Rorug01G0466700

Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0016719
Physical Location & Seq
Reverse (-)
55906285 .. 55947796
41512 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0466700.1

Sequence Viewer

Length: 1947 bp
ATGTCTAACTGTAAGGTACCCTGCTACGATGAGAGCATCATCGAAATGAGCTCTACACCAGGAATTGGTTATGATTTCAACTGTCCTGAGGCTCTATGGCAACATCCAATACGGAAACGTGAACCTGAAGAAATTCAAGCAAGCAACAAAGGGAAAAGGCCAACAGTTGCGAAAGTTCTTTCAGTTTTGAACCCCTGGTGGAATGCGATACTATTAACTTCATGTGTGATTGCAGTTTTATTTGATCCTTTGTTCTTTTACATTCCATACATCAATGAGAAAGAAAAGTGCATGGGAATCGATAAACAAGTGCGGACTGCAGCTCTGGTTTTCCGATCAGTCACGGACATCACTTTCCTAGTGCATATCATATACCAACTTCGTGAAGCTATCAAATTTGCAGCCTCAAAGGTTCCAAGGGATACAAATTCAAAAAATTGGGAATGGGAATCGGTATCCCTAGCTCAGATGATTAAGTTTGCGAAGGAATTTTCTCGCAAATTGTCATGGCGCTCTTTCCTAACTGATGTTTTCGCTATTTTCCCCATGCCACAACTGCTAATACTAGGGTTCTTTTTCGAAATGGGAGGCAGTAACTATTTGGAGAGAAGAAAGATTCTGAGTGGTTTTGTTCTAATCCAATATGTGCCAAGAATTTATCGAATTTATCTATCGTATACTGCGGTTACACATTCCGCATTATGGGTTAAAGGTGCATTCAATTTTTTTCTCTACATCCTTGCCAGTCATGTACTGGGAGCTTTTTGGTACTTTTTTTCTATTTTTCGAGAGACATCATGTTGGTATCGAAGTTGCATTGATGCAAATCCAAGATCAAGATGCACTTTTTATTGCCATGACAGAACTCCAATTGTAACCGAAGGATTCAATAAAACTACTCTAGGAGATCTTTGCCTTTTAAAAGTTCCATATAATATGACTGAACCACCATTTGATTTCGGAATATTTTTTGATGCCCTCAAAAATGATATCCTGGGGCCAATAAATTTTCCAACAAAGATTGGTTTCTGCTTTTGGTGGGGCTTGCGAAATTTAAGTTCTTTTGGCACAAGTTTGGAAACAAGTACCTATCTGTGGGAAAACAGCTTTGCAATTCTTATTTCTATCATCGGCTTGCTATTGTTTCTATATCTCATTGGAAATGTTCAGTTATATATGGCGAGGGCAATTACAAGAGCGGAAGAGGTAAGAGAGAAAATTCAGACCAAAAAGAACGATATAGAAAAGTGGATGGAAAATAATGACCTCCAAGATGACATGAAGGAAGAGATCATGAAAAACATCAAGAAAAAATTGGAAGAGGACATAAATGCAGATCTGGAGAATCTATTCTCTGTTCTTCCCTGGTATACCAAGAAAGCTCTAAAGCGCGTTCTTTGCATGAGTGCGCTAAGAAAAGCACCAATGCTTAGCCAGATGGATGAAAAAGTTTTGAAAATGATGTGCGACTATCTGAAGCCGGTGAATTACCCAGAGAATACCCTGGTTTTTCAGATGGGAGAACCACTTGATCGAATGGTATTCATTACAGAAGGGTTTATGTGGACTTACATGACTGCTACTGAGAGTAGTCATTTTGGAAAAGCAACAGGACTGGCTACTTCTCCATCCATGGACACCAACTTCCTCAAGAAGGGTGATTCTTATGGACACGCTCTTCTGCAGTTTGCATCATCATCTCTTGTGGCACTCCCTACCTCAGCTGCAAATGTCCGGTGTCACACAAAGGTAGAGGCGTTCGTTCTCATGGCCAAGGACTTGAAAAACATAGTAACTAAATGCGAAAATTTTTGGCCTTTCGACTACAATGCTTCTAAAGATGAGGCGGTGGATCAGGTCACACCCCTGGGGCAGTTTCAGCAACAACAAATGCCAAAGAAGCGTGTATCAACATCGATCATCAACCCCACCGGCTATAGTGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cullin_binding

Protein Analysis

648

Amino Acids

74.68

Weight (kDa)

8.6

Isoelectric Point (pI)

