Rorug02G0222600

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000224
Physical Location & Seq
Forward (+)
21568483 .. 21571310
2828 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0222600.1

Sequence Viewer

Length: 978 bp
ATGGGTGTGAAAGGTTTTGTTGAAGGGGGCATAGCTTCCATCATTGCCGGGTGTTCGACTCACCCCTTGGACCTGATCAAGGTCCGAATGCAGCTCCAGGGTGAGACTCAGGTGCCGAAACCTGACCCGGCCGCGGCTCAAGCACTTCGACCAGCGATGGCTGCGGCCGCTCGGGGAGGCTCTTCCTCCATTCATGTCCCTGTCCCGCCGCCGCCGCCGCCCCGCGTGGGTCCAATTGCCGTCGGAGTCAGGATCATTCAGCAAGAGGGTGTTGCCGCCATGTTCTCTGGCGTATCCGCCACCATGCTCCGCCAGTGCTTGTACTCCACCACCCGGATGGGCTTGTACGACATTCTCAAGAAGAAATGGACCGACCCGGAATCCGGCAACATGCCACTCCAGCGAAAAATCGGTGCCGGACTGATCGCCGGAGCCATCGGGGCGGCGGTCGGGAACCCGGCCGACGTGGCCATGGTGCGGATGCAGGCAGACGGCCGTCTCCCGGCTGCCCAGCGCCGTAACTACAAAAGCGTGGTGGACGCTATAACCTGTATGGCGAAACAAGAAGGTGTCACGAGCCTGTGGCGCGGTTCGTCTCTCACCGTGAACCGCGCTATGCTCGTCACAGCTTCACAGCTGGCTTCTTACGACCAGATCAAGGAAACAATTCTCGATAAAGGGCTGATGCGAGACGGGCTCGGGACCCACATAACCGCGAGCTTCGCAGCGGGGTTTGTGGCAGCGGTAGCGTCGAACCCGGTGGACGTGATCAAGACCCGGGTGATGAACATGAAGGTGGAGCCAGGGGCGGCGCCACCATACAAGGGGGCGCTGGACTGCGCGGTGAAAACGGTGCGTTCGGAAGGGCCAATGGCGCTTTACAAAGGGTTTATACCTACGATTTCTAGGCAGGGGCCTTTCACTGTCGTGCTGTTTGTGACATTGGAGCAGGTAAGAAAGTTGCTCAAAGATTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

325

Amino Acids

34.3

Weight (kDa)

9.88

Isoelectric Point (pI)

33.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 4 - 124 1.4e-15 Mitochondrial carrier protein
Mito_carr PF00153 132 - 226 1.6e-19 Mitochondrial carrier protein
Mito_carr PF00153 234 - 323 4.5e-21 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000224)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g08145 FvH4_4g05492 FvH4_4g15892
pyrus_communis pycom07g09690 pycom16g18380
rosa_chinensis RchiOBHm_Chr0c17g0499961 RchiOBHm_Chr1g0345631 RchiOBHm_Chr1g0345641 RchiOBHm_Chr1g0381191 RchiOBHm_Chr2g0102381 RchiOBHm_Chr2g0106131 RchiOBHm_Chr2g0148461 RchiOBHm_Chr2g0148471 RchiOBHm_Chr2g0157121 RchiOBHm_Chr3g0476041 RchiOBHm_Chr3g0476051 RchiOBHm_Chr3g0486961 RchiOBHm_Chr3g0487551 RchiOBHm_Chr4g0385011 RchiOBHm_Chr4g0410891 RchiOBHm_Chr4g0415291 RchiOBHm_Chr4g0427801 RchiOBHm_Chr4g0427811 RchiOBHm_Chr5g0001961 RchiOBHm_Chr5g0009841 RchiOBHm_Chr5g0025231 RchiOBHm_Chr6g0272461 RchiOBHm_Chr7g0199391 RchiOBHm_Chr7g0214031
