Rorug01G0198000

Cyclin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0014600
Physical Location & Seq
Reverse (-)
27743582 .. 27745609
2028 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0198000.1

Sequence Viewer

Length: 2028 bp
ATGAAAGCCATTACTCCCCTTTTTCGCCGTTTTTCGAAAGCCAAAGAATCACAAGCTTTGATATCATTAATTGGATGTTCCACTCAAGACCCAACTCTTGCAAAACAAGTATTTGGTAAATTATTGGATCAATACCCAGGTAGCATTACATTGAGGAAACTCTATGCAAGCTTTATTGTCAATGAGAATCTCCACGGCGACGCTTCACTAGGTGTCAAGTTCATGAGAGCTTATGCTGCTTGTGGTGAACCCAGAATGGCGCGCTGTATATTCGATCGAATTCCTGATAAGAATGTCATCTTTTGTAATGTCATGATCAGAAGCTATGTGAATAACCGTTTGTACCATGATGCTCTTGTTTTGTACAAAACTATGTCTGCCATTGGGTTTGATCCTGATAACTATACGTACCCTTGTGTCCTCAAGGCTTGTTCGGGGTCGGATAATTTGTGGGTGGGGTTGCAAATTCATGTTGCTGTTGTGAAAGTTGGGCTTGATCGGAATTTGTTTATTGGGAATGGTCTGATTGCCATGTATGGGAAATGCGGTTGTTTGGTGGAGGCTCGGCGCGTTTTTGCTGAGATGCCATGTAGAGATGTGGTTTCGTGTAATTCTATGGTAGCTGGGTATGCACAAAATGAACGGTTCAATGATGCACTAGATGTTTGTAGGAAAATGAAGACATTGGGGCTTAAACCAGATGCTGGTACCATGGCTAGCCTATTCCCAGCTGTGACCAACACTTCATCTGAGAATGTTTCGTATGTTAAGGAAATGTTTATGAAATTGGATAAACAGAGTTTGGTTTCGTGGAATGTGATGATAGCAGTGTATGTGAATAATTCGATGCCTGGTGAGGCAGTTGACCTTTTCTTACAGATGGAGGAAAGTGGAATAGAGCCTGATGCAGTCACAATTGCAAGTGTTCTCCCCGCTTGTGGGGATCTTTCTGCTTTGTTGCTAGGGAGGCGGATTCATAAATATGTTGAGAGAAAGAGACTTGGGCCAAATTTGTTATTGGAGAATGCATTGATTGACATGTATGCTAAGTGTGGATGTTTACGAGATGCAAGAGAAGTCTTTGATGCGATGACATTTCAGGATGTTGTCTCGTGGACTTCCATGATGTCTGCATATGGTAGGAGTGGACAAGGTCATGACGCTGTGGCACTTTTTGTGAAAATGCGTGACTCAGGTGTAGTTCCTGATTCAATTGCATTTGTATCAGTTCTCGCGGCTTGCAGCCATGCGGGATTGTTGGAGGAAGGACAATATTACTTTAAATTGATGACTGAGGAGTACGGCATTGATCCTAGGATAGAGCACTGTGCTTGTTTGGTAGATCTGTTGGGGCGTGCTGGAAGAGTGGACGAGGCTTATAGTTTTGTCAAACAGATGCCACTGGAGCCTAATGAAAGAGTATGGGGTGCTCTACTTAGTGCTTGCCGGGTATACTCTAACATGAGTGTAGGACTTTTAGTCGCTGATTGCCTTTTTCAATTGGCTCCAGAGGAATCGGGTTATTATGTTTTGTTATCAAACATCTATGCAAAAGCTGGTAAATGGCAAGATGTCACCGCAGTCCGGTCAGTGATGAAGAGTAGAGGAATCAAGAAAATACCAGGTGTCAGCAATGTTGAACTCAAAGACCAGGTTCACACTTTTCTTGCTGGTGACAGATCACATCCTCAGTCTAAAGTGATCTATGAAGAATTAGATATATTGGTTGGGAAAATGAAGGAGTTAGGTTATGTCCCTGAGACCGATTCTGCTCTTCATGACGTGGAGGAGGAGGAGAAGGAATGCCATCTTGCAGTTCACAGTGAGAAGCTGGCAATTGTGTTTGCCATTCTGCATACTGAGCGAGGGGCAGTGATCAGAATTACCAAAAATCTTCGTGTTTGTAGTGATTGCCATATTGCTGCTAAGCTAATCTCTAAAATAGCTGAACGTGAAATTGTTGTCAGGGATACTAATCGTTTCCACCATTTTAAGGATGGCACATGTTCTTGCGGGGACTATTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cyclin

