Rorug01G0206000
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000076
Physical Location & Seq
Forward (+)
28900897 .. 28914310
13414 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0206000.1

Sequence Viewer

Length: 1887 bp
ATGTCGCACTTCAAGTCTCCGATGAGGCTGTCTACGTCTCTGATCAGGCAGCTCAAGCAGAGAGTCAGAATGGGCAGCAATCCTCTGCAGTCGCACTCCAGATCCTTCACCTCCATCGAAGGCCACCGCCCGGTCATCGTCCACAAGCGCAGCCTCGACATTCTTCACGACCCTTGGTTCAATAAAGGGACATCATTTTCCATTACAGAGCGAGATCGTCTTGATCTTCGGGGACTTCTCCCTCCAAATGTCATGACATCCGATCAGCAAATTGAACGCTTTATGGCTGACCTGAAGACACTTGAACATAAAGCAAGAGATGGACCATCTGATCCAAATGCTCTGGCAATGTGGCGAATATTAAACAGGTTGCATGACAGAAATGAAACAATGTACTATAAAGTTTTGATTGCCAAGATTGCGGAATATGCACCTATAGTCTACACACCTACTGTTGGACTTGTCTGCCAGAATTACAGTGGTTTGTTTAGAAGGCCCAGGGGAATGTACTTTAGTGCGGAAGATCGTGGAGAAATGATGTCTATGGTTTATAATTGGCCAGCTGATCAGGTTGATATGATTGTTGTCACGGATGGGAGTAGAATATTGGGTCTTGGAGACCTTGGAGTCCAGGGAATTGGAATCTCAATTGGGAAGCTGGATTTATACGTTGCTGCTGCTGGAATAAACCCTCAAAGGGTACTGCCTGTGATGATTGATGTTGGAACCGACAATGAAAAGCTGCTAAAAGACCCATTGTATTTGGGATTGCAAAGACACCGTCTTGATGGTGATGAGTATATTGCTGTTATCGATGAATTCATGGAAGCAGTTTTTACTCGTTGGCCGCATGTGATTGTGCAGTTTGAAGATTTTCAAAGCAAGTGGGCCTTTAAGTTGTTACAGCGTTACAGAAATACTTTTAGAATGTTTAATGATGATGTTCAGGGTACAGCAGGAGTTGCAATTGCTGGGCTTTTAGGAGCTGTAAGGGCACAAGGGAGTCAAATGATTGACTTCCCCAAACAAAAGATTGTTGTTGCAGGTGCTGGAAGTGCAGGAATAGGGGTTCTAAATGCTGCACGGAAAACAATGGCAAGGATGTTAGGAAATAATGAACATGCATTTGAGAGTGCAGGCAGACAATTCTGGGTAGTTGATGCCAATGGCCTGATCACAGACGAACGCGAAAATGTTGATCCTGATGCGCGTCCATTTGCAAGGAAATCCAAAGAAATTCACCGTCAAGGATTGAGGGAAGGTGCAAGTCTTGTGGAAGTGGTTCAACAAGTGAAGCCTGATGTGCTTCTTGGACTTTCTGCAGTCGGGGGACTGTTCTCAAAGGAGGTATTAGAGGCCCTTAGAGGTTCAACTTCAACTAGACCAGCCATCTTTGCAATGTCAAATCCAACAAACAATGCTGAGTGCACTCCTGAAGAAGCATTTTCCATTGTGGGGGACAATGTTGTTTTTGCAAGTGGAAGTCCATTCAAAGACGTAGATCTCGGAAATGGCCATATCGGGCACTGCAACCAGGGTAACAACATGTACCTTTTCCCAGGTATTGGACTTGGTACTCTCTTATCTGGTTCCAGAGTTATCTCCGATGGGATGCTACAGGTGGCAGCAGAGTGCCTAGCTGCATATATGACAGATGAGGAGGTTCTAAAAGGGGTTATATACCCTTCAATATCTAGCATACGAGATATAACAAAGAAGGTAGCAGTGGCTGTAATAAAAGAAGCCCTAGATGAGGATCTAGCAGAAGGGTACCGTGAAATGGATGCCCGAGAGCTCCAGAAACTCAATCAGGAAGAAATTGAAGAATATGTGCAGAACAACATGTGGAGTCCAGAATACCCCACACTAGTTTATAAAAAGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

