Rw5G019340
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000076
Physical Location & Seq
Reverse (-)
25190414 .. 25192425
2012 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G019340.1

Sequence Viewer

Length: 1398 bp
ATGGATATCCATGAGGATGGTAATGAATTACATGACGAGCATCAGCTTCTTCCGGGCTACAGGTTCTGCCCCTTGGAGGAGGAACTAATCCTCCGCTATCTATGTCCCAAGGTCAAAGGAGAAGAGGTACCCGGTGAAGACTATTTGATTTTCAACTCCAATTTGTACGGTGAACAAGAGCCTTGGGACATATGGGACATGTACAAAGAAAGAAGAAAGAACGACTTGAGGTTCAACAAAGATCTCTACTTCTTCACTCAACGAAAGAAGATGACTGTGAATGCCTCCCGGAAGGGCCGATCTATCGGAAGCGGCACCTGGAAAGGGGGGGACGCTGCCAAGAACGTATACGCAAGTGGCATTGTTGTCGGTTACAGGAAAAGATTTACTTATGAGAAAAAGGGGTCCGAGCAACATGGCAGATGGATCATGCTCGAGTTTGAACTTGATCACTCGCAAGTAGGCATGCTTGACCAACAAGAGGCACAAAAATATGTCCTATGCATCCTTAGGAAAAATGAGGGATCCAAAGAGAAAAGGAAACGGGTTGATGATGATGACCGGGAGAAGCTTGCTACCGGAGATGATGTCCCCGATGATTGTCAAGCACTGGATGGATATAAGAATATGAAACAAGAGGAATCCGAAATTAAACAAGGAGAGGAAGATCAACTTATGCATGCAATTACCGGAGATGTCCGCGATGCTGGTCCATCATTATCTTCTGAACTGCAAGGGGAAGAAAACTGTTGGGTGCAATACCTGAGCCCTATACTATTGGTTCACGATGACAATGTGCTGCCACCATATGCAGATGCCTTGCAGTGGGAAGAAGAAAATTATTTGGGTAAACAATCCACTGTGCCAGGCTTCGAGGACAATGTGCAACCATTTCTAGTAGCTGATCATGAACTGCAAAGGAAAGCAGAAAATTGCGGAAAGCAATGCCTAGAACATAGGCCATTGGTGCCACCATTTACAGCTGATTGCGAAATAATGATCCACATGCTAGGGGCAGAGAATTATTTGTCGAAACAGTGCCCTGTGCAATGCATCTACTGTGACTTTGACGTACAACCATTTGCAGCAGCTAACGAACTGAGTAATATCTACATGTTGGGGGAAGAGCATCCTGTTCCAAGAGTAGCTGAACAAGAGGGTAGTAGCTTGAAAGAGAAACAAAATGCAAGCATGGTCAGTACTTCAACTGATCATCAGCCTGACATGGTTGCCTCGAAAAGTACTTCAACCGATCATCATCGAGCTGATGATCCTATAGGAAGCAACGATGTTGATGAAGGGTTGGCTGCAGGTACTCATGGTTTCAAATATAACCCTTGGATACTATCTTTTTCAGAGGAGCTGCTACGTGGGGCTCGATCAAAATCTAAGGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

465

Amino Acids

53.08

Weight (kDa)

4.92

Isoelectric Point (pI)

