Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0008715

Physical Location & Seq

Genomic Coordinates Reverse (-)

48075917 .. 48080966

Gene Structure 5050 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG347400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

ATGGAGAAGCTGAAGTCTTTAGTTCCCGAGACCCTAAAGCAAATGATCGCAGAGAGCACTACTGACGATCTGCCCAGCACGTGTTCTTCTCTCCTCGACTTCCTTCTCCATTTCGAGCCGTTCCAGCAAATGGTTAATGACCTGACGGACCCGGAAGTTGCGCTGTGTGGGAAGAATAAAGAGGATGCTTTGGAGAGTAAGCAGAAGGGGAATAGGTGCTTCTTGAGTGGTGATTATGCTAATGCTTTGGATTTCTATACCCAGGCATTGCGAGTTGCTCCAGTGGATGCATATGAACAAGACCGAAATCTGGTTGCTACCTTGTATGTGAATCGGGCTTCTGTATTGCATAAAATGGGGCTTGTGAGGGAGTGTGTAAGAGACTGCAACCGGGCGCTTCGGATTTCTTCAAACTATGCAAAGGCATGGTTTAGAAGAGGTAAGGCAAATGCATCTATGGGAAAATATGAGGATGCAATACGGGACTTGGATGTAGCAAAGATTGCGGAGTCATCACTTGGTGGGAAGAAACAGATAGAAAGTGAGATGAAGATAGTTTTGGACCAACAGTATAAAGCAGCAAGTCCATCGACACGACATAATCAGAATAACTCAAATATGTTGGATGAACCACACCAAATGAAATTACAATGTGTCAACACACCCGAGAAAGGAAAGGGTTTGGCTTCCACGGTGGACATTCCTCAAGCATCCTTGGTACATACCGAAGACCCTTTTGCAACGATAATATTAAAGCATTGCCGGGAAACACATTGCCACTACTGCTTGAATGAACTACCAGCAGATAAAGTCCCATGTACATCATGTTCAATACCATGGTATTGCTCCCAGAAATGCTGTATAGAGGCAGGAGGAGAAATGTGCTGCGATTACCCAAACAATCAAAGCATTCATAAGGATCTACCAGACGACCTTCAGAAGTACATCGTGGAGGCCACTTTAATTGCTGATTCTGAAAGAGATAATCAGATTTCTGAACATAAGCATGAATGTAAAGGTGTACCCTGGCCAGCAGTATTGCCTTCTGAGATAGTTTTGGCTGGTCGAGTACTAGTCAACTCTATAATCAAAAGAGGAGGTTCCACAGATAGTATTAATCTCGGAGAAATTTCGGATCTTTCTCATCATTATTCAAAAATGCCTCCTGAATCGAAATTGGAATTACATATATACTCTGCTGTATTATCATGCTGTCTGCAACATTGTAATGGCTTTGAAATACCAATAAACGGGATCTCCATTTCACAGATTGTCATACTTATATCCCAAATTAGGGTGAACTCTATGACAGTTGTTCGTATGAAATTCATTGACCAGCATGAACTAGTAGATCAGTTTGGAAATCTGTCATCTTGGGAAGGAGGTCCAACCAGTAATGTGGAACAGGTCAGAGTAGGTCAAGCTATCTATGCATCAGGAAGCTTGTTCAACCATTCTTGTCGACCTAACATCCATGCTTATTTCCTTTCACGCACTCTTCATATACGAACTACAGAATATGTCTCAGCAGGGTGTCCCCTTGAGTTGTCCTATGGTCCGCAGGTTGGGCAGTGGGATTGTAAGGACAGGATTAAGTTTCTGGAAGATGAGTACTCATTTCGATGTCAGTGCACTGGTTGTTCAAAAATGAACTTTTCAGACTTAGTGCTAAATGCGTTTCACTGTGTGAAGCTGAACTGTTCTGGCATAGTCTTGGAGAGCTCTGTTATTAACTGTGAAAAAGAGAAACTTAAGCACTTACCGAACATCATCAACACTGACAGCATCGTCTCTCTTCTTCAGGCTGAAGAGCTCAATATTGATGACATCAATAAAGCTGCAAATGATATGCAAATCAATAGCTTTTACCAGTTAAATCCTGGCTACTGTCTAAAATGTGGTTCTTATCGTGATCTAGAATCTTCCTCTGTAGCTGCAAATAACTGTATCAGAAGATTACAGAATTCAATAGACTCAAAAAATGTCTCTAGTACCATGCTTTTGGGTGCTTTAAGTTCTCTTGGTGTGCTGAGATCAACTTTGCATGCATATAATAGAAGAATTGCAGAGGCAGAAGATAATTTTGCACAAGCATTTTGTTTGGTCGGAGAGTTGCAACCTGCAATGGAGCACTGTAAAGCATCAATTGAGATCCTGGAAAAGCTCTATAACCGTAATCACATTGTTATTGGATATGAACTTGTGAAGCTCTCATCTATCCAGTTATCATTGCGTGACAGTGGTGCCGTGGACAGCATAGATCGACTCTATCAAATATTTTCATGTTATTATGGATCACACACAGACGTCATTTTCCCAGATCTTCAATTCCTCAGAAAAGAGGGGCAGGCCTATTTTGCCGAGTATCAACTCACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SET TPR_8 zf-MYND

Protein Analysis

792

Amino Acids

88.72

Weight (kDa)

5.8

Isoelectric Point (pI)

46.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008715)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33400 AT1G33400 AT1G33400
fragaria_vesca	FvH4_7g26380
malus_domestica	MD07G1239100.v1.1
prunus_persica	Prupe.2G267900_v2.0.a1 Prupe.2G267900_v2.0.a1 Prupe.2G267900_v2.0.a1 Prupe.2G267900_v2.0.a1 Prupe.2G267900_v2.0.a1
pyrus_communis	pycom07g21510
rosa_chinensis	RchiOBHm_Chr1g0372931
rosa_laevigata	RLG00000026865
rosa_multiflora	Rmu_sc0022491.1_g000001 Rmu_sc0026741.1_g000001 Rmu_ssc0000425.1_g000016
rosa_roxburghii	Rroxscaffold_4G00284600
rosa_rugosa	Rorug01G0375000
rosa_samantha	Rh1AG383500 Rh1BG347400 Rh1CG360800 Rh1DG378300
rosa_wichuraiana	Rw1G033790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1787
AatII	GACGTC	1 cut(s)	2310
Acc36I	ACCTGC	2 cut(s)	1552, 2128
AccB1I	GGYRCC	1 cut(s)	2243
AccB7I	CCANNNNNTGG	1 cut(s)	130
AccI	GTMKAC	1 cut(s)	1462
AciI	CCGC	2 cut(s)	506, 1559
AclWI	GGATC	5 cut(s)	927, 1143, 1262, 2146, 2302
AcoI	YGGCCR	1 cut(s)	1028
AcsI	RAATTY	3 cut(s)	1128, 1325, 1963
AcuI	CTGAAG	4 cut(s)	32, 920, 1784, 1827
AcvI	CACGTG	1 cut(s)	81
AcyI	GRCGYC	1 cut(s)	2307
AdeI	CACNNNGTG	2 cut(s)	521, 1687
AfaI	GTAC	7 cut(s)	720, 820, 944, 1023, 1071, 1613, 1993
AfiI	CCNNNNNNNGG	7 cut(s)	130, 310, 671, 1250, 1293, 1294, 1565