628

Amino Acids

69.99

Weight (kDa)

5.98

Isoelectric Point (pI)

35.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
malic PF00390 125 - 305 7.9e-76 Malic enzyme, N-terminal domain
Malic_M PF03949 315 - 582 3.6e-89 Malic enzyme, NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 552, 1875
AarI CACCTGC 1 cut(s) 1034
AasI GACNNNNNNGTC 1 cut(s) 626
Acc36I ACCTGC 1 cut(s) 1034
Acc65I GGTACC 1 cut(s) 1770
AccB1I GGYRCC 1 cut(s) 1770
AccB7I CCANNNNNTGG 1 cut(s) 1565
AccI GTMKAC 2 cut(s) 32, 441
AccII CGCG 2 cut(s) 1188, 1210
AciI CCGC 4 cut(s) 127, 422, 518, 848
AclWI GGATC 4 cut(s) 96, 326, 1193, 1764
AcoI YGGCCR 3 cut(s) 557, 845, 1513
AcsI RAATTY 2 cut(s) 818, 1236
AcuI CTGAAG 2 cut(s) 314, 1455
AfaI GTAC 7 cut(s) 395, 509, 702, 952, 1550, 1576, 1772
AfiI CCNNNNNNNGG 7 cut(s) 130, 455, 697, 1455, 1565, 1753, 1780
AflIII ACRYGT 2 cut(s) 1545, 1842
AhlI ACTAGT 1 cut(s) 1867
AjnI CCWGG 4 cut(s) 497, 630, 1533, 1558
AloI GAACNNNNNNTCC 2 cut(s) 1053, 1085
AluBI AGCT 7 cut(s) 52, 563, 658, 742, 986, 1640, 1795
AluI AGCT 7 cut(s) 52, 563, 658, 742, 986, 1640, 1795
Alw21I GWGCWC 2 cut(s) 1430, 1797
Alw26I GTCTC 3 cut(s) 21, 42, 612
Alw44I GTGCAC 1 cut(s) 1426
AlwI GGATC 4 cut(s) 96, 326, 1193, 1764
AlwNI CAGNNNCTG 2 cut(s) 1049, 1730
Ama87I CYCGRG 1 cut(s) 1788
AoxI GGCC 8 cut(s) 121, 494, 557, 845, 888, 1168, 1356, 1513
ApaLI GTGCAC 1 cut(s) 1426
ApeKI GCWGC 9 cut(s) 49, 75, 150, 674, 677, 742, 1079, 1625, 1640
ApoI RAATTY 2 cut(s) 818, 1236
ArsI GACNNNNNNTTYG 2 cut(s) 766, 798
Asp700I GAANNNNTTC 2 cut(s) 873, 1281
Asp718I GGTACC 1 cut(s) 1770
AspLEI GCGC 2 cut(s) 150, 1210
AspS9I GGNCC 4 cut(s) 323, 495, 888, 1357
AsuC2I CCSGG 1 cut(s) 131
AsuHPI GGTGA 3 cut(s) 100, 803, 1232
AvaI CYCGRG 1 cut(s) 1788
AvaII GGWCC 1 cut(s) 323
BaeGI GKGCMC 3 cut(s) 997, 1430, 1527
BalI TGGCCA 2 cut(s) 559, 1515
BanI GGYRCC 1 cut(s) 1770
BanII GRGCYC 1 cut(s) 1797
BbsI GAAGAC 1 cut(s) 302
