Rorug01G0281300

membrane protein At1g16860-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0012153
Physical Location & Seq
Reverse (-)
39433956 .. 39440099
6144 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0281300.1

Sequence Viewer

Length: 2088 bp
ATGGCGACAGATATGCAGAGGTTAATTGGGACGAGTGAAGAAGATGATGAGGAAGAAATGGACATGGATGTGAAAGAAGAGGGAGATGGTGATGATGACGAAGATGTTGAGAAGCATGTTGATGCGAGCCCGATGATGATCGGGGTTGATGGAGGGATGGTAACAAGTAGTAGTAATAATAACCGGTTTCAACAGCACCAGCAAATGCAAGAAGTGGGGACCCCTGGTGGGGGAGGAGCTAGGAGGTGTAGACCGTTAGAAGAGAAAGAGAGAACCAAGATAAGAGAGCGGCAGCGCAGGGCGATCACTGCAAAGATCTTAGCAGGGCTACGGAGGCATGGAAATTATAATCTCAGAGTCAGGGCTGATATCAATGATGTAATTGCGGCTTTGGCTAGGGAAGCTGGCTGGGTTGTTCTTCCGGATGGAACCACTTATCCTTCAAACTCTCAGGGCCCAAGGCCTGCTGGTGTTAGTTCTACAGCGGTCACTTCATCATCTTCCCAAATGATGTCCCAAACAACTCCGGTGTCCCTTAAAGGAGTTGCCTCTGGCTATCAAAGCTCTGTGGAGCATAATGCAGGTCACATGAAAAGTGTTTTTATGCCTGCTTCATCACCTTATGATCTTCCATCAATCATCACAGGAGATGGAGGAGATCAAACACAGAGTCATCCTCTTGTTGGTGGCTCCATGGATAATGTTGGGGACAAGCAGATTGTTGACGTGCCCCAGAAGTTACCAGAACGTGATTTTGCCAACACGGCTTACATTCCAGTTTATGTTATGCTGCCACTAGGTGTCATTAATATGAAGTGTGAACTGGTTGATCCAGATGGCCTATTAAAGCAGCTAAGGGTATTGAAATCAGTTAATGTTGATGGTGTTATGGTTGATTGCTGGTGGGGGATAGTAGAGGGACATGCTCCACTGGAGTATAACTGGAATGGATATAAGAGACTCTTTCAGATGGTGCGCGACCTAAAGCTGAAGTTGCAGGTTGTGATGTCATTTCATGAATGTGGAGGCAATGTGGGTGATGATGTATGTATTACACTACCCCATTGGGTGGCTGAAATTGGTAGAAGTAACCCTGACATATTTTTCACTGATAGAGCAGGAAGACGTAACCCTGAATGCCTATCATGGGGAATAGACAAGGAACGAGTTTTAAGAGGCCGGACTGCTGTTGAGGTATACTTTGACTGCATGAGAAGCTTCCGTGTAGAGTTTGACGAGTTCTTTCAAGATGGCATTATCTCCATGATTCAAGTTGGACTAGGTCCATGTGGCGAACTAAGATTCCCATCTTGTACTGTAAAGCATGGTTGGCGATATCCAGGCATTGGTGAATTTCAGTGTTATGATCAGTATTTGCTGAAAAGTCTGAGAAAGGCAGCAGAAGCAAGGGGACACTCCTTCTGGGGTAGAGGTCCAGATAATGCAGGTTCTTATAATTCGCGGCCACATGAATCCGGTTTCTTTTGCGATGGAGGAGATTATGATGGCTACTATGGCAGGTTCTTCCTTAATTGGTACTCCCGAGTTTTAGTTGATCATGGTGATCGAGTGCTTTCTCTAGCAAAGCTAGCGTTTGACAGCACCTGCATTGCTGCAAAGCTATCAGGTATTCACTGGTGGTACAAGACACCTAGTCATGCTGCTGAGCTGACTGCTGGCTTCTATAATCCATGCAACCGAGATGGTTATGCTGCAATTATGATGATGCTAAAGAAGCATGGTGCTTCTTTAAACCTCGTATGCACTCAATTGAATACGTTAGACCAGAATATTGACTTCCAAGAGGCAATGGGAGATCCTGAGGGTTTATTTTGGCAAGTGCTGAATGCTGCATGGGATGTTTGCGTACCAGTTTCTAGTGAGAATGCTCTTTTATGTCATAATCGTGTCGGATACAACAAGATATTGGATAATTCCAAGCCCTTGACTGATCCAGATGGAAGGCATTTGTCATCTTTTACCTACCTTAGGCTCAGTCCGCTTCTAATGGAAAGACATAACTTCATGGAATTTGACCGATTTGTTAAGAGAATGCATGGGGAAGCTGTTCTTGATCTCCATGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

