Rorug01G0375000

SET and MYND domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0008715
Physical Location & Seq
Reverse (-)
48894297 .. 48896956
2660 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0375000.1

Sequence Viewer

Length: 2094 bp
ATGGCTCAAAGACTCATCCTTTTCTGGCTTTTGCTCCTCTTCCTCTCAAACCCAGCAACCTCCGACGACCTCGAGCTCATGTACAACGGCTTTAACGGCCCCAACGGCAACAACATGACCCTTAACGGCGTTGCAGAGATCGAACCCAACGGAATGTTAAAGCTCACAAACGACACTCTCCGAGTCCTCGGCCACGCCTTCTACTCCTCCCCAGTCCGATTCCGCAACTCCACAAACCGCAAAGCCTTCTCCTTCTCCACCGCTTTTGCATTCTCTATTCACCCGGAGTATCCAAAACTCGGCGGCCACGGCCTCGCCTTCGTAATCTCGCCGTCAAAAGAGCTACCGGGCTCTCTTCCGAGCCAGTACCTCGGGATTCTCAACTCCACAGTCGTCGGAAACTTCTCCAACCACATATTCGCAGTTGAGTTCGACACAGTACAAGACTTCGAGTTCAATGATACTAATGACAACCATGTAGGGATTGATATAAACAGCTTGACTTCTAATGCTTCCACTGCAGCTGGGTATTACGAGACTGGGAATTCGACAAAGAAAGTGCTCAATCTTAAAAGTGGGGATGTGATCCAAGCTTGGGTGAGTTACGATGCAGAGAAGAACCAGGTGACTGTGAAGCTTTCACCTACTTCTGTACAACCTAGAACTGCGATCTTGACGTTTGATGTAGATCTCTCTCCGATTTTTCAAGATTATATGTATGTGGGGTTTTCAGCATCAACTGGGTTGTTGGCTAGTTCTCACTATATATTGGGTTGGAGTTTCAAGATGAATGGAGAGGCAAAGTCTCTGTCTTTGGAGACTCTGTCTAAGTTTCCTAAGGCTAAGAAGACACACAAAGAGGTAATAGTTGGTGTTTCAGTTGGTGCAGCTTTGGTGTTTGTGTTTGCTTGTGGTGTTTTGGGGTTCTATATAGTTAGGAAGATCAAGAACCGGGATGTGATTGAAGCTTGGGAGCTTGATATTGGTCCTCATAGGTTTGCATACAAGGATCTGAAGAAGGCCACAAGGCATTTTAGAGATAAAGAGGTGATTGGGTTTGGTGGATTTGGGAAAGTCTACAAAGGCACTTTGCCAAATTCGGATACCCAAGTTGCGGTGAAGCGTATATCTCATGAATCCAGGCAGGGTTTGCAAGAGTTTGTGTCTGAGATTGCGAGTATTGGCCGGCTTCGCCATAGGAATTTGGTACAGTTGTTGGGGTGGTGTAGAAGAAGAGGAGATTTGCTGCTTGTGTATGACTTTATGCCTAATGGGAGTTTGGACAAGTACTTGTTTGAGAATCCGAGAGCGATTTTGAGCTGGGAGGAGAGGTTTAAGATTGTGAAGGGTGTGGCTTCAGGGCTGTTGTACTTGCATGAAGGTTGGGAGCAGACTGTGATTCATAGAGATATTAAGGCTGGGAATGTGTTGCTTGATGCTGAGATGAATGGGAGGCTTGGTGACTTTGGTCTTGCTAAGCTATATGAGCATGGTTCAAACCCAACAACAACTAGAGTGGTCGGCACGTTGGGTTACCTTGCACCTGAGCTCACCAGGACTGGGAAACCAACTCCAAGTTCTGATGTGTTTGCTCTTGGTGCTCTTTTGCTTGAGGTGGTGTGTGGGAGGAGGCCCATTGAGCAGAAAGCGCTGCCCGAGGAGCTCGTTTTGGTCGATTGGGTTTGGGATAAGTGGAAAGCTGGTGCCATTCTTGATGTTGTGGATCCAAGATTGGAGGGTGAGTTTGATGAGTTTGAGGTGGTTGTGGTGCTCAAGTTAGGCATAATGTGTTCCAACAATGTGCCAAAGGCAAGGCCAATGATGAGGCAGGTAGTGAGGTACTTGGAAGGCGAGGTGCCGCTGCCCGAGGCAGTGGCGTCTCCGGGGGCTTATGAACGGTCAAAAGATGGCGGTGATGGTAGTACTGGTGGTGAGTTTGAGGATTATGTACATTCATATTCGTATCCTCCATCTTCATATTTTGACAAGGCAAGCACTTGGTCATGTGATGATGGGGATGTTGATTTTGAAGCTGGTTCAAGCTCATCACCTCCCTCAGAACCTGCTAAAGCTGGCGGTAGCTACCCAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SET TPR_8 zf-MYND

