
AvaII GGWCC 2 cut(s) 1267, 1340
AxyI CCTNAGG 1 cut(s) 1344
BaeGI GKGCMC 2 cut(s) 126, 414
BbrPI CACGTG 1 cut(s) 312
BbsI GAAGAC 1 cut(s) 984
Bbv12I GWGCWC 1 cut(s) 414
BbvCI CCTCAGC 1 cut(s) 882
BbvI GCAGC 6 cut(s) 16, 697, 731, 815, 923, 954
BccI CCATC 2 cut(s) 590, 787
BciT130I CCWGG 1 cut(s) 48
BcnI CCSGG 1 cut(s) 126
BcoDI GTCTC 1 cut(s) 456
BcuI ACTAGT 1 cut(s) 79
BfaI CTAG 3 cut(s) 80, 728, 812
BisI GCNGC 8 cut(s) 5, 650, 711, 720, 804, 912, 968, 1128
BlsI GCNGC 8 cut(s) 6, 651, 712, 721, 805, 913, 969, 1129
BmcAI AGTACT 1 cut(s) 1276
Bme1390I CCNGG 2 cut(s) 48, 126
Bme18I GGWCC 2 cut(s) 1267, 1340
BmeT110I CYCGRG 1 cut(s) 861
BmgT120I GGNCC 3 cut(s) 929, 1267, 1340
BmiI GGNNCC 1 cut(s) 1269
BmrFI CCNGG 2 cut(s) 48, 126
BmrI ACTGGG 1 cut(s) 1255
BmsI GCATC 3 cut(s) 697, 781, 1126
BmuI ACTGGG 1 cut(s) 1255
BpiI GAAGAC 1 cut(s) 984
Bpu10I CCTNAGC 1 cut(s) 882
BpuEI CTTGAG 3 cut(s) 80, 241, 653
BpuMI CCSGG 1 cut(s) 126
Bsa29I ATCGAT 2 cut(s) 451, 1217
BsaAI YACGTR 1 cut(s) 312
BsaJI CCNNGG 4 cut(s) 66, 176, 915, 1164
Bsc4I CCNNNNNNNGG 1 cut(s) 671
Bse1I ACTGG 3 cut(s) 361, 1034, 1250
Bse21I CCTNAGG 1 cut(s) 1344
Bse3DI GCAATG 2 cut(s) 1150, 1382
BseBI CCWGG 1 cut(s) 48
BseCI ATCGAT 2 cut(s) 451, 1217
BseDI CCNNGG 4 cut(s) 66, 176, 915, 1164
BseGI GGATG 1 cut(s) 1115
BseLI CCNNNNNNNGG 1 cut(s) 671
BseMI GCAATG 2 cut(s) 1150, 1382
BseMII CTCAG 4 cut(s) 472, 867, 873, 1335
BseNI ACTGG 3 cut(s) 361, 1034, 1250
BseRI GAGGAG 2 cut(s) 899, 1361
BseSI GKGCMC 2 cut(s) 126, 414
BseXI GCAGC 6 cut(s) 16, 697, 731, 815, 923, 954
Bsh1236I CGCG 2 cut(s) 138, 285
BshFI GGCC 3 cut(s) 194, 930, 1130
BshVI ATCGAT 2 cut(s) 451, 1217
BsiHKAI GWGCWC 1 cut(s) 414
BsiHKCI CYCGRG 1 cut(s) 861
BsiSI CCGG 4 cut(s) 126, 292, 330, 971
BsiWI CGTACG 1 cut(s) 286
BslFI GGGAC 1 cut(s) 1253
BslI CCNNNNNNNGG 1 cut(s) 671
BsmAI GTCTC 1 cut(s) 456
BsmFI GGGAC 1 cut(s) 1253
BsmI GAATGC 2 cut(s) 749, 833
BsnI GGCC 3 cut(s) 194, 930, 1130
BsoBI CYCGRG 1 cut(s) 861
Bsp1286I GDGCHC 2 cut(s) 126, 414
Bsp143I GATC 7 cut(s) 426, 448, 452, 1112, 1183, 1214, 1329
Bsp19I CCATGG 1 cut(s) 66
BspACI CCGC 6 cut(s) 111, 136, 649, 965, 992, 1127
BspANI GGCC 3 cut(s) 194, 930, 1130
BspCNI CTCAG 4 cut(s) 471, 866, 874, 1336
BspDI ATCGAT 2 cut(s) 451, 1217
BspFNI CGCG 2 cut(s) 138, 285
BspLI GGNNCC 1 cut(s) 1269
BspPI GGATC 2 cut(s) 434, 1222
BsrBI CCGCTC 1 cut(s) 111
BsrDI GCAATG 2 cut(s) 1150, 1382
BsrI ACTGG 3 cut(s) 361, 1034, 1250
