Rorug01G0330900

Belongs to the Casparian strip membrane proteins (CASP) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0017713
Physical Location & Seq
Reverse (-)
44949058 .. 44951801
2744 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0330900.1

Sequence Viewer

Length: 1377 bp
ATGCTCACCAAAATCATCAAACGCGGCCACCGCAAACCCTCCAAGCCCGACGACCCTTCCGACTCCAAACCCGACCCGCAACCCCCCGCCGCTCCGAACCCAATGGAACCCCTCCCCCTCTTCCAAAACGTCGCCTTTTCCGACCGCGCATCCCTCTTCCTCCGCAAGCTCCGCCTCTGCTCCTTCCTCTGCGACTTCTCCAACTCCGGCAAGTGGGCCCGCGAAATCGAGCTCAAGCGCCAAACCCTACTCGAGCTCGTCGACTTCATCGACTCCTCCGGCTGCCCCAAACTCCTCACCCCTCAATTGCAGGAAGACTTCATCCGCATGGTCTCCGTCAACCTCTTCCGCTGCCTCCCTCCGGCCTCCGACTCCGCCGACCTCGGCGACGACGACGAGCCCTACACGGAGCCCTCGTGGCCGCACCTCCAAATCGTCTACGAGCTTCTGCTGAGGTACATTGCTTCCTCCGAAACCGACGCCAAATTGGCCAAGCGCTTCATTGATCATATCTTTGTGCTGAGGTTAATGGAGCTCTTCGATTCCGAAGACCCGAGGGAACGAGACTATCTGAAAACGCTTCTGCATAGGATATATGGCAAGTTCATGGTGCACAGACCGTTTATAAGGAAGGCCATGAACAATGTGTTCTATAGGTTTATTTTCGAGACGCAGAGGCATTGTGGGATTGGGGAGTTGTTGGAGATTTTGGGGAGTATTATAAATGGGTTTGCTTTGCCAATGAAAGAGGAGCATAAGTTGTTCCTGGTCAGGGCACTTATTCCTCTGCATAAACCCAAGGGGTTTTGGGCATATCATCACCAGTTGGCCTATTGTATTATACAGTTTGTTGATAAGGATTATCATCTTGCGGAATTGGTGATCAGAGGGTTGTTGAAGTATTGGCCGGTTACTAATTGTCAGAAGGAGGTTCTGTTTCTTGCAGAGTTGGAAGAGGTTTTGGAGGCTACTCCGGCTTCGGAGTTCCAGAGGTGTATGCTGCCACTCTTTAGACAGATTGGACGATGCCTGACTAGCGCGCATTTCCAGGTTGCCCAACAAGCTCTATACTTGTGGAACAGCGAGCACGTTGTAAATTTAATAGCTCAGAACCGGAATGTGATATTACCATTACTCTTTGACGCGTTAGAGAAGAACACGCAAGGTCACTGGAACCAGGGTATACACGATCTGACAGCCAATGTGCGAAAGATATTCCAGGAAATGGATTCCGAATTGTTTGAAGAGTGCCAGGAGCAATACGTAGAGAAAGTAACCAGGGCTAGAGTATTGGAAGAGCAACGAGAATTGACATGGAAGAAAATAGAGGCAGTCGCCGCAACTGCAGGGGCAGAGGATATGGTTTTGGTTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0048037 GO:0051536 GO:0051540 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF588

Protein Analysis

458

Amino Acids

53.25

Weight (kDa)

6.13

Isoelectric Point (pI)