AflII	CTTAAG	1 cut(s)	1751
AflIII	ACRYGT	1 cut(s)	80
AgsI	TTSAA	9 cut(s)	411, 790, 831, 1155, 1238, 1450, 1644, 1968, 2327
AhlI	ACTAGT	2 cut(s)	1072, 1345
AjnI	CCWGG	4 cut(s)	261, 1025, 1879, 2154
AjuI	GAANNNNNNNTTGG	2 cut(s)	542, 574
Alw21I	GWGCWC	5 cut(s)	59, 1634, 1724, 1815, 2133
Alw26I	GTCTC	5 cut(s)	23, 375, 1528, 1795, 1990
Alw44I	GTGCAC	1 cut(s)	1630
AlwI	GGATC	5 cut(s)	927, 1143, 1262, 2146, 2302
Ama87I	CYCGRG	2 cut(s)	26, 665
AoxI	GGCC	3 cut(s)	954, 1028, 2349
ApaLI	GTGCAC	1 cut(s)	1630
ApeKI	GCWGC	4 cut(s)	578, 885, 1838, 1934
ApoI	RAATTY	3 cut(s)	1128, 1325, 1963
AseI	ATTAAT	1 cut(s)	1116
AspLEI	GCGC	2 cut(s)	163, 397
AspS9I	GGNCC	4 cut(s)	148, 562, 1385, 1556
AsuC2I	CCSGG	3 cut(s)	152, 392, 764
AsuHPI	GGTGA	2 cut(s)	242, 1309
AvaI	CYCGRG	2 cut(s)	26, 665
AvaII	GGWCC	4 cut(s)	148, 562, 1385, 1556
BaeGI	GKGCMC	1 cut(s)	1634
BalI	TGGCCA	1 cut(s)	1030
BanI	GGYRCC	1 cut(s)	2243
BanII	GRGCYC	2 cut(s)	1724, 1815
BbrPI	CACGTG	1 cut(s)	81
BbsI	GAAGAC	1 cut(s)	735
Bbv12I	GWGCWC	5 cut(s)	59, 1634, 1724, 1815, 2133
BbvI	GCAGC	4 cut(s)	590, 872, 1825, 1921
BccI	CCATC	1 cut(s)	595
BceAI	ACGGC	2 cut(s)	103, 2231
BcgI	CGANNNNNNTGC	4 cut(s)	570, 604, 1611, 1645
BciT130I	CCWGG	4 cut(s)	263, 1027, 1881, 2156
BcnI	CCSGG	3 cut(s)	152, 392, 764
BcoDI	GTCTC	5 cut(s)	23, 375, 1528, 1795, 1990
BcuI	ACTAGT	2 cut(s)	1072, 1345
BfaI	CTAG	4 cut(s)	1073, 1346, 1916, 1989
BfmI	CTRYAG	2 cut(s)	1512, 1929
BfoI	RGCGCY	1 cut(s)	398
BfrI	CTTAAG	1 cut(s)	1751
BfuAI	ACCTGC	2 cut(s)	1552, 2128
BglII	AGATCT	1 cut(s)	2320
BisI	GCNGC	4 cut(s)	579, 886, 1839, 1935
BlsI	GCNGC	4 cut(s)	580, 887, 1840, 1936
BmcAI	AGTACT	2 cut(s)	1071, 1613
Bme1390I	CCNGG	7 cut(s)	152, 263, 392, 764, 1027, 1881, 2156
Bme18I	GGWCC	4 cut(s)	148, 562, 1385, 1556
BmeT110I	CYCGRG	2 cut(s)	26, 665
BmgT120I	GGNCC	4 cut(s)	148, 562, 1385, 1556
BmiI	GGNNCC	3 cut(s)	150, 1102, 2245
BmrFI	CCNGG	7 cut(s)	152, 263, 392, 764, 1027, 1881, 2156
BmsI	GCATC	8 cut(s)	175, 277, 461, 463, 719, 1442, 1794, 2150
BpiI	GAAGAC	1 cut(s)	735
BpmI	CTGGAG	1 cut(s)	264