Protein Analysis

697

Amino Acids

77.01

Weight (kDa)

6.07

Isoelectric Point (pI)

32.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 24 - 275 1.9e-77 Legume lectin domain
Lectin_L-type_dom PF18483 37 - 252 7.5e-12 Legume lectin beta-barrel domain
Pkinase PF00069 346 - 549 3.3e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 348 - 613 2.4e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1819, 2071
AccB1I GGYRCC 2 cut(s) 1703, 1855
AccI GTMKAC 1 cut(s) 1077
AciI CCGC 8 cut(s) 223, 238, 261, 303, 1115, 1859, 1911, 2076
AclWI GGATC 4 cut(s) 580, 1017, 1718, 1731
AcoI YGGCCR 3 cut(s) 190, 304, 1183
AcsI RAATTY 3 cut(s) 544, 1096, 1201
AcuI CTGAAG 2 cut(s) 1034, 1341
AcyI GRCGYC 1 cut(s) 1877
AfeI AGCGCT 1 cut(s) 1650
AfiI CCNNNNNNNGG 4 cut(s) 299, 595, 1114, 1560
AgsI TTSAA 7 cut(s) 457, 707, 784, 965, 1497, 2030, 2040
AjnI CCWGG 3 cut(s) 621, 1139, 1553
AjuI GAANNNNNNNTTGG 4 cut(s) 401, 433, 1561, 1593
Alw21I GWGCWC 6 cut(s) 78, 564, 1551, 1603, 1665, 1773
Alw26I GTCTC 4 cut(s) 530, 810, 812, 1884
AlwI GGATC 4 cut(s) 580, 1017, 1718, 1731
AlwNI CAGNNNCTG 1 cut(s) 2063
Ama87I CYCGRG 4 cut(s) 71, 371, 1655, 1865
Aor51HI AGCGCT 1 cut(s) 1650
AoxI GGCC 8 cut(s) 97, 190, 304, 310, 1020, 1183, 1631, 1814
ApeKI GCWGC 5 cut(s) 521, 887, 1246, 1651, 1861
ApoI RAATTY 3 cut(s) 544, 1096, 1201
ArsI GACNNNNNNTTYG 4 cut(s) 529, 561, 794, 826
AspLEI GCGC 1 cut(s) 1651
AspS9I GGNCC 3 cut(s) 98, 986, 1632
AsuC2I CCSGG 4 cut(s) 284, 348, 953, 1884
AvaI CYCGRG 4 cut(s) 71, 371, 1655, 1865
AvaII GGWCC 1 cut(s) 986
AxyI CCTNAGG 1 cut(s) 837
BaeI ACNNNNGTAYC 4 cut(s) 1095, 1128, 1199, 1232
BamHI GGATCC 1 cut(s) 1723
BanI GGYRCC 2 cut(s) 1703, 1855
BanII GRGCYC 4 cut(s) 78, 353, 1551, 1665
BbsI GAAGAC 1 cut(s) 854
Bbv12I GWGCWC 6 cut(s) 78, 564, 1551, 1603, 1665, 1773
BbvI GCAGC 5 cut(s) 533, 899, 1233, 1638, 1848
BccI CCATC 4 cut(s) 1901, 1910, 1978, 2006
BceAI ACGGC 6 cut(s) 103, 112, 121, 142, 316, 325
BciT130I CCWGG 3 cut(s) 623, 1141, 1555
BciVI GTATCC 3 cut(s) 300, 1096, 1974
BcnI CCSGG 4 cut(s) 284, 348, 953, 1884