37.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B56 PF01603 38 - 445 3.4e-174 Protein phosphatase 2A regulatory B subunit (B56 family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017713)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g22230
rosa_chinensis RchiOBHm_Chr1g0366621
rosa_laevigata RLG00000027332
rosa_multiflora Rmu_sc0003180.1_g000008
rosa_roxburghii Rroxscaffold_4G00289810
rosa_rugosa Rorug01G0330900 Rorug01G0331000
rosa_samantha Rh1AG339300 Rh1BG301000 Rh1CG315800 Rh1DG332600
rosa_wichuraiana Rw1G030050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 626, 722
AccB7I CCANNNNNTGG 1 cut(s) 1225
AccBSI CCGCTC 1 cut(s) 92
AccI GTMKAC 3 cut(s) 261, 438, 1183
AccII CGCG 5 cut(s) 24, 147, 222, 1040, 1145
AcoI YGGCCR 4 cut(s) 25, 419, 489, 905
AcsI RAATTY 1 cut(s) 1096
AcyI GRCGYC 1 cut(s) 480
AfaI GTAC 1 cut(s) 458
AfeI AGCGCT 1 cut(s) 497
AfiI CCNNNNNNNGG 4 cut(s) 213, 361, 772, 1225
AflIII ACRYGT 1 cut(s) 1143
AgsI TTSAA 2 cut(s) 898, 1244
AjnI CCWGG 6 cut(s) 765, 1047, 1176, 1218, 1251, 1277
AluBI AGCT 7 cut(s) 169, 232, 256, 445, 535, 1064, 1106
AluI AGCT 7 cut(s) 169, 232, 256, 445, 535, 1064, 1106
Alw21I GWGCWC 5 cut(s) 234, 258, 537, 615, 1089
Alw26I GTCTC 3 cut(s) 337, 558, 662
Alw44I GTGCAC 1 cut(s) 611
Ama87I CYCGRG 2 cut(s) 251, 553
Aor51HI AGCGCT 1 cut(s) 497
AoxI GGCC 8 cut(s) 25, 216, 363, 419, 489, 633, 828, 905
ApaI GGGCCC 1 cut(s) 220
ApaLI GTGCAC 1 cut(s) 611
ApeKI GCWGC 3 cut(s) 282, 351, 1000
ApoI RAATTY 1 cut(s) 1096
AspLEI GCGC 5 cut(s) 149, 240, 498, 1040, 1042
AspS9I GGNCC 2 cut(s) 216, 217
AsuHPI GGTGA 3 cut(s) 289, 812, 892
AvaI CYCGRG 2 cut(s) 251, 553
BaeGI GKGCMC 3 cut(s) 220, 615, 778
BalI TGGCCA 1 cut(s) 491
BanII GRGCYC 6 cut(s) 220, 234, 258, 402, 414, 537
BauI CACGAG 1 cut(s) 415
BbsI GAAGAC 2 cut(s) 321, 555
Bbv12I GWGCWC 5 cut(s) 234, 258, 537, 615, 1089
BbvCI CCTCAGC 2 cut(s) 452, 521
BbvI GCAGC 3 cut(s) 269, 338, 987
BciT130I CCWGG 6 cut(s) 767, 1049, 1178, 1220, 1253, 1279
BclI TGATCA 2 cut(s) 505, 882
BcoDI GTCTC 3 cut(s) 337, 558, 662
BfaI CTAG 2 cut(s) 1035, 1284
BfmI CTRYAG 2 cut(s) 652, 1344
BfoI RGCGCY 2 cut(s) 241, 499
BglI GCCNNNNNGGC 2 cut(s) 418, 488
BisI GCNGC 7 cut(s) 25, 90, 283, 352, 422, 1001, 1338
BlsI GCNGC 7 cut(s) 26, 91, 284, 353, 423, 1002, 1339
Bme1390I CCNGG 6 cut(s) 767, 1049, 1178, 1220, 1253, 1279
BmeT110I CYCGRG 2 cut(s) 251, 553
BmgT120I GGNCC 2 cut(s) 216, 217
BmiI GGNNCC 4 cut(s) 108, 218, 411, 1175
BmrFI CCNGG 6 cut(s) 767, 1049, 1178, 1220, 1253, 1279