695

Amino Acids

77.71

Weight (kDa)

5.59

Isoelectric Point (pI)

40.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BES1_N PF05687 80 - 217 5.2e-40 BES1/BZR1 plant transcription factor, N-terminal
Glyco_hydro_14 PF01373 261 - 676 2.4e-119 Glycosyl hydrolase family 14
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012153)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G46680 AT2G46680 AT3G61890
fragaria_vesca FvH4_7g17320
malus_domestica MD00G1036300.v1.1 MD07G1156200.v1.1
prunus_persica Prupe.2G194400_v2.0.a1
pyrus_communis pycom01g11010 pycom07g15300
rosa_chinensis RchiOBHm_Chr1g0360751
rosa_laevigata RLG00000027788
rosa_multiflora Rmu_ssc0000022.1_g000013
rosa_roxburghii Rroxscaffold_4G00295850
rosa_rugosa Rorug01G0281300
rosa_samantha Rh1AG293400 Rh1BG257800 Rh1CG275800 Rh1DG287900
rosa_wichuraiana Rw1G025950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 348, 1455
AarI CACCTGC 1 cut(s) 1613
Acc36I ACCTGC 5 cut(s) 572, 988, 1436, 1509, 1613
AccB7I CCANNNNNTGG 2 cut(s) 1069, 1346
AccBSI CCGCTC 1 cut(s) 289
AccI GTMKAC 2 cut(s) 250, 1197
AccII CGCG 2 cut(s) 978, 1462
AccIII TCCGGA 1 cut(s) 421
AciI CCGC 5 cut(s) 289, 386, 485, 1462, 2000
AclWI GGATC 3 cut(s) 824, 1811, 1946
AcoI YGGCCR 1 cut(s) 1463
AcsI RAATTY 2 cut(s) 1352, 2030
AcuI CTGAAG 1 cut(s) 1010
AdeI CACNNNGTG 1 cut(s) 800
AfaI GTAC 4 cut(s) 1315, 1538, 1643, 1869
AfiI CCNNNNNNNGG 8 cut(s) 228, 229, 230, 683, 1069, 1147, 1346, 1989
AgeI ACCGGT 1 cut(s) 183
AgsI TTSAA 6 cut(s) 191, 444, 865, 1247, 1271, 1774
AhdI GACNNNNNGTC 1 cut(s) 1653
AjiI CACGTC 1 cut(s) 727
AjnI CCWGG 2 cut(s) 223, 1339
AloI GAACNNNNNNTCC 4 cut(s) 421, 453, 1287, 1319
Alw26I GTCTC 1 cut(s) 952
AlwI GGATC 3 cut(s) 824, 1811, 1946
AlwNI CAGNNNCTG 1 cut(s) 1605
Ama87I CYCGRG 1 cut(s) 1542
Aor13HI TCCGGA 1 cut(s) 421
AoxI GGCC 5 cut(s) 454, 461, 838, 1177, 1463
ApaI GGGCCC 1 cut(s) 458
ApeKI GCWGC 8 cut(s) 292, 790, 850, 1397, 1613, 1661, 1712, 1850