BcoDI GTCTC 4 cut(s) 530, 810, 812, 1884
BfaI CTAG 3 cut(s) 660, 753, 1512
BfmI CTRYAG 1 cut(s) 519
BfoI RGCGCY 1 cut(s) 1652
BfuAI ACCTGC 2 cut(s) 1819, 2071
BfuI GTATCC 3 cut(s) 300, 1096, 1974
BglI GCCNNNNNGGC 1 cut(s) 105
BglII AGATCT 1 cut(s) 688
BisI GCNGC 7 cut(s) 304, 522, 888, 1247, 1652, 1859, 1862
BlpI GCTNAGC 1 cut(s) 1476
BlsI GCNGC 7 cut(s) 305, 523, 889, 1248, 1653, 1860, 1863
BmcAI AGTACT 2 cut(s) 1289, 1924
Bme1390I CCNGG 7 cut(s) 284, 348, 623, 953, 1141, 1555, 1884
Bme18I GGWCC 1 cut(s) 986
BmeT110I CYCGRG 4 cut(s) 71, 371, 1655, 1865
BmgT120I GGNCC 3 cut(s) 98, 986, 1632
BmiI GGNNCC 4 cut(s) 100, 1705, 1725, 1857
BmrFI CCNGG 7 cut(s) 284, 348, 623, 953, 1141, 1555, 1884
BmrI ACTGGG 4 cut(s) 206, 549, 750, 1569
BmsI GCATC 3 cut(s) 598, 743, 1426
BmuI ACTGGG 4 cut(s) 206, 549, 750, 1569
BoxI GACNNNNGTC 1 cut(s) 1467
BpiI GAAGAC 1 cut(s) 854
Bpu10I CCTNAGC 1 cut(s) 1545
Bpu1102I GCTNAGC 1 cut(s) 1476
BpuEI CTTGAG 2 cut(s) 1631, 1757
BpuMI CCSGG 4 cut(s) 284, 348, 953, 1884
BsaBI GATNNNNATC 1 cut(s) 687
BsaHI GRCGYC 1 cut(s) 1877
BsaJI CCNNGG 6 cut(s) 187, 307, 370, 1656, 1866, 1883
BsaXI ACNNNNNCTCC 8 cut(s) 809, 839, 1316, 1346, 1444, 1474, 1727, 1757
Bsc4I CCNNNNNNNGG 4 cut(s) 299, 595, 1114, 1560
Bse118I RCCGGY 1 cut(s) 1185
Bse1I ACTGG 6 cut(s) 212, 364, 544, 745, 1564, 1930
Bse21I CCTNAGG 1 cut(s) 837
Bse8I GATNNNNATC 1 cut(s) 687
BseBI CCWGG 3 cut(s) 623, 1141, 1555
BseDI CCNNGG 6 cut(s) 187, 307, 370, 1656, 1866, 1883
BseGI GGATG 4 cut(s) 15, 586, 961, 2023
BseJI GATNNNNATC 1 cut(s) 687
BseLI CCNNNNNNNGG 4 cut(s) 299, 595, 1114, 1560
BseMII CTCAG 4 cut(s) 1158, 1431, 1536, 2070
BseNI ACTGG 6 cut(s) 212, 364, 544, 745, 1564, 1930
BseRI GAGGAG 6 cut(s) 26, 196, 1251, 1340, 1642, 1673
BseXI GCAGC 5 cut(s) 533, 899, 1233, 1638, 1848
BseYI CCCAGC 4 cut(s) 52, 524, 1320, 1418
BsgI GTGCAG 1 cut(s) 906
BshFI GGCC 8 cut(s) 99, 192, 306, 312, 1022, 1185, 1633, 1816
BshNI GGYRCC 2 cut(s) 1703, 1855
BsiHKAI GWGCWC 6 cut(s) 78, 564, 1551, 1603, 1665, 1773
BsiHKCI CYCGRG 4 cut(s) 71, 371, 1655, 1865
BsiSI CCGG 5 cut(s) 284, 347, 952, 1186, 1883
BslI CCNNNNNNNGG 4 cut(s) 299, 595, 1114, 1560
BsmAI GTCTC 4 cut(s) 530, 810, 812, 1884
BsmBI CGTCTC 1 cut(s) 1884