BmsI GCATC 2 cut(s) 158, 1016
BpiI GAAGAC 2 cut(s) 321, 555
Bpu10I CCTNAGC 2 cut(s) 452, 521
BpuEI CTTGAG 1 cut(s) 218
BsaAI YACGTR 1 cut(s) 1264
BsaBI GATNNNNATC 1 cut(s) 864
BsaHI GRCGYC 1 cut(s) 480
BsaI GGTCTC 1 cut(s) 337
BsaJI CCNNGG 5 cut(s) 382, 554, 798, 1177, 1278
BsaWI WCCGGW 1 cut(s) 1113
BsaXI ACNNNNNCTCC 6 cut(s) 401, 431, 743, 773, 920, 950
Bsc4I CCNNNNNNNGG 4 cut(s) 213, 361, 772, 1225
Bse118I RCCGGY 1 cut(s) 907
Bse1I ACTGG 2 cut(s) 823, 1175
Bse3DI GCAATG 1 cut(s) 459
Bse8I GATNNNNATC 1 cut(s) 864
BseBI CCWGG 6 cut(s) 767, 1049, 1178, 1220, 1253, 1279
BseDI CCNNGG 5 cut(s) 382, 554, 798, 1177, 1278
BseGI GGATG 2 cut(s) 149, 321
BseJI GATNNNNATC 1 cut(s) 864
BseLI CCNNNNNNNGG 4 cut(s) 213, 361, 772, 1225
BseMI GCAATG 1 cut(s) 459
BseMII CTCAG 3 cut(s) 443, 512, 1121
BseNI ACTGG 2 cut(s) 823, 1175
BsePI GCGCGC 1 cut(s) 1038
BseRI GAGGAG 3 cut(s) 265, 284, 764
BseSI GKGCMC 3 cut(s) 220, 615, 778
BseXI GCAGC 3 cut(s) 269, 338, 987
Bsh1236I CGCG 5 cut(s) 24, 147, 222, 1040, 1145
Bsh1285I CGRYCG 1 cut(s) 145
BshFI GGCC 8 cut(s) 27, 218, 365, 421, 491, 635, 830, 907
BsiEI CGRYCG 1 cut(s) 145
BsiHKAI GWGCWC 5 cut(s) 234, 258, 537, 615, 1089
BsiHKCI CYCGRG 2 cut(s) 251, 553
BsiSI CCGG 6 cut(s) 207, 279, 362, 908, 974, 1114
BslI CCNNNNNNNGG 4 cut(s) 213, 361, 772, 1225
BsmAI GTCTC 3 cut(s) 337, 558, 662
BsmBI CGTCTC 1 cut(s) 662
BsnI GGCC 8 cut(s) 27, 218, 365, 421, 491, 635, 830, 907
Bso31I GGTCTC 1 cut(s) 337
BsoBI CYCGRG 2 cut(s) 251, 553
Bsp120I GGGCCC 1 cut(s) 216
Bsp1286I GDGCHC 9 cut(s) 220, 234, 258, 402, 414, 537, 615, 778, 1089
Bsp143I GATC 3 cut(s) 505, 882, 1189
BspANI GGCC 8 cut(s) 27, 218, 365, 421, 491, 635, 830, 907
BspCNI CTCAG 3 cut(s) 444, 513, 1120
BspFNI CGCG 5 cut(s) 24, 147, 222, 1040, 1145
BspLI GGNNCC 4 cut(s) 108, 218, 411, 1175
BspMAI CTGCAG 1 cut(s) 1348
BspQI GCTCTTC 2 cut(s) 542, 1290
BspTNI GGTCTC 1 cut(s) 337
BsrBI CCGCTC 1 cut(s) 92
BsrDI GCAATG 1 cut(s) 459
BsrFI RCCGGY 1 cut(s) 907
BsrI ACTGG 2 cut(s) 823, 1175
BssAI RCCGGY 1 cut(s) 907
BssECI CCNNGG 5 cut(s) 382, 554, 798, 1177, 1278
BssHII GCGCGC 1 cut(s) 1038
BssMI GATC 3 cut(s) 505, 882, 1189
BssNAI GTATAC 1 cut(s) 1184
BssNI GRCGYC 1 cut(s) 480
BssSI CACGAG 1 cut(s) 415
BssT1I CCWWGG 1 cut(s) 798
Bst1107I GTATAC 1 cut(s) 1184
Bst2BI CACGAG 1 cut(s) 415
Bst2UI CCWGG 6 cut(s) 767, 1049, 1178, 1220, 1253, 1279
Bst4CI ACNGT 2 cut(s) 621, 846
Bst6I CTCTTC 7 cut(s) 125, 161, 350, 542, 948, 1239, 1290
BstACI GRCGYC 1 cut(s) 480
BstBAI YACGTR 1 cut(s) 1264