48.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 18 - 149 1.4e-23 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1301
Acc65I GGTACC 1 cut(s) 127
AccB1I GGYRCC 3 cut(s) 127, 314, 967
AccI GTMKAC 1 cut(s) 348
AccII CGCG 1 cut(s) 702
AciI CCGC 4 cut(s) 94, 312, 700, 936
AclWI GGATC 5 cut(s) 434, 519, 532, 994, 1265
AfaI GTAC 7 cut(s) 129, 167, 203, 1074, 1201, 1243, 1315
AfiI CCNNNNNNNGG 4 cut(s) 76, 324, 481, 825
AflIII ACRYGT 2 cut(s) 198, 1113
AgsI TTSAA 7 cut(s) 154, 235, 443, 1171, 1206, 1248, 1327
AjnI CCWGG 2 cut(s) 317, 865
AloI GAACNNNNNNTCC 2 cut(s) 75, 107
AluBI AGCT 9 cut(s) 46, 571, 902, 983, 1091, 1148, 1167, 1265, 1363
AluI AGCT 9 cut(s) 46, 571, 902, 983, 1091, 1148, 1167, 1265, 1363
AlwI GGATC 5 cut(s) 434, 519, 532, 994, 1265
AlwNI CAGNNNCTG 1 cut(s) 66
Ama87I CYCGRG 1 cut(s) 434
AoxI GGCC 2 cut(s) 295, 959
ApeKI GCWGC 6 cut(s) 335, 799, 1085, 1088, 1307, 1363
Asp718I GGTACC 1 cut(s) 127
AspS9I GGNCC 3 cut(s) 295, 405, 710
AsuC2I CCSGG 4 cut(s) 54, 132, 289, 563
AsuHPI GGTGA 2 cut(s) 146, 182
AvaI CYCGRG 1 cut(s) 434
AvaII GGWCC 2 cut(s) 405, 710
AxyI CCTNAGG 1 cut(s) 509
BaeGI GKGCMC 1 cut(s) 1043
BamHI GGATCC 1 cut(s) 524
BanI GGYRCC 3 cut(s) 127, 314, 967
BanII GRGCYC 2 cut(s) 770, 1378
BbsI GAAGAC 1 cut(s) 144
BbvI GCAGC 6 cut(s) 322, 786, 1097, 1100, 1294, 1350
BccI CCATC 4 cut(s) 11, 417, 608, 721
BcgI CGANNNNNNTGC 2 cut(s) 349, 383
BciT130I CCWGG 2 cut(s) 319, 867
BciVI GTATCC 1 cut(s) 1335
BclI TGATCA 3 cut(s) 448, 904, 1210
BcnI CCSGG 4 cut(s) 54, 132, 289, 563
BfaI CTAG 3 cut(s) 896, 950, 1010
BfmI CTRYAG 3 cut(s) 58, 1275, 1308
BfuAI ACCTGC 1 cut(s) 1301
BfuI GTATCC 1 cut(s) 1335
BglII AGATCT 1 cut(s) 241
BisI GCNGC 7 cut(s) 313, 336, 800, 1086, 1089, 1308, 1364
BlsI GCNGC 7 cut(s) 314, 337, 801, 1087, 1090, 1309, 1365
BmcAI AGTACT 2 cut(s) 1201, 1243
Bme1390I CCNGG 6 cut(s) 54, 132, 289, 319, 563, 867
Bme18I GGWCC 2 cut(s) 405, 710
BmeT110I CYCGRG 1 cut(s) 434
BmgT120I GGNCC 3 cut(s) 295, 405, 710
BmiI GGNNCC 5 cut(s) 129, 316, 406, 526, 969
BmrFI CCNGG 6 cut(s) 54, 132, 289, 319, 563, 867
BmsI GCATC 6 cut(s) 49, 513, 694, 805, 1062, 1138
BpiI GAAGAC 1 cut(s) 144
Bpu10I CCTNAGC 1 cut(s) 764
BpuEI CTTGAG 1 cut(s) 247
BpuMI CCSGG 4 cut(s) 54, 132, 289, 563
BsaAI YACGTR 1 cut(s) 1370
BsaBI GATNNNNATC 2 cut(s) 1257, 1384
BsaJI CCNNGG 4 cut(s) 72, 108, 182, 1337
BsaWI WCCGGW 2 cut(s) 578, 689
BsaXI ACNNNNNCTCC 6 cut(s) 75, 105, 111, 141, 573, 603
Bsc4I CCNNNNNNNGG 4 cut(s) 76, 324, 481, 825
Bse1I ACTGG 1 cut(s) 615
Bse21I CCTNAGG 1 cut(s) 509
Bse3DI GCAATG 2 cut(s) 950, 1055
Bse8I GATNNNNATC 2 cut(s) 1257, 1384
