Rh7BG276800
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000076
Physical Location & Seq
Forward (+)
25707255 .. 25709340
2086 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG276800.1

Sequence Viewer

Length: 1176 bp
ATGGAGGATCATATGCTTCTGCCTGGCCATAGGTTTTGCCCCTTGGAGGATGAACTACTCTTGTACTACCTTAAGCCCAAGGTGAACGGGGAGGAGGTACCTGGAAAAGAGTCCCTTATTTGCGAGTTGGATCTTTACGGCGACCAAGAACCATGGAAGATATGGGAAAGATTCGAAGCAAGACGGGCAAACGACTTGAGGAAGAACAAAGATCTCTACTTCTTCACCCAAAAGAAGAAGGTCAGTGCAAAGGCCTCGCGTATAAGTCGGAAAGTTGGGAGTGGTACTTGGAAAGGCCTAGCCGCAGCCAAGGACGTATATCTTCTGGATGAGAATCAGAAGCCAACAACCACTCTTCTTGGTTTCAAGAAAACCTACACCTATCAGAATAAGCCTTCTGTGCATCATGGTCGCTGGATCATGTATGAGTTCGAACTTCATAAGTCGCAACTCCTGCCCAAGAACCAAGTAAACAAGATTAATGACTATGTTCTTTGTTTACTTAGGAAAAATGATCAACTGTCGGAAAGGAAGCGAAAAAGGCAACAAGAAGAGGAGATGCTTGAGGAGGACTATGTTGAGGATGGTGATGGAGATAATGATTTGAACTGCGATCCTGCATTGTTGCTGGAGGAGCCGCATGACAAGCGGCAGTGCCTCCTACCTTGCTCCGATAATAATGTGGCAGCACCATCATTGGAGTGGGCTGAACTAGAACAATGGTTCAACCAACAATTCTTGCAGCCATTAGAAGCTGGACCAACACCACTAGAAGATGAGCCAGCTGTTTCTTTGCAAGTGTATGAGGACTTGGGAGTGCAACAACACGTAACTGAACTGCAACTAAGGGATGAAAACTTGGGGCAGCAATGTCATGATATACCAATTACCATTACATCTAATGAAATAATGAGTGGCCTTGACTTTCACCATGACGAAAATCTAGAGCAGCAAATGGGAGATGAAGTTGGTGTCATGACAGAAGGGGAAGTCGATGCGTATGGTGGGAATTTGAGTGATGTTATGGTTGGCGAAGACTGGGCCAAGTCTTTTATGGAGGACCTAATGAATGATGAGCAGCTAAATACCATGGAAGACTGGGCCAAGTCTTTTATGGACGACCTAATGAATGATGAGCAGCTAAATACCATGGAAGTGGGCAACTGCATAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

391

Amino Acids

45.33

Weight (kDa)

4.57

Isoelectric Point (pI)

