Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0015808

Physical Location & Seq

Genomic Coordinates Forward (+)

49147457 .. 49149995

Gene Structure 2539 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0377900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

ATGGCCGTTACTCCCAACCTCCGCCTCTTAACGGCGTCGCTGCTGCTCCTTTCGTGCGCGTGGACCTCACTCTCCGTCCAGCTCTGCCCACCCTGCGGCAACACCACCGTCCCCTACCCTCTCAGCACCTCCCCCACCTGCGGTGACCAGTCATACAAGATCCGCCGCGGGCTCCCTCCTCCTCGACACCCTCAACAACTCCTACCCGATCGCCTCCATCTCCCCCTCCGCCCAACGACTCGTCGTACGCCCCTCCAGCTTCGTGTCGTCCAACTCCTGCGTCACGTCGGATATCGTCCACCAGGGAATCCAGCTCAACGACTCCCTCCCCTTCAACGTCACCACGCTTATACGAGTTTTGTGAATTTGGATCCGGTTTTGCCCGTGAACCGGTGGCCCGAACCGGGAGTGGAGATACAGTGGGTGGCGCCGAGGGAGCCGGTGTGTACTGCGCAGTCGGATTGTGACGGGAAGTCTGTGTGTGGATCCGACCCGGTTCAGAATGGGGTGCGGAGGTGCTTCTGTAACTCCGGGTTTACGTGGGACCCCGTTTCAGGGTTTTGCGTTGATGATAGTGTTGGTTCAAAGGACAGGACTGGACTAATAGCAGGTTTGACTTCTGGCATTGGCGCATCACTACTTGCAGCCATCATTGCCATTGTACTTTACAAGCGCCACAGGCGCATCAAAGAAGCTCAAGACCGCCTGACCAAAGAGCGTGAAGCAATCCTAAATGCCAATGGAGGCAGAGCAGCAAAAGTCTTCACCGGAAAAGATATTAAAAAGGCAACAAACAACTTCTCCAGAGACCTCCTCTTAGGTGCTGGTGGATATGGTGAAGTCTACAAAGGAACGCTCGAAGATGGCACTGTCGTGGCTGTGAAGATCGCGAAGATTGGAAACACAAAAGGCACTGACCAAGTCCTCAATGAGGTCCGAATTCTGTGCCAAGTTAACCACAGGAGTCTTGTGCACTTACTCGGTTGTTGTGTGGAGTTAGAGCAGCCTATTATGGTTTATGAGTACATTGAGAATGGAACTCTACTTGAGCATTTCCAAGCTCGAAAAGGTGTTGGTCGAACACCTCTCTCGTGGACTCAACGTCTCCAAATTGCTCATGACACTGCTGAGGGTCTTGCTTATCTCCACTTCTCAGCTGTCCCTCCAATTTATCACCGTGACGTCAAGTCTAGTAACATTCTTCTTGATAACAAATTGAATGCCAAGGTTGCTGATTTTGGACTATCACGATTGGCTCATACTGATATGAGTCACATTTCAACATGTGCTCAGGGAACTCTTGGATACCTTGATCCTGAATATTACAGAAATTATCAATTGACTGATAAGAGTGATGTCTACAGCTTTGGTGTGGTGCTGTTGGAGCTGATGTCCTCGCAGAAAGCTATAGACTTCAACAGGGACCCCGATGATGTGAACCTTGCAGTTTATGTGCAGAGGCTGATGGCGGAAGAGAAGTTAATGGATGCGATTGATCCAATGCTGAAAGAAGGAGCTACAGCTTTGGAGCTGGACACCATGAAGGCATTGGGGTTCTTGGCATTGGGTTGCTTAGAGGAACGCAGACAGAATAGGCCTTCGATGAAAGAAGTTGTGGAGGAGATTGAGTACATTACAAGCATTGCCACAGCAAAGGTCGACGACGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000139 GO:0000902 GO:0000904 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0005789 GO:0005794 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0006888 GO:0007275 GO:0008150 GO:0009506 GO:0009555 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016192 GO:0022414 GO:0030054 GO:0030154 GO:0031090 GO:0031984 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0046907 GO:0048193 GO:0048229 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051704 GO:0055044 GO:0060560 GO:0071840 GO:0071944 GO:0098588 GO:0098791 GO:0098827

