Rroxscaffold_1G00049660
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000076
Physical Location & Seq
Forward (+)
70018939 .. 70020752
1814 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00049660.1

Sequence Viewer

Length: 1200 bp
ATGGGACATGTACAAAGAAAGAAGAAAGAACGACTTGAGGTTCAACAAAGATCTCTACTTCTTCACTCAACGAAAGAAGATGACTGTGAATGCCTCCCGGAAGGGCCGATCTATCGGAAGCGGCACCTGGAAAGGGGGGACGCTGCCAAGAACGTATACGCAAGTGGCATTGTTGTAGGTTACAGGAAAAGATTTACTTATGAGAAAAAGGGGTCTGAGCAGCATGGCAGATGGATCATGCTCGAGTTCGAACTTGATCACTCGCAAGTAGGCATGCTTGACGAACAAGACGCACAAAAATATGTTCTATGCATACTTAGGAAAAATGAGGGATCCAAAGAGAAAAGAAAACGGGTTGATGATGATGACCGGGAGAAGCTTGCAACCGGAGATGATGTCCCCGATGATTGTCCAGCACTGGATGGATATAAGAATGTGAAACAAGAGGAATCCGAAATTAAACTAGGAGAGGAAGATCAACCTATGCATGCAACCGGAGACGATATCGGCGATGCTGGTCCATCATTATCTTCTGAACTGCAAGGGGAAGAAAACTGTTGGGTGCAATACCTGAGCCCTATATTATTAGTTCACGATGACTTGCCACCATATGCAGATGCCTTGCAGTGGGAAGAAGAAAATTATTTGGGTAAACAATCCTCTGTGCCAGGCTTCGAGGACAATGTGCAACCATTTCTAGCAGCTGATCATGAACTGCAAAGGAAAGCGGAAAATTGCGGAAAGCAATGCCTAGAACATAGGCCATTGGTGCCACCATTTACAGCTGATTGCGAAATAATGATCGACATGCTAGGGGCAGAGAATTATTTGTCGAAACAGTGCCCTGTGCAATGCATCTACTGTGACTATGACGTACAACCAATTGCAGCAGCTAACGAACTGAGTAATATCTACATGTTGGGGGAAGAGCATCCTGTACCAAGAGTAGCTGAACAAGAGGGTAGTAGCTTGAAAGAGAAACAAAATGCAAGCATGGTCAGTACTTCAACTGACCATCAGCCTGACATGGTTGCCTCGAAAAGTACTTCAACTGATCATAATCGAGCTGATGATCCTATAGGAAGCAACGATGTTGATGAAGGGTTGGCTGCAGGTACTCATGGTTTCAAATATAACCCTTGGATGCTATCTTTTGCAGAGGAGCTGCTACGTGGGGCTCGATCAAAATCTAAGGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

399

Amino Acids

44.97

Weight (kDa)

4.86

Isoelectric Point (pI)