39.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 8 - 146 1.2e-23 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 97
AccB1I GGYRCC 1 cut(s) 97
AccII CGCG 1 cut(s) 259
AciI CCGC 3 cut(s) 303, 638, 649
AclWI GGATC 4 cut(s) 15, 138, 425, 608
AcoI YGGCCR 1 cut(s) 25
AcsI RAATTY 1 cut(s) 1009
AfaI GTAC 3 cut(s) 65, 99, 286
AfiI CCNNNNNNNGG 1 cut(s) 46
AflII CTTAAG 1 cut(s) 71
AflIII ACRYGT 1 cut(s) 826
AgsI TTSAA 3 cut(s) 367, 607, 727
AjnI CCWGG 2 cut(s) 22, 100
AluBI AGCT 4 cut(s) 755, 785, 1081, 1141
AluI AGCT 4 cut(s) 755, 785, 1081, 1141
AlwI GGATC 4 cut(s) 15, 138, 425, 608
AoxI GGCC 6 cut(s) 25, 252, 295, 916, 1041, 1101
ApeKI GCWGC 7 cut(s) 305, 686, 742, 865, 949, 1078, 1138
ApoI RAATTY 1 cut(s) 1009
AseI ATTAAT 1 cut(s) 480
Asp718I GGTACC 1 cut(s) 97
AspS9I GGNCC 4 cut(s) 758, 1041, 1060, 1101
AsuHPI GGTGA 4 cut(s) 94, 217, 599, 920
AsuII TTCGAA 2 cut(s) 174, 432
AvaII GGWCC 2 cut(s) 758, 1060
BalI TGGCCA 1 cut(s) 27
BanI GGYRCC 1 cut(s) 97
BbsI GAAGAC 2 cut(s) 1041, 1101
BbvI GCAGC 7 cut(s) 317, 698, 754, 877, 961, 1090, 1150
BccI CCATC 3 cut(s) 578, 584, 700
BceAI ACGGC 1 cut(s) 154
BcgI CGANNNNNNTGC 4 cut(s) 237, 271, 392, 426
BciT130I CCWGG 2 cut(s) 24, 102
BclI TGATCA 1 cut(s) 514
BfaI CTAG 4 cut(s) 299, 713, 770, 944
BfrI CTTAAG 1 cut(s) 71
BglII AGATCT 1 cut(s) 211
Bme1390I CCNGG 2 cut(s) 24, 102
Bme18I GGWCC 2 cut(s) 758, 1060
BmgT120I GGNCC 4 cut(s) 758, 1041, 1060, 1101
BmiI GGNNCC 2 cut(s) 99, 636
BmrFI CCNGG 2 cut(s) 24, 102
BmrI ACTGGG 2 cut(s) 1048, 1108
BmsI GCATC 3 cut(s) 412, 549, 985
BmuI ACTGGG 2 cut(s) 1048, 1108
BpiI GAAGAC 2 cut(s) 1041, 1101
BpmI CTGGAG 1 cut(s) 650
Bpu14I TTCGAA 2 cut(s) 174, 432
BpuEI CTTGAG 2 cut(s) 217, 584
BsaAI YACGTR 1 cut(s) 829
BsaBI GATNNNNATC 1 cut(s) 333
BsaJI CCNNGG 6 cut(s) 42, 78, 152, 309, 1089, 1149
BsaXI ACNNNNNCTCC 2 cut(s) 951, 981
Bsc4I CCNNNNNNNGG 1 cut(s) 46
Bse1I ACTGG 2 cut(s) 1043, 1103
Bse3DI GCAATG 1 cut(s) 875
Bse8I GATNNNNATC 1 cut(s) 333
BseBI CCWGG 2 cut(s) 24, 102
BseDI CCNNGG 6 cut(s) 42, 78, 152, 309, 1089, 1149
BseGI GGATG 4 cut(s) 55, 334, 589, 856
BseJI GATNNNNATC 1 cut(s) 333
BseLI CCNNNNNNNGG 1 cut(s) 46
BseMI GCAATG 1 cut(s) 875
BseNI ACTGG 2 cut(s) 1043, 1103
BseRI GAGGAG 4 cut(s) 107, 569, 581, 647