Bbv12I GWGCWC 2 cut(s) 1430, 1797
BbvI GCAGC 9 cut(s) 61, 87, 162, 661, 664, 729, 1066, 1627, 1637
BccI CCATC 7 cut(s) 122, 314, 334, 587, 782, 1397, 1601
BciT130I CCWGG 4 cut(s) 499, 632, 1535, 1560
BclI TGATCA 3 cut(s) 42, 565, 1173
BcnI CCSGG 1 cut(s) 131
BcoDI GTCTC 3 cut(s) 21, 42, 612
BcuI ACTAGT 1 cut(s) 1867
BfaI CTAG 6 cut(s) 1380, 1637, 1695, 1748, 1760, 1868
BfmI CTRYAG 4 cut(s) 86, 435, 1320, 1616
BfuAI ACCTGC 1 cut(s) 1034
BglII AGATCT 1 cut(s) 1501
Bme1390I CCNGG 5 cut(s) 131, 499, 632, 1535, 1560
Bme18I GGWCC 1 cut(s) 323
BmeT110I CYCGRG 1 cut(s) 1788
BmgT120I GGNCC 4 cut(s) 323, 495, 888, 1357
BmiI GGNNCC 3 cut(s) 727, 1591, 1772
BmrFI CCNGG 5 cut(s) 131, 499, 632, 1535, 1560
BmsI GCATC 4 cut(s) 1150, 1195, 1602, 1774
BpiI GAAGAC 1 cut(s) 302
BpmI CTGGAG 2 cut(s) 82, 1781
BpuEI CTTGAG 1 cut(s) 38
BpuMI CCSGG 1 cut(s) 131
Bsa29I ATCGAT 1 cut(s) 813
BsaBI GATNNNNATC 1 cut(s) 1755
BsaI GGTCTC 1 cut(s) 612
BsaJI CCNNGG 7 cut(s) 173, 497, 498, 622, 631, 1534, 1558
Bsc4I CCNNNNNNNGG 7 cut(s) 130, 455, 697, 1455, 1565, 1753, 1780
Bse3DI GCAATG 2 cut(s) 354, 1404
Bse8I GATNNNNATC 1 cut(s) 1755
BseBI CCWGG 4 cut(s) 499, 632, 1535, 1560
BseCI ATCGAT 1 cut(s) 813
BseDI CCNNGG 7 cut(s) 173, 497, 498, 622, 631, 1534, 1558
BseGI GGATG 5 cut(s) 257, 598, 1107, 1617, 1789
BseJI GATNNNNATC 1 cut(s) 1755
BseLI CCNNNNNNNGG 7 cut(s) 130, 455, 697, 1455, 1565, 1753, 1780
BseMI GCAATG 2 cut(s) 354, 1404
BseMII CTCAG 1 cut(s) 1413
BseRI GAGGAG 1 cut(s) 1673
BseSI GKGCMC 3 cut(s) 997, 1430, 1527
BseXI GCAGC 9 cut(s) 61, 87, 162, 661, 664, 729, 1066, 1627, 1637
BseYI CCCAGC 1 cut(s) 971
BsgI GTGCAG 5 cut(s) 881, 1065, 1077, 1155, 1853
Bsh1236I CGCG 2 cut(s) 1188, 1210
BshFI GGCC 8 cut(s) 123, 496, 559, 847, 890, 1170, 1358, 1515
BshNI GGYRCC 1 cut(s) 1770
BshVI ATCGAT 1 cut(s) 813
BsiHKAI GWGCWC 2 cut(s) 1430, 1797
BsiHKCI CYCGRG 1 cut(s) 1788
BsiSI CCGG 1 cut(s) 131
BslFI GGGAC 4 cut(s) 202, 246, 1344, 1472
BslI CCNNNNNNNGG 7 cut(s) 130, 455, 697, 1455, 1565, 1753, 1780
BsmAI GTCTC 3 cut(s) 21, 42, 612
BsmBI CGTCTC 1 cut(s) 42
