Rh5DG328300
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000076
Physical Location & Seq
Forward (+)
43183050 .. 43184426
1377 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG328300.1

Sequence Viewer

Length: 1182 bp
ATGGAGGGTGGTCGTATGCTTCTTCCAGGCCAAAGGTTTTGCCCCATCGAAGATGAACTACTCATGTTCTACCTTAAGCCTAAGGTGAGCGGGATGGAAGTGCCCGGCAACGACGACATTATCTGCGAGTTGGATCTTTACGGTGACAACGATCCTTGGAAGATATGGGAAAGAGTCGAAGTAAGAAAGGCCAACGACTTGAGGAGGAACAAAGATCTCTACTTCACCCAAAAGAAGAAAAAGACTGCAAAAAGCTCACGTATAAGCCGAACTGTTGGGAGTGGCGGTACTTGGAAAGGCCAGAATGCAGCCAAGGAGATCTATCTTCTTGATGATAATCAGCAGCCAACGACTACTCTTCTTGGTTTCAAGAAAACCTACACCTATAAGAACAAGGGGTCTGTGCATGATGGTCGCTGGATCATGTATGAGTTTGAACTTGATAAGTCACAACTCGTGCACAAGAAACAAGTAAACAAGAATGACTATGTTCTTTGTTTACTTAGGAAAAACGATGTACTGCCGGAAAGAAAGAGAAAAAGGCAAGAAGAAGAGGAGATGCTTGGAGACTATGTCGAGGACCATGACAGAGATAACACAGATCCTGAATCGGTTACTGAGGAGCCGCAAGAGAAACGGCAACGTCTTCTACCATCATTAGAAGCTGAACAAGAACAATTCTTGCAGCCAGCACCATCATTAGAATCTGAACAAGAAGCAGTACAAGATGAACCACTTCTCTTGCAAGTGGATGAGAATATGGAACTGCAGCAATCGGAGTTGGCTGAACTAGAAAAGTGGTTTGAAGTGGAATTTGAAGCAAGACCTACAACACTAGAGGCTGAACAAGTTTCCTTGCCTGTTGATGAGAATTCAGGACTGCAACAATTGGAAGCTGAACCTCAACTAGGAGGAGAAAATCTGGAGCAGCAACTTGATGCACCATCGACATTTGCAGCTGATGAGATAATGAGTGGCTTTCAGTTTCACCCAGATGAAAATCCGGCGAAGCAAATGGGGGCTGAACCCAATGTGTATGGAGGGAACTTGAGTGACGCTATGAATGGTGAAAACTGGCCTATGTTTTTTGTGGAAGAGCTAATGAATGATGAGCAGCCAAATACCATGGAAATGGGAGAGTGGAATGCCACTTTTTCTGATTTTGAGTACTTAGCATTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

393

Amino Acids

45.47

Weight (kDa)

4.47

Isoelectric Point (pI)