Protein Analysis

675

Amino Acids

75.06

Weight (kDa)

6.76

Isoelectric Point (pI)

41.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 97 - 144 4.3e-09 PPR repeat family
PPR_2 PF13041 198 - 243 1.6e-08 PPR repeat family
PPR_2 PF13041 268 - 313 8.6e-10 PPR repeat family
PPR PF01535 269 - 299 6.1e-07 PPR repeat
PPR_2 PF13041 368 - 415 5.9e-10 PPR repeat family
PPR PF01535 370 - 400 1.2e-07 PPR repeat
E_motif PF20431 485 - 547 6.3e-19 E motif
Eplus_motif PF20430 552 - 576 1.2e-09 E+ motif
DYW_deaminase PF14432 583 - 675 6.3e-43 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014600)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G45080
fragaria_vesca FvH4_7g10850
malus_domestica MD07G1113400.v1.1
prunus_persica Prupe.2G136400_v2.0.a1 Prupe.2G136400_v2.0.a1
pyrus_communis pycom07g09810
rosa_chinensis RchiOBHm_Chr1g0348831
rosa_laevigata RLG00000028623
rosa_multiflora Rmu_sc0032387.1_g000001
rosa_roxburghii Rroxscaffold_4G00306550
rosa_rugosa Rorug01G0198000
rosa_samantha Rh1AG215400 Rh1BG181800 Rh1CG199900 Rh1DG211600
rosa_wichuraiana Rw1G018250 Rw1G018360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 707
AccB1I GGYRCC 1 cut(s) 707
AccB7I CCANNNNNTGG 1 cut(s) 704
AccI GTMKAC 1 cut(s) 1452
AccII CGCG 3 cut(s) 262, 570, 1235
AciI CCGC 7 cut(s) 546, 933, 970, 1235, 1250, 1578, 2013
AclWI GGATC 4 cut(s) 135, 386, 951, 1304
AcsI RAATTY 4 cut(s) 279, 465, 502, 1009
AdeI CACNNNGTG 1 cut(s) 212
AfaI GTAC 5 cut(s) 344, 365, 410, 709, 1301
AfiI CCNNNNNNNGG 6 cut(s) 537, 704, 938, 939, 1584, 1993
AflIII ACRYGT 2 cut(s) 1038, 2003
AgsI TTSAA 4 cut(s) 649, 1212, 1499, 1640
AhdI GACNNNNNGTC 1 cut(s) 1478
AjiI CACGTC 1 cut(s) 1783
AjnI CCWGG 4 cut(s) 136, 850, 1621, 1650
Alw21I GWGCWC 2 cut(s) 1326, 1432
Alw26I GTCTC 3 cut(s) 991, 1114, 1754
AlwI GGATC 4 cut(s) 135, 386, 951, 1304
AlwNI CAGNNNCTG 1 cut(s) 704
AoxI GGCC 1 cut(s) 1004
ApeKI GCWGC 3 cut(s) 236, 1242, 1922
ApoI RAATTY 4 cut(s) 279, 465, 502, 1009
AseI ATTAAT 1 cut(s) 68