rosa_laevigata RLG00000000706 RLG00000000749 RLG00000000750 RLG00000001166 RLG00000001748 RLG00000008952 RLG00000009088 RLG00000009090 RLG00000009094 RLG00000015391 RLG00000016519 RLG00000016520 RLG00000017174 RLG00000018887 RLG00000023058 RLG00000023059 RLG00000028282 RLG00000028531 RLG00000030444 RLG00000034592 RLG00000036555
rosa_multiflora Rmu_sc0000045.1_g000015 Rmu_sc0000157.1_g000011 Rmu_sc0000493.1_g000080 Rmu_sc0001307.1_g000027 Rmu_sc0001470.1_g000010 Rmu_sc0002277.1_g000022 Rmu_sc0002365.1_g000027 Rmu_sc0002693.1_g000008 Rmu_sc0002833.1_g000051 Rmu_sc0003275.1_g000066 Rmu_sc0003286.1_g000008 Rmu_sc0004234.1_g000035 Rmu_sc0004546.1_g000001 Rmu_sc0005058.1_g000004 Rmu_sc0007025.1_g000015 Rmu_sc0008144.1_g000006 Rmu_sc0008688.1_g000001 Rmu_sc0009185.1_g000010 Rmu_sc0020638.1_g000001
rosa_roxburghii Rroxscaffold_158G00443750 Rroxscaffold_1G00001770 Rroxscaffold_1G00002620 Rroxscaffold_1G00024490 Rroxscaffold_1G00035180 Rroxscaffold_1G00035190 Rroxscaffold_1G00061370 Rroxscaffold_1G00075590 Rroxscaffold_2G00110960 Rroxscaffold_2G00121340 Rroxscaffold_2G00128850 Rroxscaffold_2G00142580 Rroxscaffold_2G00142590 Rroxscaffold_3G00223630 Rroxscaffold_3G00263220 Rroxscaffold_4G00310820 Rroxscaffold_5G00336270 Rroxscaffold_5G00336280 Rroxscaffold_5G00336320 Rroxscaffold_5G00349820 Rroxscaffold_6G00395720 Rroxscaffold_6G00395910 Rroxscaffold_6G00415660 Rroxscaffold_7G00179770 Rroxscaffold_7G00184390 Rroxscaffold_7G00189270 Rroxscaffold_7G00197240 Rroxscaffold_8G00436850 Rroxscaffold_8G00436860 Rroxscaffold_8G00436880
rosa_rugosa Rorug01G0118400 Rorug02G0048900 Rorug02G0185600 Rorug02G0222600 Rorug03G0152800 Rorug04G0047600 Rorug04G0446400 Rorug05G0118900 Rorug05G0359700 Rorug05G0374800 Rorug05G0374900 Rorug05G0375000 Rorug05G0375100 Rorug05G0418900 Rorug05G0540000 Rorug05G0540000 Rorug05G0540100 Rorug06G0358700 Rorug06G0358700 Rorug06G0408700 Rorug06G0408700 Rorug06G0408800 Rorug06G0408900 Rorug07G0203000
rosa_samantha Rh1CG190700 Rh1CG196300 Rh2BG566600 Rh2CG188900 Rh3AG090900 Rh3AG278200 Rh3BG233900 Rh3CG094300 Rh4BG202100 Rh5BG543100 Rh5CG566000 Rh5DG397500 Rh7CG432800