BssECI CCNNGG 4 cut(s) 66, 176, 915, 1164
BssMI GATC 7 cut(s) 426, 448, 452, 1112, 1183, 1214, 1329
BssT1I CCWWGG 2 cut(s) 66, 176
Bst2UI CCWGG 1 cut(s) 48
Bst4CI ACNGT 3 cut(s) 164, 661, 1279
Bst6I CTCTTC 6 cut(s) 92, 536, 552, 558, 618, 810
BstBAI YACGTR 1 cut(s) 312
BstC8I GCNNGC 2 cut(s) 335, 1141
BstDEI CTNAG 4 cut(s) 458, 853, 882, 1344
BstDSI CCRYGG 1 cut(s) 66
BstEII GGTNACC 1 cut(s) 164
BstF5I GGATG 1 cut(s) 1115
BstFNI CGCG 2 cut(s) 138, 285
BstHHI GCGC 2 cut(s) 285, 589
BstKTI GATC 7 cut(s) 429, 451, 455, 1115, 1186, 1217, 1332
BstMAI GTCTC 1 cut(s) 456
BstMBI GATC 7 cut(s) 426, 448, 452, 1112, 1183, 1214, 1329
BstMWI GCNNNNNNNGC 5 cut(s) 135, 716, 719, 800, 1136
BstNI CCWGG 1 cut(s) 48
BstPI GGTNACC 1 cut(s) 164
BstSCI CCNGG 2 cut(s) 46, 124
BstSLI GKGCMC 2 cut(s) 126, 414
BstUI CGCG 2 cut(s) 138, 285
BstV1I GCAGC 6 cut(s) 16, 697, 731, 815, 923, 954
BstV2I GAAGAC 1 cut(s) 984
BstX2I RGATCY 1 cut(s) 426
BstYI RGATCY 1 cut(s) 426
Bsu15I ATCGAT 2 cut(s) 451, 1217
Bsu36I CCTNAGG 1 cut(s) 1344
BsuRI GGCC 3 cut(s) 194, 930, 1130
BsuTUI ATCGAT 2 cut(s) 451, 1217
BtgI CCRYGG 1 cut(s) 66
BtsCI GGATG 1 cut(s) 1115
BtsIMutI CAGTG 1 cut(s) 1372
Cac8I GCNNGC 2 cut(s) 335, 1141
CfoI GCGC 2 cut(s) 285, 589
Cfr13I GGNCC 3 cut(s) 929, 1267, 1340
ClaI ATCGAT 2 cut(s) 451, 1217
Csp6I GTAC 3 cut(s) 287, 1243, 1275
CspCI CAANNNNNGTGG 2 cut(s) 201, 236
CviAII CATG 4 cut(s) 67, 103, 950, 1120
CviQI GTAC 3 cut(s) 287, 1243, 1275
DdeI CTNAG 4 cut(s) 458, 853, 882, 1344
DpnI GATC 7 cut(s) 428, 450, 454, 1114, 1185, 1216, 1331
DpnII GATC 7 cut(s) 426, 448, 452, 1112, 1183, 1214, 1329
Eam1104I CTCTTC 6 cut(s) 92, 536, 552, 558, 618, 810
EarI CTCTTC 6 cut(s) 92, 536, 552, 558, 618, 810
EciI GGCGGA 1 cut(s) 1007
Eco130I CCWWGG 2 cut(s) 66, 176
Eco147I AGGCCT 1 cut(s) 194
Eco47I GGWCC 2 cut(s) 1267, 1340
Eco57I CTGAAG 1 cut(s) 1092
Eco72I CACGTG 1 cut(s) 312
Eco81I CCTNAGG 1 cut(s) 1344
Eco88I CYCGRG 1 cut(s) 861
Eco91I GGTNACC 1 cut(s) 164
EcoO109I RGGNCCY 2 cut(s) 929, 1267
EcoO65I GGTNACC 1 cut(s) 164
EcoRII CCWGG 1 cut(s) 46
EcoT14I CCWWGG 2 cut(s) 66, 176
ErhI CCWWGG 2 cut(s) 66, 176
FaeI CATG 4 cut(s) 70, 106, 953, 1123
FalI AAGNNNNNCTT 6 cut(s) 373, 405, 555, 587, 615, 647
FaqI GGGAC 1 cut(s) 1253
FatI CATG 4 cut(s) 66, 102, 949, 1119
FblI GTMKAC 2 cut(s) 499, 942
Fnu4HI GCNGC 8 cut(s) 5, 650, 711, 720, 804, 912, 968, 1128
FokI GGATG 1 cut(s) 1102
Fsp4HI GCNGC 8 cut(s) 5, 650, 711, 720, 804, 912, 968, 1128