KEGG Pathways

Metabolic & Signaling

ko05134 map05134

Pfam Domains

Protein Families

Ras

Protein Analysis

556

Amino Acids

61.54

Weight (kDa)

8.09

Isoelectric Point (pI)

36.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	272 - 542	7e-47	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	272 - 540	1e-42	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015808)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02130
fragaria_vesca	FvH4_7g26840
malus_domestica	MD01G1176600.v1.1 MD04G1050400.v1.1 MD07G1247800.v1.1
prunus_persica	Prupe.2G271800_v2.0.a1 Prupe.2G271800_v2.0.a1
pyrus_communis	pycom01g18730
rosa_chinensis	RchiOBHm_Chr1g0373531
rosa_laevigata	RLG00000026818
rosa_roxburghii	Rroxscaffold_4G00284170
rosa_rugosa	Rorug01G0377900 Rorug01G0378000
rosa_samantha	Rh1CG364400
rosa_wichuraiana	Rw1G034800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	146
AatII	GACGTC	1 cut(s)	1185
Acc16I	TGCGCA	1 cut(s)	453
Acc36I	ACCTGC	2 cut(s)	146, 599
AccB1I	GGYRCC	1 cut(s)	427
AccI	GTMKAC	3 cut(s)	843, 1359, 1659
AccII	CGCG	3 cut(s)	59, 168, 890
AclWI	GGATC	7 cut(s)	154, 365, 378, 480, 493, 1307, 1490
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	2 cut(s)	364, 939
AcyI	GRCGYC	3 cut(s)	35, 428, 1182
AfaI	GTAC	5 cut(s)	247, 448, 663, 1025, 1631
AfiI	CCNNNNNNNGG	8 cut(s)	31, 95, 140, 390, 404, 554, 555, 931
AflIII	ACRYGT	1 cut(s)	1283
AgeI	ACCGGT	1 cut(s)	390
AgsI	TTSAA	5 cut(s)	335, 585, 1219, 1281, 1417
AhdI	GACNNNNNGTC	3 cut(s)	472, 1101, 1186
AjiI	CACGTC	1 cut(s)	286
AjnI	CCWGG	1 cut(s)	301
AleI	CACNNNNGTG	1 cut(s)	872
Alw21I	GWGCWC	2 cut(s)	975, 1291
Alw26I	GTCTC	2 cut(s)	801, 1109
Alw44I	GTGCAC	1 cut(s)	971
AlwI	GGATC	7 cut(s)	154, 365, 378, 480, 493, 1307, 1490
AlwNI	CAGNNNCTG	1 cut(s)	1462
AoxI	GGCC	3 cut(s)	3, 395, 1595
ApaLI	GTGCAC	1 cut(s)	971
ApeKI	GCWGC	5 cut(s)	40, 43, 644, 752, 1003
ApoI	RAATTY	2 cut(s)	364, 939
AsiGI	ACCGGT	1 cut(s)	390
AspLEI	GCGC	6 cut(s)	59, 430, 454, 632, 675, 684
AspS9I	GGNCC	5 cut(s)	63, 396, 544, 934, 1423
AsuC2I	CCSGG	3 cut(s)	405, 494, 532
AsuHPI	GGTGA	5 cut(s)	155, 332, 757, 848, 1166