ApoI RAATTY 2 cut(s) 1352, 2030
ArsI GACNNNNNNTTYG 2 cut(s) 655, 687
AseI ATTAAT 1 cut(s) 807
AsiGI ACCGGT 1 cut(s) 183
Asp700I GAANNNNTTC 1 cut(s) 2067
AspLEI GCGC 2 cut(s) 297, 978
AspS9I GGNCC 5 cut(s) 219, 454, 455, 1283, 1433
AsuHPI GGTGA 5 cut(s) 101, 609, 1049, 1361, 1574
AsuNHI GCTAGC 1 cut(s) 1588
AvaI CYCGRG 1 cut(s) 1542
AvaII GGWCC 3 cut(s) 219, 1283, 1433
AxyI CCTNAGG 2 cut(s) 1821, 1988
BaeGI GKGCMC 2 cut(s) 458, 732
BanII GRGCYC 2 cut(s) 131, 458
BbsI GAAGAC 1 cut(s) 1129
BbvI GCAGC 8 cut(s) 304, 777, 862, 1409, 1600, 1648, 1699, 1837
BceAI ACGGC 1 cut(s) 780
BcgI CGANNNNNNTGC 1 cut(s) 29
BciT130I CCWGG 2 cut(s) 225, 1341
BciVI GTATCC 1 cut(s) 1907
BclI TGATCA 2 cut(s) 1366, 1555
BcoDI GTCTC 1 cut(s) 952
BfaI CTAG 8 cut(s) 240, 396, 797, 1280, 1580, 1589, 1653, 1878
BfmI CTRYAG 1 cut(s) 480
BfuAI ACCTGC 5 cut(s) 572, 988, 1436, 1509, 1613
BfuI GTATCC 1 cut(s) 1907
BglI GCCNNNNNGGC 1 cut(s) 764
BglII AGATCT 1 cut(s) 315
BlpI GCTNAGC 1 cut(s) 1665
Bme1390I CCNGG 2 cut(s) 225, 1341
Bme18I GGWCC 3 cut(s) 219, 1283, 1433
BmeRI GACNNNNNGTC 1 cut(s) 1653
BmeT110I CYCGRG 1 cut(s) 1542
BmgBI CACGTC 1 cut(s) 727
BmgT120I GGNCC 5 cut(s) 219, 454, 455, 1283, 1433
BmiI GGNNCC 5 cut(s) 220, 221, 430, 456, 691
BmrFI CCNGG 2 cut(s) 225, 1341
BmsI GCATC 2 cut(s) 112, 1716
BmtI GCTAGC 1 cut(s) 1592
BpiI GAAGAC 1 cut(s) 1129
BplI GAGNNNNNCTC 2 cut(s) 661, 693
BpmI CTGGAG 1 cut(s) 953
Bpu10I CCTNAGC 1 cut(s) 854
Bpu1102I GCTNAGC 1 cut(s) 1665
BsaBI GATNNNNATC 2 cut(s) 137, 1306
BsaJI CCNNGG 3 cut(s) 223, 458, 693
BsaWI WCCGGW 4 cut(s) 183, 421, 526, 1475
BsaXI ACNNNNNCTCC 4 cut(s) 144, 174, 1017, 1047
Bsc4I CCNNNNNNNGG 8 cut(s) 228, 229, 230, 683, 1069, 1147, 1346, 1989
Bse118I RCCGGY 1 cut(s) 183
Bse1I ACTGG 6 cut(s) 776, 828, 936, 947, 1640, 1871
Bse21I CCTNAGG 2 cut(s) 1821, 1988
Bse3DI GCAATG 3 cut(s) 1036, 1608, 1815
Bse8I GATNNNNATC 2 cut(s) 137, 1306
BseAI TCCGGA 1 cut(s) 421
BseBI CCWGG 2 cut(s) 225, 1341
BseDI CCNNGG 3 cut(s) 223, 458, 693
BseGI GGATG 5 cut(s) 73, 162, 430, 673, 1864
BseJI GATNNNNATC 2 cut(s) 137, 1306
BseLI CCNNNNNNNGG 8 cut(s) 228, 229, 230, 683, 1069, 1147, 1346, 1989
BseMI GCAATG 3 cut(s) 1036, 1608, 1815