rosa_wichuraiana Rw0G017850 Rw1G010340 Rw1G016290 Rw2G018520 Rw3G008970 Rw5G028090 Rw5G043930 Rw6G014660 Rw6G030340 Rw7G038240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 940
AccB1I GGYRCC 3 cut(s) 112, 413, 811
AccBSI CCGCTC 1 cut(s) 170
AccII CGCG 6 cut(s) 134, 225, 588, 612, 716, 842
AclWI GGATC 1 cut(s) 260
AcoI YGGCCR 5 cut(s) 129, 165, 459, 468, 493
AcyI GRCGYC 1 cut(s) 812
AfaI GTAC 2 cut(s) 323, 347
AfiI CCNNNNNNNGG 9 cut(s) 79, 133, 227, 333, 383, 477, 502, 658, 824
AgsI TTSAA 1 cut(s) 23
AjiI CACGTC 2 cut(s) 466, 766
AjnI CCWGG 2 cut(s) 96, 802
AleI CACNNNNGTG 1 cut(s) 926
AluBI AGCT 5 cut(s) 35, 94, 629, 637, 720
AluI AGCT 5 cut(s) 35, 94, 629, 637, 720
Alw26I GTCTC 4 cut(s) 98, 503, 600, 684
AlwI GGATC 1 cut(s) 260
Ama87I CYCGRG 3 cut(s) 171, 698, 777
AoxI GGCC 7 cut(s) 129, 165, 459, 468, 493, 866, 914
ApeKI GCWGC 5 cut(s) 91, 161, 506, 725, 740
Asp700I GAANNNNTTC 1 cut(s) 666
AspLEI GCGC 7 cut(s) 516, 588, 614, 814, 832, 842, 877
AspS9I GGNCC 7 cut(s) 70, 82, 230, 369, 702, 866, 914
AsuC2I CCSGG 9 cut(s) 49, 128, 334, 377, 458, 503, 758, 778, 779
AsuHPI GGTGA 5 cut(s) 53, 113, 592, 793, 856
AvaI CYCGRG 3 cut(s) 171, 698, 777
AvaII GGWCC 5 cut(s) 70, 82, 230, 369, 702
BalI TGGCCA 1 cut(s) 470
BanI GGYRCC 3 cut(s) 112, 413, 811
BanII GRGCYC 1 cut(s) 699
BauI CACGAG 1 cut(s) 574
BbvI GCAGC 5 cut(s) 103, 148, 493, 737, 752
BccI CCATC 4 cut(s) 47, 151, 331, 443
BceAI ACGGC 4 cut(s) 224, 480, 501, 508
BciT130I CCWGG 2 cut(s) 98, 804
BciVI GTATCC 1 cut(s) 304
BclI TGATCA 2 cut(s) 75, 768
BcnI CCSGG 9 cut(s) 49, 128, 334, 377, 458, 503, 758, 778, 779
BcoDI GTCTC 4 cut(s) 98, 503, 600, 684
BfaI CTAG 1 cut(s) 906
BfoI RGCGCY 4 cut(s) 517, 815, 833, 878
BfuAI ACCTGC 1 cut(s) 940
BfuI GTATCC 1 cut(s) 304
BglI GCCNNNNNGGC 2 cut(s) 440, 467
Bme18I GGWCC 5 cut(s) 70, 82, 230, 369, 702
BmeT110I CYCGRG 3 cut(s) 171, 698, 777
BmgBI CACGTC 2 cut(s) 466, 766
BmgT120I GGNCC 7 cut(s) 70, 82, 230, 369, 702, 866, 914
BmsI GCATC 2 cut(s) 471, 675
BoxI GACNNNNGTC 1 cut(s) 495
BplI GAGNNNNNCTC 2 cut(s) 681, 713
BpmI CTGGAG 2 cut(s) 80, 383
BpuEI CTTGAG 2 cut(s) 123, 341
BpuMI CCSGG 9 cut(s) 49, 128, 334, 377, 458, 503, 758, 778, 779