BsmI GAATGC 1 cut(s) 269
BsnI GGCC 8 cut(s) 99, 192, 306, 312, 1022, 1185, 1633, 1816
BsoBI CYCGRG 4 cut(s) 71, 371, 1655, 1865
Bsp1286I GDGCHC 7 cut(s) 78, 353, 564, 1551, 1603, 1665, 1773
Bsp1407I TGTACA 3 cut(s) 81, 652, 1948
Bsp143I GATC 7 cut(s) 138, 585, 669, 688, 942, 1009, 1723
Bsp1720I GCTNAGC 1 cut(s) 1476
BspACI CCGC 8 cut(s) 223, 238, 261, 303, 1115, 1859, 1911, 2076
BspANI GGCC 8 cut(s) 99, 192, 306, 312, 1022, 1185, 1633, 1816
BspCNI CTCAG 4 cut(s) 1159, 1432, 1537, 2069
BspHI TCATGA 1 cut(s) 1132
BspLI GGNNCC 4 cut(s) 100, 1705, 1725, 1857
BspMAI CTGCAG 1 cut(s) 523
BspMI ACCTGC 2 cut(s) 1819, 2071
BspPI GGATC 4 cut(s) 580, 1017, 1718, 1731
BspT107I GGYRCC 2 cut(s) 1703, 1855
BsrFI RCCGGY 1 cut(s) 1185
BsrGI TGTACA 3 cut(s) 81, 652, 1948
BsrI ACTGG 6 cut(s) 212, 364, 544, 745, 1564, 1930
BssAI RCCGGY 1 cut(s) 1185
BssECI CCNNGG 6 cut(s) 187, 307, 370, 1656, 1866, 1883
BssMI GATC 7 cut(s) 138, 585, 669, 688, 942, 1009, 1723
BssNI GRCGYC 1 cut(s) 1877
Bst2UI CCWGG 3 cut(s) 623, 1141, 1555
Bst4CI ACNGT 6 cut(s) 391, 439, 631, 1212, 1396, 1899
Bst6I CTCTTC 3 cut(s) 44, 360, 1228
BstACI GRCGYC 1 cut(s) 1877
BstAPI GCANNNNNTGC 1 cut(s) 1150
BstAUI TGTACA 3 cut(s) 81, 652, 1948
BstC8I GCNNGC 3 cut(s) 1187, 1993, 2074
BstDEI CTNAG 8 cut(s) 828, 837, 843, 1167, 1440, 1476, 1545, 2056
BstDSI CCRYGG 1 cut(s) 307
BstEII GGTNACC 1 cut(s) 1532
BstF5I GGATG 4 cut(s) 15, 586, 961, 2023
BstH2I RGCGCY 1 cut(s) 1652
BstHHI GCGC 1 cut(s) 1651
BstKTI GATC 7 cut(s) 141, 588, 672, 691, 945, 1012, 1726
BstMAI GTCTC 4 cut(s) 530, 810, 812, 1884
BstMBI GATC 7 cut(s) 138, 585, 669, 688, 942, 1009, 1723
BstNI CCWGG 3 cut(s) 623, 1141, 1555
BstPAI GACNNNNGTC 1 cut(s) 1467
BstPI GGTNACC 1 cut(s) 1532
BstSCI CCNGG 7 cut(s) 282, 346, 621, 951, 1139, 1553, 1882
BstSFI CTRYAG 1 cut(s) 519
BstV1I GCAGC 5 cut(s) 533, 899, 1233, 1638, 1848
BstV2I GAAGAC 1 cut(s) 854
BstX2I RGATCY 3 cut(s) 688, 1009, 1723
BstYI RGATCY 3 cut(s) 688, 1009, 1723
Bsu36I CCTNAGG 1 cut(s) 837
BsuI GTATCC 3 cut(s) 300, 1096, 1974
BsuRI GGCC 8 cut(s) 99, 192, 306, 312, 1022, 1185, 1633, 1816
BtgI CCRYGG 1 cut(s) 307
BtsCI GGATG 4 cut(s) 15, 586, 961, 2023
BtsI GCAGTG 2 cut(s) 516, 1878
BtsIMutI CAGTG 2 cut(s) 516, 1878
