Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00747

Orthogroup ID

OG0000076

Physical Location & Seq

Genomic Coordinates Reverse (-)

3613 .. 11370

Gene Structure 7758 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G015930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGCAGCGAGTTACAAGGCCAAGAGGTGGTCTAAATGAGTGGCTTCACTGGCTCCCGGTTTCTGTTCACAAGATGGTTGGATTGCGTCGTAAGGAAGATAAAGTTGGGTCTCTACCAACAGAAAATGGTGGCAGTGCTGGGTTGAAATGTGTCTTAGAAGCTGATGTCCAGGAGATTGTAACCATGGCTTGTCGGACTTATGAAAAGGATGGACCCATACTGGTGCTAACTTGTGGCAGGGATACTATTTCCAATGTAAGTTCTATTAGACGACTAGCATCTGAAAACATCTTTGTTGTTCTGATACAACATCCCAGGTTGCATCTCAATAGATTTGACTTGGTTATTACCCCGAAACATGATTACTATCCTTTGACCCCTGAAGCACAGAAGCAGGTTCCTCAATTTCTACGTGGGTGGATAACTCCTCGTGAGCCTCCTGACAGGCATGTGGTCCTCACTATTGGAGCTTTGCATCAAATTGATGCTACTGCCCTTCGGAATGCTGCCAGTGCTTGCAATTGTAGTTATGGTGTGGACCTTGCGAAGCAATTGATAATCTATTTGCCTAGTGTTCTTCTAAGCTGTGGAAGCATCATGTATCCAATTAATTTTATAACAAAGGAGCTCGGTGGTAATCCAAAAGTTTACACTTGGGATGGTCAAGGTGATCGTATGCTGCTTCCGGGCCAAAGGTTTTGCCCTATGGAAGATGAACTACTCATGTTCTACCTTAAGCCTAAGGTGAACAGGATGAAAGTGCCCGGCAACGAAGACGTTATCTGCGAGTTGGATCTTTACGGTGACCAAGATCCTTGGAAGATATGGGAAAGATTCAAAGCAAGAAAGGCCAACGACTTGGGGAGGAACAAAGATCTCTACTTCTTCACCCAAAAGAAGAAAAAGACTGCAAAAAGCTCATGTATAAGCCGAACAGTTGGGAGTGGCGGTACTTGGAAAGGCCAGAATGCAGCCAAGGAGATCTATGTTCTTGATGATAATCAGCAGCCAACGACTACTGTTCTTGGTTTCAAGAAAACTTACACCTATAAGAACAAGGGGTCTGTGAATGATGGTCGTTGGATCATGTATGAGTTTGAACTTGTTAAGTCACAACTCGCGAACAAGAAACAAGTGAACAAGAATGACTATGTTCTTTGTTTACTTAGGAAAAACGATGTACTGCCGGAAAGAAAGAGAAAAAGGCAAGAAGAAGAGAAGAGGCTTGGAGACTATGTCGAGGACGATGACGGAGATAACACAGATCCTGAATCGGTTACTGAGGAGCCGCAAGAGAAACGGCAACGTCTTCTACCATCATTAGAAGCTGAACAAGAACAATTCTTGCAGCCAGCACCATCATTAGAATCTGAACAAGAAGCAGTACAAGATGAACCACTTCTCTTGCAAGTGGATGAGAATATGGAACTGCAGCAATTGGAGTTGGCTGAACTAGAAAAGTGGTTTGAAGTGGAATTTGAAGCAAGACCTACAACACTAGAGGCTGAACAAGTTTCCTTGCCTATTGATGAGAATTCAGGACTGCAACAATTGGAAGCTGAACCTCAACTAGGAGGAGAAAATCTGGAGCAGCAACTTGATGCACCATCATTTGCAGCTGATGAGATAATGAGTGGCTTTCAGTTTCACCCAGATGAAAATCCGGCGAAGCAAATGGGGGCTGAACCCAATGTGTATGGAGGGAACTTGAGTGACGCTATGGATGGTGAAAACTGGCCTATGTTTTTTGTGGAAGAGCTAATGAATGATGAGCAGCCAAATACCATGGATATGGGAGAGTGGAATGCCACTTTTTCTGATTTTGAGTACCTAGCATTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000266 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0006996 GO:0007005 GO:0008150 GO:0009987 GO:0016020 GO:0016043 GO:0019867 GO:0031090 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0071840 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mito_fiss_Elm1