FspBI CTAG 3 cut(s) 80, 728, 812
GlaI GCGC 2 cut(s) 284, 588
GluI GCNGC 8 cut(s) 5, 650, 711, 720, 804, 912, 968, 1128
HaeIII GGCC 3 cut(s) 194, 930, 1130
HapII CCGG 4 cut(s) 126, 292, 330, 971
HhaI GCGC 2 cut(s) 285, 589
Hin1II CATG 4 cut(s) 70, 106, 953, 1123
Hin6I GCGC 2 cut(s) 283, 587
HinP1I GCGC 2 cut(s) 283, 587
HinfI GANTC 6 cut(s) 326, 404, 734, 818, 1253, 1325
HpaII CCGG 4 cut(s) 126, 292, 330, 971
HphI GGTGA 4 cut(s) 158, 241, 490, 527
Hpy166II GTNNAC 5 cut(s) 412, 500, 518, 896, 943
Hpy188I TCNGA 5 cut(s) 54, 461, 700, 784, 856
Hpy188III TCNNGA 4 cut(s) 199, 572, 1229, 1343
Hpy8I GTNNAC 5 cut(s) 412, 500, 518, 896, 943
Hpy99I CGWCG 1 cut(s) 326
HpyAV CCTTC 4 cut(s) 205, 310, 942, 1106
HpyCH4III ACNGT 3 cut(s) 164, 661, 1279
HpyCH4IV ACGT 4 cut(s) 120, 311, 553, 1080
HpyF10VI GCNNNNNNNGC 5 cut(s) 135, 716, 719, 800, 1136
HpyF3I CTNAG 4 cut(s) 458, 853, 882, 1344
HpySE526I ACGT 4 cut(s) 120, 311, 553, 1080
Hsp92II CATG 4 cut(s) 70, 106, 953, 1123
HspAI GCGC 2 cut(s) 283, 587
Kzo9I GATC 7 cut(s) 426, 448, 452, 1112, 1183, 1214, 1329
LmnI GCTCC 2 cut(s) 616, 1111
Lsp1109I GCAGC 6 cut(s) 16, 697, 731, 815, 923, 954
LweI GCATC 3 cut(s) 697, 781, 1126
MaeI CTAG 3 cut(s) 80, 728, 812
MaeII ACGT 4 cut(s) 120, 311, 553, 1080
MaeIII GTNAC 1 cut(s) 164
MalI GATC 7 cut(s) 428, 450, 454, 1114, 1185, 1216, 1331
MbiI CCGCTC 1 cut(s) 111
MboI GATC 7 cut(s) 426, 448, 452, 1112, 1183, 1214, 1329
MfeI CAATTG 1 cut(s) 867
MflI RGATCY 1 cut(s) 426
MhlI GDGCHC 2 cut(s) 126, 414
MluCI AATT 5 cut(s) 580, 867, 905, 1023, 1333
MlyI GAGTC 5 cut(s) 320, 398, 827, 1262, 1334
MmeI TCCRAC 3 cut(s) 280, 404, 1302
MroXI GAANNNNTTC 4 cut(s) 81, 567, 1035, 1355
MseI TTAA 3 cut(s) 960, 1041, 1056
MslI CAYNNNNRTG 2 cut(s) 742, 826
MspA1I CMGCKG 4 cut(s) 722, 806, 967, 1298
MspI CCGG 4 cut(s) 126, 292, 330, 971
MspR9I CCNGG 2 cut(s) 48, 126
MunI CAATTG 1 cut(s) 867
Mva1269I GAATGC 2 cut(s) 749, 833
MvaI CCWGG 1 cut(s) 48
MvnI CGCG 2 cut(s) 138, 285
MwoI GCNNNNNNNGC 5 cut(s) 135, 716, 719, 800, 1136
NciI CCSGG 1 cut(s) 126
NcoI CCATGG 1 cut(s) 66
NdeII GATC 7 cut(s) 426, 448, 452, 1112, 1183, 1214, 1329
NlaIII CATG 4 cut(s) 70, 106, 953, 1123
NlaIV GGNNCC 1 cut(s) 1269
NmeAIII GCCGAG 2 cut(s) 940, 1145
NmuCI GTSAC 1 cut(s) 164
PaeR7I CTCGAG 1 cut(s) 861
PceI AGGCCT 1 cut(s) 194
PctI GAATGC 2 cut(s) 749, 833
PdmI GAANNNNTTC 4 cut(s) 81, 567, 1035, 1355
PfeI GAWTC 1 cut(s) 734
Pfl23II CGTACG 1 cut(s) 286
PflMI CCANNNNNTGG 1 cut(s) 671