50.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1103
AccB1I GGYRCC 2 cut(s) 123, 769
AccI GTMKAC 1 cut(s) 156
AciI CCGC 3 cut(s) 121, 728, 738
AclWI GGATC 4 cut(s) 242, 327, 340, 1067
AfaI GTAC 6 cut(s) 12, 876, 939, 1003, 1045, 1117
AfiI CCNNNNNNNGG 2 cut(s) 133, 627
AflIII ACRYGT 2 cut(s) 7, 915
AgsI TTSAA 5 cut(s) 44, 973, 1008, 1050, 1129
AjnI CCWGG 2 cut(s) 126, 667
AluBI AGCT 8 cut(s) 379, 704, 785, 893, 950, 969, 1067, 1165
AluI AGCT 8 cut(s) 379, 704, 785, 893, 950, 969, 1067, 1165
Alw26I GTCTC 1 cut(s) 492
AlwI GGATC 4 cut(s) 242, 327, 340, 1067
Ama87I CYCGRG 1 cut(s) 242
AoxI GGCC 2 cut(s) 104, 761
ApeKI GCWGC 7 cut(s) 143, 220, 701, 887, 890, 1109, 1165
AspS9I GGNCC 2 cut(s) 104, 518
AsuC2I CCSGG 2 cut(s) 98, 371
AsuII TTCGAA 1 cut(s) 249
AvaI CYCGRG 1 cut(s) 242
AvaII GGWCC 1 cut(s) 518
BaeGI GKGCMC 1 cut(s) 845
BamHI GGATCC 1 cut(s) 332
BanI GGYRCC 2 cut(s) 123, 769
BanII GRGCYC 2 cut(s) 578, 1180
BbvI GCAGC 7 cut(s) 130, 232, 713, 899, 902, 1096, 1152
BccI CCATC 4 cut(s) 225, 416, 529, 1023
BciT130I CCWGG 2 cut(s) 128, 669
BclI TGATCA 3 cut(s) 256, 706, 1054
BcnI CCSGG 2 cut(s) 98, 371
BcoDI GTCTC 1 cut(s) 492
BfaI CTAG 4 cut(s) 464, 698, 752, 812
BfmI CTRYAG 2 cut(s) 1077, 1110
BfuAI ACCTGC 1 cut(s) 1103
BglII AGATCT 1 cut(s) 50
BisI GCNGC 8 cut(s) 122, 144, 221, 702, 888, 891, 1110, 1166
BlsI GCNGC 8 cut(s) 123, 145, 222, 703, 889, 892, 1111, 1167
BmcAI AGTACT 2 cut(s) 1003, 1045
Bme1390I CCNGG 4 cut(s) 98, 128, 371, 669
Bme18I GGWCC 1 cut(s) 518
BmeT110I CYCGRG 1 cut(s) 242
BmgT120I GGNCC 2 cut(s) 104, 518
BmiI GGNNCC 3 cut(s) 125, 334, 771
BmrFI CCNGG 4 cut(s) 98, 128, 371, 669
BmsI GCATC 5 cut(s) 502, 607, 864, 940, 1134
Bpu10I CCTNAGC 1 cut(s) 572
Bpu14I TTCGAA 1 cut(s) 249
BpuEI CTTGAG 1 cut(s) 56
BpuMI CCSGG 2 cut(s) 98, 371
BsaAI YACGTR 1 cut(s) 1172
BsaBI GATNNNNATC 2 cut(s) 1059, 1186
BsaJI CCNNGG 1 cut(s) 1139
BsaWI WCCGGW 2 cut(s) 386, 494
BsaXI ACNNNNNCTCC 2 cut(s) 381, 411
Bsc4I CCNNNNNNNGG 2 cut(s) 133, 627
Bse1I ACTGG 1 cut(s) 423
Bse3DI GCAATG 2 cut(s) 752, 857
Bse8I GATNNNNATC 2 cut(s) 1059, 1186
BseBI CCWGG 2 cut(s) 128, 669
BseDI CCNNGG 1 cut(s) 1139
BseGI GGATG 3 cut(s) 427, 931, 1149
BseJI GATNNNNATC 2 cut(s) 1059, 1186
BseLI CCNNNNNNNGG 2 cut(s) 133, 627
BseMI GCAATG 2 cut(s) 752, 857
BseMII CTCAG 3 cut(s) 207, 563, 893