BseBI CCWGG 2 cut(s) 319, 867
BseDI CCNNGG 4 cut(s) 72, 108, 182, 1337
BseGI GGATG 4 cut(s) 22, 504, 619, 1129
BseJI GATNNNNATC 2 cut(s) 1257, 1384
BseLI CCNNNNNNNGG 4 cut(s) 76, 324, 481, 825
BseMI GCAATG 2 cut(s) 950, 1055
BseMII CTCAG 2 cut(s) 755, 1091
BseNI ACTGG 1 cut(s) 615
BseRI GAGGAG 2 cut(s) 92, 1373
BseSI GKGCMC 1 cut(s) 1043
BseXI GCAGC 6 cut(s) 322, 786, 1097, 1100, 1294, 1350
Bsh1236I CGCG 1 cut(s) 702
BshFI GGCC 2 cut(s) 297, 961
BshNI GGYRCC 3 cut(s) 127, 314, 967
BsiHKCI CYCGRG 1 cut(s) 434
BsiSI CCGG 6 cut(s) 53, 132, 289, 562, 579, 690
BslFI GGGAC 5 cut(s) 90, 200, 209, 344, 575
BslI CCNNNNNNNGG 4 cut(s) 76, 324, 481, 825
BsmFI GGGAC 5 cut(s) 90, 200, 209, 344, 575
BsmI GAATGC 1 cut(s) 286
BsnI GGCC 2 cut(s) 297, 961
BsoBI CYCGRG 1 cut(s) 434
Bsp1286I GDGCHC 3 cut(s) 770, 1043, 1378
Bsp1407I TGTACA 1 cut(s) 201
BspACI CCGC 4 cut(s) 94, 312, 700, 936
BspANI GGCC 2 cut(s) 297, 961
BspCNI CTCAG 2 cut(s) 756, 1092
BspFNI CGCG 1 cut(s) 702
BspHI TCATGA 1 cut(s) 907
BspLI GGNNCC 5 cut(s) 129, 316, 406, 526, 969
BspMAI CTGCAG 1 cut(s) 1312
BspMI ACCTGC 1 cut(s) 1301
BspPI GGATC 5 cut(s) 434, 519, 532, 994, 1265
BspQI GCTCTTC 1 cut(s) 1119
BspT107I GGYRCC 3 cut(s) 127, 314, 967
BsrDI GCAATG 2 cut(s) 950, 1055
BsrGI TGTACA 1 cut(s) 201
BsrI ACTGG 1 cut(s) 615
BssECI CCNNGG 4 cut(s) 72, 108, 182, 1337
BssNAI GTATAC 1 cut(s) 349
BssT1I CCWWGG 4 cut(s) 72, 108, 182, 1337
Bst1107I GTATAC 1 cut(s) 349
Bst2UI CCWGG 2 cut(s) 319, 867
Bst4CI ACNGT 6 cut(s) 170, 277, 749, 862, 1038, 1061
Bst6I CTCTTC 2 cut(s) 117, 1119
BstAUI TGTACA 1 cut(s) 201
BstBAI YACGTR 1 cut(s) 1370
BstC8I GCNNGC 4 cut(s) 467, 573, 681, 1189
BstDEI CTNAG 4 cut(s) 509, 764, 1100, 1389
BstF5I GGATG 4 cut(s) 22, 504, 619, 1129
BstFNI CGCG 1 cut(s) 702
BstMWI GCNNNNNNNGC 1 cut(s) 967
BstNI CCWGG 2 cut(s) 319, 867
BstNSI RCATGY 5 cut(s) 202, 469, 683, 1009, 1117
BstSCI CCNGG 6 cut(s) 52, 130, 287, 317, 561, 865
BstSFI CTRYAG 3 cut(s) 58, 1275, 1308
BstSLI GKGCMC 1 cut(s) 1043
BstUI CGCG 1 cut(s) 702
BstV1I GCAGC 6 cut(s) 322, 786, 1097, 1100, 1294, 1350
BstV2I GAAGAC 1 cut(s) 144
BstX2I RGATCY 2 cut(s) 241, 524
BstXI CCANNNNNNTGG 1 cut(s) 17
BstYI RGATCY 2 cut(s) 241, 524
BstZ17I GTATAC 1 cut(s) 349
Bsu36I CCTNAGG 1 cut(s) 509
BsuI GTATCC 1 cut(s) 1335
BsuRI GGCC 2 cut(s) 297, 961
BtgZI GCGATG 1 cut(s) 717
BtsCI GGATG 4 cut(s) 22, 504, 619, 1129
BtsI GCAGTG 1 cut(s) 830
BtsIMutI CAGTG 4 cut(s) 608, 830, 858, 1043
BveI ACCTGC 1 cut(s) 1301
Cac8I GCNNGC 4 cut(s) 467, 573, 681, 1189
CaiI CAGNNNCTG 1 cut(s) 66
CciI TCATGA 1 cut(s) 907
Cfr13I GGNCC 3 cut(s) 295, 405, 710