Protein Analysis

613

Amino Acids

69.97

Weight (kDa)

4.89

Isoelectric Point (pI)

45.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mito_fiss_Elm1	PF06258	33 - 174	1.3e-27	Mitochondrial fission ELM1
NAM	PF02365	229 - 368	3.7e-24	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000076)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53610 AT1G53620
fragaria_vesca	FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica	MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica	Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis	pycom03g14030 pycom03g15340
rosa_chinensis	RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata	RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora	Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii	Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa	Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha	Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana	Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	617
Acc36I	ACCTGC	1 cut(s)	385
AccB7I	CCANNNNNTGG	1 cut(s)	26
AccII	CGCG	1 cut(s)	1121
AciI	CCGC	2 cut(s)	948, 1289
AclWI	GGATC	4 cut(s)	801, 806, 1091, 1259
AcsI	RAATTY	2 cut(s)	1475, 1534
AcuI	CTGAAG	1 cut(s)	402
AfaI	GTAC	4 cut(s)	952, 1182, 1386, 1829
AfiI	CCNNNNNNNGG	2 cut(s)	26, 1571
AflII	CTTAAG	1 cut(s)	734
AgsI	TTSAA	6 cut(s)	145, 838, 1033, 1100, 1469, 1481
AjnI	CCWGG	2 cut(s)	168, 314
AjuI	GAANNNNNNNTTGG	2 cut(s)	87, 119
AluBI	AGCT	9 cut(s)	161, 470, 585, 628, 918, 1328, 1559, 1619, 1759
AluI	AGCT	9 cut(s)	161, 470, 585, 628, 918, 1328, 1559, 1619, 1759
Alw21I	GWGCWC	1 cut(s)	630
Alw26I	GTCTC	2 cut(s)	114, 1224
AlwI	GGATC	4 cut(s)	801, 806, 1091, 1259
AlwNI	CAGNNNCTG	1 cut(s)	1268
AoxI	GGCC	5 cut(s)	17, 688, 849, 961, 1736
ApoI	RAATTY	2 cut(s)	1475, 1534
AseI	ATTAAT	1 cut(s)	609
Asp700I	GAANNNNTTC	1 cut(s)	1398
AspS9I	GGNCC	4 cut(s)	212, 454, 538, 688
AsuC2I	CCSGG	3 cut(s)	56, 687, 765
AsuHPI	GGTGA	6 cut(s)	680, 757, 815, 880, 1640, 1739
AvaII	GGWCC	3 cut(s)	212, 454, 538
AxyI	CCTNAGG	1 cut(s)	741
BaeGI	GKGCMC	1 cut(s)	765
BanII	GRGCYC	1 cut(s)	630
BarI	GAAGNNNNNNTAC	2 cut(s)	702, 734
BauI	CACGAG	1 cut(s)	429
BbsI	GAAGAC	2 cut(s)	780, 1301
Bbv12I	GWGCWC	1 cut(s)	630
BccI	CCATC	8 cut(s)	67, 203, 653, 1067, 1324, 1366, 1615, 1718
BceAI	ACGGC	1 cut(s)	1316
BciT130I	CCWGG	2 cut(s)	170, 316
BciVI	GTATCC	2 cut(s)	235, 612
BcnI	CCSGG	3 cut(s)	56, 687, 765
BcoDI	GTCTC	2 cut(s)	114, 1224
