TdcA1-ORF2 protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 131, 148 |
| AcsI | RAATTY | 2 cut(s) | 143, 455 |
| AcuI | CTGAAG | 4 cut(s) | 234, 399, 407, 437 |
| AflIII | ACRYGT | 1 cut(s) | 84 |
| AgsI | TTSAA | 3 cut(s) | 29, 56, 410 |
| AluBI | AGCT | 2 cut(s) | 35, 464 |
| AluI | AGCT | 2 cut(s) | 35, 464 |
| Alw26I | GTCTC | 1 cut(s) | 93 |
| ApoI | RAATTY | 2 cut(s) | 143, 455 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 344 |
| AsuHPI | GGTGA | 1 cut(s) | 314 |
| BauI | CACGAG | 1 cut(s) | 198 |
| BcoDI | GTCTC | 1 cut(s) | 93 |
| BfaI | CTAG | 1 cut(s) | 264 |
| BfmI | CTRYAG | 1 cut(s) | 151 |
| BglII | AGATCT | 1 cut(s) | 374 |
| BisI | GCNGC | 1 cut(s) | 132 |
| BlsI | GCNGC | 1 cut(s) | 133 |
| BmsI | GCATC | 1 cut(s) | 415 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 164, 196 |
| BpuEI | CTTGAG | 1 cut(s) | 213 |
| BsaAI | YACGTR | 1 cut(s) | 112 |
| BsaJI | CCNNGG | 1 cut(s) | 95 |
| Bse1I | ACTGG | 1 cut(s) | 66 |
| BseDI | CCNNGG | 1 cut(s) | 95 |
| BseGI | GGATG | 1 cut(s) | 430 |
| BseNI | ACTGG | 1 cut(s) | 66 |
| BsmAI | GTCTC | 1 cut(s) | 93 |
| BsmI | GAATGC | 2 cut(s) | 298, 441 |
| Bsp143I | GATC | 2 cut(s) | 279, 374 |
| BspACI | CCGC | 2 cut(s) | 131, 148 |
| BsrI | ACTGG | 1 cut(s) | 66 |
| BssECI | CCNNGG | 1 cut(s) | 95 |
| BssMI | GATC | 2 cut(s) | 279, 374 |
| BssSI | CACGAG | 1 cut(s) | 198 |
| BssT1I | CCWWGG | 1 cut(s) | 95 |
| Bst2BI | CACGAG | 1 cut(s) | 198 |
| Bst4CI | ACNGT | 1 cut(s) | 187 |
| Bst6I | CTCTTC | 2 cut(s) | 96, 264 |
| BstBAI | YACGTR | 1 cut(s) | 112 |
| BstC8I | GCNNGC | 1 cut(s) | 396 |
| BstDEI | CTNAG | 1 cut(s) | 45 |
| BstF5I | GGATG | 1 cut(s) | 430 |
| BstKTI | GATC | 2 cut(s) | 282, 377 |
| BstMAI | GTCTC | 1 cut(s) | 93 |
| BstMBI | GATC | 2 cut(s) | 279, 374 |
| BstNSI | RCATGY | 2 cut(s) | 88, 398 |
| BstSFI | CTRYAG | 1 cut(s) | 151 |
| BstSNI | TACGTA | 1 cut(s) | 112 |
| BstX2I | RGATCY | 1 cut(s) | 374 |
| BstYI | RGATCY | 1 cut(s) | 374 |
| BtsCI | GGATG | 1 cut(s) | 430 |
| BtsIMutI | CAGTG | 1 cut(s) | 192 |
| Cac8I | GCNNGC | 1 cut(s) | 396 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 314, 349 |
| CviAII | CATG | 3 cut(s) | 85, 356, 395 |
| CviJI | RGCY | 4 cut(s) | 35, 157, 211, 464 |
| CviKI_1 | RGCY | 4 cut(s) | 35, 157, 211, 464 |
| DdeI | CTNAG | 1 cut(s) | 45 |
| DpnI | GATC | 2 cut(s) | 281, 376 |
| DpnII | GATC | 2 cut(s) | 279, 374 |
| Eam1104I | CTCTTC | 2 cut(s) | 96, 264 |
| EarI | CTCTTC | 2 cut(s) | 96, 264 |
| Eco105I | TACGTA | 1 cut(s) | 112 |
| Eco130I | CCWWGG | 1 cut(s) | 95 |
| Eco57I | CTGAAG | 4 cut(s) | 234, 399, 407, 437 |
| EcoT14I | CCWWGG | 1 cut(s) | 95 |
| ErhI | CCWWGG | 1 cut(s) | 95 |
| FaeI | CATG | 3 cut(s) | 88, 359, 398 |
| FaiI | YATR | 7 cut(s) | 86, 128, 153, 319, 350, 357, 396 |
| FatI | CATG | 3 cut(s) | 84, 355, 394 |
| Fnu4HI | GCNGC | 1 cut(s) | 132 |
| FokI | GGATG | 1 cut(s) | 437 |
| Fsp4HI | GCNGC | 1 cut(s) | 132 |
| FspBI | CTAG | 1 cut(s) | 264 |