BveI ACCTGC 2 cut(s) 1819, 2071
Cac8I GCNNGC 3 cut(s) 1187, 1993, 2074
CaiI CAGNNNCTG 1 cut(s) 2063
CciI TCATGA 1 cut(s) 1132
CfoI GCGC 1 cut(s) 1651
Cfr10I RCCGGY 1 cut(s) 1185
Cfr13I GGNCC 3 cut(s) 98, 986, 1632
CseI GACGC 1 cut(s) 1866
CsiI ACCWGGT 1 cut(s) 621
CspCI CAANNNNNGTGG 4 cut(s) 247, 282, 1497, 1532
CviAII CATG 7 cut(s) 79, 115, 476, 1133, 1376, 1490, 2004
DdeI CTNAG 8 cut(s) 828, 837, 843, 1167, 1440, 1476, 1545, 2056
DpnI GATC 7 cut(s) 140, 587, 671, 690, 944, 1011, 1725
DpnII GATC 7 cut(s) 138, 585, 669, 688, 942, 1009, 1723
EaeI YGGCCR 3 cut(s) 190, 304, 1183
Eam1104I CTCTTC 3 cut(s) 44, 360, 1228
EarI CTCTTC 3 cut(s) 44, 360, 1228
Ecl136II GAGCTC 3 cut(s) 76, 1549, 1663
Eco24I GRGCYC 4 cut(s) 78, 353, 1551, 1665
Eco47I GGWCC 1 cut(s) 986
Eco47III AGCGCT 1 cut(s) 1650
Eco53kI GAGCTC 3 cut(s) 76, 1549, 1663
Eco57I CTGAAG 2 cut(s) 1034, 1341
Eco81I CCTNAGG 1 cut(s) 837
Eco88I CYCGRG 4 cut(s) 71, 371, 1655, 1865
Eco91I GGTNACC 1 cut(s) 1532
EcoICRI GAGCTC 3 cut(s) 76, 1549, 1663
EcoO65I GGTNACC 1 cut(s) 1532
EcoRI GAATTC 1 cut(s) 544
EcoRII CCWGG 3 cut(s) 621, 1139, 1553
EcoT38I GRGCYC 4 cut(s) 78, 353, 1551, 1665
Esp3I CGTCTC 1 cut(s) 1884
FaeI CATG 7 cut(s) 82, 118, 479, 1136, 1379, 1493, 2007
FatI CATG 7 cut(s) 78, 114, 475, 1132, 1375, 1489, 2003
FblI GTMKAC 1 cut(s) 1077
Fnu4HI GCNGC 7 cut(s) 304, 522, 888, 1247, 1652, 1859, 1862
FokI GGATG 4 cut(s) 2, 593, 968, 2030
FriOI GRGCYC 4 cut(s) 78, 353, 1551, 1665
Fsp4HI GCNGC 7 cut(s) 304, 522, 888, 1247, 1652, 1859, 1862
FspBI CTAG 3 cut(s) 660, 753, 1512
GlaI GCGC 1 cut(s) 1650
GluI GCNGC 7 cut(s) 304, 522, 888, 1247, 1652, 1859, 1862
GsaI CCCAGC 4 cut(s) 56, 528, 1324, 1422
HaeII RGCGCY 1 cut(s) 1652
HaeIII GGCC 8 cut(s) 99, 192, 306, 312, 1022, 1185, 1633, 1816
HapII CCGG 5 cut(s) 284, 347, 952, 1186, 1883
HgaI GACGC 1 cut(s) 1866
HhaI GCGC 1 cut(s) 1651
Hin1I GRCGYC 1 cut(s) 1877
Hin1II CATG 7 cut(s) 82, 118, 479, 1136, 1379, 1493, 2007
Hin6I GCGC 1 cut(s) 1649
HinP1I GCGC 1 cut(s) 1649
HindIII AAGCTT 3 cut(s) 591, 635, 966
HinfI GANTC 8 cut(s) 12, 183, 219, 376, 820, 1136, 1300, 1399
HpaII CCGG 5 cut(s) 284, 347, 952, 1186, 1883
Hpy166II GTNNAC 1 cut(s) 1078
Hpy188III TCNNGA 7 cut(s) 373, 673, 707, 784, 946, 1133, 1712