Asp718I GGTACC 1 cut(s) 707
AspA2I CCTAGG 1 cut(s) 1313
AspLEI GCGC 3 cut(s) 262, 264, 570
AspS9I GGNCC 1 cut(s) 1004
AsuC2I CCSGG 1 cut(s) 1448
AsuHPI GGTGA 4 cut(s) 257, 866, 1567, 1685
AsuII TTCGAA 1 cut(s) 35
AsuNHI GCTAGC 1 cut(s) 716
AvrII CCTAGG 1 cut(s) 1313
BanI GGYRCC 1 cut(s) 707
BauI CACGAG 1 cut(s) 1111
BbsI GAAGAC 1 cut(s) 686
Bbv12I GWGCWC 2 cut(s) 1326, 1432
BbvI GCAGC 3 cut(s) 223, 1254, 1909
BccI CCATC 3 cut(s) 874, 1815, 1991
BceAI ACGGC 3 cut(s) 12, 211, 1318
BciT130I CCWGG 4 cut(s) 138, 852, 1623, 1652
BciVI GTATCC 1 cut(s) 1963
BclI TGATCA 2 cut(s) 315, 1875
BcnI CCSGG 1 cut(s) 1448
BcoDI GTCTC 3 cut(s) 991, 1114, 1754
BfaI CTAG 5 cut(s) 209, 659, 717, 962, 1314
BfuI GTATCC 1 cut(s) 1963
BglII AGATCT 1 cut(s) 1342
BisI GCNGC 4 cut(s) 237, 1236, 1243, 1923
BlnI CCTAGG 1 cut(s) 1313
BlpI GCTNAGC 1 cut(s) 1926
BlsI GCNGC 4 cut(s) 238, 1237, 1244, 1924
Bme1390I CCNGG 5 cut(s) 138, 852, 1448, 1623, 1652
BmeRI GACNNNNNGTC 1 cut(s) 1478
BmgBI CACGTC 1 cut(s) 1783
BmgT120I GGNCC 1 cut(s) 1004
BmiI GGNNCC 3 cut(s) 709, 1407, 1506
BmrFI CCNGG 5 cut(s) 138, 852, 1448, 1623, 1652
BmsI GCATC 9 cut(s) 340, 573, 643, 691, 837, 895, 1057, 1075, 1386
BmtI GCTAGC 1 cut(s) 720
BpiI GAAGAC 1 cut(s) 686
BpmI CTGGAG 2 cut(s) 1424, 1491
Bpu1102I GCTNAGC 1 cut(s) 1926
Bpu14I TTCGAA 1 cut(s) 35
BpuEI CTTGAG 2 cut(s) 69, 407
BpuMI CCSGG 1 cut(s) 1448
BsaAI YACGTR 1 cut(s) 408
BsaBI GATNNNNATC 1 cut(s) 1974
BsaI GGTCTC 1 cut(s) 1754
BsaJI CCNNGG 4 cut(s) 136, 193, 711, 1313
BsaWI WCCGGW 1 cut(s) 1584
Bsc4I CCNNNNNNNGG 6 cut(s) 537, 704, 938, 939, 1584, 1993
Bse1I ACTGG 1 cut(s) 1407
Bse3DI GCAATG 1 cut(s) 1639
Bse8I GATNNNNATC 1 cut(s) 1974
BseBI CCWGG 4 cut(s) 138, 852, 1623, 1652
BseDI CCNNGG 4 cut(s) 136, 193, 711, 1313
BseGI GGATG 5 cut(s) 80, 1061, 1108, 1684, 2002
BseJI GATNNNNATC 1 cut(s) 1974
BseLI CCNNNNNNNGG 6 cut(s) 537, 704, 938, 939, 1584, 1993
BseMI GCAATG 1 cut(s) 1639
BseMII CTCAG 7 cut(s) 570, 741, 1206, 1284, 1703, 1749, 1851
BseNI ACTGG 1 cut(s) 1407
BsePI GCGCGC 1 cut(s) 260
BseRI GAGGAG 4 cut(s) 1310, 1802, 1805, 1808
BseXI GCAGC 3 cut(s) 223, 1254, 1909
BseYI CCCAGC 2 cut(s) 623, 727
Bsh1236I CGCG 3 cut(s) 262, 570, 1235