AvaII	GGWCC	4 cut(s)	63, 544, 934, 1423
BaeGI	GKGCMC	1 cut(s)	975
BamHI	GGATCC	2 cut(s)	370, 485
BanI	GGYRCC	1 cut(s)	427
BanII	GRGCYC	1 cut(s)	174
BauI	CACGAG	1 cut(s)	1090
BbsI	GAAGAC	1 cut(s)	754
Bbv12I	GWGCWC	2 cut(s)	975, 1291
BbvCI	CCTCAGC	1 cut(s)	1128
BbvI	GCAGC	5 cut(s)	27, 30, 656, 764, 1015
BccI	CCATC	4 cut(s)	225, 656, 857, 1459
BceAI	ACGGC	1 cut(s)	48
BcgI	CGANNNNNNTGC	2 cut(s)	927, 961
BciT130I	CCWGG	1 cut(s)	303
BciVI	GTATCC	1 cut(s)	1298
BcnI	CCSGG	3 cut(s)	405, 494, 532
BcoDI	GTCTC	2 cut(s)	801, 1109
BfaI	CTAG	1 cut(s)	1191
BfmI	CTRYAG	3 cut(s)	1360, 1407, 1518
BfoI	RGCGCY	2 cut(s)	431, 676
BfuAI	ACCTGC	2 cut(s)	146, 599
BfuI	GTATCC	1 cut(s)	1298
BisI	GCNGC	7 cut(s)	41, 44, 97, 166, 645, 753, 1004
BlsI	GCNGC	7 cut(s)	42, 45, 98, 167, 646, 754, 1005
Bme1390I	CCNGG	4 cut(s)	303, 405, 494, 532
Bme18I	GGWCC	4 cut(s)	63, 544, 934, 1423
BmeRI	GACNNNNNGTC	3 cut(s)	472, 1101, 1186
BmgBI	CACGTC	1 cut(s)	286
BmgT120I	GGNCC	5 cut(s)	63, 396, 544, 934, 1423
BmiI	GGNNCC	9 cut(s)	173, 372, 429, 438, 487, 545, 546, 1424, 1425
BmrFI	CCNGG	4 cut(s)	303, 405, 494, 532
BmsI	GCATC	3 cut(s)	641, 693, 1477
BpiI	GAAGAC	1 cut(s)	754
BplI	GAGNNNNNCTC	2 cut(s)	798, 830
BpmI	CTGGAG	2 cut(s)	239, 787
Bpu10I	CCTNAGC	2 cut(s)	1128, 1290
BpuEI	CTTGAG	2 cut(s)	681, 1067
BpuMI	CCSGG	3 cut(s)	405, 494, 532
BsaAI	YACGTR	1 cut(s)	540
BsaHI	GRCGYC	3 cut(s)	35, 428, 1182
BsaI	GGTCTC	1 cut(s)	801
BsaJI	CCNNGG	4 cut(s)	166, 302, 431, 1224
BsaWI	WCCGGW	3 cut(s)	373, 390, 767
Bsc4I	CCNNNNNNNGG	8 cut(s)	31, 95, 140, 390, 404, 554, 555, 931
Bse118I	RCCGGY	2 cut(s)	390, 439
Bse1I	ACTGG	2 cut(s)	148, 601
Bse3DI	GCAATG	2 cut(s)	651, 1641
BseBI	CCWGG	1 cut(s)	303
BseDI	CCNNGG	4 cut(s)	166, 302, 431, 1224
BseGI	GGATG	1 cut(s)	1492
BseLI	CCNNNNNNNGG	8 cut(s)	31, 95, 140, 390, 404, 554, 555, 931
BseMI	GCAATG	2 cut(s)	651, 1641
BseMII	CTCAG	4 cut(s)	136, 1119, 1167, 1304
BseNI	ACTGG	2 cut(s)	148, 601
BseRI	GAGGAG	4 cut(s)	168, 171, 803, 1634
BseSI	GKGCMC	1 cut(s)	975
BseXI	GCAGC	5 cut(s)	27, 30, 656, 764, 1015
BsgI	GTGCAG	1 cut(s)	1475
Bsh1236I	CGCG	3 cut(s)	59, 168, 890
Bsh1285I	CGRYCG	1 cut(s)	211