Hpy8I GTNNAC 1 cut(s) 1078
Hpy99I CGWCG 2 cut(s) 68, 398
HpyAV CCTTC 8 cut(s) 208, 256, 262, 328, 1012, 1339, 1373, 1841
HpyCH4III ACNGT 6 cut(s) 391, 439, 631, 1212, 1396, 1899
HpyCH4IV ACGT 2 cut(s) 677, 1526
HpyCH4V TGCA 9 cut(s) 134, 269, 521, 611, 887, 1001, 1153, 1375, 1541
HpyF3I CTNAG 8 cut(s) 828, 837, 843, 1167, 1440, 1476, 1545, 2056
HpySE526I ACGT 2 cut(s) 677, 1526
Hsp92I GRCGYC 1 cut(s) 1877
Hsp92II CATG 7 cut(s) 82, 118, 479, 1136, 1379, 1493, 2007
HspAI GCGC 1 cut(s) 1649
KroI GCCGGC 1 cut(s) 1185
KroNI GCCGGC 1 cut(s) 1187
Kzo9I GATC 7 cut(s) 138, 585, 669, 688, 942, 1009, 1723
LmnI GCTCC 4 cut(s) 39, 973, 1387, 1660
Lsp1109I GCAGC 5 cut(s) 533, 899, 1233, 1638, 1848
LweI GCATC 3 cut(s) 598, 743, 1426
MabI ACCWGGT 1 cut(s) 621
MaeI CTAG 3 cut(s) 660, 753, 1512
MaeII ACGT 2 cut(s) 677, 1526
MaeIII GTNAC 4 cut(s) 602, 625, 1460, 1532
MalI GATC 7 cut(s) 140, 587, 671, 690, 944, 1011, 1725
MboI GATC 7 cut(s) 138, 585, 669, 688, 942, 1009, 1723
MboII GAAGA 9 cut(s) 31, 347, 628, 859, 952, 1027, 1242, 1245, 1965
MflI RGATCY 3 cut(s) 688, 1009, 1723
MhlI GDGCHC 7 cut(s) 78, 353, 564, 1551, 1603, 1665, 1773
MluCI AATT 3 cut(s) 544, 1096, 1201
MlyI GAGTC 3 cut(s) 6, 192, 814
MmeI TCCRAC 5 cut(s) 87, 376, 432, 755, 1818
MroNI GCCGGC 1 cut(s) 1185
MseI TTAA 6 cut(s) 93, 123, 158, 570, 1335, 1413
MspA1I CMGCKG 2 cut(s) 524, 1861
MspI CCGG 5 cut(s) 284, 347, 952, 1186, 1883
MspR9I CCNGG 7 cut(s) 284, 348, 623, 953, 1141, 1555, 1884
Mva1269I GAATGC 1 cut(s) 269
MvaI CCWGG 3 cut(s) 623, 1141, 1555
NaeI GCCGGC 1 cut(s) 1187
NciI CCSGG 4 cut(s) 284, 348, 953, 1884
NdeII GATC 7 cut(s) 138, 585, 669, 688, 942, 1009, 1723
NgoMIV GCCGGC 1 cut(s) 1185
NlaIII CATG 7 cut(s) 82, 118, 479, 1136, 1379, 1493, 2007
NlaIV GGNNCC 4 cut(s) 100, 1705, 1725, 1857
NmeAIII GCCGAG 2 cut(s) 168, 279
NmuCI GTSAC 2 cut(s) 625, 1460
PaeR7I CTCGAG 1 cut(s) 71
PagI TCATGA 1 cut(s) 1132
PcsI WCGNNNNNNNCGW 1 cut(s) 1671
PctI GAATGC 1 cut(s) 269
PdiI GCCGGC 1 cut(s) 1187
PfeI GAWTC 5 cut(s) 219, 376, 1136, 1300, 1399
PflFI GACNNNGTC 1 cut(s) 823
PkrI GCNGC 7 cut(s) 305, 523, 889, 1248, 1653, 1860, 1863
PleI GAGTC 3 cut(s) 6, 191, 814
PpsI GAGTC 3 cut(s) 6, 191, 814
PshAI GACNNNNGTC 1 cut(s) 1467
Psp124BI GAGCTC 3 cut(s) 78, 1551, 1665