Bsh1285I CGRYCG 1 cut(s) 277
BshFI GGCC 1 cut(s) 1006
BshNI GGYRCC 1 cut(s) 707
BsiEI CGRYCG 1 cut(s) 277
BsiHKAI GWGCWC 2 cut(s) 1326, 1432
BsiSI CCGG 2 cut(s) 1447, 1585
BslFI GGGAC 1 cut(s) 1739
BslI CCNNNNNNNGG 6 cut(s) 537, 704, 938, 939, 1584, 1993
BsmAI GTCTC 3 cut(s) 991, 1114, 1754
BsmFI GGGAC 1 cut(s) 1739
BsmI GAATGC 2 cut(s) 1030, 1808
BsnI GGCC 1 cut(s) 1006
Bso31I GGTCTC 1 cut(s) 1754
Bsp119I TTCGAA 1 cut(s) 35
Bsp1286I GDGCHC 2 cut(s) 1326, 1432
Bsp1407I TGTACA 1 cut(s) 363
Bsp1720I GCTNAGC 1 cut(s) 1926
Bsp19I CCATGG 1 cut(s) 711
BspACI CCGC 7 cut(s) 546, 933, 970, 1235, 1250, 1578, 2013
BspANI GGCC 1 cut(s) 1006
BspCNI CTCAG 7 cut(s) 571, 742, 1205, 1285, 1702, 1750, 1852
BspFNI CGCG 3 cut(s) 262, 570, 1235
BspHI TCATGA 4 cut(s) 222, 312, 1156, 1777
BspLI GGNNCC 3 cut(s) 709, 1407, 1506
BspOI GCTAGC 1 cut(s) 720
BspPI GGATC 4 cut(s) 135, 386, 951, 1304
BspQI GCTCTTC 1 cut(s) 1779
BspT104I TTCGAA 1 cut(s) 35
BspT107I GGYRCC 1 cut(s) 707
BspTNI GGTCTC 1 cut(s) 1754
BsrDI GCAATG 1 cut(s) 1639
BsrGI TGTACA 1 cut(s) 363
BsrI ACTGG 1 cut(s) 1407
BssECI CCNNGG 4 cut(s) 136, 193, 711, 1313
BssHII GCGCGC 1 cut(s) 260
BssNAI GTATAC 1 cut(s) 1453
BssSI CACGAG 1 cut(s) 1111
BssT1I CCWWGG 2 cut(s) 711, 1313
Bst1107I GTATAC 1 cut(s) 1453
Bst2BI CACGAG 1 cut(s) 1111
Bst2UI CCWGG 4 cut(s) 138, 852, 1623, 1652
Bst4CI ACNGT 4 cut(s) 338, 645, 1328, 1823
Bst6I CTCTTC 3 cut(s) 1357, 1592, 1779
BstAUI TGTACA 1 cut(s) 363
BstBAI YACGTR 1 cut(s) 408
BstBI TTCGAA 1 cut(s) 35
BstC8I GCNNGC 7 cut(s) 169, 262, 718, 1240, 1356, 1444, 1833
BstDSI CCRYGG 2 cut(s) 193, 711
BstF5I GGATG 5 cut(s) 80, 1061, 1108, 1684, 2002
BstFNI CGCG 3 cut(s) 262, 570, 1235
BstHHI GCGC 3 cut(s) 262, 264, 570
BstMAI GTCTC 3 cut(s) 991, 1114, 1754
BstMCI CGRYCG 1 cut(s) 277
BstMWI GCNNNNNNNGC 5 cut(s) 236, 629, 967, 1405, 1861
BstNI CCWGG 4 cut(s) 138, 852, 1623, 1652
BstNSI RCATGY 2 cut(s) 1042, 2007
BstSCI CCNGG 5 cut(s) 136, 850, 1446, 1621, 1650
BstSNI TACGTA 1 cut(s) 408
BstUI CGCG 3 cut(s) 262, 570, 1235
BstV1I GCAGC 3 cut(s) 223, 1254, 1909
BstV2I GAAGAC 1 cut(s) 686
BstX2I RGATCY 2 cut(s) 943, 1342
BstYI RGATCY 2 cut(s) 943, 1342