BsmFI GGGAC 4 cut(s) 202, 246, 1344, 1472
BsnI GGCC 8 cut(s) 123, 496, 559, 847, 890, 1170, 1358, 1515
Bso31I GGTCTC 1 cut(s) 612
BsoBI CYCGRG 1 cut(s) 1788
Bsp1286I GDGCHC 4 cut(s) 997, 1430, 1527, 1797
BspACI CCGC 4 cut(s) 127, 422, 518, 848
BspANI GGCC 8 cut(s) 123, 496, 559, 847, 890, 1170, 1358, 1515
BspCNI CTCAG 1 cut(s) 1414
BspDI ATCGAT 1 cut(s) 813
BspFNI CGCG 2 cut(s) 1188, 1210
BspHI TCATGA 1 cut(s) 252
BspLI GGNNCC 3 cut(s) 727, 1591, 1772
BspMAI CTGCAG 2 cut(s) 90, 1324
BspMI ACCTGC 1 cut(s) 1034
BspPI GGATC 4 cut(s) 96, 326, 1193, 1764
BspT107I GGYRCC 1 cut(s) 1770
BspTNI GGTCTC 1 cut(s) 612
BsrDI GCAATG 2 cut(s) 354, 1404
BssECI CCNNGG 7 cut(s) 173, 497, 498, 622, 631, 1534, 1558
BssT1I CCWWGG 2 cut(s) 173, 622
Bst2UI CCWGG 4 cut(s) 499, 632, 1535, 1560
Bst4CI ACNGT 6 cut(s) 454, 479, 782, 1244, 1335, 1775
BstAPI GCANNNNNTGC 1 cut(s) 962
BstC8I GCNNGC 2 cut(s) 561, 1138
BstDEI CTNAG 2 cut(s) 1361, 1422
BstENI CCTNNNNNAGG 1 cut(s) 1751
BstF5I GGATG 5 cut(s) 257, 598, 1107, 1617, 1789
BstFNI CGCG 2 cut(s) 1188, 1210
BstHHI GCGC 2 cut(s) 150, 1210
BstMAI GTCTC 3 cut(s) 21, 42, 612
BstMWI GCNNNNNNNGC 8 cut(s) 55, 419, 428, 962, 992, 1055, 1303, 1394
BstNI CCWGG 4 cut(s) 499, 632, 1535, 1560
BstNSI RCATGY 4 cut(s) 854, 1124, 1549, 1846
BstSCI CCNGG 5 cut(s) 129, 497, 630, 1533, 1558
BstSFI CTRYAG 4 cut(s) 86, 435, 1320, 1616
BstSLI GKGCMC 3 cut(s) 997, 1430, 1527
BstUI CGCG 2 cut(s) 1188, 1210
BstV1I GCAGC 9 cut(s) 61, 87, 162, 661, 664, 729, 1066, 1627, 1637
BstV2I GAAGAC 1 cut(s) 302
BstX2I RGATCY 3 cut(s) 101, 1501, 1756
BstXI CCANNNNNNTGG 1 cut(s) 638
BstYI RGATCY 3 cut(s) 101, 1501, 1756
Bsu15I ATCGAT 1 cut(s) 813
BsuRI GGCC 8 cut(s) 123, 496, 559, 847, 890, 1170, 1358, 1515
BsuTUI ATCGAT 1 cut(s) 813
BtsCI GGATG 5 cut(s) 257, 598, 1107, 1617, 1789
BtsI GCAGTG 2 cut(s) 1525, 1731
BtsIMutI CAGTG 3 cut(s) 484, 1525, 1731
BveI ACCTGC 1 cut(s) 1034
Cac8I GCNNGC 2 cut(s) 561, 1138
CaiI CAGNNNCTG 2 cut(s) 1049, 1730
CciI TCATGA 1 cut(s) 252
CfoI GCGC 2 cut(s) 150, 1210
Cfr13I GGNCC 4 cut(s) 323, 495, 888, 1357