CseI GACGC 1 cut(s) 341
Csp6I GTAC 7 cut(s) 128, 166, 202, 1073, 1200, 1242, 1314
CviQI GTAC 7 cut(s) 128, 166, 202, 1073, 1200, 1242, 1314
DdeI CTNAG 4 cut(s) 509, 764, 1100, 1389
Eam1104I CTCTTC 2 cut(s) 117, 1119
EarI CTCTTC 2 cut(s) 117, 1119
Eco130I CCWWGG 4 cut(s) 72, 108, 182, 1337
Eco24I GRGCYC 2 cut(s) 770, 1378
Eco32I GATATC 1 cut(s) 7
Eco47I GGWCC 2 cut(s) 405, 710
Eco81I CCTNAGG 1 cut(s) 509
Eco88I CYCGRG 1 cut(s) 434
EcoRII CCWGG 2 cut(s) 317, 865
EcoRV GATATC 1 cut(s) 7
EcoT14I CCWWGG 4 cut(s) 72, 108, 182, 1337
EcoT22I ATGCAT 3 cut(s) 506, 681, 1055
EcoT38I GRGCYC 2 cut(s) 770, 1378
ErhI CCWWGG 4 cut(s) 72, 108, 182, 1337
FalI AAGNNNNNCTT 6 cut(s) 209, 241, 373, 405, 657, 689
FaqI GGGAC 5 cut(s) 90, 200, 209, 344, 575
FauNDI CATATG 2 cut(s) 191, 808
FbaI TGATCA 3 cut(s) 448, 904, 1210
FblI GTMKAC 1 cut(s) 348
Fnu4HI GCNGC 7 cut(s) 313, 336, 800, 1086, 1089, 1308, 1364
FokI GGATG 4 cut(s) 29, 491, 626, 1116
FriOI GRGCYC 2 cut(s) 770, 1378
Fsp4HI GCNGC 7 cut(s) 313, 336, 800, 1086, 1089, 1308, 1364
FspBI CTAG 3 cut(s) 896, 950, 1010
GluI GCNGC 7 cut(s) 313, 336, 800, 1086, 1089, 1308, 1364
HaeIII GGCC 2 cut(s) 297, 961
HapII CCGG 6 cut(s) 53, 132, 289, 562, 579, 690
HgaI GACGC 1 cut(s) 341
HindIII AAGCTT 1 cut(s) 569
HinfI GANTC 1 cut(s) 641
HpaII CCGG 6 cut(s) 53, 132, 289, 562, 579, 690
HphI GGTGA 2 cut(s) 146, 182
Hpy166II GTNNAC 4 cut(s) 173, 349, 784, 851
Hpy188I TCNGA 5 cut(s) 308, 409, 646, 727, 1357
Hpy188III TCNNGA 2 cut(s) 785, 908
Hpy8I GTNNAC 4 cut(s) 173, 349, 784, 851
HpyAV CCTTC 2 cut(s) 286, 1292
HpyCH4III ACNGT 6 cut(s) 170, 277, 749, 862, 1038, 1061
HpyCH4IV ACGT 3 cut(s) 345, 1071, 1369
HpyF10VI GCNNNNNNNGC 1 cut(s) 967
HpyF3I CTNAG 4 cut(s) 509, 764, 1100, 1389
HpySE526I ACGT 3 cut(s) 345, 1071, 1369
KpnI GGTACC 1 cut(s) 131
Ksp22I TGATCA 3 cut(s) 448, 904, 1210
LguI GCTCTTC 1 cut(s) 1119
LmnI GCTCC 1 cut(s) 1360
Lsp1109I GCAGC 6 cut(s) 322, 786, 1097, 1100, 1294, 1350
LweI GCATC 6 cut(s) 49, 513, 694, 805, 1062, 1138
MaeI CTAG 3 cut(s) 896, 950, 1010
MaeII ACGT 3 cut(s) 345, 1071, 1369
MaeIII GTNAC 2 cut(s) 371, 1061
MflI RGATCY 2 cut(s) 241, 524
MhlI GDGCHC 3 cut(s) 770, 1043, 1378
MluCI AATT 7 cut(s) 26, 160, 648, 684, 838, 931, 1021
Mph1103I ATGCAT 3 cut(s) 506, 681, 1055
MseI TTAA 1 cut(s) 651
MslI CAYNNNNRTG 1 cut(s) 15
MspA1I CMGCKG 1 cut(s) 983
MspI CCGG 6 cut(s) 53, 132, 289, 562, 579, 690
MspR9I CCNGG 6 cut(s) 54, 132, 289, 319, 563, 867
Mva1269I GAATGC 1 cut(s) 286
MvaI CCWGG 2 cut(s) 319, 867
MvnI CGCG 1 cut(s) 702
MwoI GCNNNNNNNGC 1 cut(s) 967
NciI CCSGG 4 cut(s) 54, 132, 289, 563