BseNI ACTGG 1 cut(s) 423
BseRI GAGGAG 1 cut(s) 1175
BseSI GKGCMC 1 cut(s) 845
BseXI GCAGC 7 cut(s) 130, 232, 713, 899, 902, 1096, 1152
BshFI GGCC 2 cut(s) 106, 763
BshNI GGYRCC 2 cut(s) 123, 769
BsiHKCI CYCGRG 1 cut(s) 242
BsiSI CCGG 4 cut(s) 98, 370, 387, 495
BslFI GGGAC 3 cut(s) 18, 152, 383
BslI CCNNNNNNNGG 2 cut(s) 133, 627
BsmAI GTCTC 1 cut(s) 492
BsmBI CGTCTC 1 cut(s) 492
BsmFI GGGAC 3 cut(s) 18, 152, 383
BsmI GAATGC 1 cut(s) 95
BsnI GGCC 2 cut(s) 106, 763
BsoBI CYCGRG 1 cut(s) 242
Bsp119I TTCGAA 1 cut(s) 249
Bsp1286I GDGCHC 3 cut(s) 578, 845, 1180
Bsp1407I TGTACA 1 cut(s) 10
BspACI CCGC 3 cut(s) 121, 728, 738
BspANI GGCC 2 cut(s) 106, 763
BspCNI CTCAG 3 cut(s) 208, 564, 894
BspHI TCATGA 1 cut(s) 709
BspLI GGNNCC 3 cut(s) 125, 334, 771
BspMAI CTGCAG 1 cut(s) 1114
BspMI ACCTGC 1 cut(s) 1103
BspPI GGATC 4 cut(s) 242, 327, 340, 1067
BspQI GCTCTTC 1 cut(s) 921
BspT104I TTCGAA 1 cut(s) 249
BspT107I GGYRCC 2 cut(s) 123, 769
BsrDI GCAATG 2 cut(s) 752, 857
BsrGI TGTACA 1 cut(s) 10
BsrI ACTGG 1 cut(s) 423
BssECI CCNNGG 1 cut(s) 1139
BssNAI GTATAC 1 cut(s) 157
BssT1I CCWWGG 1 cut(s) 1139
Bst1107I GTATAC 1 cut(s) 157
Bst2UI CCWGG 2 cut(s) 128, 669
Bst4CI ACNGT 4 cut(s) 86, 557, 840, 863
Bst6I CTCTTC 1 cut(s) 921
BstAUI TGTACA 1 cut(s) 10
BstBAI YACGTR 1 cut(s) 1172
BstBI TTCGAA 1 cut(s) 249
BstC8I GCNNGC 4 cut(s) 275, 381, 489, 991
BstDEI CTNAG 5 cut(s) 216, 317, 572, 902, 1191
BstF5I GGATG 3 cut(s) 427, 931, 1149
BstMAI GTCTC 1 cut(s) 492
BstMWI GCNNNNNNNGC 1 cut(s) 769
BstNI CCWGG 2 cut(s) 128, 669
BstNSI RCATGY 5 cut(s) 11, 277, 491, 811, 919
BstSCI CCNGG 4 cut(s) 96, 126, 369, 667
BstSFI CTRYAG 2 cut(s) 1077, 1110
BstSLI GKGCMC 1 cut(s) 845
BstV1I GCAGC 7 cut(s) 130, 232, 713, 899, 902, 1096, 1152
BstX2I RGATCY 2 cut(s) 50, 332
BstYI RGATCY 2 cut(s) 50, 332
BstZ17I GTATAC 1 cut(s) 157
BsuRI GGCC 2 cut(s) 106, 763
BtgZI GCGATG 1 cut(s) 525
BtsCI GGATG 3 cut(s) 427, 931, 1149
BtsI GCAGTG 1 cut(s) 632
BtsIMutI CAGTG 3 cut(s) 416, 632, 845
BveI ACCTGC 1 cut(s) 1103
Cac8I GCNNGC 4 cut(s) 275, 381, 489, 991
CciI TCATGA 1 cut(s) 709
Cfr13I GGNCC 2 cut(s) 104, 518
CseI GACGC 2 cut(s) 149, 299
Csp6I GTAC 6 cut(s) 11, 875, 938, 1002, 1044, 1116
CviQI GTAC 6 cut(s) 11, 875, 938, 1002, 1044, 1116
DdeI CTNAG 5 cut(s) 216, 317, 572, 902, 1191
Eam1104I CTCTTC 1 cut(s) 921