BfaI	CTAG	6 cut(s)	275, 570, 1454, 1499, 1571, 1832
BfmI	CTRYAG	1 cut(s)	1430
BfrI	CTTAAG	1 cut(s)	734
BfuAI	ACCTGC	1 cut(s)	385
BfuI	GTATCC	2 cut(s)	235, 612
BglII	AGATCT	2 cut(s)	874, 981
Bme1390I	CCNGG	5 cut(s)	56, 170, 316, 687, 765
Bme18I	GGWCC	3 cut(s)	212, 454, 538
BmgT120I	GGNCC	4 cut(s)	212, 454, 538, 688
BmiI	GGNNCC	4 cut(s)	53, 214, 399, 1287
BmrFI	CCNGG	5 cut(s)	56, 170, 316, 687, 765
BmsI	GCATC	6 cut(s)	287, 331, 475, 484, 603, 1591
BpiI	GAAGAC	2 cut(s)	780, 1301
BpmI	CTGGAG	1 cut(s)	1607
BpuEI	CTTGAG	1 cut(s)	1729
BpuMI	CCSGG	3 cut(s)	56, 687, 765
BsaAI	YACGTR	1 cut(s)	413
BsaBI	GATNNNNATC	3 cut(s)	366, 999, 1659
BsaI	GGTCTC	1 cut(s)	114
BsaJI	CCNNGG	5 cut(s)	183, 314, 815, 975, 1785
BsaXI	ACNNNNNCTCC	4 cut(s)	934, 964, 1221, 1251
Bsc4I	CCNNNNNNNGG	2 cut(s)	26, 1571
Bse1I	ACTGG	4 cut(s)	53, 225, 510, 1739
Bse21I	CCTNAGG	1 cut(s)	741
Bse8I	GATNNNNATC	3 cut(s)	366, 999, 1659
BseBI	CCWGG	2 cut(s)	170, 316
BseDI	CCNNGG	5 cut(s)	183, 314, 815, 975, 1785
BseGI	GGATG	6 cut(s)	214, 310, 664, 759, 1420, 1729
BseJI	GATNNNNATC	3 cut(s)	366, 999, 1659
BseLI	CCNNNNNNNGG	2 cut(s)	26, 1571
BseMII	CTCAG	1 cut(s)	1272
BseNI	ACTGG	4 cut(s)	53, 225, 510, 1739
BseRI	GAGGAG	3 cut(s)	417, 1298, 1590
BseSI	GKGCMC	1 cut(s)	765
BseYI	CCCAGC	1 cut(s)	137
Bsh1236I	CGCG	1 cut(s)	1121
BshFI	GGCC	5 cut(s)	19, 690, 851, 963, 1738
BsiHKAI	GWGCWC	1 cut(s)	630
BsiSI	CCGG	5 cut(s)	56, 686, 765, 1187, 1664
BslI	CCNNNNNNNGG	2 cut(s)	26, 1571
BsmAI	GTCTC	2 cut(s)	114, 1224
BsmI	GAATGC	3 cut(s)	508, 973, 1810
BsnI	GGCC	5 cut(s)	19, 690, 851, 963, 1738
Bso31I	GGTCTC	1 cut(s)	114
Bsp1286I	GDGCHC	2 cut(s)	630, 765
Bsp143I	GATC	7 cut(s)	670, 793, 811, 874, 981, 1083, 1264
Bsp19I	CCATGG	2 cut(s)	183, 1785
Bsp68I	TCGCGA	1 cut(s)	1121
BspACI	CCGC	2 cut(s)	948, 1289
BspANI	GGCC	5 cut(s)	19, 690, 851, 963, 1738
BspCNI	CTCAG	1 cut(s)	1273
BspFNI	CGCG	1 cut(s)	1121
BspLI	GGNNCC	4 cut(s)	53, 214, 399, 1287
BspMAI	CTGCAG	1 cut(s)	1434
BspMI	ACCTGC	1 cut(s)	385
BspPI	GGATC	4 cut(s)	801, 806, 1091, 1259
BspQI	GCTCTTC	1 cut(s)	1749
BspTI	CTTAAG	1 cut(s)	734
BspTNI	GGTCTC	1 cut(s)	114
BsrI	ACTGG	4 cut(s)	53, 225, 510, 1739
BssECI	CCNNGG	5 cut(s)	183, 314, 815, 975, 1785
BssMI	GATC	7 cut(s)	670, 793, 811, 874, 981, 1083, 1264
BssSI	CACGAG	1 cut(s)	429
BssT1I	CCWWGG	4 cut(s)	183, 815, 975, 1785
Bst2BI	CACGAG	1 cut(s)	429
Bst2UI	CCWGG	2 cut(s)	170, 316
Bst4CI	ACNGT	3 cut(s)	803, 937, 1021
