TdcA1-ORF2 protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 3 cut(s) | 23, 56, 335 |
| AcuI | CTGAAG | 1 cut(s) | 287 |
| AgsI | TTSAA | 3 cut(s) | 260, 290, 298 |
| AluBI | AGCT | 1 cut(s) | 344 |
| AluI | AGCT | 1 cut(s) | 344 |
| Alw21I | GWGCWC | 1 cut(s) | 136 |
| ApoI | RAATTY | 3 cut(s) | 23, 56, 335 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 224 |
| AsuHPI | GGTGA | 2 cut(s) | 158, 194 |
| Bbv12I | GWGCWC | 1 cut(s) | 136 |
| BceAI | ACGGC | 1 cut(s) | 27 |
| BmsI | GCATC | 2 cut(s) | 163, 295 |
| BpuEI | CTTGAG | 1 cut(s) | 93 |
| BsaWI | WCCGGW | 1 cut(s) | 143 |
| BseGI | GGATG | 2 cut(s) | 178, 310 |
| BsiHKAI | GWGCWC | 1 cut(s) | 136 |
| BsiSI | CCGG | 1 cut(s) | 144 |
| BsmI | GAATGC | 2 cut(s) | 14, 321 |
| Bsp1286I | GDGCHC | 1 cut(s) | 136 |
| Bsp143I | GATC | 1 cut(s) | 159 |
| BssMI | GATC | 1 cut(s) | 159 |
| Bst4CI | ACNGT | 1 cut(s) | 67 |
| BstC8I | GCNNGC | 1 cut(s) | 276 |
| BstF5I | GGATG | 2 cut(s) | 178, 310 |
| BstKTI | GATC | 1 cut(s) | 162 |
| BstMBI | GATC | 1 cut(s) | 159 |
| BstNSI | RCATGY | 1 cut(s) | 278 |
| BtsCI | GGATG | 2 cut(s) | 178, 310 |
| BtsIMutI | CAGTG | 1 cut(s) | 72 |
| Cac8I | GCNNGC | 1 cut(s) | 276 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 194, 229 |
| CviAII | CATG | 2 cut(s) | 236, 275 |
| CviJI | RGCY | 3 cut(s) | 36, 91, 344 |
| CviKI_1 | RGCY | 3 cut(s) | 36, 91, 344 |
| DpnI | GATC | 1 cut(s) | 161 |
| DpnII | GATC | 1 cut(s) | 159 |
| DraI | TTTAAA | 1 cut(s) | 22 |
| Eco57I | CTGAAG | 1 cut(s) | 287 |
| FaeI | CATG | 2 cut(s) | 239, 278 |
| FaiI | YATR | 6 cut(s) | 8, 33, 199, 230, 237, 276 |
| FatI | CATG | 2 cut(s) | 235, 274 |
| FokI | GGATG | 2 cut(s) | 185, 317 |
| HapII | CCGG | 1 cut(s) | 144 |
| Hin1II | CATG | 2 cut(s) | 239, 278 |
| HpaII | CCGG | 1 cut(s) | 144 |
| HphI | GGTGA | 2 cut(s) | 158, 194 |
| HpyAV | CCTTC | 2 cut(s) | 262, 292 |
| HpyCH4III | ACNGT | 1 cut(s) | 67 |
| HpyCH4V | TGCA | 3 cut(s) | 190, 319, 332 |
| Hsp92II | CATG | 2 cut(s) | 239, 278 |
| Kzo9I | GATC | 1 cut(s) | 159 |
| LmnI | GCTCC | 1 cut(s) | 271 |
| LpnPI | CCDG | 2 cut(s) | 155, 157 |
| LweI | GCATC | 2 cut(s) | 163, 295 |
| MalI | GATC | 1 cut(s) | 161 |
| MboI | GATC | 1 cut(s) | 159 |
| MboII | GAAGA | 4 cut(s) | 161, 251, 272, 302 |
| MhlI | GDGCHC | 1 cut(s) | 136 |
| MluCI | AATT | 6 cut(s) | 23, 56, 152, 293, 323, 335 |
| MnlI | CCTC | 1 cut(s) | 295 |
| MroXI | GAANNNNTTC | 1 cut(s) | 224 |
| MseI | TTAA | 3 cut(s) | 21, 102, 346 |
| MslI | CAYNNNNRTG | 2 cut(s) | 207, 240 |
| MspI | CCGG | 1 cut(s) | 144 |
| Mva1269I | GAATGC | 2 cut(s) | 14, 321 |
| NdeII | GATC | 1 cut(s) | 159 |
| NlaIII | CATG | 2 cut(s) | 239, 278 |
| NspI | RCATGY | 1 cut(s) | 278 |
| PaeI | GCATGC | 1 cut(s) | 278 |
| PctI | GAATGC | 2 cut(s) | 14, 321 |
| PdmI | GAANNNNTTC | 1 cut(s) | 224 |
| RseI | CAYNNNNRTG | 2 cut(s) | 207, 240 |
| SaqAI | TTAA | 3 cut(s) | 21, 102, 346 |
| Sau3AI | GATC | 1 cut(s) | 159 |
| SduI | GDGCHC | 1 cut(s) | 136 |
| SetI | ASST | 1 cut(s) | 346 |
| SfaNI | GCATC | 2 cut(s) | 163, 295 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 207, 240 |
| SmlI | CTYRAG | 1 cut(s) | 108 |
| SmoI | CTYRAG | 1 cut(s) | 108 |
| SphI | GCATGC | 1 cut(s) | 278 |
| Sse9I | AATT | 6 cut(s) | 23, 56, 152, 293, 323, 335 |
| SspI | AATATT | 1 cut(s) | 285 |
| TaaI | ACNGT | 1 cut(s) | 67 |
| TaqI | TCGA | 1 cut(s) | 218 |
| TasI | AATT | 6 cut(s) | 23, 56, 152, 293, 323, 335 |
| Tru1I | TTAA | 3 cut(s) | 21, 102, 346 |
| Tru9I | TTAA | 3 cut(s) | 21, 102, 346 |
| TscAI | CASTG | 1 cut(s) | 72 |
| TspDTI | ATGAA | 3 cut(s) | 87, 217, 252 |
| TspGWI | ACGGA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 72 |
| XapI | RAATTY | 3 cut(s) | 23, 56, 335 |
| XceI | RCATGY | 1 cut(s) | 278 |
| XmnI | GAANNNNTTC | 1 cut(s) | 224 |