BpuEI	CTTGAG	3 cut(s)	244, 690, 1562
BpuMI	CCSGG	3 cut(s)	152, 392, 764
BsaAI	YACGTR	1 cut(s)	81
BsaHI	GRCGYC	1 cut(s)	2307
BsaI	GGTCTC	1 cut(s)	23
BsaJI	CCNNGG	6 cut(s)	261, 690, 714, 836, 1025, 2247
BsaXI	ACNNNNNCTCC	2 cut(s)	1241, 1271
Bsc4I	CCNNNNNNNGG	7 cut(s)	130, 310, 671, 1250, 1293, 1294, 1565
Bse1I	ACTGG	5 cut(s)	281, 1392, 1639, 1870, 2221
Bse3DI	GCAATG	5 cut(s)	266, 757, 772, 2130, 2228
BseBI	CCWGG	4 cut(s)	263, 1027, 1881, 2156
BseDI	CCNNGG	6 cut(s)	261, 690, 714, 836, 1025, 2247
BseGI	GGATG	7 cut(s)	190, 292, 478, 496, 631, 710, 1470
BseLI	CCNNNNNNNGG	7 cut(s)	130, 310, 671, 1250, 1293, 1294, 1565
BseMI	GCAATG	5 cut(s)	266, 757, 772, 2130, 2228
BseMII	CTCAG	4 cut(s)	1038, 1539, 2021, 2347
BseNI	ACTGG	5 cut(s)	281, 1392, 1639, 1870, 2221
BseRI	GAGGAG	3 cut(s)	83, 888, 1110
BseSI	GKGCMC	1 cut(s)	1634
BseXI	GCAGC	4 cut(s)	590, 872, 1825, 1921
BseYI	CCCAGC	1 cut(s)	74
BshFI	GGCC	3 cut(s)	956, 1030, 2351
BshNI	GGYRCC	1 cut(s)	2243
BsiHKAI	GWGCWC	5 cut(s)	59, 1634, 1724, 1815, 2133
BsiHKCI	CYCGRG	2 cut(s)	26, 665
BsiSI	CCGG	3 cut(s)	152, 391, 763
BslFI	GGGAC	3 cut(s)	497, 797, 1521
BslI	CCNNNNNNNGG	7 cut(s)	130, 310, 671, 1250, 1293, 1294, 1565
BsmAI	GTCTC	5 cut(s)	23, 375, 1528, 1795, 1990
BsmBI	CGTCTC	1 cut(s)	1795
BsmFI	GGGAC	3 cut(s)	497, 797, 1521
BsmI	GAATGC	1 cut(s)	909
BsnI	GGCC	3 cut(s)	956, 1030, 2351
Bso31I	GGTCTC	1 cut(s)	23
BsoBI	CYCGRG	2 cut(s)	26, 665
Bsp1286I	GDGCHC	5 cut(s)	59, 1634, 1724, 1815, 2133
Bsp1407I	TGTACA	1 cut(s)	818
Bsp19I	CCATGG	1 cut(s)	836
BspACI	CCGC	2 cut(s)	506, 1559
BspANI	GGCC	3 cut(s)	956, 1030, 2351
BspCNI	CTCAG	4 cut(s)	1039, 1538, 2022, 2346
BspLI	GGNNCC	3 cut(s)	150, 1102, 2245
BspMI	ACCTGC	2 cut(s)	1552, 2128
BspPI	GGATC	5 cut(s)	927, 1143, 1262, 2146, 2302
BspQI	GCTCTTC	1 cut(s)	1803
BspT107I	GGYRCC	1 cut(s)	2243
BspTI	CTTAAG	1 cut(s)	1751
BspTNI	GGTCTC	1 cut(s)	23
BsrDI	GCAATG	5 cut(s)	266, 757, 772, 2130, 2228
BsrGI	TGTACA	1 cut(s)	818
BsrI	ACTGG	5 cut(s)	281, 1392, 1639, 1870, 2221
BssECI	CCNNGG	6 cut(s)	261, 690, 714, 836, 1025, 2247