BshFI	GGCC	3 cut(s)	5, 397, 1597
BshNI	GGYRCC	1 cut(s)	427
BshTI	ACCGGT	1 cut(s)	390
BsiEI	CGRYCG	1 cut(s)	211
BsiHKAI	GWGCWC	2 cut(s)	975, 1291
BsiSI	CCGG	7 cut(s)	374, 391, 404, 440, 494, 531, 768
BsiWI	CGTACG	1 cut(s)	245
BslFI	GGGAC	4 cut(s)	95, 557, 1145, 1436
BslI	CCNNNNNNNGG	8 cut(s)	31, 95, 140, 390, 404, 554, 555, 931
BsmAI	GTCTC	2 cut(s)	801, 1109
BsmBI	CGTCTC	1 cut(s)	1109
BsmFI	GGGAC	4 cut(s)	95, 557, 1145, 1436
BsmI	GAATGC	1 cut(s)	1225
BsnI	GGCC	3 cut(s)	5, 397, 1597
Bso31I	GGTCTC	1 cut(s)	801
Bsp1286I	GDGCHC	3 cut(s)	174, 975, 1291
Bsp143I	GATC	7 cut(s)	159, 208, 370, 485, 885, 1312, 1495
Bsp68I	TCGCGA	1 cut(s)	890
BspANI	GGCC	3 cut(s)	5, 397, 1597
BspCNI	CTCAG	4 cut(s)	135, 1120, 1166, 1303
BspFNI	CGCG	3 cut(s)	59, 168, 890
BspHI	TCATGA	1 cut(s)	1117
BspLI	GGNNCC	9 cut(s)	173, 372, 429, 438, 487, 545, 546, 1424, 1425
BspMI	ACCTGC	2 cut(s)	146, 599
BspPI	GGATC	7 cut(s)	154, 365, 378, 480, 493, 1307, 1490
BspT107I	GGYRCC	1 cut(s)	427
BspTNI	GGTCTC	1 cut(s)	801
BsrDI	GCAATG	2 cut(s)	651, 1641
BsrFI	RCCGGY	2 cut(s)	390, 439
BsrI	ACTGG	2 cut(s)	148, 601
BssAI	RCCGGY	2 cut(s)	390, 439
BssECI	CCNNGG	4 cut(s)	166, 302, 431, 1224
BssMI	GATC	7 cut(s)	159, 208, 370, 485, 885, 1312, 1495
BssNI	GRCGYC	3 cut(s)	35, 428, 1182
BssSI	CACGAG	1 cut(s)	1090
BssT1I	CCWWGG	1 cut(s)	1224
Bst2BI	CACGAG	1 cut(s)	1090
Bst2UI	CCWGG	1 cut(s)	303
Bst4CI	ACNGT	4 cut(s)	109, 420, 871, 1178
Bst6I	CTCTTC	1 cut(s)	1467
BstACI	GRCGYC	3 cut(s)	35, 428, 1182
BstBAI	YACGTR	1 cut(s)	540
BstC8I	GCNNGC	1 cut(s)	170
BstDEI	CTNAG	6 cut(s)	122, 817, 1128, 1153, 1290, 1573
BstDSI	CCRYGG	1 cut(s)	166
BstEII	GGTNACC	1 cut(s)	143
BstENI	CCTNNNNNAGG	1 cut(s)	929
BstF5I	GGATG	1 cut(s)	1492
BstFNI	CGCG	3 cut(s)	59, 168, 890
BstH2I	RGCGCY	2 cut(s)	431, 676
BstHHI	GCGC	6 cut(s)	59, 430, 454, 632, 675, 684
BstKTI	GATC	7 cut(s)	162, 211, 373, 488, 888, 1315, 1498
BstMAI	GTCTC	2 cut(s)	801, 1109
BstMBI	GATC	7 cut(s)	159, 208, 370, 485, 885, 1312, 1495
BstMCI	CGRYCG	1 cut(s)	211
BstMWI	GCNNNNNNNGC	8 cut(s)	93, 256, 436, 653, 679, 681, 1229, 1384
BstNI	CCWGG	1 cut(s)	303
BstNSI	RCATGY	1 cut(s)	1287