Psp6I CCWGG 3 cut(s) 621, 1139, 1553
PspEI GGTNACC 1 cut(s) 1532
PspFI CCCAGC 4 cut(s) 52, 524, 1320, 1418
PspGI CCWGG 3 cut(s) 621, 1139, 1553
PspN4I GGNNCC 4 cut(s) 100, 1705, 1725, 1857
PspPI GGNCC 3 cut(s) 98, 986, 1632
PspXI VCTCGAGB 1 cut(s) 71
PstI CTGCAG 1 cut(s) 523
PstNI CAGNNNCTG 1 cut(s) 2063
PsuI RGATCY 3 cut(s) 688, 1009, 1723
PsyI GACNNNGTC 1 cut(s) 823
PvuII CAGCTG 1 cut(s) 524
SacI GAGCTC 3 cut(s) 78, 1551, 1665
SaqAI TTAA 6 cut(s) 93, 123, 158, 570, 1335, 1413
SatI GCNGC 7 cut(s) 304, 522, 888, 1247, 1652, 1859, 1862
Sau3AI GATC 7 cut(s) 138, 585, 669, 688, 942, 1009, 1723
Sau96I GGNCC 3 cut(s) 98, 986, 1632
ScaI AGTACT 2 cut(s) 1289, 1924
SchI GAGTC 3 cut(s) 6, 192, 814
ScrFI CCNGG 7 cut(s) 284, 348, 623, 953, 1141, 1555, 1884
SduI GDGCHC 7 cut(s) 78, 353, 564, 1551, 1603, 1665, 1773
SexAI ACCWGGT 1 cut(s) 621
SfaNI GCATC 3 cut(s) 598, 743, 1426
SfcI CTRYAG 1 cut(s) 519
Sfr274I CTCGAG 1 cut(s) 71
SinI GGWCC 1 cut(s) 986
SlaI CTCGAG 1 cut(s) 71
SmlI CTYRAG 3 cut(s) 71, 1610, 1772
SmoI CTYRAG 3 cut(s) 71, 1610, 1772
Sse9I AATT 3 cut(s) 544, 1096, 1201
SsiI CCGC 8 cut(s) 223, 238, 261, 303, 1115, 1859, 1911, 2076
SspMI CTAG 3 cut(s) 660, 753, 1512
SstI GAGCTC 3 cut(s) 78, 1551, 1665
StyD4I CCNGG 7 cut(s) 282, 346, 621, 951, 1139, 1553, 1882
TaaI ACNGT 6 cut(s) 391, 439, 631, 1212, 1396, 1899
TaiI ACGT 2 cut(s) 680, 1529
TaqI TCGA 6 cut(s) 72, 141, 432, 450, 548, 1674
TasI AATT 3 cut(s) 544, 1096, 1201
TatI WGTACW 7 cut(s) 81, 439, 652, 1287, 1368, 1922, 1948
TauI GCSGC 2 cut(s) 306, 1861
TfiI GAWTC 5 cut(s) 219, 376, 1136, 1300, 1399
Tru1I TTAA 6 cut(s) 93, 123, 158, 570, 1335, 1413
Tru9I TTAA 6 cut(s) 93, 123, 158, 570, 1335, 1413
TscAI CASTG 2 cut(s) 523, 1878
TseFI GTSAC 2 cut(s) 625, 1460
TseI GCWGC 5 cut(s) 521, 887, 1246, 1651, 1861
Tsp45I GTSAC 2 cut(s) 625, 1460
TspDTI ATGAA 8 cut(s) 803, 1149, 1391, 1392, 1460, 1908, 1944, 1965
TspGWI ACGGA 1 cut(s) 165
TspRI CASTG 2 cut(s) 523, 1878
Tth111I GACNNNGTC 1 cut(s) 823
VpaK11BI GGWCC 1 cut(s) 986
XapI RAATTY 3 cut(s) 544, 1096, 1201
XhoI CTCGAG 1 cut(s) 71
XmiI GTMKAC 1 cut(s) 1077
XspI CTAG 3 cut(s) 660, 753, 1512
ZrmI AGTACT 2 cut(s) 1289, 1924
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.