42.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016719)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g01430 FvH4_1g01430
malus_domestica MD15G1157200.v1.1
prunus_persica Prupe.7G258300_v2.0.a1 Prupe.7G258300_v2.0.a1
pyrus_communis pycom15g14100
rosa_chinensis RchiOBHm_Chr2g0086341
rosa_laevigata RLG00000015751
rosa_multiflora Rmu_sc0003572.1_g000003 Rmu_sc0004510.1_g000020
rosa_roxburghii Rroxscaffold_2G00154680
rosa_rugosa Rorug01G0466700
rosa_samantha Rh2AG016900
rosa_wichuraiana Rw2G001430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 16
AccB1I GGYRCC 1 cut(s) 16
AccB7I CCANNNNNTGG 1 cut(s) 65
AccBSI CCGCTC 1 cut(s) 1199
AccI GTMKAC 2 cut(s) 677, 1370
AccII CGCG 1 cut(s) 1392
AciI CCGC 5 cut(s) 313, 683, 696, 1199, 1847
AclWI GGATC 2 cut(s) 239, 1860
AcoI YGGCCR 1 cut(s) 1770
AcuI CTGAAG 2 cut(s) 147, 1496
AfaI GTAC 4 cut(s) 18, 753, 770, 1087
AfiI CCNNNNNNNGG 4 cut(s) 65, 702, 1095, 1654
AgsI TTSAA 8 cut(s) 79, 137, 190, 432, 721, 889, 1456, 1783
AjnI CCWGG 6 cut(s) 58, 194, 993, 1364, 1503, 1866
AluBI AGCT 8 cut(s) 51, 323, 389, 464, 761, 1107, 1382, 1724
AluI AGCT 8 cut(s) 51, 323, 389, 464, 761, 1107, 1382, 1724
Alw21I GWGCWC 1 cut(s) 53
Alw26I GTCTC 1 cut(s) 785
AlwI GGATC 2 cut(s) 239, 1860
AoxI GGCC 4 cut(s) 158, 998, 1770, 1814
ApeKI GCWGC 3 cut(s) 320, 401, 1724
Asp700I GAANNNNTTC 2 cut(s) 132, 1349
Asp718I GGTACC 1 cut(s) 16
AspLEI GCGC 3 cut(s) 513, 1392, 1411
AspS9I GGNCC 1 cut(s) 998
AsuHPI GGTGA 2 cut(s) 1495, 1670
AsuII TTCGAA 1 cut(s) 579
AxyI CCTNAGG 1 cut(s) 87
BalI TGGCCA 1 cut(s) 1772
BanI GGYRCC 1 cut(s) 16
BanII GRGCYC 1 cut(s) 53
Bbv12I GWGCWC 1 cut(s) 53
BbvCI CCTCAGC 1 cut(s) 1720
BbvI GCAGC 3 cut(s) 332, 413, 1711
BccI CCATC 4 cut(s) 1246, 1432, 1510, 1636
BcgI CGANNNNNNTGC 4 cut(s) 280, 314, 1811, 1845
BciT130I CCWGG 6 cut(s) 60, 196, 995, 1366, 1505, 1868
BciVI GTATCC 2 cut(s) 415, 466
BcoDI GTCTC 1 cut(s) 785
BfaI CTAG 4 cut(s) 359, 461, 566, 902
BfmI CTRYAG 3 cut(s) 318, 1682, 1936
BfoI RGCGCY 1 cut(s) 514
BfuI GTATCC 2 cut(s) 415, 466
BglII AGATCT 2 cut(s) 907, 1336
BisI GCNGC 3 cut(s) 321, 402, 1725
BlpI GCTNAGC 1 cut(s) 1430
BlsI GCNGC 3 cut(s) 322, 403, 1726
Bme1390I CCNGG 6 cut(s) 60, 196, 995, 1366, 1505, 1868
BmgT120I GGNCC 1 cut(s) 998
BmiI GGNNCC 3 cut(s) 18, 414, 999
BmrFI CCNGG 6 cut(s) 60, 196, 995, 1366, 1505, 1868
BmrI ACTGGG 1 cut(s) 764
BmsI GCATC 5 cut(s) 45, 811, 830, 964, 1700
BmuI ACTGGG 1 cut(s) 764