Bst6I	CTCTTC	3 cut(s)	1209, 1214, 1749
BstAFI	CTTAAG	1 cut(s)	734
BstBAI	YACGTR	1 cut(s)	413
BstC8I	GCNNGC	2 cut(s)	517, 1353
BstDEI	CTNAG	5 cut(s)	154, 581, 741, 1166, 1281
BstDSI	CCRYGG	2 cut(s)	183, 1785
BstEII	GGTNACC	1 cut(s)	803
BstENI	CCTNNNNNAGG	1 cut(s)	1569
BstF5I	GGATG	6 cut(s)	214, 310, 664, 759, 1420, 1729
BstFNI	CGCG	1 cut(s)	1121
BstKTI	GATC	7 cut(s)	673, 796, 814, 877, 984, 1086, 1267
BstMAI	GTCTC	2 cut(s)	114, 1224
BstMBI	GATC	7 cut(s)	670, 793, 811, 874, 981, 1083, 1264
BstMWI	GCNNNNNNNGC	4 cut(s)	49, 512, 591, 848
BstNI	CCWGG	2 cut(s)	170, 316
BstNSI	RCATGY	1 cut(s)	452
BstPI	GGTNACC	1 cut(s)	803
BstSCI	CCNGG	5 cut(s)	54, 168, 314, 685, 763
BstSFI	CTRYAG	1 cut(s)	1430
BstSLI	GKGCMC	1 cut(s)	765
BstUI	CGCG	1 cut(s)	1121
BstV2I	GAAGAC	2 cut(s)	780, 1301
BstX2I	RGATCY	5 cut(s)	793, 811, 874, 981, 1264
BstXI	CCANNNNNNTGG	2 cut(s)	859, 1792
BstYI	RGATCY	5 cut(s)	793, 811, 874, 981, 1264
Bsu36I	CCTNAGG	1 cut(s)	741
BsuI	GTATCC	2 cut(s)	235, 612
BsuRI	GGCC	5 cut(s)	19, 690, 851, 963, 1738
BtgI	CCRYGG	2 cut(s)	183, 1785
BtsCI	GGATG	6 cut(s)	214, 310, 664, 759, 1420, 1729
BtsI	GCAGTG	1 cut(s)	139
BtsIMutI	CAGTG	3 cut(s)	46, 139, 517
BtuMI	TCGCGA	1 cut(s)	1121
BveI	ACCTGC	1 cut(s)	385
Cac8I	GCNNGC	2 cut(s)	517, 1353
CaiI	CAGNNNCTG	1 cut(s)	1268
Cfr13I	GGNCC	4 cut(s)	212, 454, 538, 688
CseI	GACGC	2 cut(s)	74, 1724
Csp6I	GTAC	4 cut(s)	951, 1181, 1385, 1828
CspCI	CAANNNNNGTGG	2 cut(s)	1386, 1421
CviAII	CATG	8 cut(s)	184, 359, 449, 598, 724, 921, 1087, 1786
CviQI	GTAC	4 cut(s)	951, 1181, 1385, 1828
DdeI	CTNAG	5 cut(s)	154, 581, 741, 1166, 1281
DpnI	GATC	7 cut(s)	672, 795, 813, 876, 983, 1085, 1266
DpnII	GATC	7 cut(s)	670, 793, 811, 874, 981, 1083, 1264
Eam1104I	CTCTTC	3 cut(s)	1209, 1214, 1749
EarI	CTCTTC	3 cut(s)	1209, 1214, 1749
Ecl136II	GAGCTC	1 cut(s)	628
Eco130I	CCWWGG	4 cut(s)	183, 815, 975, 1785
Eco24I	GRGCYC	1 cut(s)	630
Eco31I	GGTCTC	1 cut(s)	114
Eco47I	GGWCC	3 cut(s)	212, 454, 538
Eco53kI	GAGCTC	1 cut(s)	628
Eco57I	CTGAAG	1 cut(s)	402
Eco81I	CCTNAGG	1 cut(s)	741
Eco91I	GGTNACC	1 cut(s)	803
EcoICRI	GAGCTC	1 cut(s)	628
EcoNI	CCTNNNNNAGG	1 cut(s)	1569
EcoO65I	GGTNACC	1 cut(s)	803
EcoRI	GAATTC	1 cut(s)	1534
EcoRII	CCWGG	2 cut(s)	168, 314
EcoT14I	CCWWGG	4 cut(s)	183, 815, 975, 1785
EcoT38I	GRGCYC	1 cut(s)	630
ErhI	CCWWGG	4 cut(s)	183, 815, 975, 1785
FaeI	CATG	8 cut(s)	187, 362, 452, 601, 727, 924, 1090, 1789
FatI	CATG	8 cut(s)	183, 358, 448, 597, 723, 920, 1086, 1785