BstPI	GGTNACC	1 cut(s)	143
BstSCI	CCNGG	4 cut(s)	301, 403, 492, 530
BstSFI	CTRYAG	3 cut(s)	1360, 1407, 1518
BstSLI	GKGCMC	1 cut(s)	975
BstUI	CGCG	3 cut(s)	59, 168, 890
BstV1I	GCAGC	5 cut(s)	27, 30, 656, 764, 1015
BstV2I	GAAGAC	1 cut(s)	754
BstX2I	RGATCY	3 cut(s)	159, 370, 485
BstYI	RGATCY	3 cut(s)	159, 370, 485
BsuI	GTATCC	1 cut(s)	1298
BsuRI	GGCC	3 cut(s)	5, 397, 1597
BtgI	CCRYGG	1 cut(s)	166
BtrI	CACGTC	1 cut(s)	286
BtsCI	GGATG	1 cut(s)	1492
BtsI	GCAGTG	1 cut(s)	1122
BtsIMutI	CAGTG	4 cut(s)	425, 867, 912, 1122
BtuMI	TCGCGA	1 cut(s)	890
BveI	ACCTGC	2 cut(s)	146, 599
Cac8I	GCNNGC	1 cut(s)	170
CaiI	CAGNNNCTG	1 cut(s)	1462
CciI	TCATGA	1 cut(s)	1117
CfoI	GCGC	6 cut(s)	59, 430, 454, 632, 675, 684
Cfr10I	RCCGGY	2 cut(s)	390, 439
Cfr13I	GGNCC	5 cut(s)	63, 396, 544, 934, 1423
Cfr42I	CCGCGG	1 cut(s)	169
CseI	GACGC	2 cut(s)	24, 269
Csp6I	GTAC	5 cut(s)	246, 447, 662, 1024, 1630
CspAI	ACCGGT	1 cut(s)	390
CviAII	CATG	3 cut(s)	1118, 1284, 1540
CviQI	GTAC	5 cut(s)	246, 447, 662, 1024, 1630
DdeI	CTNAG	6 cut(s)	122, 817, 1128, 1153, 1290, 1573
DinI	GGCGCC	1 cut(s)	429
DpnI	GATC	7 cut(s)	161, 210, 372, 487, 887, 1314, 1497
DpnII	GATC	7 cut(s)	159, 208, 370, 485, 885, 1312, 1495
DriI	GACNNNNNGTC	3 cut(s)	472, 1101, 1186
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	1467
Eam1105I	GACNNNNNGTC	3 cut(s)	472, 1101, 1186
EarI	CTCTTC	1 cut(s)	1467
EciI	GGCGGA	4 cut(s)	11, 152, 218, 1484
Eco130I	CCWWGG	1 cut(s)	1224
Eco147I	AGGCCT	1 cut(s)	1597
Eco24I	GRGCYC	1 cut(s)	174
Eco31I	GGTCTC	1 cut(s)	801
Eco32I	GATATC	1 cut(s)	293
Eco47I	GGWCC	4 cut(s)	63, 544, 934, 1423
Eco91I	GGTNACC	1 cut(s)	143
EcoNI	CCTNNNNNAGG	1 cut(s)	929
EcoO109I	RGGNCCY	2 cut(s)	544, 1423
EcoO65I	GGTNACC	1 cut(s)	143
EcoRI	GAATTC	1 cut(s)	939
EcoRII	CCWGG	1 cut(s)	301
EcoRV	GATATC	1 cut(s)	293
EcoT14I	CCWWGG	1 cut(s)	1224
EcoT38I	GRGCYC	1 cut(s)	174
EgeI	GGCGCC	1 cut(s)	429
EheI	GGCGCC	1 cut(s)	429
ErhI	CCWWGG	1 cut(s)	1224
Esp3I	CGTCTC	1 cut(s)	1109
FaeI	CATG	3 cut(s)	1121, 1287, 1543
FaqI	GGGAC	4 cut(s)	95, 557, 1145, 1436
FatI	CATG	3 cut(s)	1117, 1283, 1539
FauI	CCCGC	1 cut(s)	161
FblI	GTMKAC	3 cut(s)	843, 1359, 1659