BpmI CTGGAG 1 cut(s) 1361
Bpu10I CCTNAGC 1 cut(s) 1720
Bpu1102I GCTNAGC 1 cut(s) 1430
Bpu14I TTCGAA 1 cut(s) 579
BpuEI CTTGAG 1 cut(s) 1634
Bsa29I ATCGAT 2 cut(s) 300, 1916
BsaBI GATNNNNATC 1 cut(s) 825
BsaJI CCNNGG 9 cut(s) 194, 416, 994, 1364, 1503, 1632, 1773, 1866, 1867
BsaWI WCCGGW 1 cut(s) 1734
Bsc4I CCNNNNNNNGG 4 cut(s) 65, 702, 1095, 1654
Bse118I RCCGGY 2 cut(s) 1480, 1931
Bse1I ACTGG 3 cut(s) 744, 759, 1620
Bse21I CCTNAGG 1 cut(s) 87
Bse8I GATNNNNATC 1 cut(s) 825
BseBI CCWGG 6 cut(s) 60, 196, 995, 1366, 1505, 1868
BseCI ATCGAT 2 cut(s) 300, 1916
BseDI CCNNGG 9 cut(s) 194, 416, 994, 1364, 1503, 1632, 1773, 1866, 1867
BseGI GGATG 5 cut(s) 103, 735, 1257, 1447, 1628
BseJI GATNNNNATC 1 cut(s) 825
BseLI CCNNNNNNNGG 4 cut(s) 65, 702, 1095, 1654
BseMII CTCAG 5 cut(s) 78, 479, 611, 1575, 1734
BseNI ACTGG 3 cut(s) 744, 759, 1620
BseXI GCAGC 3 cut(s) 332, 413, 1711
Bsh1236I CGCG 1 cut(s) 1392
BshFI GGCC 4 cut(s) 160, 1000, 1772, 1816
BshNI GGYRCC 1 cut(s) 16
BshVI ATCGAT 2 cut(s) 300, 1916
BsiHKAI GWGCWC 1 cut(s) 53
BsiSI CCGG 3 cut(s) 1481, 1735, 1932
BslI CCNNNNNNNGG 4 cut(s) 65, 702, 1095, 1654
BsmAI GTCTC 1 cut(s) 785
BsmI GAATGC 2 cut(s) 208, 716
BsnI GGCC 4 cut(s) 160, 1000, 1772, 1816
Bsp119I TTCGAA 1 cut(s) 579
Bsp1286I GDGCHC 1 cut(s) 53
Bsp143I GATC 9 cut(s) 244, 335, 833, 907, 1290, 1336, 1531, 1852, 1917
Bsp1720I GCTNAGC 1 cut(s) 1430
Bsp19I CCATGG 1 cut(s) 1632
BspACI CCGC 5 cut(s) 313, 683, 696, 1199, 1847
BspANI GGCC 4 cut(s) 160, 1000, 1772, 1816
BspCNI CTCAG 5 cut(s) 79, 478, 612, 1576, 1733
BspDI ATCGAT 2 cut(s) 300, 1916
BspFNI CGCG 1 cut(s) 1392
BspHI TCATGA 1 cut(s) 1293
BspLI GGNNCC 3 cut(s) 18, 414, 999
BspMAI CTGCAG 2 cut(s) 322, 1686
BspPI GGATC 2 cut(s) 239, 1860
BspQI GCTCTTC 1 cut(s) 1683
BspT104I TTCGAA 1 cut(s) 579
BspT107I GGYRCC 1 cut(s) 16
BsrBI CCGCTC 1 cut(s) 1199
BsrFI RCCGGY 2 cut(s) 1480, 1931
BsrI ACTGG 3 cut(s) 744, 759, 1620
BssAI RCCGGY 2 cut(s) 1480, 1931
BssECI CCNNGG 9 cut(s) 194, 416, 994, 1364, 1503, 1632, 1773, 1866, 1867
BssMI GATC 9 cut(s) 244, 335, 833, 907, 1290, 1336, 1531, 1852, 1917
BssNAI GTATAC 2 cut(s) 678, 1371
BssT1I CCWWGG 3 cut(s) 416, 1632, 1773
Bst1107I GTATAC 2 cut(s) 678, 1371
Bst2UI CCWGG 6 cut(s) 60, 196, 995, 1366, 1505, 1868
Bst4CI ACNGT 3 cut(s) 11, 83, 166
Bst6I CTCTTC 4 cut(s) 1197, 1281, 1314, 1683
BstBI TTCGAA 1 cut(s) 579
BstC8I GCNNGC 3 cut(s) 142, 1046, 1136