FokI	GGATG	6 cut(s)	221, 297, 671, 766, 1427, 1736
FriOI	GRGCYC	1 cut(s)	630
FspBI	CTAG	6 cut(s)	275, 570, 1454, 1499, 1571, 1832
GsaI	CCCAGC	1 cut(s)	141
GsuI	CTGGAG	1 cut(s)	1607
HaeIII	GGCC	5 cut(s)	19, 690, 851, 963, 1738
HapII	CCGG	5 cut(s)	56, 686, 765, 1187, 1664
HgaI	GACGC	2 cut(s)	74, 1724
Hin1II	CATG	8 cut(s)	187, 362, 452, 601, 727, 924, 1090, 1789
HinfI	GANTC	3 cut(s)	834, 1271, 1367
HpaII	CCGG	5 cut(s)	56, 686, 765, 1187, 1664
HphI	GGTGA	6 cut(s)	680, 757, 815, 880, 1640, 1739
Hpy166II	GTNNAC	6 cut(s)	67, 538, 649, 748, 1138, 1163
Hpy188I	TCNGA	6 cut(s)	195, 283, 303, 501, 1372, 1819
Hpy188III	TCNNGA	8 cut(s)	431, 440, 992, 1033, 1120, 1268, 1539, 1586
Hpy8I	GTNNAC	6 cut(s)	67, 538, 649, 748, 1138, 1163
Hpy99I	CGWCG	1 cut(s)	90
HpyAV	CCTTC	1 cut(s)	506
HpyCH4III	ACNGT	3 cut(s)	803, 937, 1021
HpyCH4IV	ACGT	3 cut(s)	412, 777, 1306
HpyF10VI	GCNNNNNNNGC	4 cut(s)	49, 512, 591, 848
HpyF3I	CTNAG	5 cut(s)	154, 581, 741, 1166, 1281
HpySE526I	ACGT	3 cut(s)	412, 777, 1306
Hsp92II	CATG	8 cut(s)	187, 362, 452, 601, 727, 924, 1090, 1789
Kzo9I	GATC	7 cut(s)	670, 793, 811, 874, 981, 1083, 1264
LguI	GCTCTTC	1 cut(s)	1749
LmnI	GCTCC	5 cut(s)	57, 467, 625, 1285, 1588
LweI	GCATC	6 cut(s)	287, 331, 475, 484, 603, 1591
MaeI	CTAG	6 cut(s)	275, 570, 1454, 1499, 1571, 1832
MaeII	ACGT	3 cut(s)	412, 777, 1306
MaeIII	GTNAC	6 cut(s)	10, 178, 803, 1110, 1276, 1712
MalI	GATC	7 cut(s)	672, 795, 813, 876, 983, 1085, 1266
MboI	GATC	7 cut(s)	670, 793, 811, 874, 981, 1083, 1264
MfeI	CAATTG	4 cut(s)	520, 551, 1436, 1550
MflI	RGATCY	5 cut(s)	793, 811, 874, 981, 1264
MhlI	GDGCHC	2 cut(s)	630, 765
MmeI	TCCRAC	4 cut(s)	58, 173, 771, 1061
MroXI	GAANNNNTTC	1 cut(s)	1398
MseI	TTAA	3 cut(s)	609, 735, 1107
MslI	CAYNNNNRTG	3 cut(s)	221, 1653, 1790
MspA1I	CMGCKG	1 cut(s)	1619
MspCI	CTTAAG	1 cut(s)	734
MspI	CCGG	5 cut(s)	56, 686, 765, 1187, 1664
MspR9I	CCNGG	5 cut(s)	56, 170, 316, 687, 765
MunI	CAATTG	4 cut(s)	520, 551, 1436, 1550
Mva1269I	GAATGC	3 cut(s)	508, 973, 1810
MvaI	CCWGG	2 cut(s)	170, 316
MvnI	CGCG	1 cut(s)	1121
MwoI	GCNNNNNNNGC	4 cut(s)	49, 512, 591, 848
NciI	CCSGG	3 cut(s)	56, 687, 765
NcoI	CCATGG	2 cut(s)	183, 1785
NdeII	GATC	7 cut(s)	670, 793, 811, 874, 981, 1083, 1264
NlaIII	CATG	8 cut(s)	187, 362, 452, 601, 727, 924, 1090, 1789
NlaIV	GGNNCC	4 cut(s)	53, 214, 399, 1287
NmuCI	GTSAC	3 cut(s)	803, 1110, 1712
NruI	TCGCGA	1 cut(s)	1121
NspI	RCATGY	1 cut(s)	452