BseMII CTCAG 6 cut(s) 367, 464, 1379, 1656, 1812, 2008
BseNI ACTGG 6 cut(s) 776, 828, 936, 947, 1640, 1871
BseRI GAGGAG 3 cut(s) 249, 669, 1509
BseSI GKGCMC 2 cut(s) 458, 732
BseXI GCAGC 8 cut(s) 304, 777, 862, 1409, 1600, 1648, 1699, 1837
BseYI CCCAGC 1 cut(s) 408
Bsh1236I CGCG 2 cut(s) 978, 1462
BshFI GGCC 5 cut(s) 456, 463, 840, 1179, 1465
BshTI ACCGGT 1 cut(s) 183
BsiHKCI CYCGRG 1 cut(s) 1542
BsiSI CCGG 5 cut(s) 184, 422, 527, 1180, 1476
BslFI GGGAC 7 cut(s) 43, 232, 499, 517, 722, 933, 1425
BslI CCNNNNNNNGG 8 cut(s) 228, 229, 230, 683, 1069, 1147, 1346, 1989
BsmAI GTCTC 1 cut(s) 952
BsmFI GGGAC 7 cut(s) 43, 232, 499, 517, 722, 933, 1425
BsmI GAATGC 4 cut(s) 1142, 1852, 1891, 2058
BsnI GGCC 5 cut(s) 456, 463, 840, 1179, 1465
BsoBI CYCGRG 1 cut(s) 1542
Bsp120I GGGCCC 1 cut(s) 454
Bsp1286I GDGCHC 3 cut(s) 131, 458, 732
Bsp13I TCCGGA 1 cut(s) 421
Bsp1720I GCTNAGC 1 cut(s) 1665
Bsp19I CCATGG 1 cut(s) 693
BspACI CCGC 5 cut(s) 289, 386, 485, 1462, 2000
BspANI GGCC 5 cut(s) 456, 463, 840, 1179, 1465
BspCNI CTCAG 6 cut(s) 366, 463, 1380, 1657, 1813, 2007
BspEI TCCGGA 1 cut(s) 421
BspFNI CGCG 2 cut(s) 978, 1462
BspHI TCATGA 1 cut(s) 1015
BspLI GGNNCC 5 cut(s) 220, 221, 430, 456, 691
BspMI ACCTGC 5 cut(s) 572, 988, 1436, 1509, 1613
BspOI GCTAGC 1 cut(s) 1592
BspPI GGATC 3 cut(s) 824, 1811, 1946
BsrBI CCGCTC 1 cut(s) 289
BsrDI GCAATG 3 cut(s) 1036, 1608, 1815
BsrFI RCCGGY 1 cut(s) 183
BsrI ACTGG 6 cut(s) 776, 828, 936, 947, 1640, 1871
BssAI RCCGGY 1 cut(s) 183
BssECI CCNNGG 3 cut(s) 223, 458, 693
BssNAI GTATAC 1 cut(s) 1198
BssT1I CCWWGG 2 cut(s) 458, 693
Bst1107I GTATAC 1 cut(s) 1198
Bst2UI CCWGG 2 cut(s) 225, 1341
Bst4CI ACNGT 2 cut(s) 255, 1318
Bst6I CTCTTC 2 cut(s) 72, 255
BstC8I GCNNGC 6 cut(s) 127, 406, 465, 609, 1590, 1678
BstDSI CCRYGG 1 cut(s) 693
BstENI CCTNNNNNAGG 1 cut(s) 1987
BstF5I GGATG 5 cut(s) 73, 162, 430, 673, 1864
BstFNI CGCG 2 cut(s) 978, 1462
BstHHI GCGC 2 cut(s) 297, 978
BstMAI GTCTC 1 cut(s) 952
BstNI CCWGG 2 cut(s) 225, 1341
BstNSI RCATGY 2 cut(s) 119, 926
BstSCI CCNGG 2 cut(s) 223, 1339
BstSFI CTRYAG 1 cut(s) 480
BstSLI GKGCMC 2 cut(s) 458, 732
BstUI CGCG 2 cut(s) 978, 1462
BstV1I GCAGC 8 cut(s) 304, 777, 862, 1409, 1600, 1648, 1699, 1837