BseXI GCAGC 7 cut(s) 317, 698, 754, 877, 961, 1090, 1150
Bsh1236I CGCG 1 cut(s) 259
BshFI GGCC 6 cut(s) 27, 254, 297, 918, 1043, 1103
BshNI GGYRCC 1 cut(s) 97
BslFI GGGAC 1 cut(s) 97
BslI CCNNNNNNNGG 1 cut(s) 46
BsmFI GGGAC 1 cut(s) 97
BsnI GGCC 6 cut(s) 27, 254, 297, 918, 1043, 1103
Bsp119I TTCGAA 2 cut(s) 174, 432
Bsp143I GATC 6 cut(s) 7, 130, 211, 417, 514, 613
Bsp19I CCATGG 3 cut(s) 152, 1089, 1149
BspACI CCGC 3 cut(s) 303, 638, 649
BspANI GGCC 6 cut(s) 27, 254, 297, 918, 1043, 1103
BspFNI CGCG 1 cut(s) 259
BspHI TCATGA 2 cut(s) 874, 975
BspLI GGNNCC 2 cut(s) 99, 636
BspPI GGATC 4 cut(s) 15, 138, 425, 608
BspT104I TTCGAA 2 cut(s) 174, 432
BspT107I GGYRCC 1 cut(s) 97
BspTI CTTAAG 1 cut(s) 71
BsrDI GCAATG 1 cut(s) 875
BsrI ACTGG 2 cut(s) 1043, 1103
BssECI CCNNGG 6 cut(s) 42, 78, 152, 309, 1089, 1149
BssMI GATC 6 cut(s) 7, 130, 211, 417, 514, 613
BssT1I CCWWGG 6 cut(s) 42, 78, 152, 309, 1089, 1149
Bst2UI CCWGG 2 cut(s) 24, 102
Bst4CI ACNGT 1 cut(s) 522
Bst6I CTCTTC 2 cut(s) 360, 546
BstAFI CTTAAG 1 cut(s) 71
BstAPI GCANNNNNTGC 1 cut(s) 454
BstBAI YACGTR 1 cut(s) 829
BstBI TTCGAA 2 cut(s) 174, 432
BstC8I GCNNGC 1 cut(s) 783
BstDEI CTNAG 2 cut(s) 503, 845
BstDSI CCRYGG 3 cut(s) 152, 1089, 1149
BstF5I GGATG 4 cut(s) 55, 334, 589, 856
BstFNI CGCG 1 cut(s) 259
BstKTI GATC 6 cut(s) 10, 133, 214, 420, 517, 616
BstMBI GATC 6 cut(s) 7, 130, 211, 417, 514, 613
BstMWI GCNNNNNNNGC 6 cut(s) 185, 400, 454, 541, 634, 646
BstNI CCWGG 2 cut(s) 24, 102
BstSCI CCNGG 2 cut(s) 22, 100
BstUI CGCG 1 cut(s) 259
BstV1I GCAGC 7 cut(s) 317, 698, 754, 877, 961, 1090, 1150
BstV2I GAAGAC 2 cut(s) 1041, 1101
BstX2I RGATCY 2 cut(s) 130, 211
BstXI CCANNNNNNTGG 1 cut(s) 1156
BstYI RGATCY 2 cut(s) 130, 211
BsuRI GGCC 6 cut(s) 27, 254, 297, 918, 1043, 1103
BtgI CCRYGG 3 cut(s) 152, 1089, 1149
BtsCI GGATG 4 cut(s) 55, 334, 589, 856
BtsI GCAGTG 1 cut(s) 659
BtsIMutI CAGTG 2 cut(s) 250, 659
Cac8I GCNNGC 1 cut(s) 783
CciI TCATGA 2 cut(s) 874, 975
Cfr13I GGNCC 4 cut(s) 758, 1041, 1060, 1101
Csp6I GTAC 3 cut(s) 64, 98, 285
CspCI CAANNNNNGTGG 2 cut(s) 340, 375
CviAII CATG 9 cut(s) 153, 407, 421, 641, 875, 932, 976, 1090, 1150
CviQI GTAC 3 cut(s) 64, 98, 285
DdeI CTNAG 2 cut(s) 503, 845
DpnI GATC 6 cut(s) 9, 132, 213, 419, 516, 615