PciSI	GCTCTTC	1 cut(s)	1749
PcsI	WCGNNNNNNNCGW	1 cut(s)	783
PctI	GAATGC	3 cut(s)	508, 973, 1810
PdmI	GAANNNNTTC	1 cut(s)	1398
PfeI	GAWTC	3 cut(s)	834, 1271, 1367
PflFI	GACNNNGTC	1 cut(s)	1235
PflMI	CCANNNNNTGG	1 cut(s)	26
PfoI	TCCNGGA	1 cut(s)	168
Ppu21I	YACGTR	1 cut(s)	413
PshBI	ATTAAT	1 cut(s)	609
PsiI	TTATAA	1 cut(s)	617
Psp124BI	GAGCTC	1 cut(s)	630
Psp6I	CCWGG	2 cut(s)	168, 314
PspEI	GGTNACC	1 cut(s)	803
PspFI	CCCAGC	1 cut(s)	137
PspGI	CCWGG	2 cut(s)	168, 314
PspN4I	GGNNCC	4 cut(s)	53, 214, 399, 1287
PspPI	GGNCC	4 cut(s)	212, 454, 538, 688
PstI	CTGCAG	1 cut(s)	1434
PstNI	CAGNNNCTG	1 cut(s)	1268
PsuI	RGATCY	5 cut(s)	793, 811, 874, 981, 1264
PsyI	GACNNNGTC	1 cut(s)	1235
PvuII	CAGCTG	1 cut(s)	1619
RruI	TCGCGA	1 cut(s)	1121
RsaI	GTAC	4 cut(s)	952, 1182, 1386, 1829
RsaNI	GTAC	4 cut(s)	951, 1181, 1385, 1828
RseI	CAYNNNNRTG	3 cut(s)	221, 1653, 1790
SacI	GAGCTC	1 cut(s)	630
SapI	GCTCTTC	1 cut(s)	1749
SaqAI	TTAA	3 cut(s)	609, 735, 1107
Sau3AI	GATC	7 cut(s)	670, 793, 811, 874, 981, 1083, 1264
Sau96I	GGNCC	4 cut(s)	212, 454, 538, 688
ScrFI	CCNGG	5 cut(s)	56, 170, 316, 687, 765
SduI	GDGCHC	2 cut(s)	630, 765
SfaNI	GCATC	6 cut(s)	287, 331, 475, 484, 603, 1591
SfcI	CTRYAG	1 cut(s)	1430
SinI	GGWCC	3 cut(s)	212, 454, 538
SmiMI	CAYNNNNRTG	3 cut(s)	221, 1653, 1790
SmlI	CTYRAG	2 cut(s)	734, 1708
SmoI	CTYRAG	2 cut(s)	734, 1708
SsiI	CCGC	2 cut(s)	948, 1289
SspMI	CTAG	6 cut(s)	275, 570, 1454, 1499, 1571, 1832
SstI	GAGCTC	1 cut(s)	630
StyD4I	CCNGG	5 cut(s)	54, 168, 314, 685, 763
StyI	CCWWGG	4 cut(s)	183, 815, 975, 1785
TaaI	ACNGT	3 cut(s)	803, 937, 1021
TaiI	ACGT	3 cut(s)	415, 780, 1309
TaqI	TCGA	1 cut(s)	1239
TatI	WGTACW	2 cut(s)	1180, 1384
TauI	GCSGC	1 cut(s)	1291
TfiI	GAWTC	3 cut(s)	834, 1271, 1367
Tru1I	TTAA	3 cut(s)	609, 735, 1107
Tru9I	TTAA	3 cut(s)	609, 735, 1107
TscAI	CASTG	3 cut(s)	53, 139, 517
TseFI	GTSAC	3 cut(s)	803, 1110, 1712
Tsp45I	GTSAC	3 cut(s)	803, 1110, 1712
TspDTI	ATGAA	6 cut(s)	216, 729, 770, 1407, 1671, 1778
TspGWI	ACGGA	1 cut(s)	1266
TspRI	CASTG	3 cut(s)	53, 139, 517
Tth111I	GACNNNGTC	1 cut(s)	1235
Van91I	CCANNNNNTGG	1 cut(s)	26
Vha464I	CTTAAG	1 cut(s)	734
VpaK11BI	GGWCC	3 cut(s)	212, 454, 538
VspI	ATTAAT	1 cut(s)	609
XagI	CCTNNNNNAGG	1 cut(s)	1569
XapI	RAATTY	2 cut(s)	1475, 1534
XceI	RCATGY	1 cut(s)	452
XmnI	GAANNNNTTC	1 cut(s)	1398
XspI	CTAG	6 cut(s)	275, 570, 1454, 1499, 1571, 1832

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.