Fnu4HI	GCNGC	7 cut(s)	41, 44, 97, 166, 645, 753, 1004
FokI	GGATG	1 cut(s)	1499
FriOI	GRGCYC	1 cut(s)	174
Fsp4HI	GCNGC	7 cut(s)	41, 44, 97, 166, 645, 753, 1004
FspBI	CTAG	1 cut(s)	1191
FspI	TGCGCA	1 cut(s)	453
GlaI	GCGC	6 cut(s)	58, 429, 453, 631, 674, 683
GluI	GCNGC	7 cut(s)	41, 44, 97, 166, 645, 753, 1004
GsuI	CTGGAG	2 cut(s)	239, 787
HaeII	RGCGCY	2 cut(s)	431, 676
HaeIII	GGCC	3 cut(s)	5, 397, 1597
HapII	CCGG	7 cut(s)	374, 391, 404, 440, 494, 531, 768
HgaI	GACGC	2 cut(s)	24, 269
HhaI	GCGC	6 cut(s)	59, 430, 454, 632, 675, 684
Hin1I	GRCGYC	3 cut(s)	35, 428, 1182
Hin1II	CATG	3 cut(s)	1121, 1287, 1543
Hin6I	GCGC	6 cut(s)	57, 428, 452, 630, 673, 682
HinP1I	GCGC	6 cut(s)	57, 428, 452, 630, 673, 682
HincII	GTYRAC	2 cut(s)	955, 1660
HindII	GTYRAC	2 cut(s)	955, 1660
HinfI	GANTC	6 cut(s)	238, 307, 321, 964, 1096, 1270
HpaI	GTTAAC	1 cut(s)	955
HpaII	CCGG	7 cut(s)	374, 391, 404, 440, 494, 531, 768
HphI	GGTGA	5 cut(s)	155, 332, 757, 848, 1166
Hpy188I	TCNGA	5 cut(s)	290, 460, 490, 501, 938
Hpy188III	TCNNGA	7 cut(s)	698, 804, 889, 1118, 1205, 1248, 1316
Hpy99I	CGWCG	5 cut(s)	40, 246, 290, 1664, 1667
HpyAV	CCTTC	4 cut(s)	341, 1505, 1537, 1608
HpyCH4III	ACNGT	4 cut(s)	109, 420, 871, 1178
HpyCH4IV	ACGT	5 cut(s)	285, 337, 539, 1102, 1182
HpyCH4V	TGCA	4 cut(s)	644, 973, 1445, 1456
HpyF10VI	GCNNNNNNNGC	8 cut(s)	93, 256, 436, 653, 679, 681, 1229, 1384
HpyF3I	CTNAG	6 cut(s)	122, 817, 1128, 1153, 1290, 1573
HpySE526I	ACGT	5 cut(s)	285, 337, 539, 1102, 1182
Hsp92I	GRCGYC	3 cut(s)	35, 428, 1182
Hsp92II	CATG	3 cut(s)	1121, 1287, 1543
HspAI	GCGC	6 cut(s)	57, 428, 452, 630, 673, 682
KasI	GGCGCC	1 cut(s)	427
KflI	GGGWCCC	2 cut(s)	544, 1423
KspAI	GTTAAC	1 cut(s)	955
KspI	CCGCGG	1 cut(s)	169
Kzo9I	GATC	7 cut(s)	159, 208, 370, 485, 885, 1312, 1495
LmnI	GCTCC	6 cut(s)	51, 177, 436, 1384, 1514, 1528
Lsp1109I	GCAGC	5 cut(s)	27, 30, 656, 764, 1015
LweI	GCATC	3 cut(s)	641, 693, 1477
MaeI	CTAG	1 cut(s)	1191
MaeII	ACGT	5 cut(s)	285, 337, 539, 1102, 1182
MaeIII	GTNAC	9 cut(s)	7, 143, 281, 338, 464, 524, 1178, 1193, 1271
MalI	GATC	7 cut(s)	161, 210, 372, 487, 887, 1314, 1497