ClaI ATCGAT 1 cut(s) 813
CseI GACGC 1 cut(s) 1199
Csp6I GTAC 7 cut(s) 394, 508, 701, 951, 1549, 1575, 1771
CspCI CAANNNNNGTGG 4 cut(s) 866, 901, 1254, 1289
CviAII CATG 7 cut(s) 253, 374, 823, 851, 1121, 1546, 1843
CviQI GTAC 7 cut(s) 394, 508, 701, 951, 1549, 1575, 1771
DdeI CTNAG 2 cut(s) 1361, 1422
DrdI GACNNNNNNGTC 1 cut(s) 626
DseDI GACNNNNNNGTC 1 cut(s) 626
EaeI YGGCCR 3 cut(s) 557, 845, 1513
Ecl136II GAGCTC 1 cut(s) 1795
Eco130I CCWWGG 2 cut(s) 173, 622
Eco24I GRGCYC 1 cut(s) 1797
Eco31I GGTCTC 1 cut(s) 612
Eco47I GGWCC 1 cut(s) 323
Eco53kI GAGCTC 1 cut(s) 1795
Eco57I CTGAAG 2 cut(s) 314, 1455
Eco88I CYCGRG 1 cut(s) 1788
EcoICRI GAGCTC 1 cut(s) 1795
EcoNI CCTNNNNNAGG 1 cut(s) 1751
EcoO109I RGGNCCY 1 cut(s) 1357
EcoRI GAATTC 1 cut(s) 818
EcoRII CCWGG 4 cut(s) 497, 630, 1533, 1558
EcoT14I CCWWGG 2 cut(s) 173, 622
EcoT22I ATGCAT 1 cut(s) 1126
EcoT38I GRGCYC 1 cut(s) 1797
ErhI CCWWGG 2 cut(s) 173, 622
Esp3I CGTCTC 1 cut(s) 42
FaeI CATG 7 cut(s) 256, 377, 826, 854, 1124, 1549, 1846
FalI AAGNNNNNCTT 2 cut(s) 875, 907
FaqI GGGAC 4 cut(s) 202, 246, 1344, 1472
FatI CATG 7 cut(s) 252, 373, 822, 850, 1120, 1545, 1842
FbaI TGATCA 3 cut(s) 42, 565, 1173
FblI GTMKAC 2 cut(s) 32, 441
FokI GGATG 5 cut(s) 244, 605, 1114, 1624, 1796
FriOI GRGCYC 1 cut(s) 1797
FspBI CTAG 6 cut(s) 1380, 1637, 1695, 1748, 1760, 1868
GlaI GCGC 2 cut(s) 149, 1209
GsaI CCCAGC 1 cut(s) 975
GsuI CTGGAG 2 cut(s) 82, 1781
HaeIII GGCC 8 cut(s) 123, 496, 559, 847, 890, 1170, 1358, 1515
HapII CCGG 1 cut(s) 131
HgaI GACGC 1 cut(s) 1199
HhaI GCGC 2 cut(s) 150, 1210
Hin1II CATG 7 cut(s) 256, 377, 826, 854, 1124, 1549, 1846
Hin6I GCGC 2 cut(s) 148, 1208
HinP1I GCGC 2 cut(s) 148, 1208
HinfI GANTC 5 cut(s) 63, 627, 642, 1003, 1849
HpaII CCGG 1 cut(s) 131
HphI GGTGA 3 cut(s) 100, 803, 1232
Hpy166II GTNNAC 4 cut(s) 33, 142, 442, 1428
Hpy188I TCNGA 7 cut(s) 21, 42, 68, 262, 331, 1508, 1606
Hpy8I GTNNAC 4 cut(s) 33, 142, 442, 1428
HpyAV CCTTC 7 cut(s) 113, 115, 486, 1253, 1695, 1711, 1760
HpyCH4III ACNGT 6 cut(s) 454, 479, 782, 1244, 1335, 1775