BsaHI GRCGYC 1 cut(s) 812
BsaJI CCNNGG 6 cut(s) 66, 97, 132, 471, 777, 803
Bsc4I CCNNNNNNNGG 9 cut(s) 79, 133, 227, 333, 383, 477, 502, 658, 824
Bse1I ACTGG 1 cut(s) 313
Bse3DI GCAATG 1 cut(s) 42
BseBI CCWGG 2 cut(s) 98, 804
BseDI CCNNGG 6 cut(s) 66, 97, 132, 471, 777, 803
BseGI GGATG 2 cut(s) 342, 486
BseLI CCNNNNNNNGG 9 cut(s) 79, 133, 227, 333, 383, 477, 502, 658, 824
BseMI GCAATG 1 cut(s) 42
BseMII CTCAG 1 cut(s) 122
BseNI ACTGG 1 cut(s) 313
BseX3I CGGCCG 4 cut(s) 129, 165, 459, 493
BseXI GCAGC 5 cut(s) 103, 148, 493, 737, 752
BseYI CCCAGC 1 cut(s) 510
Bsh1236I CGCG 6 cut(s) 134, 225, 588, 612, 716, 842
Bsh1285I CGRYCG 5 cut(s) 132, 168, 450, 462, 496
BshFI GGCC 7 cut(s) 131, 167, 461, 470, 495, 868, 916
BshNI GGYRCC 3 cut(s) 112, 413, 811
BsiEI CGRYCG 5 cut(s) 132, 168, 450, 462, 496
BsiHKCI CYCGRG 3 cut(s) 171, 698, 777
BslFI GGGAC 3 cut(s) 182, 188, 715
BslI CCNNNNNNNGG 9 cut(s) 79, 133, 227, 333, 383, 477, 502, 658, 824
BsmAI GTCTC 4 cut(s) 98, 503, 600, 684
BsmBI CGTCTC 3 cut(s) 503, 600, 684
BsmFI GGGAC 3 cut(s) 182, 188, 715
BsmI GAATGC 1 cut(s) 93
BsnI GGCC 7 cut(s) 131, 167, 461, 470, 495, 868, 916
BsoBI CYCGRG 3 cut(s) 171, 698, 777
Bsp1286I GDGCHC 1 cut(s) 699
Bsp143I GATC 5 cut(s) 75, 252, 423, 654, 768
Bsp19I CCATGG 1 cut(s) 471
BspANI GGCC 7 cut(s) 131, 167, 461, 470, 495, 868, 916
BspCNI CTCAG 1 cut(s) 121
BspFNI CGCG 6 cut(s) 134, 225, 588, 612, 716, 842
BspMI ACCTGC 1 cut(s) 940
BspPI GGATC 1 cut(s) 260
BspQI GCTCTTC 1 cut(s) 187
BspT107I GGYRCC 3 cut(s) 112, 413, 811
BsrBI CCGCTC 1 cut(s) 170
BsrDI GCAATG 1 cut(s) 42
BsrI ACTGG 1 cut(s) 313
BssECI CCNNGG 6 cut(s) 66, 97, 132, 471, 777, 803
BssMI GATC 5 cut(s) 75, 252, 423, 654, 768
BssNI GRCGYC 1 cut(s) 812
BssSI CACGAG 1 cut(s) 574
BssT1I CCWWGG 2 cut(s) 66, 471
Bst2BI CACGAG 1 cut(s) 574
Bst2UI CCWGG 2 cut(s) 98, 804
Bst4CI ACNGT 3 cut(s) 604, 853, 925
Bst6I CTCTTC 1 cut(s) 187
BstACI GRCGYC 1 cut(s) 812
BstC8I GCNNGC 3 cut(s) 486, 639, 718
BstDEI CTNAG 1 cut(s) 108
BstDSI CCRYGG 2 cut(s) 132, 471
BstENI CCTNNNNNAGG 1 cut(s) 77
BstF5I GGATG 2 cut(s) 342, 486
BstFNI CGCG 6 cut(s) 134, 225, 588, 612, 716, 842
BstH2I RGCGCY 4 cut(s) 517, 815, 833, 878