BstZ17I GTATAC 1 cut(s) 1453
BsuI GTATCC 1 cut(s) 1963
BsuRI GGCC 1 cut(s) 1006
BtgI CCRYGG 2 cut(s) 193, 711
BtgZI GCGATG 1 cut(s) 1103
BtrI CACGTC 1 cut(s) 1783
BtsCI GGATG 5 cut(s) 80, 1061, 1108, 1684, 2002
BtsI GCAGTG 2 cut(s) 834, 1878
BtsIMutI CAGTG 6 cut(s) 834, 1324, 1400, 1596, 1828, 1878
Cac8I GCNNGC 7 cut(s) 169, 262, 718, 1240, 1356, 1444, 1833
CaiI CAGNNNCTG 1 cut(s) 704
CciI TCATGA 4 cut(s) 222, 312, 1156, 1777
CfoI GCGC 3 cut(s) 262, 264, 570
Cfr13I GGNCC 1 cut(s) 1004
CseI GACGC 2 cut(s) 209, 1169
CsiI ACCWGGT 2 cut(s) 1621, 1650
Csp6I GTAC 5 cut(s) 343, 364, 409, 708, 1300
CviQI GTAC 5 cut(s) 343, 364, 409, 708, 1300
DraI TTTAAA 1 cut(s) 1282
DraIII CACNNNGTG 1 cut(s) 212
DriI GACNNNNNGTC 1 cut(s) 1478
Eam1104I CTCTTC 3 cut(s) 1357, 1592, 1779
Eam1105I GACNNNNNGTC 1 cut(s) 1478
EarI CTCTTC 3 cut(s) 1357, 1592, 1779
EciI GGCGGA 1 cut(s) 985
Eco105I TACGTA 1 cut(s) 408
Eco130I CCWWGG 2 cut(s) 711, 1313
Eco31I GGTCTC 1 cut(s) 1754
Eco32I GATATC 1 cut(s) 63
EcoRI GAATTC 1 cut(s) 279
EcoRII CCWGG 4 cut(s) 136, 850, 1621, 1650
EcoRV GATATC 1 cut(s) 63
EcoT14I CCWWGG 2 cut(s) 711, 1313
EcoT22I ATGCAT 1 cut(s) 1030
ErhI CCWWGG 2 cut(s) 711, 1313
FalI AAGNNNNNCTT 2 cut(s) 477, 509
FaqI GGGAC 1 cut(s) 1739
FauI CCCGC 3 cut(s) 940, 1243, 2006
FauNDI CATATG 1 cut(s) 1135
FbaI TGATCA 2 cut(s) 315, 1875
FblI GTMKAC 1 cut(s) 1452
Fnu4HI GCNGC 4 cut(s) 237, 1236, 1243, 1923
FokI GGATG 5 cut(s) 87, 1068, 1115, 1671, 2009
Fsp4HI GCNGC 4 cut(s) 237, 1236, 1243, 1923
FspBI CTAG 5 cut(s) 209, 659, 717, 962, 1314
GlaI GCGC 3 cut(s) 261, 263, 569
GluI GCNGC 4 cut(s) 237, 1236, 1243, 1923
GsaI CCCAGC 2 cut(s) 627, 731
GsuI CTGGAG 2 cut(s) 1424, 1491
HaeIII GGCC 1 cut(s) 1006
HapII CCGG 2 cut(s) 1447, 1585
HgaI GACGC 2 cut(s) 209, 1169
HhaI GCGC 3 cut(s) 262, 264, 570
Hin6I GCGC 3 cut(s) 260, 262, 568
HinP1I GCGC 3 cut(s) 260, 262, 568
HincII GTYRAC 1 cut(s) 865
HindII GTYRAC 1 cut(s) 865
HindIII AAGCTT 2 cut(s) 54, 169
HinfI GANTC 8 cut(s) 47, 187, 973, 1190, 1208, 1514, 1608, 1766
HpaII CCGG 2 cut(s) 1447, 1585
HphI GGTGA 4 cut(s) 257, 866, 1567, 1685
Hpy166II GTNNAC 9 cut(s) 248, 865, 1061, 1116, 1148, 1369, 1453, 1657, 1819