MboI	GATC	7 cut(s)	159, 208, 370, 485, 885, 1312, 1495
MboII	GAAGA	6 cut(s)	754, 872, 895, 904, 1193, 1484
MfeI	CAATTG	1 cut(s)	1337
MflI	RGATCY	3 cut(s)	159, 370, 485
MhlI	GDGCHC	3 cut(s)	174, 975, 1291
MluCI	AATT	7 cut(s)	364, 939, 1110, 1167, 1214, 1330, 1337
Mly113I	GGCGCC	1 cut(s)	428
MlyI	GAGTC	5 cut(s)	232, 315, 973, 1090, 1279
MmeI	TCCRAC	5 cut(s)	268, 295, 438, 513, 1362
MseI	TTAA	4 cut(s)	29, 780, 954, 1481
MslI	CAYNNNNRTG	1 cut(s)	872
MspA1I	CMGCKG	2 cut(s)	168, 1157
MspI	CCGG	7 cut(s)	374, 391, 404, 440, 494, 531, 768
MspR9I	CCNGG	4 cut(s)	303, 405, 494, 532
MunI	CAATTG	1 cut(s)	1337
Mva1269I	GAATGC	1 cut(s)	1225
MvaI	CCWGG	1 cut(s)	303
MvnI	CGCG	3 cut(s)	59, 168, 890
MwoI	GCNNNNNNNGC	8 cut(s)	93, 256, 436, 653, 679, 681, 1229, 1384
NarI	GGCGCC	1 cut(s)	428
NciI	CCSGG	3 cut(s)	405, 494, 532
NdeII	GATC	7 cut(s)	159, 208, 370, 485, 885, 1312, 1495
NlaIII	CATG	3 cut(s)	1121, 1287, 1543
NlaIV	GGNNCC	9 cut(s)	173, 372, 429, 438, 487, 545, 546, 1424, 1425
NmeAIII	GCCGAG	1 cut(s)	456
NmuCI	GTSAC	6 cut(s)	143, 281, 338, 464, 1178, 1271
NruI	TCGCGA	1 cut(s)	890
NsbI	TGCGCA	1 cut(s)	453
NspI	RCATGY	1 cut(s)	1287
OliI	CACNNNNGTG	1 cut(s)	872
PagI	TCATGA	1 cut(s)	1117
PaqCI	CACCTGC	1 cut(s)	146
PceI	AGGCCT	1 cut(s)	1597
PciI	ACATGT	1 cut(s)	1283
PctI	GAATGC	1 cut(s)	1225
PfeI	GAWTC	1 cut(s)	307
Pfl23II	CGTACG	1 cut(s)	245
PflFI	GACNNNGTC	1 cut(s)	920
PinAI	ACCGGT	1 cut(s)	390
PkrI	GCNGC	7 cut(s)	42, 45, 98, 167, 646, 754, 1005
Ple19I	CGATCG	1 cut(s)	211
PleI	GAGTC	5 cut(s)	232, 315, 972, 1090, 1278
PluTI	GGCGCC	1 cut(s)	431
PpsI	GAGTC	5 cut(s)	232, 315, 972, 1090, 1278
Ppu21I	YACGTR	1 cut(s)	540
PpuMI	RGGWCCY	2 cut(s)	544, 1423
PscI	ACATGT	1 cut(s)	1283
Psp5II	RGGWCCY	2 cut(s)	544, 1423
Psp6I	CCWGG	1 cut(s)	301
PspEI	GGTNACC	1 cut(s)	143
PspGI	CCWGG	1 cut(s)	301
PspLI	CGTACG	1 cut(s)	245
PspN4I	GGNNCC	9 cut(s)	173, 372, 429, 438, 487, 545, 546, 1424, 1425
PspPI	GGNCC	5 cut(s)	63, 396, 544, 934, 1423
PspPPI	RGGWCCY	2 cut(s)	544, 1423
PstNI	CAGNNNCTG	1 cut(s)	1462
PsuI	RGATCY	3 cut(s)	159, 370, 485
PsyI	GACNNNGTC	1 cut(s)	920
PvuI	CGATCG	1 cut(s)	211
PvuII	CAGCTG	1 cut(s)	1157