HpyCH4IV ACGT 3 cut(s) 35, 669, 1497
HpyF10VI GCNNNNNNNGC 8 cut(s) 55, 419, 428, 962, 992, 1055, 1303, 1394
HpyF3I CTNAG 2 cut(s) 1361, 1422
HpySE526I ACGT 3 cut(s) 35, 669, 1497
Hsp92II CATG 7 cut(s) 256, 377, 826, 854, 1124, 1549, 1846
HspAI GCGC 2 cut(s) 148, 1208
KpnI GGTACC 1 cut(s) 1774
Ksp22I TGATCA 3 cut(s) 42, 565, 1173
LmnI GCTCC 2 cut(s) 983, 1800
Lsp1109I GCAGC 9 cut(s) 61, 87, 162, 661, 664, 729, 1066, 1627, 1637
LweI GCATC 4 cut(s) 1150, 1195, 1602, 1774
MaeI CTAG 6 cut(s) 1380, 1637, 1695, 1748, 1760, 1868
MaeII ACGT 3 cut(s) 35, 669, 1497
MaeIII GTNAC 4 cut(s) 586, 900, 908, 1538
MboII GAAGA 8 cut(s) 155, 218, 307, 533, 881, 1448, 1826, 1835
MfeI CAATTG 2 cut(s) 648, 966
MflI RGATCY 3 cut(s) 101, 1501, 1756
MhlI GDGCHC 4 cut(s) 997, 1430, 1527, 1797
MlsI TGGCCA 2 cut(s) 559, 1515
MluNI TGGCCA 2 cut(s) 559, 1515
MlyI GAGTC 4 cut(s) 72, 636, 1012, 1858
MmeI TCCRAC 3 cut(s) 436, 703, 1433
Mox20I TGGCCA 2 cut(s) 559, 1515
Mph1103I ATGCAT 1 cut(s) 1126
MroXI GAANNNNTTC 2 cut(s) 873, 1281
MscI TGGCCA 2 cut(s) 559, 1515
MseI TTAA 3 cut(s) 362, 894, 933
Msp20I TGGCCA 2 cut(s) 559, 1515
MspA1I CMGCKG 1 cut(s) 563
MspI CCGG 1 cut(s) 131
MspR9I CCNGG 5 cut(s) 131, 499, 632, 1535, 1560
MunI CAATTG 2 cut(s) 648, 966
MvaI CCWGG 4 cut(s) 499, 632, 1535, 1560
MvnI CGCG 2 cut(s) 1188, 1210
MwoI GCNNNNNNNGC 8 cut(s) 55, 419, 428, 962, 992, 1055, 1303, 1394
NciI CCSGG 1 cut(s) 131
NlaIII CATG 7 cut(s) 256, 377, 826, 854, 1124, 1549, 1846
NlaIV GGNNCC 3 cut(s) 727, 1591, 1772
NmuCI GTSAC 1 cut(s) 586
NsiI ATGCAT 1 cut(s) 1126
NspI RCATGY 4 cut(s) 854, 1124, 1549, 1846
PagI TCATGA 1 cut(s) 252
PaqCI CACCTGC 1 cut(s) 1034
PasI CCCWGGG 1 cut(s) 498
PciI ACATGT 2 cut(s) 1545, 1842
PdmI GAANNNNTTC 2 cut(s) 873, 1281
PfeI GAWTC 1 cut(s) 642
PflFI GACNNNGTC 1 cut(s) 780
PflMI CCANNNNNTGG 1 cut(s) 1565
PleI GAGTC 4 cut(s) 71, 635, 1011, 1857
PpsI GAGTC 4 cut(s) 71, 635, 1011, 1857
PscI ACATGT 2 cut(s) 1545, 1842
PsiI TTATAA 2 cut(s) 552, 1875
Psp124BI GAGCTC 1 cut(s) 1797
Psp6I CCWGG 4 cut(s) 497, 630, 1533, 1558