52.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 9 - 147 1.1e-22 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 90
AciI CCGC 3 cut(s) 90, 285, 626
AclWI GGATC 4 cut(s) 141, 146, 428, 596
AcsI RAATTY 2 cut(s) 812, 871
AfaI GTAC 4 cut(s) 289, 519, 723, 1169
AfiI CCNNNNNNNGG 1 cut(s) 908
AflII CTTAAG 1 cut(s) 74
AgsI TTSAA 4 cut(s) 370, 437, 806, 818
AjnI CCWGG 1 cut(s) 25
AluBI AGCT 5 cut(s) 255, 665, 896, 959, 1099
AluI AGCT 5 cut(s) 255, 665, 896, 959, 1099
Alw21I GWGCWC 1 cut(s) 462
Alw26I GTCTC 1 cut(s) 561
Alw44I GTGCAC 1 cut(s) 458
AlwI GGATC 4 cut(s) 141, 146, 428, 596
AlwNI CAGNNNCTG 1 cut(s) 605
AoxI GGCC 4 cut(s) 28, 189, 298, 1076
ApaLI GTGCAC 1 cut(s) 458
ApeKI GCWGC 7 cut(s) 308, 343, 685, 769, 928, 956, 1114
ApoI RAATTY 2 cut(s) 812, 871
Asp700I GAANNNNTTC 1 cut(s) 735
AspS9I GGNCC 1 cut(s) 580
AsuC2I CCSGG 1 cut(s) 105
AsuHPI GGTGA 5 cut(s) 97, 155, 217, 980, 1079
AvaII GGWCC 1 cut(s) 580
AxyI CCTNAGG 1 cut(s) 81
BaeGI GKGCMC 2 cut(s) 105, 462
BarI GAAGNNNNNNTAC 2 cut(s) 42, 74
BauI CACGAG 1 cut(s) 455
BbsI GAAGAC 1 cut(s) 638
Bbv12I GWGCWC 1 cut(s) 462
BbvI GCAGC 7 cut(s) 320, 355, 697, 781, 940, 968, 1126
BccI CCATC 6 cut(s) 53, 88, 404, 661, 703, 952
BceAI ACGGC 1 cut(s) 653
BcgI CGANNNNNNTGC 2 cut(s) 395, 429
BciT130I CCWGG 1 cut(s) 27
BcnI CCSGG 1 cut(s) 105
BcoDI GTCTC 1 cut(s) 561
BfaI CTAG 3 cut(s) 791, 836, 908
BfmI CTRYAG 1 cut(s) 767
BfrI CTTAAG 1 cut(s) 74
BglII AGATCT 2 cut(s) 214, 318
BisI GCNGC 8 cut(s) 309, 344, 626, 686, 770, 929, 957, 1115
BlsI GCNGC 8 cut(s) 310, 345, 627, 687, 771, 930, 958, 1116
BmcAI AGTACT 1 cut(s) 1169
Bme1390I CCNGG 2 cut(s) 27, 105
Bme18I GGWCC 1 cut(s) 580
BmgT120I GGNCC 1 cut(s) 580
BmiI GGNNCC 1 cut(s) 624
BmrFI CCNGG 2 cut(s) 27, 105
BmsI GCATC 2 cut(s) 549, 928
BpiI GAAGAC 1 cut(s) 638
BpmI CTGGAG 1 cut(s) 944
BpuEI CTTGAG 2 cut(s) 220, 1069
BpuMI CCSGG 1 cut(s) 105
BsaAI YACGTR 1 cut(s) 260
BsaBI GATNNNNATC 2 cut(s) 336, 999
BsaJI CCNNGG 3 cut(s) 155, 312, 1125
BsaXI ACNNNNNCTCC 4 cut(s) 271, 301, 558, 588
Bsc4I CCNNNNNNNGG 1 cut(s) 908
Bse1I ACTGG 1 cut(s) 1079
Bse21I CCTNAGG 1 cut(s) 81
Bse8I GATNNNNATC 2 cut(s) 336, 999
BseBI CCWGG 1 cut(s) 27
BseDI CCNNGG 3 cut(s) 155, 312, 1125
BseGI GGATG 2 cut(s) 99, 757
BseJI GATNNNNATC 2 cut(s) 336, 999
BseLI CCNNNNNNNGG 1 cut(s) 908