BssNI	GRCGYC	1 cut(s)	2307
BssT1I	CCWWGG	2 cut(s)	714, 836
Bst2UI	CCWGG	4 cut(s)	263, 1027, 1881, 2156
Bst6I	CTCTTC	4 cut(s)	430, 1503, 1800, 1803
BstACI	GRCGYC	1 cut(s)	2307
BstAFI	CTTAAG	1 cut(s)	1751
BstAPI	GCANNNNNTGC	1 cut(s)	503
BstAUI	TGTACA	1 cut(s)	818
BstBAI	YACGTR	1 cut(s)	81
BstC8I	GCNNGC	3 cut(s)	1032, 2046, 2349
BstDEI	CTNAG	5 cut(s)	1047, 1525, 1663, 2030, 2333
BstDSI	CCRYGG	3 cut(s)	690, 836, 2247
BstF5I	GGATG	7 cut(s)	190, 292, 478, 496, 631, 710, 1470
BstH2I	RGCGCY	1 cut(s)	398
BstHHI	GCGC	2 cut(s)	163, 397
BstMAI	GTCTC	5 cut(s)	23, 375, 1528, 1795, 1990
BstMWI	GCNNNNNNNGC	6 cut(s)	124, 503, 783, 1430, 1567, 2357
BstNI	CCWGG	4 cut(s)	263, 1027, 1881, 2156
BstNSI	RCATGY	1 cut(s)	2048
BstSCI	CCNGG	7 cut(s)	150, 261, 390, 762, 1025, 1879, 2154
BstSFI	CTRYAG	2 cut(s)	1512, 1929
BstSLI	GKGCMC	1 cut(s)	1634
BstV1I	GCAGC	4 cut(s)	590, 872, 1825, 1921
BstV2I	GAAGAC	1 cut(s)	735
BstX2I	RGATCY	5 cut(s)	919, 1135, 1254, 2151, 2320
BstXI	CCANNNNNNTGG	2 cut(s)	1399, 2002
BstYI	RGATCY	5 cut(s)	919, 1135, 1254, 2151, 2320
BsuRI	GGCC	3 cut(s)	956, 1030, 2351
BtgI	CCRYGG	3 cut(s)	690, 836, 2247
BtsCI	GGATG	7 cut(s)	190, 292, 478, 496, 631, 710, 1470
BtsI	GCAGTG	1 cut(s)	1577
BtsIMutI	CAGTG	8 cut(s)	288, 1577, 1632, 1634, 1681, 1776, 2131, 2245
BveI	ACCTGC	2 cut(s)	1552, 2128
Cac8I	GCNNGC	3 cut(s)	1032, 2046, 2349
CfoI	GCGC	2 cut(s)	163, 397
Cfr13I	GGNCC	4 cut(s)	148, 562, 1385, 1556
Csp6I	GTAC	7 cut(s)	719, 819, 943, 1022, 1070, 1612, 1992
CspCI	CAANNNNNGTGG	2 cut(s)	946, 981
CviQI	GTAC	7 cut(s)	719, 819, 943, 1022, 1070, 1612, 1992
DdeI	CTNAG	5 cut(s)	1047, 1525, 1663, 2030, 2333
DraIII	CACNNNGTG	2 cut(s)	521, 1687
DrdI	GACNNNNNNGTC	1 cut(s)	1787
DseDI	GACNNNNNNGTC	1 cut(s)	1787
EaeI	YGGCCR	1 cut(s)	1028
Eam1104I	CTCTTC	4 cut(s)	430, 1503, 1800, 1803
EarI	CTCTTC	4 cut(s)	430, 1503, 1800, 1803
Ecl136II	GAGCTC	2 cut(s)	1722, 1813
Eco130I	CCWWGG	2 cut(s)	714, 836
Eco147I	AGGCCT	1 cut(s)	2351
Eco24I	GRGCYC	2 cut(s)	1724, 1815
Eco31I	GGTCTC	1 cut(s)	23
Eco47I	GGWCC	4 cut(s)	148, 562, 1385, 1556