EarI CTCTTC 1 cut(s) 921
Eco130I CCWWGG 1 cut(s) 1139
Eco24I GRGCYC 2 cut(s) 578, 1180
Eco32I GATATC 1 cut(s) 505
Eco47I GGWCC 1 cut(s) 518
Eco88I CYCGRG 1 cut(s) 242
EcoRII CCWGG 2 cut(s) 126, 667
EcoRV GATATC 1 cut(s) 505
EcoT14I CCWWGG 1 cut(s) 1139
EcoT22I ATGCAT 3 cut(s) 314, 489, 857
EcoT38I GRGCYC 2 cut(s) 578, 1180
ErhI CCWWGG 1 cut(s) 1139
Esp3I CGTCTC 1 cut(s) 492
FalI AAGNNNNNCTT 4 cut(s) 18, 50, 181, 213
FaqI GGGAC 3 cut(s) 18, 152, 383
FauNDI CATATG 1 cut(s) 610
FbaI TGATCA 3 cut(s) 256, 706, 1054
FblI GTMKAC 1 cut(s) 156
Fnu4HI GCNGC 8 cut(s) 122, 144, 221, 702, 888, 891, 1110, 1166
FokI GGATG 3 cut(s) 434, 918, 1156
FriOI GRGCYC 2 cut(s) 578, 1180
Fsp4HI GCNGC 8 cut(s) 122, 144, 221, 702, 888, 891, 1110, 1166
FspBI CTAG 4 cut(s) 464, 698, 752, 812
GluI GCNGC 8 cut(s) 122, 144, 221, 702, 888, 891, 1110, 1166
HaeIII GGCC 2 cut(s) 106, 763
HapII CCGG 4 cut(s) 98, 370, 387, 495
HgaI GACGC 2 cut(s) 149, 299
HindIII AAGCTT 1 cut(s) 377
HinfI GANTC 1 cut(s) 449
HpaII CCGG 4 cut(s) 98, 370, 387, 495
Hpy166II GTNNAC 3 cut(s) 157, 592, 653
Hpy188I TCNGA 4 cut(s) 117, 217, 454, 535
Hpy188III TCNNGA 2 cut(s) 593, 710
Hpy8I GTNNAC 3 cut(s) 157, 592, 653
HpyAV CCTTC 2 cut(s) 95, 1094
HpyCH4III ACNGT 4 cut(s) 86, 557, 840, 863
HpyCH4IV ACGT 3 cut(s) 153, 873, 1171
HpyF10VI GCNNNNNNNGC 1 cut(s) 769
HpyF3I CTNAG 5 cut(s) 216, 317, 572, 902, 1191
HpySE526I ACGT 3 cut(s) 153, 873, 1171
Ksp22I TGATCA 3 cut(s) 256, 706, 1054
LguI GCTCTTC 1 cut(s) 921
LmnI GCTCC 1 cut(s) 1162
Lsp1109I GCAGC 7 cut(s) 130, 232, 713, 899, 902, 1096, 1152
LweI GCATC 5 cut(s) 502, 607, 864, 940, 1134
MaeI CTAG 4 cut(s) 464, 698, 752, 812
MaeII ACGT 3 cut(s) 153, 873, 1171
MaeIII GTNAC 2 cut(s) 179, 863
MboII GAAGA 9 cut(s) 34, 53, 89, 485, 522, 560, 644, 647, 938
MfeI CAATTG 1 cut(s) 882
MflI RGATCY 2 cut(s) 50, 332
MhlI GDGCHC 3 cut(s) 578, 845, 1180
MluCI AATT 5 cut(s) 456, 640, 733, 823, 882
Mph1103I ATGCAT 3 cut(s) 314, 489, 857
MseI TTAA 1 cut(s) 459
MspA1I CMGCKG 2 cut(s) 704, 785
MspI CCGG 4 cut(s) 98, 370, 387, 495
MspR9I CCNGG 4 cut(s) 98, 128, 371, 669
MunI CAATTG 1 cut(s) 882
Mva1269I GAATGC 1 cut(s) 95
MvaI CCWGG 2 cut(s) 128, 669
MwoI GCNNNNNNNGC 1 cut(s) 769
NciI CCSGG 2 cut(s) 98, 371
NdeI CATATG 1 cut(s) 610
NlaIV GGNNCC 3 cut(s) 125, 334, 771
NmuCI GTSAC 1 cut(s) 863