BseMII CTCAG 1 cut(s) 609
BseNI ACTGG 1 cut(s) 1079
BseRI GAGGAG 4 cut(s) 217, 569, 635, 927
BseSI GKGCMC 2 cut(s) 105, 462
BseXI GCAGC 7 cut(s) 320, 355, 697, 781, 940, 968, 1126
BshFI GGCC 4 cut(s) 30, 191, 300, 1078
BsiHKAI GWGCWC 1 cut(s) 462
BsiSI CCGG 3 cut(s) 105, 524, 1004
BslI CCNNNNNNNGG 1 cut(s) 908
BsmAI GTCTC 1 cut(s) 561
BsmI GAATGC 2 cut(s) 310, 1150
BsnI GGCC 4 cut(s) 30, 191, 300, 1078
Bsp1286I GDGCHC 2 cut(s) 105, 462
Bsp143I GATC 6 cut(s) 133, 151, 214, 318, 420, 601
Bsp19I CCATGG 1 cut(s) 1125
BspACI CCGC 3 cut(s) 90, 285, 626
BspANI GGCC 4 cut(s) 30, 191, 300, 1078
BspCNI CTCAG 1 cut(s) 610
BspLI GGNNCC 1 cut(s) 624
BspMAI CTGCAG 1 cut(s) 771
BspPI GGATC 4 cut(s) 141, 146, 428, 596
BspQI GCTCTTC 1 cut(s) 1089
BspTI CTTAAG 1 cut(s) 74
BsrBI CCGCTC 1 cut(s) 90
BsrI ACTGG 1 cut(s) 1079
BssECI CCNNGG 3 cut(s) 155, 312, 1125
BssMI GATC 6 cut(s) 133, 151, 214, 318, 420, 601
BssSI CACGAG 1 cut(s) 455
BssT1I CCWWGG 3 cut(s) 155, 312, 1125
Bst2BI CACGAG 1 cut(s) 455
Bst2UI CCWGG 1 cut(s) 27
Bst4CI ACNGT 2 cut(s) 143, 274
Bst6I CTCTTC 3 cut(s) 363, 546, 1089
BstAFI CTTAAG 1 cut(s) 74
BstBAI YACGTR 1 cut(s) 260
BstC8I GCNNGC 1 cut(s) 690
BstDEI CTNAG 4 cut(s) 81, 503, 618, 1171
BstDSI CCRYGG 1 cut(s) 1125
BstENI CCTNNNNNAGG 1 cut(s) 906
BstF5I GGATG 2 cut(s) 99, 757
BstKTI GATC 6 cut(s) 136, 154, 217, 321, 423, 604
BstMAI GTCTC 1 cut(s) 561
BstMBI GATC 6 cut(s) 133, 151, 214, 318, 420, 601
BstNI CCWGG 1 cut(s) 27
BstSCI CCNGG 2 cut(s) 25, 103
BstSFI CTRYAG 1 cut(s) 767
BstSLI GKGCMC 2 cut(s) 105, 462
BstV1I GCAGC 7 cut(s) 320, 355, 697, 781, 940, 968, 1126
BstV2I GAAGAC 1 cut(s) 638
BstX2I RGATCY 4 cut(s) 133, 214, 318, 601
BstXI CCANNNNNNTGG 1 cut(s) 1132
BstYI RGATCY 4 cut(s) 133, 214, 318, 601
Bsu36I CCTNAGG 1 cut(s) 81
BsuRI GGCC 4 cut(s) 30, 191, 300, 1078
BtgI CCRYGG 1 cut(s) 1125
BtsCI GGATG 2 cut(s) 99, 757
Cac8I GCNNGC 1 cut(s) 690
CaiI CAGNNNCTG 1 cut(s) 605
Cfr13I GGNCC 1 cut(s) 580
CseI GACGC 1 cut(s) 1064
Csp6I GTAC 4 cut(s) 288, 518, 722, 1168
CspCI CAANNNNNGTGG 2 cut(s) 723, 758
CviAII CATG 5 cut(s) 64, 407, 424, 584, 1126
CviQI GTAC 4 cut(s) 288, 518, 722, 1168
DdeI CTNAG 4 cut(s) 81, 503, 618, 1171
DpnI GATC 6 cut(s) 135, 153, 216, 320, 422, 603
DpnII GATC 6 cut(s) 133, 151, 214, 318, 420, 601