Eco53kI	GAGCTC	2 cut(s)	1722, 1813
Eco57I	CTGAAG	4 cut(s)	32, 920, 1784, 1827
Eco72I	CACGTG	1 cut(s)	81
Eco88I	CYCGRG	2 cut(s)	26, 665
EcoICRI	GAGCTC	2 cut(s)	1722, 1813
EcoRI	GAATTC	1 cut(s)	1963
EcoRII	CCWGG	4 cut(s)	261, 1025, 1879, 2154
EcoT14I	CCWWGG	2 cut(s)	714, 836
EcoT22I	ATGCAT	4 cut(s)	292, 454, 1435, 2050
EcoT38I	GRGCYC	2 cut(s)	1724, 1815
ErhI	CCWWGG	2 cut(s)	714, 836
Esp3I	CGTCTC	1 cut(s)	1795
FalI	AAGNNNNNCTT	2 cut(s)	1734, 1766
FaqI	GGGAC	3 cut(s)	497, 797, 1521
FauNDI	CATATG	1 cut(s)	292
FblI	GTMKAC	1 cut(s)	1462
Fnu4HI	GCNGC	4 cut(s)	579, 886, 1839, 1935
FokI	GGATG	7 cut(s)	197, 299, 485, 503, 638, 697, 1457
FriOI	GRGCYC	2 cut(s)	1724, 1815
Fsp4HI	GCNGC	4 cut(s)	579, 886, 1839, 1935
FspBI	CTAG	4 cut(s)	1073, 1346, 1916, 1989
GlaI	GCGC	2 cut(s)	162, 396
GluI	GCNGC	4 cut(s)	579, 886, 1839, 1935
GsaI	CCCAGC	1 cut(s)	78
GsuI	CTGGAG	1 cut(s)	264
HaeII	RGCGCY	1 cut(s)	398
HaeIII	GGCC	3 cut(s)	956, 1030, 2351
HapII	CCGG	3 cut(s)	152, 391, 763
HhaI	GCGC	2 cut(s)	163, 397
Hin1I	GRCGYC	1 cut(s)	2307
Hin6I	GCGC	2 cut(s)	161, 395
HinP1I	GCGC	2 cut(s)	161, 395
HincII	GTYRAC	3 cut(s)	658, 1078, 1463
HindII	GTYRAC	3 cut(s)	658, 1078, 1463
HindIII	AAGCTT	1 cut(s)	1441
HinfI	GANTC	7 cut(s)	331, 509, 971, 1169, 1919, 1973, 2265
HpaII	CCGG	3 cut(s)	152, 391, 763
HphI	GGTGA	2 cut(s)	242, 1309
Hpy166II	GTNNAC	8 cut(s)	658, 697, 1022, 1078, 1300, 1463, 1632, 2251
Hpy188III	TCNNGA	7 cut(s)	26, 223, 1166, 1437, 1601, 1910, 1916
Hpy8I	GTNNAC	8 cut(s)	658, 697, 1022, 1078, 1300, 1463, 1632, 2251
HpyAV	CCTTC	5 cut(s)	113, 199, 944, 1053, 1373
HpyCH4IV	ACGT	2 cut(s)	80, 2307
HpyF10VI	GCNNNNNNNGC	6 cut(s)	124, 503, 783, 1430, 1567, 2357
HpyF3I	CTNAG	5 cut(s)	1047, 1525, 1663, 2030, 2333
HpySE526I	ACGT	2 cut(s)	80, 2307
Hsp92I	GRCGYC	1 cut(s)	2307
HspAI	GCGC	2 cut(s)	161, 395
LguI	GCTCTTC	1 cut(s)	1803
LmnI	GCTCC	3 cut(s)	283, 851, 2128
Lsp1109I	GCAGC	4 cut(s)	590, 872, 1825, 1921
LweI	GCATC	8 cut(s)	175, 277, 461, 463, 719, 1442, 1794, 2150
MaeI	CTAG	4 cut(s)	1073, 1346, 1916, 1989
MaeII	ACGT	2 cut(s)	80, 2307