NdeI CATATG 2 cut(s) 191, 808
NlaIV GGNNCC 5 cut(s) 129, 316, 406, 526, 969
NmuCI GTSAC 1 cut(s) 1061
NsiI ATGCAT 3 cut(s) 506, 681, 1055
NspI RCATGY 5 cut(s) 202, 469, 683, 1009, 1117
PaeI GCATGC 2 cut(s) 469, 683
PaeR7I CTCGAG 1 cut(s) 434
PagI TCATGA 1 cut(s) 907
PciI ACATGT 2 cut(s) 198, 1113
PciSI GCTCTTC 1 cut(s) 1119
PcsI WCGNNNNNNNCGW 1 cut(s) 1375
PctI GAATGC 1 cut(s) 286
PfeI GAWTC 1 cut(s) 641
PfoI TCCNGGA 1 cut(s) 287
PkrI GCNGC 7 cut(s) 314, 337, 801, 1087, 1090, 1309, 1365
Ppu21I YACGTR 1 cut(s) 1370
PscI ACATGT 2 cut(s) 198, 1113
Psp6I CCWGG 2 cut(s) 317, 865
PspGI CCWGG 2 cut(s) 317, 865
PspN4I GGNNCC 5 cut(s) 129, 316, 406, 526, 969
PspPI GGNCC 3 cut(s) 295, 405, 710
PspXI VCTCGAGB 1 cut(s) 434
PstI CTGCAG 1 cut(s) 1312
PstNI CAGNNNCTG 1 cut(s) 66
PsuI RGATCY 2 cut(s) 241, 524
PvuII CAGCTG 1 cut(s) 983
RsaI GTAC 7 cut(s) 129, 167, 203, 1074, 1201, 1243, 1315
RsaNI GTAC 7 cut(s) 128, 166, 202, 1073, 1200, 1242, 1314
RseI CAYNNNNRTG 1 cut(s) 15
SapI GCTCTTC 1 cut(s) 1119
SaqAI TTAA 1 cut(s) 651
SatI GCNGC 7 cut(s) 313, 336, 800, 1086, 1089, 1308, 1364
Sau96I GGNCC 3 cut(s) 295, 405, 710
ScaI AGTACT 2 cut(s) 1201, 1243
ScrFI CCNGG 6 cut(s) 54, 132, 289, 319, 563, 867
SduI GDGCHC 3 cut(s) 770, 1043, 1378
SfaNI GCATC 6 cut(s) 49, 513, 694, 805, 1062, 1138
SfcI CTRYAG 3 cut(s) 58, 1275, 1308
Sfr274I CTCGAG 1 cut(s) 434
SinI GGWCC 2 cut(s) 405, 710
SlaI CTCGAG 1 cut(s) 434
SmiMI CAYNNNNRTG 1 cut(s) 15
SmlI CTYRAG 2 cut(s) 226, 434
SmoI CTYRAG 2 cut(s) 226, 434
SphI GCATGC 2 cut(s) 469, 683
Sse9I AATT 7 cut(s) 26, 160, 648, 684, 838, 931, 1021
SsiI CCGC 4 cut(s) 94, 312, 700, 936
SspMI CTAG 3 cut(s) 896, 950, 1010
StyD4I CCNGG 6 cut(s) 52, 130, 287, 317, 561, 865
StyI CCWWGG 4 cut(s) 72, 108, 182, 1337
TaaI ACNGT 6 cut(s) 170, 277, 749, 862, 1038, 1061
TaiI ACGT 3 cut(s) 348, 1074, 1372
TaqI TCGA 6 cut(s) 435, 873, 1031, 1235, 1261, 1378
TasI AATT 7 cut(s) 26, 160, 648, 684, 838, 931, 1021
TatI WGTACW 3 cut(s) 201, 1199, 1241
TauI GCSGC 1 cut(s) 315
TfiI GAWTC 1 cut(s) 641
Tru1I TTAA 1 cut(s) 651
Tru9I TTAA 1 cut(s) 651
TscAI CASTG 4 cut(s) 615, 830, 865, 1043
TseFI GTSAC 1 cut(s) 1061
TseI GCWGC 6 cut(s) 335, 799, 1085, 1088, 1307, 1363
Tsp45I GTSAC 1 cut(s) 1061
TspDTI ATGAA 4 cut(s) 39, 644, 924, 1311
TspRI CASTG 4 cut(s) 615, 830, 865, 1043
VpaK11BI GGWCC 2 cut(s) 405, 710
XceI RCATGY 5 cut(s) 202, 469, 683, 1009, 1117
XhoI CTCGAG 1 cut(s) 434
XmiI GTMKAC 1 cut(s) 348
XspI CTAG 3 cut(s) 896, 950, 1010
ZrmI AGTACT 2 cut(s) 1201, 1243
Zsp2I ATGCAT 3 cut(s) 506, 681, 1055
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.