BstV2I GAAGAC 1 cut(s) 1129
BstX2I RGATCY 2 cut(s) 315, 1816
BstYI RGATCY 2 cut(s) 315, 1816
BstZ17I GTATAC 1 cut(s) 1198
Bsu36I CCTNAGG 2 cut(s) 1821, 1988
BsuI GTATCC 1 cut(s) 1907
BsuRI GGCC 5 cut(s) 456, 463, 840, 1179, 1465
BtgI CCRYGG 1 cut(s) 693
BtgZI GCGATG 1 cut(s) 1503
BtrI CACGTC 1 cut(s) 727
BtsCI GGATG 5 cut(s) 73, 162, 430, 673, 1864
BtsI GCAGTG 1 cut(s) 306
BtsIMutI CAGTG 5 cut(s) 306, 929, 1107, 1364, 1633
BveI ACCTGC 5 cut(s) 572, 988, 1436, 1509, 1613
Cac8I GCNNGC 6 cut(s) 127, 406, 465, 609, 1590, 1678
CaiI CAGNNNCTG 1 cut(s) 1605
CciI TCATGA 1 cut(s) 1015
CfoI GCGC 2 cut(s) 297, 978
Cfr10I RCCGGY 1 cut(s) 183
Cfr13I GGNCC 5 cut(s) 219, 454, 455, 1283, 1433
Csp6I GTAC 4 cut(s) 1314, 1537, 1642, 1868
CspAI ACCGGT 1 cut(s) 183
CviQI GTAC 4 cut(s) 1314, 1537, 1642, 1868
DraI TTTAAA 1 cut(s) 1752
DraIII CACNNNGTG 1 cut(s) 800
DriI GACNNNNNGTC 1 cut(s) 1653
EaeI YGGCCR 1 cut(s) 1463
Eam1104I CTCTTC 2 cut(s) 72, 255
Eam1105I GACNNNNNGTC 1 cut(s) 1653
EarI CTCTTC 2 cut(s) 72, 255
Eco130I CCWWGG 2 cut(s) 458, 693
Eco147I AGGCCT 1 cut(s) 463
Eco24I GRGCYC 2 cut(s) 131, 458
Eco32I GATATC 2 cut(s) 370, 1337
Eco47I GGWCC 3 cut(s) 219, 1283, 1433
Eco57I CTGAAG 1 cut(s) 1010
Eco81I CCTNAGG 2 cut(s) 1821, 1988
Eco88I CYCGRG 1 cut(s) 1542
EcoNI CCTNNNNNAGG 1 cut(s) 1987
EcoO109I RGGNCCY 2 cut(s) 219, 454
EcoRII CCWGG 2 cut(s) 223, 1339
EcoRV GATATC 2 cut(s) 370, 1337
EcoT14I CCWWGG 2 cut(s) 458, 693
EcoT22I ATGCAT 1 cut(s) 2058
EcoT38I GRGCYC 2 cut(s) 131, 458
ErhI CCWWGG 2 cut(s) 458, 693
FalI AAGNNNNNCTT 4 cut(s) 947, 979, 2055, 2087
FaqI GGGAC 7 cut(s) 43, 232, 499, 517, 722, 933, 1425
FbaI TGATCA 2 cut(s) 1366, 1555
FblI GTMKAC 2 cut(s) 250, 1197
FokI GGATG 5 cut(s) 80, 169, 437, 660, 1871
FriOI GRGCYC 2 cut(s) 131, 458
FspBI CTAG 8 cut(s) 240, 396, 797, 1280, 1580, 1589, 1653, 1878
GlaI GCGC 2 cut(s) 296, 977
GsaI CCCAGC 1 cut(s) 412
GsuI CTGGAG 1 cut(s) 953
HaeIII GGCC 5 cut(s) 456, 463, 840, 1179, 1465
HapII CCGG 5 cut(s) 184, 422, 527, 1180, 1476
HhaI GCGC 2 cut(s) 297, 978
Hin6I GCGC 2 cut(s) 295, 976
HinP1I GCGC 2 cut(s) 295, 976
HincII GTYRAC 1 cut(s) 724
HindII GTYRAC 1 cut(s) 724
HindIII AAGCTT 1 cut(s) 1216