PkrI GCNGC 8 cut(s) 6, 651, 712, 721, 805, 913, 969, 1129
PleI GAGTC 5 cut(s) 320, 398, 826, 1261, 1333
PmaCI CACGTG 1 cut(s) 312
PmlI CACGTG 1 cut(s) 312
PpsI GAGTC 5 cut(s) 320, 398, 826, 1261, 1333
Ppu21I YACGTR 1 cut(s) 312
PpuMI RGGWCCY 1 cut(s) 1267
PshBI ATTAAT 1 cut(s) 1056
Psp5II RGGWCCY 1 cut(s) 1267
Psp6I CCWGG 1 cut(s) 46
PspCI CACGTG 1 cut(s) 312
PspEI GGTNACC 1 cut(s) 164
PspGI CCWGG 1 cut(s) 46
PspLI CGTACG 1 cut(s) 286
PspN4I GGNNCC 1 cut(s) 1269
PspPI GGNCC 3 cut(s) 929, 1267, 1340
PspPPI RGGWCCY 1 cut(s) 1267
PspXI VCTCGAGB 1 cut(s) 861
PsuI RGATCY 1 cut(s) 426
PvuII CAGCTG 3 cut(s) 722, 806, 1298
RsaI GTAC 3 cut(s) 288, 1244, 1276
RsaNI GTAC 3 cut(s) 287, 1243, 1275
RseI CAYNNNNRTG 2 cut(s) 742, 826
SaqAI TTAA 3 cut(s) 960, 1041, 1056
SatI GCNGC 8 cut(s) 5, 650, 711, 720, 804, 912, 968, 1128
Sau3AI GATC 7 cut(s) 426, 448, 452, 1112, 1183, 1214, 1329
Sau96I GGNCC 3 cut(s) 929, 1267, 1340
ScaI AGTACT 1 cut(s) 1276
SchI GAGTC 5 cut(s) 320, 398, 827, 1262, 1334
ScrFI CCNGG 2 cut(s) 48, 126
SduI GDGCHC 2 cut(s) 126, 414
SfaNI GCATC 3 cut(s) 697, 781, 1126
Sfr274I CTCGAG 1 cut(s) 861
SinI GGWCC 2 cut(s) 1267, 1340
SlaI CTCGAG 1 cut(s) 861
SmiMI CAYNNNNRTG 2 cut(s) 742, 826
SmlI CTYRAG 4 cut(s) 95, 220, 632, 861
SmoI CTYRAG 4 cut(s) 95, 220, 632, 861
SpeI ACTAGT 1 cut(s) 79
Sse9I AATT 5 cut(s) 580, 867, 905, 1023, 1333
SseBI AGGCCT 1 cut(s) 194
SsiI CCGC 6 cut(s) 111, 136, 649, 965, 992, 1127
SspI AATATT 1 cut(s) 957
SspMI CTAG 3 cut(s) 80, 728, 812
StuI AGGCCT 1 cut(s) 194
StyD4I CCNGG 2 cut(s) 46, 124
StyI CCWWGG 2 cut(s) 66, 176
TaaI ACNGT 3 cut(s) 164, 661, 1279
TaiI ACGT 4 cut(s) 123, 314, 556, 1083
TaqI TCGA 5 cut(s) 147, 451, 862, 1217, 1328
TasI AATT 5 cut(s) 580, 867, 905, 1023, 1333
TatI WGTACW 1 cut(s) 1274
TauI GCSGC 2 cut(s) 652, 1130
TfiI GAWTC 1 cut(s) 734
Tru1I TTAA 3 cut(s) 960, 1041, 1056
Tru9I TTAA 3 cut(s) 960, 1041, 1056
TscAI CASTG 1 cut(s) 1372
TseFI GTSAC 1 cut(s) 164
TseI GCWGC 6 cut(s) 4, 710, 719, 803, 911, 967
Tsp45I GTSAC 1 cut(s) 164
TspDTI ATGAA 7 cut(s) 90, 658, 726, 771, 786, 924, 1317
TspRI CASTG 1 cut(s) 1372
Van91I CCANNNNNTGG 1 cut(s) 671
VneI GTGCAC 1 cut(s) 410
VpaK11BI GGWCC 2 cut(s) 1267, 1340
VspI ATTAAT 1 cut(s) 1056
XhoI CTCGAG 1 cut(s) 861
XmiI GTMKAC 2 cut(s) 499, 942
XmnI GAANNNNTTC 4 cut(s) 81, 567, 1035, 1355
XspI CTAG 3 cut(s) 80, 728, 812
ZrmI AGTACT 1 cut(s) 1276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.