BstHHI GCGC 7 cut(s) 516, 588, 614, 814, 832, 842, 877
BstKTI GATC 5 cut(s) 78, 255, 426, 657, 771
BstMAI GTCTC 4 cut(s) 98, 503, 600, 684
BstMBI GATC 5 cut(s) 75, 252, 423, 654, 768
BstMCI CGRYCG 5 cut(s) 132, 168, 450, 462, 496
BstNI CCWGG 2 cut(s) 98, 804
BstNSI RCATGY 1 cut(s) 394
BstPAI GACNNNNGTC 1 cut(s) 495
BstUI CGCG 6 cut(s) 134, 225, 588, 612, 716, 842
BstV1I GCAGC 5 cut(s) 103, 148, 493, 737, 752
BstXI CCANNNNNNTGG 1 cut(s) 337
BstZI CGGCCG 4 cut(s) 129, 165, 459, 493
BsuI GTATCC 1 cut(s) 304
BsuRI GGCC 7 cut(s) 131, 167, 461, 470, 495, 868, 916
BtgI CCRYGG 2 cut(s) 132, 471
BtgZI GCGATG 1 cut(s) 170
BtrI CACGTC 2 cut(s) 466, 766
BtsCI GGATG 2 cut(s) 342, 486
BtsIMutI CAGTG 2 cut(s) 320, 921
BveI ACCTGC 1 cut(s) 940
Cac8I GCNNGC 3 cut(s) 486, 639, 718
CciNI GCGGCCGC 1 cut(s) 165
CfoI GCGC 7 cut(s) 516, 588, 614, 814, 832, 842, 877
Cfr13I GGNCC 7 cut(s) 70, 82, 230, 369, 702, 866, 914
Cfr42I CCGCGG 1 cut(s) 135
Cfr9I CCCGGG 1 cut(s) 777
CseI GACGC 2 cut(s) 548, 738
Csp6I GTAC 2 cut(s) 322, 346
CviAII CATG 6 cut(s) 194, 280, 304, 391, 472, 790
CviQI GTAC 2 cut(s) 322, 346
DdeI CTNAG 1 cut(s) 108
DinI GGCGCC 1 cut(s) 813
DpnI GATC 5 cut(s) 77, 254, 425, 656, 770
DpnII GATC 5 cut(s) 75, 252, 423, 654, 768
EaeI YGGCCR 5 cut(s) 129, 165, 459, 468, 493
EagI CGGCCG 4 cut(s) 129, 165, 459, 493
Eam1104I CTCTTC 1 cut(s) 187
EarI CTCTTC 1 cut(s) 187
EciI GGCGGA 2 cut(s) 286, 299
EclXI CGGCCG 4 cut(s) 129, 165, 459, 493
Eco130I CCWWGG 2 cut(s) 66, 471
Eco24I GRGCYC 1 cut(s) 699
Eco47I GGWCC 5 cut(s) 70, 82, 230, 369, 702
Eco52I CGGCCG 4 cut(s) 129, 165, 459, 493
Eco88I CYCGRG 3 cut(s) 171, 698, 777
EcoNI CCTNNNNNAGG 1 cut(s) 77
EcoO109I RGGNCCY 2 cut(s) 702, 914
EcoRII CCWGG 2 cut(s) 96, 802
EcoT14I CCWWGG 2 cut(s) 66, 471
EcoT38I GRGCYC 1 cut(s) 699
EgeI GGCGCC 1 cut(s) 813
EheI GGCGCC 1 cut(s) 813
ErhI CCWWGG 2 cut(s) 66, 471
Esp3I CGTCTC 3 cut(s) 503, 600, 684
FaeI CATG 6 cut(s) 197, 283, 307, 394, 475, 793
FaqI GGGAC 3 cut(s) 182, 188, 715
FatI CATG 6 cut(s) 193, 279, 303, 390, 471, 789
FauI CCCGC 3 cut(s) 213, 230, 721
FbaI TGATCA 2 cut(s) 75, 768
FokI GGATG 2 cut(s) 349, 493
FriOI GRGCYC 1 cut(s) 699
FspBI CTAG 1 cut(s) 906
GlaI GCGC 7 cut(s) 515, 587, 613, 813, 831, 841, 876