MaeIII	GTNAC	1 cut(s)	2234
MfeI	CAATTG	1 cut(s)	2145
MflI	RGATCY	5 cut(s)	919, 1135, 1254, 2151, 2320
MhlI	GDGCHC	5 cut(s)	59, 1634, 1724, 1815, 2133
MlsI	TGGCCA	1 cut(s)	1030
MluNI	TGGCCA	1 cut(s)	1030
MlyI	GAGTC	3 cut(s)	518, 1967, 2259
MmeI	TCCRAC	3 cut(s)	603, 1412, 2086
Mox20I	TGGCCA	1 cut(s)	1030
Mph1103I	ATGCAT	4 cut(s)	292, 454, 1435, 2050
MscI	TGGCCA	1 cut(s)	1030
MseI	TTAA	9 cut(s)	135, 752, 962, 1116, 1593, 1731, 1752, 1874, 2012
MslI	CAYNNNNRTG	3 cut(s)	1005, 1227, 1621
Msp20I	TGGCCA	1 cut(s)	1030
MspCI	CTTAAG	1 cut(s)	1751
MspI	CCGG	3 cut(s)	152, 391, 763
MspR9I	CCNGG	7 cut(s)	152, 263, 392, 764, 1027, 1881, 2156
MunI	CAATTG	1 cut(s)	2145
Mva1269I	GAATGC	1 cut(s)	909
MvaI	CCWGG	4 cut(s)	263, 1027, 1881, 2156
MwoI	GCNNNNNNNGC	6 cut(s)	124, 503, 783, 1430, 1567, 2357
NciI	CCSGG	3 cut(s)	152, 392, 764
NcoI	CCATGG	1 cut(s)	836
NdeI	CATATG	1 cut(s)	292
NlaIV	GGNNCC	3 cut(s)	150, 1102, 2245
NmuCI	GTSAC	1 cut(s)	2234
NsiI	ATGCAT	4 cut(s)	292, 454, 1435, 2050
NspI	RCATGY	1 cut(s)	2048
PaeI	GCATGC	1 cut(s)	2048
PceI	AGGCCT	1 cut(s)	2351
PciSI	GCTCTTC	1 cut(s)	1803
PctI	GAATGC	1 cut(s)	909
PfeI	GAWTC	4 cut(s)	331, 971, 1169, 1919
PflMI	CCANNNNNTGG	1 cut(s)	130
PfoI	TCCNGGA	1 cut(s)	2154
PkrI	GCNGC	4 cut(s)	580, 887, 1840, 1936
PleI	GAGTC	3 cut(s)	517, 1967, 2259
PmaCI	CACGTG	1 cut(s)	81
PmlI	CACGTG	1 cut(s)	81
PpsI	GAGTC	3 cut(s)	517, 1967, 2259
Ppu21I	YACGTR	1 cut(s)	81
PshBI	ATTAAT	1 cut(s)	1116
Psp124BI	GAGCTC	2 cut(s)	1724, 1815
Psp6I	CCWGG	4 cut(s)	261, 1025, 1879, 2154
PspCI	CACGTG	1 cut(s)	81
PspFI	CCCAGC	1 cut(s)	74
PspGI	CCWGG	4 cut(s)	261, 1025, 1879, 2154
PspN4I	GGNNCC	3 cut(s)	150, 1102, 2245
PspPI	GGNCC	4 cut(s)	148, 562, 1385, 1556
PsrI	GAACNNNNNNTAC	2 cut(s)	811, 843
PsuI	RGATCY	5 cut(s)	919, 1135, 1254, 2151, 2320
RsaI	GTAC	7 cut(s)	720, 820, 944, 1023, 1071, 1613, 1993
RsaNI	GTAC	7 cut(s)	719, 819, 943, 1022, 1070, 1612, 1992
RseI	CAYNNNNRTG	3 cut(s)	1005, 1227, 1621
SacI	GAGCTC	2 cut(s)	1724, 1815
SalI	GTCGAC	1 cut(s)	1461
SapI	GCTCTTC	1 cut(s)	1803