BstC8I GCNNGC 4 cut(s) 167, 220, 1040, 1085
BstDEI CTNAG 3 cut(s) 452, 521, 1107
BstF5I GGATG 2 cut(s) 149, 321
BstFNI CGCG 5 cut(s) 24, 147, 222, 1040, 1145
BstH2I RGCGCY 2 cut(s) 241, 499
BstHHI GCGC 5 cut(s) 149, 240, 498, 1040, 1042
BstKTI GATC 3 cut(s) 508, 885, 1192
BstMAI GTCTC 3 cut(s) 337, 558, 662
BstMBI GATC 3 cut(s) 505, 882, 1189
BstMCI CGRYCG 1 cut(s) 145
BstMWI GCNNNNNNNGC 9 cut(s) 30, 171, 418, 488, 974, 1035, 1061, 1337, 1343
BstNI CCWGG 6 cut(s) 767, 1049, 1178, 1220, 1253, 1279
BstSCI CCNGG 6 cut(s) 765, 1047, 1176, 1218, 1251, 1277
BstSFI CTRYAG 2 cut(s) 652, 1344
BstSLI GKGCMC 3 cut(s) 220, 615, 778
BstSNI TACGTA 1 cut(s) 1264
BstUI CGCG 5 cut(s) 24, 147, 222, 1040, 1145
BstV1I GCAGC 3 cut(s) 269, 338, 987
BstV2I GAAGAC 2 cut(s) 321, 555
BstZ17I GTATAC 1 cut(s) 1184
BsuRI GGCC 8 cut(s) 27, 218, 365, 421, 491, 635, 830, 907
BtsCI GGATG 2 cut(s) 149, 321
BtsIMutI CAGTG 1 cut(s) 1168
Cac8I GCNNGC 4 cut(s) 167, 220, 1040, 1085
CfoI GCGC 5 cut(s) 149, 240, 498, 1040, 1042
Cfr10I RCCGGY 1 cut(s) 907
Cfr13I GGNCC 2 cut(s) 216, 217
CseI GACGC 3 cut(s) 488, 679, 1151
Csp6I GTAC 1 cut(s) 457
CviAII CATG 4 cut(s) 328, 607, 637, 1314
CviQI GTAC 1 cut(s) 457
DdeI CTNAG 3 cut(s) 452, 521, 1107
DpnI GATC 3 cut(s) 507, 884, 1191
DpnII GATC 3 cut(s) 505, 882, 1189
EaeI YGGCCR 4 cut(s) 25, 419, 489, 905
Eam1104I CTCTTC 7 cut(s) 125, 161, 350, 542, 948, 1239, 1290
EarI CTCTTC 7 cut(s) 125, 161, 350, 542, 948, 1239, 1290
EciI GGCGGA 2 cut(s) 161, 364
Ecl136II GAGCTC 3 cut(s) 232, 256, 535
Eco105I TACGTA 1 cut(s) 1264
Eco130I CCWWGG 1 cut(s) 798
Eco24I GRGCYC 6 cut(s) 220, 234, 258, 402, 414, 537
Eco31I GGTCTC 1 cut(s) 337
Eco47III AGCGCT 1 cut(s) 497
Eco53kI GAGCTC 3 cut(s) 232, 256, 535
Eco88I CYCGRG 2 cut(s) 251, 553
EcoICRI GAGCTC 3 cut(s) 232, 256, 535
EcoRII CCWGG 6 cut(s) 765, 1047, 1176, 1218, 1251, 1277
EcoT14I CCWWGG 1 cut(s) 798
EcoT38I GRGCYC 6 cut(s) 220, 234, 258, 402, 414, 537
ErhI CCWWGG 1 cut(s) 798
Esp3I CGTCTC 1 cut(s) 662
FaeI CATG 4 cut(s) 331, 610, 640, 1317
FatI CATG 4 cut(s) 327, 606, 636, 1313
FauI CCCGC 3 cut(s) 84, 94, 227
FbaI TGATCA 2 cut(s) 505, 882
FblI GTMKAC 3 cut(s) 261, 438, 1183
Fnu4HI GCNGC 7 cut(s) 25, 90, 283, 352, 422, 1001, 1338
FokI GGATG 2 cut(s) 136, 308
FriOI GRGCYC 6 cut(s) 220, 234, 258, 402, 414, 537
Fsp4HI GCNGC 7 cut(s) 25, 90, 283, 352, 422, 1001, 1338
FspBI CTAG 2 cut(s) 1035, 1284
GlaI GCGC 5 cut(s) 148, 239, 497, 1039, 1041
GluI GCNGC 7 cut(s) 25, 90, 283, 352, 422, 1001, 1338
HaeII RGCGCY 2 cut(s) 241, 499