Eam1104I CTCTTC 3 cut(s) 363, 546, 1089
EarI CTCTTC 3 cut(s) 363, 546, 1089
Eco130I CCWWGG 3 cut(s) 155, 312, 1125
Eco47I GGWCC 1 cut(s) 580
Eco81I CCTNAGG 1 cut(s) 81
EcoNI CCTNNNNNAGG 1 cut(s) 906
EcoRI GAATTC 1 cut(s) 871
EcoRII CCWGG 1 cut(s) 25
EcoT14I CCWWGG 3 cut(s) 155, 312, 1125
ErhI CCWWGG 3 cut(s) 155, 312, 1125
FaeI CATG 5 cut(s) 67, 410, 427, 587, 1129
FatI CATG 5 cut(s) 63, 406, 423, 583, 1125
FauI CCCGC 1 cut(s) 83
Fnu4HI GCNGC 8 cut(s) 309, 344, 626, 686, 770, 929, 957, 1115
FokI GGATG 2 cut(s) 106, 764
Fsp4HI GCNGC 8 cut(s) 309, 344, 626, 686, 770, 929, 957, 1115
FspBI CTAG 3 cut(s) 791, 836, 908
GluI GCNGC 8 cut(s) 309, 344, 626, 686, 770, 929, 957, 1115
GsuI CTGGAG 1 cut(s) 944
HaeIII GGCC 4 cut(s) 30, 191, 300, 1078
HapII CCGG 3 cut(s) 105, 524, 1004
HgaI GACGC 1 cut(s) 1064
Hin1II CATG 5 cut(s) 67, 410, 427, 587, 1129
HinfI GANTC 3 cut(s) 174, 608, 704
HpaII CCGG 3 cut(s) 105, 524, 1004
HphI GGTGA 5 cut(s) 97, 155, 217, 980, 1079
Hpy166II GTNNAC 3 cut(s) 460, 475, 500
Hpy188I TCNGA 3 cut(s) 709, 778, 1159
Hpy188III TCNNGA 5 cut(s) 329, 370, 605, 876, 923
Hpy8I GTNNAC 3 cut(s) 460, 475, 500
Hpy99I CGWCG 1 cut(s) 116
HpyCH4III ACNGT 2 cut(s) 143, 274
HpyCH4IV ACGT 2 cut(s) 259, 643
HpyF3I CTNAG 4 cut(s) 81, 503, 618, 1171
HpySE526I ACGT 2 cut(s) 259, 643
Hsp92II CATG 5 cut(s) 67, 410, 427, 587, 1129
Kzo9I GATC 6 cut(s) 133, 151, 214, 318, 420, 601
LguI GCTCTTC 1 cut(s) 1089
LmnI GCTCC 2 cut(s) 622, 925
Lsp1109I GCAGC 7 cut(s) 320, 355, 697, 781, 940, 968, 1126
LweI GCATC 2 cut(s) 549, 928
MaeI CTAG 3 cut(s) 791, 836, 908
MaeII ACGT 2 cut(s) 259, 643
MaeIII GTNAC 4 cut(s) 143, 447, 613, 1052
MalI GATC 6 cut(s) 135, 153, 216, 320, 422, 603
MbiI CCGCTC 1 cut(s) 90
MboI GATC 6 cut(s) 133, 151, 214, 318, 420, 601
MfeI CAATTG 1 cut(s) 887
MflI RGATCY 4 cut(s) 133, 214, 318, 601
MhlI GDGCHC 2 cut(s) 105, 462
MluCI AATT 4 cut(s) 677, 812, 871, 887
MlyI GAGTC 1 cut(s) 183
MmeI TCCRAC 1 cut(s) 111
MnlI CCTC 9 cut(s) 195, 198, 547, 571, 613, 832, 905, 912, 1034
MroXI GAANNNNTTC 1 cut(s) 735
MseI TTAA 1 cut(s) 75
MslI CAYNNNNRTG 2 cut(s) 993, 1130
MspA1I CMGCKG 1 cut(s) 959
MspCI CTTAAG 1 cut(s) 74
MspI CCGG 3 cut(s) 105, 524, 1004
MspR9I CCNGG 2 cut(s) 27, 105
MunI CAATTG 1 cut(s) 887
Mva1269I GAATGC 2 cut(s) 310, 1150
MvaI CCWGG 1 cut(s) 27