HinfI GANTC 6 cut(s) 357, 670, 960, 1267, 1302, 1472
HpaII CCGG 5 cut(s) 184, 422, 527, 1180, 1476
HphI GGTGA 5 cut(s) 101, 609, 1049, 1361, 1574
Hpy166II GTNNAC 4 cut(s) 251, 724, 821, 1198
Hpy188I TCNGA 4 cut(s) 356, 969, 1389, 1913
Hpy188III TCNNGA 9 cut(s) 422, 833, 1016, 1247, 1436, 1542, 1820, 1955, 2072
Hpy8I GTNNAC 4 cut(s) 251, 724, 821, 1198
HpyAV CCTTC 3 cut(s) 450, 1429, 1956
HpyCH4III ACNGT 2 cut(s) 255, 1318
HpyCH4IV ACGT 4 cut(s) 726, 748, 1126, 1778
HpySE526I ACGT 4 cut(s) 726, 748, 1126, 1778
HspAI GCGC 2 cut(s) 295, 976
KflI GGGWCCC 1 cut(s) 219
Kpn2I TCCGGA 1 cut(s) 421
Ksp22I TGATCA 2 cut(s) 1366, 1555
LmnI GCTCC 4 cut(s) 236, 571, 695, 931
Lsp1109I GCAGC 8 cut(s) 304, 777, 862, 1409, 1600, 1648, 1699, 1837
LweI GCATC 2 cut(s) 112, 1716
MaeI CTAG 8 cut(s) 240, 396, 797, 1280, 1580, 1589, 1653, 1878
MaeII ACGT 4 cut(s) 726, 748, 1126, 1778
MaeIII GTNAC 6 cut(s) 160, 487, 584, 738, 1088, 1127
MbiI CCGCTC 1 cut(s) 289
MfeI CAATTG 1 cut(s) 1769
MflI RGATCY 2 cut(s) 315, 1816
MhlI GDGCHC 3 cut(s) 131, 458, 732
MlyI GAGTC 3 cut(s) 366, 679, 954
MmeI TCCRAC 2 cut(s) 1255, 1891
Mph1103I ATGCAT 1 cut(s) 2058
MroI TCCGGA 1 cut(s) 421
MroXI GAANNNNTTC 1 cut(s) 2067
MseI TTAA 9 cut(s) 23, 537, 807, 845, 873, 1172, 1530, 1751, 2046
MslI CAYNNNNRTG 5 cut(s) 68, 120, 809, 1020, 1905
MspA1I CMGCKG 1 cut(s) 485
MspI CCGG 5 cut(s) 184, 422, 527, 1180, 1476
MspR9I CCNGG 2 cut(s) 225, 1341
MunI CAATTG 1 cut(s) 1769
Mva1269I GAATGC 4 cut(s) 1142, 1852, 1891, 2058
MvaI CCWGG 2 cut(s) 225, 1341
MvnI CGCG 2 cut(s) 978, 1462
NcoI CCATGG 1 cut(s) 693
NheI GCTAGC 1 cut(s) 1588
NlaIV GGNNCC 5 cut(s) 220, 221, 430, 456, 691
NmuCI GTSAC 2 cut(s) 487, 584
NsiI ATGCAT 1 cut(s) 2058
NspI RCATGY 2 cut(s) 119, 926
PagI TCATGA 1 cut(s) 1015
PaqCI CACCTGC 1 cut(s) 1613
PceI AGGCCT 1 cut(s) 463
PctI GAATGC 4 cut(s) 1142, 1852, 1891, 2058
PdmI GAANNNNTTC 1 cut(s) 2067
PfeI GAWTC 3 cut(s) 1267, 1302, 1472
PflFI GACNNNGTC 1 cut(s) 1281
PflMI CCANNNNNTGG 2 cut(s) 1069, 1346
PinAI ACCGGT 1 cut(s) 183
PleI GAGTC 3 cut(s) 365, 678, 954
PpsI GAGTC 3 cut(s) 365, 678, 954
PpuMI RGGWCCY 1 cut(s) 219
PshBI ATTAAT 1 cut(s) 807
PsiI TTATAA 2 cut(s) 348, 1455
Psp5II RGGWCCY 1 cut(s) 219