RruI	TCGCGA	1 cut(s)	890
RsaI	GTAC	5 cut(s)	247, 448, 663, 1025, 1631
RsaNI	GTAC	5 cut(s)	246, 447, 662, 1024, 1630
RseI	CAYNNNNRTG	1 cut(s)	872
SacII	CCGCGG	1 cut(s)	169
SalI	GTCGAC	1 cut(s)	1658
SaqAI	TTAA	4 cut(s)	29, 780, 954, 1481
SatI	GCNGC	7 cut(s)	41, 44, 97, 166, 645, 753, 1004
Sau3AI	GATC	7 cut(s)	159, 208, 370, 485, 885, 1312, 1495
Sau96I	GGNCC	5 cut(s)	63, 396, 544, 934, 1423
SchI	GAGTC	5 cut(s)	232, 315, 973, 1090, 1279
ScrFI	CCNGG	4 cut(s)	303, 405, 494, 532
SduI	GDGCHC	3 cut(s)	174, 975, 1291
SfaNI	GCATC	3 cut(s)	641, 693, 1477
SfcI	CTRYAG	3 cut(s)	1360, 1407, 1518
SfoI	GGCGCC	1 cut(s)	429
Sfr303I	CCGCGG	1 cut(s)	169
SgrBI	CCGCGG	1 cut(s)	169
SinI	GGWCC	4 cut(s)	63, 544, 934, 1423
SmiMI	CAYNNNNRTG	1 cut(s)	872
SmlI	CTYRAG	2 cut(s)	696, 1046
SmoI	CTYRAG	2 cut(s)	696, 1046
Sse9I	AATT	7 cut(s)	364, 939, 1110, 1167, 1214, 1330, 1337
SseBI	AGGCCT	1 cut(s)	1597
SspDI	GGCGCC	1 cut(s)	427
SspI	AATATT	1 cut(s)	1322
SspMI	CTAG	1 cut(s)	1191
StuI	AGGCCT	1 cut(s)	1597
StyD4I	CCNGG	4 cut(s)	301, 403, 492, 530
StyI	CCWWGG	1 cut(s)	1224
TaaI	ACNGT	4 cut(s)	109, 420, 871, 1178
TaiI	ACGT	5 cut(s)	288, 340, 542, 1105, 1185
TaqI	TCGA	6 cut(s)	184, 858, 1063, 1078, 1601, 1659
TasI	AATT	7 cut(s)	364, 939, 1110, 1167, 1214, 1330, 1337
TatI	WGTACW	4 cut(s)	446, 661, 1023, 1629
TauI	GCSGC	2 cut(s)	99, 168
TfiI	GAWTC	1 cut(s)	307
Tru1I	TTAA	4 cut(s)	29, 780, 954, 1481
Tru9I	TTAA	4 cut(s)	29, 780, 954, 1481
TscAI	CASTG	4 cut(s)	425, 874, 919, 1129
TseFI	GTSAC	6 cut(s)	143, 281, 338, 464, 1178, 1271
TseI	GCWGC	5 cut(s)	40, 43, 644, 752, 1003
Tsp45I	GTSAC	6 cut(s)	143, 281, 338, 464, 1178, 1271
TspDTI	ATGAA	2 cut(s)	1556, 1619
TspGWI	ACGGA	1 cut(s)	64
TspRI	CASTG	4 cut(s)	425, 874, 919, 1129
Tth111I	GACNNNGTC	1 cut(s)	920
VneI	GTGCAC	1 cut(s)	971
VpaK11BI	GGWCC	4 cut(s)	63, 544, 934, 1423
XagI	CCTNNNNNAGG	1 cut(s)	929
XapI	RAATTY	2 cut(s)	364, 939
XceI	RCATGY	1 cut(s)	1287
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1546
XmiI	GTMKAC	3 cut(s)	843, 1359, 1659
XspI	CTAG	1 cut(s)	1191
ZraI	GACGTC	1 cut(s)	1183

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.