| GluI | GCNGC | 1 cut(s) | 132 |
| Hin1II | CATG | 3 cut(s) | 88, 359, 398 |
| HphI | GGTGA | 1 cut(s) | 314 |
| Hpy166II | GTNNAC | 2 cut(s) | 115, 190 |
| Hpy188I | TCNGA | 1 cut(s) | 379 |
| Hpy188III | TCNNGA | 2 cut(s) | 103, 264 |
| Hpy8I | GTNNAC | 2 cut(s) | 115, 190 |
| HpyAV | CCTTC | 2 cut(s) | 382, 412 |
| HpyCH4III | ACNGT | 1 cut(s) | 187 |
| HpyCH4IV | ACGT | 1 cut(s) | 111 |
| HpyCH4V | TGCA | 3 cut(s) | 310, 439, 452 |
| HpyF3I | CTNAG | 1 cut(s) | 45 |
| HpySE526I | ACGT | 1 cut(s) | 111 |
| Hsp92II | CATG | 3 cut(s) | 88, 359, 398 |
| Kzo9I | GATC | 2 cut(s) | 279, 374 |
| LmnI | GCTCC | 1 cut(s) | 391 |
| LpnPI | CCDG | 3 cut(s) | 45, 79, 225 |
| LweI | GCATC | 1 cut(s) | 415 |
| MaeI | CTAG | 1 cut(s) | 264 |
| MaeII | ACGT | 1 cut(s) | 111 |
| MaeIII | GTNAC | 2 cut(s) | 40, 273 |
| MalI | GATC | 2 cut(s) | 281, 376 |
| MboI | GATC | 2 cut(s) | 279, 374 |
| MboII | GAAGA | 5 cut(s) | 83, 281, 371, 392, 422 |
| MflI | RGATCY | 1 cut(s) | 374 |
| MluCI | AATT | 3 cut(s) | 143, 443, 455 |
| MnlI | CCTC | 1 cut(s) | 415 |
| MroXI | GAANNNNTTC | 1 cut(s) | 344 |
| MseI | TTAA | 3 cut(s) | 81, 222, 466 |
| MslI | CAYNNNNRTG | 3 cut(s) | 83, 327, 360 |
| Mva1269I | GAATGC | 2 cut(s) | 298, 441 |
| NdeII | GATC | 2 cut(s) | 279, 374 |
| NlaIII | CATG | 3 cut(s) | 88, 359, 398 |
| NmuCI | GTSAC | 1 cut(s) | 40 |
| NspI | RCATGY | 2 cut(s) | 88, 398 |
| PaeI | GCATGC | 1 cut(s) | 398 |
| PciI | ACATGT | 1 cut(s) | 84 |
| PctI | GAATGC | 2 cut(s) | 298, 441 |
| PdmI | GAANNNNTTC | 1 cut(s) | 344 |
| PkrI | GCNGC | 1 cut(s) | 133 |
| Ppu21I | YACGTR | 1 cut(s) | 112 |
| PscI | ACATGT | 1 cut(s) | 84 |
| PsuI | RGATCY | 1 cut(s) | 374 |
| RseI | CAYNNNNRTG | 3 cut(s) | 83, 327, 360 |
| SaqAI | TTAA | 3 cut(s) | 81, 222, 466 |
| SatI | GCNGC | 1 cut(s) | 132 |
| Sau3AI | GATC | 2 cut(s) | 279, 374 |
| SetI | ASST | 3 cut(s) | 37, 114, 466 |
| SfaNI | GCATC | 1 cut(s) | 415 |
| SfcI | CTRYAG | 1 cut(s) | 151 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 83, 327, 360 |
| SmlI | CTYRAG | 1 cut(s) | 228 |
| SmoI | CTYRAG | 1 cut(s) | 228 |
| SnaBI | TACGTA | 1 cut(s) | 112 |
| SphI | GCATGC | 1 cut(s) | 398 |
| Sse9I | AATT | 3 cut(s) | 143, 443, 455 |
| SsiI | CCGC | 2 cut(s) | 131, 148 |
| SspI | AATATT | 1 cut(s) | 405 |
| SspMI | CTAG | 1 cut(s) | 264 |
| StyI | CCWWGG | 1 cut(s) | 95 |
| TaaI | ACNGT | 1 cut(s) | 187 |
| TaiI | ACGT | 1 cut(s) | 114 |
| TaqI | TCGA | 2 cut(s) | 75, 338 |
| TasI | AATT | 3 cut(s) | 143, 443, 455 |
| TauI | GCSGC | 1 cut(s) | 134 |
| Tru1I | TTAA | 3 cut(s) | 81, 222, 466 |
| Tru9I | TTAA | 3 cut(s) | 81, 222, 466 |
| TscAI | CASTG | 1 cut(s) | 192 |
| TseFI | GTSAC | 1 cut(s) | 40 |
| Tsp45I | GTSAC | 1 cut(s) | 40 |
| TspDTI | ATGAA | 3 cut(s) | 17, 337, 372 |
| TspRI | CASTG | 1 cut(s) | 192 |
| XapI | RAATTY | 2 cut(s) | 143, 455 |
| XbaI | TCTAGA | 1 cut(s) | 263 |
| XceI | RCATGY | 2 cut(s) | 88, 398 |
| XmnI | GAANNNNTTC | 1 cut(s) | 344 |
| XspI | CTAG | 1 cut(s) | 264 |