SaqAI	TTAA	9 cut(s)	135, 752, 962, 1116, 1593, 1731, 1752, 1874, 2012
SatI	GCNGC	4 cut(s)	579, 886, 1839, 1935
Sau96I	GGNCC	4 cut(s)	148, 562, 1385, 1556
ScaI	AGTACT	2 cut(s)	1071, 1613
SchI	GAGTC	3 cut(s)	518, 1967, 2259
ScrFI	CCNGG	7 cut(s)	152, 263, 392, 764, 1027, 1881, 2156
SduI	GDGCHC	5 cut(s)	59, 1634, 1724, 1815, 2133
SfaNI	GCATC	8 cut(s)	175, 277, 461, 463, 719, 1442, 1794, 2150
SfcI	CTRYAG	2 cut(s)	1512, 1929
SinI	GGWCC	4 cut(s)	148, 562, 1385, 1556
SmiMI	CAYNNNNRTG	3 cut(s)	1005, 1227, 1621
SmlI	CTYRAG	4 cut(s)	223, 705, 1541, 1751
SmoI	CTYRAG	4 cut(s)	223, 705, 1541, 1751
SpeI	ACTAGT	2 cut(s)	1072, 1345
SphI	GCATGC	1 cut(s)	2048
SseBI	AGGCCT	1 cut(s)	2351
SsiI	CCGC	2 cut(s)	506, 1559
SspI	AATATT	3 cut(s)	750, 1819, 2277
SspMI	CTAG	4 cut(s)	1073, 1346, 1916, 1989
SstI	GAGCTC	2 cut(s)	1724, 1815
StuI	AGGCCT	1 cut(s)	2351
StyD4I	CCNGG	7 cut(s)	150, 261, 390, 762, 1025, 1879, 2154
StyI	CCWWGG	2 cut(s)	714, 836
TaiI	ACGT	2 cut(s)	83, 2310
TaqI	TCGA	8 cut(s)	96, 114, 590, 1066, 1172, 1462, 1621, 2263
TaqII	GACCGA	1 cut(s)	318
TatI	WGTACW	4 cut(s)	818, 942, 1069, 1611
TfiI	GAWTC	4 cut(s)	331, 971, 1169, 1919
Tru1I	TTAA	9 cut(s)	135, 752, 962, 1116, 1593, 1731, 1752, 1874, 2012
Tru9I	TTAA	9 cut(s)	135, 752, 962, 1116, 1593, 1731, 1752, 1874, 2012
TscAI	CASTG	8 cut(s)	288, 1577, 1634, 1639, 1688, 1783, 2138, 2245
TseFI	GTSAC	1 cut(s)	2234
TseI	GCWGC	4 cut(s)	578, 885, 1838, 1934
Tsp45I	GTSAC	1 cut(s)	2234
TspGWI	ACGGA	1 cut(s)	161
TspRI	CASTG	8 cut(s)	288, 1577, 1634, 1639, 1688, 1783, 2138, 2245
Van91I	CCANNNNNTGG	1 cut(s)	130
Vha464I	CTTAAG	1 cut(s)	1751
VneI	GTGCAC	1 cut(s)	1630
VpaK11BI	GGWCC	4 cut(s)	148, 562, 1385, 1556
VspI	ATTAAT	1 cut(s)	1116
XapI	RAATTY	3 cut(s)	1128, 1325, 1963
XbaI	TCTAGA	1 cut(s)	1915
XceI	RCATGY	1 cut(s)	2048
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1877
XmiI	GTMKAC	1 cut(s)	1462
XspI	CTAG	4 cut(s)	1073, 1346, 1916, 1989
ZraI	GACGTC	1 cut(s)	2308
ZrmI	AGTACT	2 cut(s)	1071, 1613
Zsp2I	ATGCAT	4 cut(s)	292, 454, 1435, 2050

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.