HaeIII GGCC 8 cut(s) 27, 218, 365, 421, 491, 635, 830, 907
HapII CCGG 6 cut(s) 207, 279, 362, 908, 974, 1114
HgaI GACGC 3 cut(s) 488, 679, 1151
HhaI GCGC 5 cut(s) 149, 240, 498, 1040, 1042
Hin1I GRCGYC 1 cut(s) 480
Hin1II CATG 4 cut(s) 331, 610, 640, 1317
Hin6I GCGC 5 cut(s) 147, 238, 496, 1038, 1040
HinP1I GCGC 5 cut(s) 147, 238, 496, 1038, 1040
HincII GTYRAC 2 cut(s) 262, 340
HindII GTYRAC 2 cut(s) 262, 340
HinfI GANTC 5 cut(s) 62, 272, 371, 542, 1229
HpaII CCGG 6 cut(s) 207, 279, 362, 908, 974, 1114
HphI GGTGA 3 cut(s) 289, 812, 892
Hpy166II GTNNAC 5 cut(s) 262, 340, 439, 613, 1184
Hpy188III TCNNGA 2 cut(s) 667, 988
Hpy8I GTNNAC 5 cut(s) 262, 340, 439, 613, 1184
Hpy99I CGWCG 7 cut(s) 53, 134, 263, 392, 395, 398, 482
HpyAV CCTTC 4 cut(s) 66, 193, 625, 919
HpyCH4III ACNGT 2 cut(s) 621, 846
HpyCH4IV ACGT 3 cut(s) 129, 1089, 1263
HpyCH4V TGCA 6 cut(s) 310, 586, 613, 790, 944, 1346
HpyF10VI GCNNNNNNNGC 9 cut(s) 30, 171, 418, 488, 974, 1035, 1061, 1337, 1343
HpyF3I CTNAG 3 cut(s) 452, 521, 1107
HpySE526I ACGT 3 cut(s) 129, 1089, 1263
Hsp92I GRCGYC 1 cut(s) 480
Hsp92II CATG 4 cut(s) 331, 610, 640, 1317
HspAI GCGC 5 cut(s) 147, 238, 496, 1038, 1040
Ksp22I TGATCA 2 cut(s) 505, 882
Kzo9I GATC 3 cut(s) 505, 882, 1189
LguI GCTCTTC 2 cut(s) 542, 1290
LmnI GCTCC 7 cut(s) 97, 174, 185, 409, 532, 751, 1255
Lsp1109I GCAGC 3 cut(s) 269, 338, 987
LweI GCATC 2 cut(s) 158, 1016
MaeI CTAG 2 cut(s) 1035, 1284
MaeII ACGT 3 cut(s) 129, 1089, 1263
MaeIII GTNAC 3 cut(s) 910, 1166, 1273
MalI GATC 3 cut(s) 507, 884, 1191
MbiI CCGCTC 1 cut(s) 92
MboI GATC 3 cut(s) 505, 882, 1189
MfeI CAATTG 1 cut(s) 305
MhlI GDGCHC 9 cut(s) 220, 234, 258, 402, 414, 537, 615, 778, 1089
MlsI TGGCCA 1 cut(s) 491
MluCI AATT 8 cut(s) 305, 485, 875, 916, 1096, 1235, 1307, 1372
MluI ACGCGT 1 cut(s) 1143
MluNI TGGCCA 1 cut(s) 491
MlyI GAGTC 3 cut(s) 56, 266, 365
MmeI TCCRAC 6 cut(s) 84, 165, 225, 393, 681, 930
Mox20I TGGCCA 1 cut(s) 491
MscI TGGCCA 1 cut(s) 491
MseI TTAA 4 cut(s) 527, 1100, 1371, 1375
MslI CAYNNNNRTG 1 cut(s) 326
Msp20I TGGCCA 1 cut(s) 491
MspA1I CMGCKG 1 cut(s) 351
MspI CCGG 6 cut(s) 207, 279, 362, 908, 974, 1114
MspR9I CCNGG 6 cut(s) 767, 1049, 1178, 1220, 1253, 1279
MunI CAATTG 1 cut(s) 305
MvaI CCWGG 6 cut(s) 767, 1049, 1178, 1220, 1253, 1279
MvnI CGCG 5 cut(s) 24, 147, 222, 1040, 1145
MwoI GCNNNNNNNGC 9 cut(s) 30, 171, 418, 488, 974, 1035, 1061, 1337, 1343
NdeII GATC 3 cut(s) 505, 882, 1189
NlaIII CATG 4 cut(s) 331, 610, 640, 1317
NlaIV GGNNCC 4 cut(s) 108, 218, 411, 1175
NmeAIII GCCGAG 1 cut(s) 363