DpnII GATC 6 cut(s) 7, 130, 211, 417, 514, 613
EaeI YGGCCR 1 cut(s) 25
Eam1104I CTCTTC 2 cut(s) 360, 546
EarI CTCTTC 2 cut(s) 360, 546
Eco130I CCWWGG 6 cut(s) 42, 78, 152, 309, 1089, 1149
Eco147I AGGCCT 2 cut(s) 254, 297
Eco47I GGWCC 2 cut(s) 758, 1060
EcoO109I RGGNCCY 1 cut(s) 1060
EcoRII CCWGG 2 cut(s) 22, 100
EcoT14I CCWWGG 6 cut(s) 42, 78, 152, 309, 1089, 1149
ErhI CCWWGG 6 cut(s) 42, 78, 152, 309, 1089, 1149
FaeI CATG 9 cut(s) 156, 410, 424, 644, 878, 935, 979, 1093, 1153
FalI AAGNNNNNCTT 2 cut(s) 99, 131
FaqI GGGAC 1 cut(s) 97
FatI CATG 9 cut(s) 152, 406, 420, 640, 874, 931, 975, 1089, 1149
FauNDI CATATG 1 cut(s) 12
FbaI TGATCA 1 cut(s) 514
FokI GGATG 4 cut(s) 62, 341, 596, 863
FspBI CTAG 4 cut(s) 299, 713, 770, 944
GsuI CTGGAG 1 cut(s) 650
HaeIII GGCC 6 cut(s) 27, 254, 297, 918, 1043, 1103
Hin1II CATG 9 cut(s) 156, 410, 424, 644, 878, 935, 979, 1093, 1153
HinfI GANTC 3 cut(s) 110, 171, 334
HphI GGTGA 4 cut(s) 94, 217, 599, 920
Hpy166II GTNNAC 3 cut(s) 85, 472, 500
Hpy188I TCNGA 5 cut(s) 270, 339, 387, 526, 673
Hpy188III TCNNGA 5 cut(s) 326, 367, 875, 944, 976
Hpy8I GTNNAC 3 cut(s) 85, 472, 500
HpyAV CCTTC 3 cut(s) 232, 405, 977
HpyCH4III ACNGT 1 cut(s) 522
HpyCH4IV ACGT 2 cut(s) 315, 828
HpyCH4V TGCA 8 cut(s) 248, 403, 620, 742, 796, 820, 841, 1167
HpyF10VI GCNNNNNNNGC 6 cut(s) 185, 400, 454, 541, 634, 646
HpyF3I CTNAG 2 cut(s) 503, 845
HpySE526I ACGT 2 cut(s) 315, 828
Hsp92II CATG 9 cut(s) 156, 410, 424, 644, 878, 935, 979, 1093, 1153
KpnI GGTACC 1 cut(s) 101
Ksp22I TGATCA 1 cut(s) 514
Kzo9I GATC 6 cut(s) 7, 130, 211, 417, 514, 613
LmnI GCTCC 2 cut(s) 634, 674
Lsp1109I GCAGC 7 cut(s) 317, 698, 754, 877, 961, 1090, 1150
LweI GCATC 3 cut(s) 412, 549, 985
MaeI CTAG 4 cut(s) 299, 713, 770, 944
MaeII ACGT 2 cut(s) 315, 828
MaeIII GTNAC 1 cut(s) 829
MalI GATC 6 cut(s) 9, 132, 213, 419, 516, 615
MboI GATC 6 cut(s) 7, 130, 211, 417, 514, 613
MflI RGATCY 2 cut(s) 130, 211
MlsI TGGCCA 1 cut(s) 27
MluCI AATT 3 cut(s) 734, 885, 1009
MluNI TGGCCA 1 cut(s) 27
MlyI GAGTC 1 cut(s) 119
MmeI TCCRAC 3 cut(s) 108, 248, 504
Mox20I TGGCCA 1 cut(s) 27
MscI TGGCCA 1 cut(s) 27
MseI TTAA 2 cut(s) 72, 480
MslI CAYNNNNRTG 2 cut(s) 700, 1154
Msp20I TGGCCA 1 cut(s) 27
MspA1I CMGCKG 1 cut(s) 785
MspCI CTTAAG 1 cut(s) 71
MspR9I CCNGG 2 cut(s) 24, 102