Psp6I CCWGG 2 cut(s) 223, 1339
PspFI CCCAGC 1 cut(s) 408
PspGI CCWGG 2 cut(s) 223, 1339
PspN4I GGNNCC 5 cut(s) 220, 221, 430, 456, 691
PspOMI GGGCCC 1 cut(s) 454
PspPI GGNCC 5 cut(s) 219, 454, 455, 1283, 1433
PspPPI RGGWCCY 1 cut(s) 219
PstNI CAGNNNCTG 1 cut(s) 1605
PsuI RGATCY 2 cut(s) 315, 1816
PsyI GACNNNGTC 1 cut(s) 1281
RsaI GTAC 4 cut(s) 1315, 1538, 1643, 1869
RsaNI GTAC 4 cut(s) 1314, 1537, 1642, 1868
RseI CAYNNNNRTG 5 cut(s) 68, 120, 809, 1020, 1905
SaqAI TTAA 9 cut(s) 23, 537, 807, 845, 873, 1172, 1530, 1751, 2046
Sau96I GGNCC 5 cut(s) 219, 454, 455, 1283, 1433
SchI GAGTC 3 cut(s) 366, 679, 954
ScrFI CCNGG 2 cut(s) 225, 1341
SduI GDGCHC 3 cut(s) 131, 458, 732
SfaNI GCATC 2 cut(s) 112, 1716
SfcI CTRYAG 1 cut(s) 480
SinI GGWCC 3 cut(s) 219, 1283, 1433
SmiMI CAYNNNNRTG 5 cut(s) 68, 120, 809, 1020, 1905
SseBI AGGCCT 1 cut(s) 463
SsiI CCGC 5 cut(s) 289, 386, 485, 1462, 2000
SspI AATATT 1 cut(s) 1792
SspMI CTAG 8 cut(s) 240, 396, 797, 1280, 1580, 1589, 1653, 1878
StuI AGGCCT 1 cut(s) 463
StyD4I CCNGG 2 cut(s) 223, 1339
StyI CCWWGG 2 cut(s) 458, 693
TaaI ACNGT 2 cut(s) 255, 1318
TaiI ACGT 4 cut(s) 729, 751, 1129, 1781
TaqI TCGA 1 cut(s) 1567
TaqII GACCGA 1 cut(s) 2052
TatI WGTACW 1 cut(s) 1313
TauI GCSGC 3 cut(s) 292, 389, 1465
TfiI GAWTC 3 cut(s) 1267, 1302, 1472
Tru1I TTAA 9 cut(s) 23, 537, 807, 845, 873, 1172, 1530, 1751, 2046
Tru9I TTAA 9 cut(s) 23, 537, 807, 845, 873, 1172, 1530, 1751, 2046
TscAI CASTG 5 cut(s) 313, 936, 1114, 1364, 1640
TseFI GTSAC 2 cut(s) 487, 584
TseI GCWGC 8 cut(s) 292, 790, 850, 1397, 1613, 1661, 1712, 1850
Tsp45I GTSAC 2 cut(s) 487, 584
TspDTI ATGAA 8 cut(s) 483, 603, 605, 827, 1004, 1032, 1485, 2014
TspGWI ACGGA 2 cut(s) 346, 1211
TspRI CASTG 5 cut(s) 313, 936, 1114, 1364, 1640
Tth111I GACNNNGTC 1 cut(s) 1281
Van91I CCANNNNNTGG 2 cut(s) 1069, 1346
VpaK11BI GGWCC 3 cut(s) 219, 1283, 1433
VspI ATTAAT 1 cut(s) 807
XagI CCTNNNNNAGG 1 cut(s) 1987
XapI RAATTY 2 cut(s) 1352, 2030
XceI RCATGY 2 cut(s) 119, 926
XmiI GTMKAC 2 cut(s) 250, 1197
XmnI GAANNNNTTC 1 cut(s) 2067
XspI CTAG 8 cut(s) 240, 396, 797, 1280, 1580, 1589, 1653, 1878
Zsp2I ATGCAT 1 cut(s) 2058
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.