Hpy188I TCNGA 6 cut(s) 320, 442, 501, 525, 751, 1880
Hpy8I GTNNAC 9 cut(s) 248, 865, 1061, 1116, 1148, 1369, 1453, 1657, 1819
Hpy99I CGWCG 1 cut(s) 203
HpyAV CCTTC 3 cut(s) 1259, 1732, 1792
HpyCH4III ACNGT 4 cut(s) 338, 645, 1328, 1823
HpyCH4IV ACGT 3 cut(s) 407, 1782, 1951
HpyF10VI GCNNNNNNNGC 5 cut(s) 236, 629, 967, 1405, 1861
HpySE526I ACGT 3 cut(s) 407, 1782, 1951
HspAI GCGC 3 cut(s) 260, 262, 568
KpnI GGTACC 1 cut(s) 711
Ksp22I TGATCA 2 cut(s) 315, 1875
LguI GCTCTTC 1 cut(s) 1779
LmnI GCTCC 2 cut(s) 1405, 1510
Lsp1109I GCAGC 3 cut(s) 223, 1254, 1909
LweI GCATC 9 cut(s) 340, 573, 643, 691, 837, 895, 1057, 1075, 1386
MabI ACCWGGT 2 cut(s) 1621, 1650
MaeI CTAG 5 cut(s) 209, 659, 717, 962, 1314
MaeII ACGT 3 cut(s) 407, 1782, 1951
MaeIII GTNAC 5 cut(s) 733, 910, 1187, 1573, 1673
MboII GAAGA 6 cut(s) 691, 1374, 1609, 1721, 1766, 1886
MfeI CAATTG 4 cut(s) 915, 1212, 1499, 1836
MflI RGATCY 2 cut(s) 943, 1342
MhlI GDGCHC 2 cut(s) 1326, 1432
MlyI GAGTC 1 cut(s) 1184
MmeI TCCRAC 2 cut(s) 420, 1239
Mph1103I ATGCAT 1 cut(s) 1030
MseI TTAA 5 cut(s) 68, 693, 768, 1281, 1992
MslI CAYNNNNRTG 1 cut(s) 981
MspA1I CMGCKG 1 cut(s) 731
MspI CCGG 2 cut(s) 1447, 1585
MspR9I CCNGG 5 cut(s) 138, 852, 1448, 1623, 1652
MunI CAATTG 4 cut(s) 915, 1212, 1499, 1836
Mva1269I GAATGC 2 cut(s) 1030, 1808
MvaI CCWGG 4 cut(s) 138, 852, 1623, 1652
MvnI CGCG 3 cut(s) 262, 570, 1235
MwoI GCNNNNNNNGC 5 cut(s) 236, 629, 967, 1405, 1861
NciI CCSGG 1 cut(s) 1448
NcoI CCATGG 1 cut(s) 711
NdeI CATATG 1 cut(s) 1135
NheI GCTAGC 1 cut(s) 716
NlaIV GGNNCC 3 cut(s) 709, 1407, 1506
NmeAIII GCCGAG 1 cut(s) 544
NmuCI GTSAC 5 cut(s) 733, 910, 1187, 1573, 1673
NsiI ATGCAT 1 cut(s) 1030
NspI RCATGY 2 cut(s) 1042, 2007
NspV TTCGAA 1 cut(s) 35
PagI TCATGA 4 cut(s) 222, 312, 1156, 1777
PauI GCGCGC 1 cut(s) 260
PciI ACATGT 2 cut(s) 1038, 2003
PciSI GCTCTTC 1 cut(s) 1779
PctI GAATGC 2 cut(s) 1030, 1808
PfeI GAWTC 7 cut(s) 47, 187, 973, 1208, 1514, 1608, 1766
PflFI GACNNNGTC 1 cut(s) 1152
PflMI CCANNNNNTGG 1 cut(s) 704
PkrI GCNGC 4 cut(s) 238, 1237, 1244, 1924
Ple19I CGATCG 1 cut(s) 277
PleI GAGTC 1 cut(s) 1184
PpsI GAGTC 1 cut(s) 1184
Ppu21I YACGTR 1 cut(s) 408