GsaI CCCAGC 1 cut(s) 514
GsuI CTGGAG 2 cut(s) 80, 383
HaeII RGCGCY 4 cut(s) 517, 815, 833, 878
HaeIII GGCC 7 cut(s) 131, 167, 461, 470, 495, 868, 916
HgaI GACGC 2 cut(s) 548, 738
HhaI GCGC 7 cut(s) 516, 588, 614, 814, 832, 842, 877
Hin1I GRCGYC 1 cut(s) 812
Hin1II CATG 6 cut(s) 197, 283, 307, 394, 475, 793
Hin6I GCGC 7 cut(s) 514, 586, 612, 812, 830, 840, 875
HinP1I GCGC 7 cut(s) 514, 586, 612, 812, 830, 840, 875
HinfI GANTC 4 cut(s) 58, 106, 246, 380
HphI GGTGA 5 cut(s) 53, 113, 592, 793, 856
Hpy166II GTNNAC 3 cut(s) 538, 607, 763
Hpy188I TCNGA 4 cut(s) 86, 245, 862, 977
Hpy188III TCNNGA 7 cut(s) 250, 358, 451, 574, 671, 700, 772
Hpy8I GTNNAC 3 cut(s) 538, 607, 763
Hpy99I CGWCG 3 cut(s) 245, 467, 754
HpyAV CCTTC 4 cut(s) 17, 560, 787, 857
HpyCH4III ACNGT 3 cut(s) 604, 853, 925
HpyCH4IV ACGT 2 cut(s) 465, 765
HpyCH4V TGCA 2 cut(s) 91, 484
HpyF3I CTNAG 1 cut(s) 108
HpySE526I ACGT 2 cut(s) 465, 765
Hsp92I GRCGYC 1 cut(s) 812
Hsp92II CATG 6 cut(s) 197, 283, 307, 394, 475, 793
HspAI GCGC 7 cut(s) 514, 586, 612, 812, 830, 840, 875
KasI GGCGCC 1 cut(s) 811
KflI GGGWCCC 1 cut(s) 702
Ksp22I TGATCA 2 cut(s) 75, 768
KspI CCGCGG 1 cut(s) 135
Kzo9I GATC 5 cut(s) 75, 252, 423, 654, 768
LguI GCTCTTC 1 cut(s) 187
LmnI GCTCC 5 cut(s) 99, 312, 431, 799, 946
Lsp1109I GCAGC 5 cut(s) 103, 148, 493, 737, 752
LweI GCATC 2 cut(s) 471, 675
MaeI CTAG 1 cut(s) 906
MaeII ACGT 2 cut(s) 465, 765
MaeIII GTNAC 4 cut(s) 518, 571, 622, 937
MalI GATC 5 cut(s) 77, 254, 425, 656, 770
MbiI CCGCTC 1 cut(s) 170
MboI GATC 5 cut(s) 75, 252, 423, 654, 768
MboII GAAGA 2 cut(s) 174, 373
MfeI CAATTG 1 cut(s) 234
MhlI GDGCHC 1 cut(s) 699
MlsI TGGCCA 1 cut(s) 470
MluCI AATT 2 cut(s) 234, 666
MluNI TGGCCA 1 cut(s) 470
Mly113I GGCGCC 1 cut(s) 812
MlyI GAGTC 3 cut(s) 52, 100, 255
MmeI TCCRAC 1 cut(s) 223
MnlI CCTC 3 cut(s) 170, 196, 259
Mox20I TGGCCA 1 cut(s) 470
MroXI GAANNNNTTC 1 cut(s) 666
MscI TGGCCA 1 cut(s) 470
MslI CAYNNNNRTG 3 cut(s) 335, 794, 926
Msp20I TGGCCA 1 cut(s) 470
MspA1I CMGCKG 4 cut(s) 134, 637, 728, 743
MunI CAATTG 1 cut(s) 234
Mva1269I GAATGC 1 cut(s) 93
MvaI CCWGG 2 cut(s) 98, 804
MvnI CGCG 6 cut(s) 134, 225, 588, 612, 716, 842
NarI GGCGCC 1 cut(s) 812