MvaI CCWGG 2 cut(s) 24, 102
MvnI CGCG 1 cut(s) 259
MwoI GCNNNNNNNGC 6 cut(s) 185, 400, 454, 541, 634, 646
NcoI CCATGG 3 cut(s) 152, 1089, 1149
NdeI CATATG 1 cut(s) 12
NdeII GATC 6 cut(s) 7, 130, 211, 417, 514, 613
NlaIII CATG 9 cut(s) 156, 410, 424, 644, 878, 935, 979, 1093, 1153
NlaIV GGNNCC 2 cut(s) 99, 636
NspV TTCGAA 2 cut(s) 174, 432
PagI TCATGA 2 cut(s) 874, 975
PceI AGGCCT 2 cut(s) 254, 297
PfeI GAWTC 2 cut(s) 171, 334
PleI GAGTC 1 cut(s) 118
PpsI GAGTC 1 cut(s) 118
Ppu21I YACGTR 1 cut(s) 829
PpuMI RGGWCCY 1 cut(s) 1060
PshBI ATTAAT 1 cut(s) 480
Psp5II RGGWCCY 1 cut(s) 1060
Psp6I CCWGG 2 cut(s) 22, 100
PspGI CCWGG 2 cut(s) 22, 100
PspN4I GGNNCC 2 cut(s) 99, 636
PspPI GGNCC 4 cut(s) 758, 1041, 1060, 1101
PspPPI RGGWCCY 1 cut(s) 1060
PsuI RGATCY 2 cut(s) 130, 211
PvuII CAGCTG 1 cut(s) 785
RsaI GTAC 3 cut(s) 65, 99, 286
RsaNI GTAC 3 cut(s) 64, 98, 285
RseI CAYNNNNRTG 2 cut(s) 700, 1154
SaqAI TTAA 2 cut(s) 72, 480
Sau3AI GATC 6 cut(s) 7, 130, 211, 417, 514, 613
Sau96I GGNCC 4 cut(s) 758, 1041, 1060, 1101
SchI GAGTC 1 cut(s) 119
ScrFI CCNGG 2 cut(s) 24, 102
SfaNI GCATC 3 cut(s) 412, 549, 985
SfuI TTCGAA 2 cut(s) 174, 432
SinI GGWCC 2 cut(s) 758, 1060
SmiMI CAYNNNNRTG 2 cut(s) 700, 1154
SmlI CTYRAG 3 cut(s) 71, 196, 563
SmoI CTYRAG 3 cut(s) 71, 196, 563
Sse9I AATT 3 cut(s) 734, 885, 1009
SseBI AGGCCT 2 cut(s) 254, 297
SsiI CCGC 3 cut(s) 303, 638, 649
SspMI CTAG 4 cut(s) 299, 713, 770, 944
StuI AGGCCT 2 cut(s) 254, 297
StyD4I CCNGG 2 cut(s) 22, 100
StyI CCWWGG 6 cut(s) 42, 78, 152, 309, 1089, 1149
TaaI ACNGT 1 cut(s) 522
TaiI ACGT 2 cut(s) 318, 831
TaqI TCGA 3 cut(s) 174, 432, 993
TasI AATT 3 cut(s) 734, 885, 1009
TatI WGTACW 1 cut(s) 63
TauI GCSGC 3 cut(s) 305, 640, 652
TfiI GAWTC 2 cut(s) 171, 334
Tru1I TTAA 2 cut(s) 72, 480
Tru9I TTAA 2 cut(s) 72, 480
TscAI CASTG 2 cut(s) 250, 659
TseI GCWGC 7 cut(s) 305, 686, 742, 865, 949, 1078, 1138
TspDTI ATGAA 7 cut(s) 66, 428, 867, 918, 978, 1082, 1142
TspRI CASTG 2 cut(s) 250, 659
Vha464I CTTAAG 1 cut(s) 71
VpaK11BI GGWCC 2 cut(s) 758, 1060
VspI ATTAAT 1 cut(s) 480
XapI RAATTY 1 cut(s) 1009
XbaI TCTAGA 1 cut(s) 943
XcmI CCANNNNNNNNNTGG 4 cut(s) 159, 699, 1051, 1111
XspI CTAG 4 cut(s) 299, 713, 770, 944
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.