PscI ACATGT 2 cut(s) 1038, 2003
PshBI ATTAAT 1 cut(s) 68
Psp6I CCWGG 4 cut(s) 136, 850, 1621, 1650
PspFI CCCAGC 2 cut(s) 623, 727
PspGI CCWGG 4 cut(s) 136, 850, 1621, 1650
PspN4I GGNNCC 3 cut(s) 709, 1407, 1506
PspPI GGNCC 1 cut(s) 1004
PstNI CAGNNNCTG 1 cut(s) 704
PsuI RGATCY 2 cut(s) 943, 1342
PsyI GACNNNGTC 1 cut(s) 1152
PteI GCGCGC 1 cut(s) 260
PvuI CGATCG 1 cut(s) 277
PvuII CAGCTG 1 cut(s) 731
RsaI GTAC 5 cut(s) 344, 365, 410, 709, 1301
RsaNI GTAC 5 cut(s) 343, 364, 409, 708, 1300
RseI CAYNNNNRTG 1 cut(s) 981
SapI GCTCTTC 1 cut(s) 1779
SaqAI TTAA 5 cut(s) 68, 693, 768, 1281, 1992
SatI GCNGC 4 cut(s) 237, 1236, 1243, 1923
Sau96I GGNCC 1 cut(s) 1004
SchI GAGTC 1 cut(s) 1184
ScrFI CCNGG 5 cut(s) 138, 852, 1448, 1623, 1652
SduI GDGCHC 2 cut(s) 1326, 1432
SexAI ACCWGGT 2 cut(s) 1621, 1650
SfaNI GCATC 9 cut(s) 340, 573, 643, 691, 837, 895, 1057, 1075, 1386
SfuI TTCGAA 1 cut(s) 35
SmiMI CAYNNNNRTG 1 cut(s) 981
SmlI CTYRAG 2 cut(s) 84, 422
SmoI CTYRAG 2 cut(s) 84, 422
SnaBI TACGTA 1 cut(s) 408
SsiI CCGC 7 cut(s) 546, 933, 970, 1235, 1250, 1578, 2013
SspI AATATT 1 cut(s) 1274
SspMI CTAG 5 cut(s) 209, 659, 717, 962, 1314
StyD4I CCNGG 5 cut(s) 136, 850, 1446, 1621, 1650
StyI CCWWGG 2 cut(s) 711, 1313
TaaI ACNGT 4 cut(s) 338, 645, 1328, 1823
TaiI ACGT 3 cut(s) 410, 1785, 1954
TaqI TCGA 4 cut(s) 35, 273, 277, 845
TaqII GACCGA 1 cut(s) 1778
TatI WGTACW 1 cut(s) 363
TauI GCSGC 1 cut(s) 1238
TfiI GAWTC 7 cut(s) 47, 187, 973, 1208, 1514, 1608, 1766
Tru1I TTAA 5 cut(s) 68, 693, 768, 1281, 1992
Tru9I TTAA 5 cut(s) 68, 693, 768, 1281, 1992
TscAI CASTG 6 cut(s) 834, 1331, 1407, 1596, 1828, 1878
TseFI GTSAC 5 cut(s) 733, 910, 1187, 1573, 1673
TseI GCWGC 3 cut(s) 236, 1242, 1922
Tsp45I GTSAC 5 cut(s) 733, 910, 1187, 1573, 1673
TspRI CASTG 6 cut(s) 834, 1331, 1407, 1596, 1828, 1878
Tth111I GACNNNGTC 1 cut(s) 1152
Van91I CCANNNNNTGG 1 cut(s) 704
VspI ATTAAT 1 cut(s) 68
XapI RAATTY 4 cut(s) 279, 465, 502, 1009
XceI RCATGY 2 cut(s) 1042, 2007
XcmI CCANNNNNNNNNTGG 1 cut(s) 1994
XmaJI CCTAGG 1 cut(s) 1313
XmiI GTMKAC 1 cut(s) 1452
XspI CTAG 5 cut(s) 209, 659, 717, 962, 1314
Zsp2I ATGCAT 1 cut(s) 1030
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.