NciI CCSGG 9 cut(s) 49, 128, 334, 377, 458, 503, 758, 778, 779
NcoI CCATGG 1 cut(s) 471
NdeII GATC 5 cut(s) 75, 252, 423, 654, 768
NlaIII CATG 6 cut(s) 197, 283, 307, 394, 475, 793
NmuCI GTSAC 3 cut(s) 571, 622, 937
NotI GCGGCCGC 1 cut(s) 165
NspI RCATGY 1 cut(s) 394
OliI CACNNNNGTG 1 cut(s) 926
PciSI GCTCTTC 1 cut(s) 187
PctI GAATGC 1 cut(s) 93
PdmI GAANNNNTTC 1 cut(s) 666
PfeI GAWTC 1 cut(s) 380
PleI GAGTC 3 cut(s) 52, 100, 254
PluTI GGCGCC 1 cut(s) 815
PpsI GAGTC 3 cut(s) 52, 100, 254
PpuMI RGGWCCY 1 cut(s) 702
PshAI GACNNNNGTC 1 cut(s) 495
Psp5II RGGWCCY 1 cut(s) 702
Psp6I CCWGG 2 cut(s) 96, 802
PspFI CCCAGC 1 cut(s) 510
PspGI CCWGG 2 cut(s) 96, 802
PspPI GGNCC 7 cut(s) 70, 82, 230, 369, 702, 866, 914
PspPPI RGGWCCY 1 cut(s) 702
PvuII CAGCTG 1 cut(s) 637
RsaI GTAC 2 cut(s) 323, 347
RsaNI GTAC 2 cut(s) 322, 346
RseI CAYNNNNRTG 3 cut(s) 335, 794, 926
SacII CCGCGG 1 cut(s) 135
SapI GCTCTTC 1 cut(s) 187
Sau3AI GATC 5 cut(s) 75, 252, 423, 654, 768
Sau96I GGNCC 7 cut(s) 70, 82, 230, 369, 702, 866, 914
SchI GAGTC 3 cut(s) 52, 100, 255
SduI GDGCHC 1 cut(s) 699
SfaNI GCATC 2 cut(s) 471, 675
SfiI GGCCNNNNNGGCC 1 cut(s) 467
SfoI GGCGCC 1 cut(s) 813
Sfr303I CCGCGG 1 cut(s) 135
SgrBI CCGCGG 1 cut(s) 135
SinI GGWCC 5 cut(s) 70, 82, 230, 369, 702
SmaI CCCGGG 1 cut(s) 779
SmiMI CAYNNNNRTG 3 cut(s) 335, 794, 926
SmlI CTYRAG 2 cut(s) 138, 356
SmoI CTYRAG 2 cut(s) 138, 356
Sse9I AATT 2 cut(s) 234, 666
SspDI GGCGCC 1 cut(s) 811
SspMI CTAG 1 cut(s) 906
StyI CCWWGG 2 cut(s) 66, 471
TaaI ACNGT 3 cut(s) 604, 853, 925
TaiI ACGT 2 cut(s) 468, 768
TaqI TCGA 4 cut(s) 56, 148, 672, 752
TaqII GACCGA 1 cut(s) 386
TasI AATT 2 cut(s) 234, 666
TatI WGTACW 1 cut(s) 321
TfiI GAWTC 1 cut(s) 380
TscAI CASTG 2 cut(s) 320, 928
TseFI GTSAC 3 cut(s) 571, 622, 937
TseI GCWGC 5 cut(s) 91, 161, 506, 725, 740
Tsp45I GTSAC 3 cut(s) 571, 622, 937
TspDTI ATGAA 3 cut(s) 182, 800, 806
TspMI CCCGGG 1 cut(s) 777
TspRI CASTG 2 cut(s) 320, 928
VpaK11BI GGWCC 5 cut(s) 70, 82, 230, 369, 702
XagI CCTNNNNNAGG 1 cut(s) 77
XceI RCATGY 1 cut(s) 394
XcmI CCANNNNNNNNNTGG 1 cut(s) 334
XmaI CCCGGG 1 cut(s) 777
XmnI GAANNNNTTC 1 cut(s) 666
XspI CTAG 1 cut(s) 906
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.