PspFI CCCAGC 1 cut(s) 971
PspGI CCWGG 4 cut(s) 497, 630, 1533, 1558
PspN4I GGNNCC 3 cut(s) 727, 1591, 1772
PspPI GGNCC 4 cut(s) 323, 495, 888, 1357
PstI CTGCAG 2 cut(s) 90, 1324
PstNI CAGNNNCTG 2 cut(s) 1049, 1730
PsuI RGATCY 3 cut(s) 101, 1501, 1756
PsyI GACNNNGTC 1 cut(s) 780
PvuII CAGCTG 1 cut(s) 563
RsaI GTAC 7 cut(s) 395, 509, 702, 952, 1550, 1576, 1772
RsaNI GTAC 7 cut(s) 394, 508, 701, 951, 1549, 1575, 1771
SacI GAGCTC 1 cut(s) 1797
SaqAI TTAA 3 cut(s) 362, 894, 933
Sau96I GGNCC 4 cut(s) 323, 495, 888, 1357
SchI GAGTC 4 cut(s) 72, 636, 1012, 1858
ScrFI CCNGG 5 cut(s) 131, 499, 632, 1535, 1560
SduI GDGCHC 4 cut(s) 997, 1430, 1527, 1797
SfaNI GCATC 4 cut(s) 1150, 1195, 1602, 1774
SfcI CTRYAG 4 cut(s) 86, 435, 1320, 1616
SinI GGWCC 1 cut(s) 323
SmlI CTYRAG 1 cut(s) 53
SmoI CTYRAG 1 cut(s) 53
SpeI ACTAGT 1 cut(s) 1867
SsiI CCGC 4 cut(s) 127, 422, 518, 848
SspI AATATT 2 cut(s) 360, 606
SspMI CTAG 6 cut(s) 1380, 1637, 1695, 1748, 1760, 1868
SstI GAGCTC 1 cut(s) 1797
StyD4I CCNGG 5 cut(s) 129, 497, 630, 1533, 1558
StyI CCWWGG 2 cut(s) 173, 622
TaaI ACNGT 6 cut(s) 454, 479, 782, 1244, 1335, 1775
TaiI ACGT 3 cut(s) 38, 672, 1500
TaqI TCGA 3 cut(s) 117, 156, 813
TatI WGTACW 2 cut(s) 393, 507
TauI GCSGC 1 cut(s) 850
TfiI GAWTC 1 cut(s) 642
Tru1I TTAA 3 cut(s) 362, 894, 933
Tru9I TTAA 3 cut(s) 362, 894, 933
TscAI CASTG 3 cut(s) 484, 1532, 1731
TseFI GTSAC 1 cut(s) 586
TseI GCWGC 9 cut(s) 49, 75, 150, 674, 677, 742, 1079, 1625, 1640
Tsp45I GTSAC 1 cut(s) 586
TspDTI ATGAA 5 cut(s) 399, 750, 811, 831, 1131
TspGWI ACGGA 2 cut(s) 605, 1099
TspRI CASTG 3 cut(s) 484, 1532, 1731
Tth111I GACNNNGTC 1 cut(s) 780
Van91I CCANNNNNTGG 1 cut(s) 1565
VneI GTGCAC 1 cut(s) 1426
VpaK11BI GGWCC 1 cut(s) 323
XagI CCTNNNNNAGG 1 cut(s) 1751
XapI RAATTY 2 cut(s) 818, 1236
XceI RCATGY 4 cut(s) 854, 1124, 1549, 1846
XcmI CCANNNNNNNNNTGG 1 cut(s) 476
XmiI GTMKAC 2 cut(s) 32, 441
XmnI GAANNNNTTC 2 cut(s) 873, 1281
XspI CTAG 6 cut(s) 1380, 1637, 1695, 1748, 1760, 1868
Zsp2I ATGCAT 1 cut(s) 1126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.