NciI CCSGG 1 cut(s) 105
NcoI CCATGG 1 cut(s) 1125
NdeII GATC 6 cut(s) 133, 151, 214, 318, 420, 601
NlaIII CATG 5 cut(s) 67, 410, 427, 587, 1129
NlaIV GGNNCC 1 cut(s) 624
NmuCI GTSAC 3 cut(s) 143, 447, 1052
PciSI GCTCTTC 1 cut(s) 1089
PcsI WCGNNNNNNNCGW 2 cut(s) 147, 265
PctI GAATGC 2 cut(s) 310, 1150
PdmI GAANNNNTTC 1 cut(s) 735
PfeI GAWTC 2 cut(s) 608, 704
PflFI GACNNNGTC 1 cut(s) 572
PkrI GCNGC 8 cut(s) 310, 345, 627, 687, 771, 930, 958, 1116
PleI GAGTC 1 cut(s) 182
PpsI GAGTC 1 cut(s) 182
Ppu21I YACGTR 1 cut(s) 260
Psp6I CCWGG 1 cut(s) 25
PspGI CCWGG 1 cut(s) 25
PspN4I GGNNCC 1 cut(s) 624
PspPI GGNCC 1 cut(s) 580
PstI CTGCAG 1 cut(s) 771
PstNI CAGNNNCTG 1 cut(s) 605
PsuI RGATCY 4 cut(s) 133, 214, 318, 601
PsyI GACNNNGTC 1 cut(s) 572
PvuII CAGCTG 1 cut(s) 959
RsaI GTAC 4 cut(s) 289, 519, 723, 1169
RsaNI GTAC 4 cut(s) 288, 518, 722, 1168
RseI CAYNNNNRTG 2 cut(s) 993, 1130
SapI GCTCTTC 1 cut(s) 1089
SaqAI TTAA 1 cut(s) 75
SatI GCNGC 8 cut(s) 309, 344, 626, 686, 770, 929, 957, 1115
Sau3AI GATC 6 cut(s) 133, 151, 214, 318, 420, 601
Sau96I GGNCC 1 cut(s) 580
ScaI AGTACT 1 cut(s) 1169
SchI GAGTC 1 cut(s) 183
ScrFI CCNGG 2 cut(s) 27, 105
SduI GDGCHC 2 cut(s) 105, 462
SfaNI GCATC 2 cut(s) 549, 928
SfcI CTRYAG 1 cut(s) 767
SinI GGWCC 1 cut(s) 580
SmiMI CAYNNNNRTG 2 cut(s) 993, 1130
SmlI CTYRAG 3 cut(s) 74, 199, 1048
SmoI CTYRAG 3 cut(s) 74, 199, 1048
Sse9I AATT 4 cut(s) 677, 812, 871, 887
SsiI CCGC 3 cut(s) 90, 285, 626
SspMI CTAG 3 cut(s) 791, 836, 908
StyD4I CCNGG 2 cut(s) 25, 103
StyI CCWWGG 3 cut(s) 155, 312, 1125
TaaI ACNGT 2 cut(s) 143, 274
TaiI ACGT 2 cut(s) 262, 646
TaqI TCGA 4 cut(s) 48, 177, 576, 947
TasI AATT 4 cut(s) 677, 812, 871, 887
TatI WGTACW 3 cut(s) 517, 721, 1167
TauI GCSGC 1 cut(s) 628
TfiI GAWTC 2 cut(s) 608, 704
Tru1I TTAA 1 cut(s) 75
Tru9I TTAA 1 cut(s) 75
TseFI GTSAC 3 cut(s) 143, 447, 1052
TseI GCWGC 7 cut(s) 308, 343, 685, 769, 928, 956, 1114
Tsp45I GTSAC 3 cut(s) 143, 447, 1052
TspDTI ATGAA 5 cut(s) 69, 744, 1011, 1076, 1118
Tth111I GACNNNGTC 1 cut(s) 572
Vha464I CTTAAG 1 cut(s) 74
VneI GTGCAC 1 cut(s) 458
VpaK11BI GGWCC 1 cut(s) 580
XagI CCTNNNNNAGG 1 cut(s) 906
XapI RAATTY 2 cut(s) 812, 871
XmnI GAANNNNTTC 1 cut(s) 735
XspI CTAG 3 cut(s) 791, 836, 908
ZrmI AGTACT 1 cut(s) 1169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.