NsiI ATGCAT 3 cut(s) 314, 489, 857
NspI RCATGY 5 cut(s) 11, 277, 491, 811, 919
NspV TTCGAA 1 cut(s) 249
PaeI GCATGC 2 cut(s) 277, 491
PaeR7I CTCGAG 1 cut(s) 242
PagI TCATGA 1 cut(s) 709
PciI ACATGT 2 cut(s) 7, 915
PciSI GCTCTTC 1 cut(s) 921
PcsI WCGNNNNNNNCGW 2 cut(s) 507, 1177
PctI GAATGC 1 cut(s) 95
PfeI GAWTC 1 cut(s) 449
PfoI TCCNGGA 1 cut(s) 96
PkrI GCNGC 8 cut(s) 123, 145, 222, 703, 889, 892, 1111, 1167
Ppu21I YACGTR 1 cut(s) 1172
PscI ACATGT 2 cut(s) 7, 915
Psp6I CCWGG 2 cut(s) 126, 667
PspGI CCWGG 2 cut(s) 126, 667
PspN4I GGNNCC 3 cut(s) 125, 334, 771
PspPI GGNCC 2 cut(s) 104, 518
PspXI VCTCGAGB 1 cut(s) 242
PstI CTGCAG 1 cut(s) 1114
PsuI RGATCY 2 cut(s) 50, 332
PvuII CAGCTG 2 cut(s) 704, 785
RsaI GTAC 6 cut(s) 12, 876, 939, 1003, 1045, 1117
RsaNI GTAC 6 cut(s) 11, 875, 938, 1002, 1044, 1116
SapI GCTCTTC 1 cut(s) 921
SaqAI TTAA 1 cut(s) 459
SatI GCNGC 8 cut(s) 122, 144, 221, 702, 888, 891, 1110, 1166
Sau96I GGNCC 2 cut(s) 104, 518
ScaI AGTACT 2 cut(s) 1003, 1045
ScrFI CCNGG 4 cut(s) 98, 128, 371, 669
SduI GDGCHC 3 cut(s) 578, 845, 1180
SfaNI GCATC 5 cut(s) 502, 607, 864, 940, 1134
SfcI CTRYAG 2 cut(s) 1077, 1110
Sfr274I CTCGAG 1 cut(s) 242
SfuI TTCGAA 1 cut(s) 249
SinI GGWCC 1 cut(s) 518
SlaI CTCGAG 1 cut(s) 242
SmlI CTYRAG 2 cut(s) 35, 242
SmoI CTYRAG 2 cut(s) 35, 242
SphI GCATGC 2 cut(s) 277, 491
Sse9I AATT 5 cut(s) 456, 640, 733, 823, 882
SsiI CCGC 3 cut(s) 121, 728, 738
SspMI CTAG 4 cut(s) 464, 698, 752, 812
StyD4I CCNGG 4 cut(s) 96, 126, 369, 667
StyI CCWWGG 1 cut(s) 1139
TaaI ACNGT 4 cut(s) 86, 557, 840, 863
TaiI ACGT 3 cut(s) 156, 876, 1174
TaqI TCGA 8 cut(s) 243, 249, 675, 804, 833, 1037, 1063, 1180
TasI AATT 5 cut(s) 456, 640, 733, 823, 882
TatI WGTACW 3 cut(s) 10, 1001, 1043
TauI GCSGC 1 cut(s) 124
TfiI GAWTC 1 cut(s) 449
Tru1I TTAA 1 cut(s) 459
Tru9I TTAA 1 cut(s) 459
TscAI CASTG 3 cut(s) 423, 632, 845
TseFI GTSAC 1 cut(s) 863
TseI GCWGC 7 cut(s) 143, 220, 701, 887, 890, 1109, 1165
Tsp45I GTSAC 1 cut(s) 863
TspDTI ATGAA 2 cut(s) 726, 1113
TspRI CASTG 3 cut(s) 423, 632, 845
VpaK11BI GGWCC 1 cut(s) 518
XceI RCATGY 5 cut(s) 11, 277, 491, 811, 919
XhoI CTCGAG 1 cut(s) 242
XmiI GTMKAC 1 cut(s) 156
XspI CTAG 4 cut(s) 464, 698, 752, 812
ZrmI AGTACT 2 cut(s) 1003, 1045
Zsp2I ATGCAT 3 cut(s) 314, 489, 857
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.