NmuCI GTSAC 1 cut(s) 1166
PacI TTAATTAA 1 cut(s) 1375
PaeR7I CTCGAG 1 cut(s) 251
PauI GCGCGC 1 cut(s) 1038
PciSI GCTCTTC 2 cut(s) 542, 1290
PcsI WCGNNNNNNNCGW 6 cut(s) 57, 138, 258, 267, 390, 413
PfeI GAWTC 2 cut(s) 542, 1229
PflMI CCANNNNNTGG 1 cut(s) 1225
PfoI TCCNGGA 1 cut(s) 1218
PkrI GCNGC 7 cut(s) 26, 91, 284, 353, 423, 1002, 1339
PleI GAGTC 3 cut(s) 56, 266, 365
PpsI GAGTC 3 cut(s) 56, 266, 365
Ppu21I YACGTR 1 cut(s) 1264
PsiI TTATAA 2 cut(s) 626, 722
Psp124BI GAGCTC 3 cut(s) 234, 258, 537
Psp6I CCWGG 6 cut(s) 765, 1047, 1176, 1218, 1251, 1277
PspGI CCWGG 6 cut(s) 765, 1047, 1176, 1218, 1251, 1277
PspN4I GGNNCC 4 cut(s) 108, 218, 411, 1175
PspOMI GGGCCC 1 cut(s) 216
PspPI GGNCC 2 cut(s) 216, 217
PspXI VCTCGAGB 1 cut(s) 251
PstI CTGCAG 1 cut(s) 1348
PteI GCGCGC 1 cut(s) 1038
RsaI GTAC 1 cut(s) 458
RsaNI GTAC 1 cut(s) 457
RseI CAYNNNNRTG 1 cut(s) 326
SacI GAGCTC 3 cut(s) 234, 258, 537
SalI GTCGAC 1 cut(s) 260
SapI GCTCTTC 2 cut(s) 542, 1290
SaqAI TTAA 4 cut(s) 527, 1100, 1371, 1375
SatI GCNGC 7 cut(s) 25, 90, 283, 352, 422, 1001, 1338
Sau3AI GATC 3 cut(s) 505, 882, 1189
Sau96I GGNCC 2 cut(s) 216, 217
SchI GAGTC 3 cut(s) 56, 266, 365
ScrFI CCNGG 6 cut(s) 767, 1049, 1178, 1220, 1253, 1279
SduI GDGCHC 9 cut(s) 220, 234, 258, 402, 414, 537, 615, 778, 1089
SfaNI GCATC 2 cut(s) 158, 1016
SfcI CTRYAG 2 cut(s) 652, 1344
Sfr274I CTCGAG 1 cut(s) 251
SlaI CTCGAG 1 cut(s) 251
SmiMI CAYNNNNRTG 1 cut(s) 326
SmlI CTYRAG 2 cut(s) 233, 251
SmoI CTYRAG 2 cut(s) 233, 251
SnaBI TACGTA 1 cut(s) 1264
Sse9I AATT 8 cut(s) 305, 485, 875, 916, 1096, 1235, 1307, 1372
SspMI CTAG 2 cut(s) 1035, 1284
SstI GAGCTC 3 cut(s) 234, 258, 537
StyD4I CCNGG 6 cut(s) 765, 1047, 1176, 1218, 1251, 1277
StyI CCWWGG 1 cut(s) 798
TaaI ACNGT 2 cut(s) 621, 846
TaiI ACGT 3 cut(s) 132, 1092, 1266
TaqI TCGA 6 cut(s) 228, 252, 261, 270, 540, 666
TasI AATT 8 cut(s) 305, 485, 875, 916, 1096, 1235, 1307, 1372
TauI GCSGC 4 cut(s) 27, 92, 424, 1340
TfiI GAWTC 2 cut(s) 542, 1229
Tru1I TTAA 4 cut(s) 527, 1100, 1371, 1375
Tru9I TTAA 4 cut(s) 527, 1100, 1371, 1375
TscAI CASTG 1 cut(s) 1175
TseFI GTSAC 1 cut(s) 1166
TseI GCWGC 3 cut(s) 282, 351, 1000
Tsp45I GTSAC 1 cut(s) 1166
TspDTI ATGAA 6 cut(s) 256, 310, 490, 595, 653, 758
TspGWI ACGGA 2 cut(s) 325, 422
TspRI CASTG 1 cut(s) 1175
Van91I CCANNNNNTGG 1 cut(s) 1225
VneI GTGCAC 1 cut(s) 611
XapI RAATTY 1 cut(s) 1096
XhoI CTCGAG 1 cut(s) 251
XmiI GTMKAC 3 cut(s) 261, 438, 1183
XspI CTAG 2 cut(s) 1035, 1284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.