BstDEI CTNAG 7 cut(s) 87, 465, 620, 1412, 1430, 1584, 1720
BstDSI CCRYGG 1 cut(s) 1632
BstENI CCTNNNNNAGG 1 cut(s) 1652
BstF5I GGATG 5 cut(s) 103, 735, 1257, 1447, 1628
BstFNI CGCG 1 cut(s) 1392
BstH2I RGCGCY 1 cut(s) 514
BstHHI GCGC 3 cut(s) 513, 1392, 1411
BstKTI GATC 9 cut(s) 247, 338, 836, 910, 1293, 1339, 1534, 1855, 1920
BstMAI GTCTC 1 cut(s) 785
BstMBI GATC 9 cut(s) 244, 335, 833, 907, 1290, 1336, 1531, 1852, 1917
BstMWI GCNNNNNNNGC 4 cut(s) 556, 1398, 1879, 1900
BstNI CCWGG 6 cut(s) 60, 196, 995, 1366, 1505, 1868
BstSCI CCNGG 6 cut(s) 58, 194, 993, 1364, 1503, 1866
BstSFI CTRYAG 3 cut(s) 318, 1682, 1936
BstUI CGCG 1 cut(s) 1392
BstV1I GCAGC 3 cut(s) 332, 413, 1711
BstX2I RGATCY 2 cut(s) 907, 1336
BstYI RGATCY 2 cut(s) 907, 1336
BstZ17I GTATAC 2 cut(s) 678, 1371
Bsu15I ATCGAT 2 cut(s) 300, 1916
Bsu36I CCTNAGG 1 cut(s) 87
BsuI GTATCC 2 cut(s) 415, 466
BsuRI GGCC 4 cut(s) 160, 1000, 1772, 1816
BsuTUI ATCGAT 2 cut(s) 300, 1916
BtgI CCRYGG 1 cut(s) 1632
BtsCI GGATG 5 cut(s) 103, 735, 1257, 1447, 1628
Cac8I GCNNGC 3 cut(s) 142, 1046, 1136
CciI TCATGA 1 cut(s) 1293
CfoI GCGC 3 cut(s) 513, 1392, 1411
Cfr10I RCCGGY 2 cut(s) 1480, 1931
Cfr13I GGNCC 1 cut(s) 998
ClaI ATCGAT 2 cut(s) 300, 1916
Csp6I GTAC 4 cut(s) 17, 752, 769, 1086
CviQI GTAC 4 cut(s) 17, 752, 769, 1086
DdeI CTNAG 7 cut(s) 87, 465, 620, 1412, 1430, 1584, 1720
DpnI GATC 9 cut(s) 246, 337, 835, 909, 1292, 1338, 1533, 1854, 1919
DpnII GATC 9 cut(s) 244, 335, 833, 907, 1290, 1336, 1531, 1852, 1917
DraI TTTAAA 1 cut(s) 921
EaeI YGGCCR 1 cut(s) 1770
Eam1104I CTCTTC 4 cut(s) 1197, 1281, 1314, 1683
EarI CTCTTC 4 cut(s) 1197, 1281, 1314, 1683
Ecl136II GAGCTC 1 cut(s) 51
Eco130I CCWWGG 3 cut(s) 416, 1632, 1773
Eco24I GRGCYC 1 cut(s) 53
Eco32I GATATC 1 cut(s) 991
Eco53kI GAGCTC 1 cut(s) 51
Eco57I CTGAAG 2 cut(s) 147, 1496
Eco81I CCTNAGG 1 cut(s) 87
EcoICRI GAGCTC 1 cut(s) 51
EcoNI CCTNNNNNAGG 1 cut(s) 1652
EcoRII CCWGG 6 cut(s) 58, 194, 993, 1364, 1503, 1866
EcoRV GATATC 1 cut(s) 991
EcoT14I CCWWGG 3 cut(s) 416, 1632, 1773
EcoT38I GRGCYC 1 cut(s) 53
ErhI CCWWGG 3 cut(s) 416, 1632, 1773
FalI AAGNNNNNCTT 2 cut(s) 829, 861
FblI GTMKAC 2 cut(s) 677, 1370
Fnu4HI GCNGC 3 cut(s) 321, 402, 1725
FokI GGATG 5 cut(s) 90, 722, 1264, 1454, 1615
FriOI GRGCYC 1 cut(s) 53
Fsp4HI GCNGC 3 cut(s) 321, 402, 1725
FspBI CTAG 4 cut(s) 359, 461, 566, 902
GlaI GCGC 3 cut(s) 512, 1391, 1410
GluI GCNGC 3 cut(s) 321, 402, 1725
GsuI CTGGAG 1 cut(s) 1361
HaeII RGCGCY 1 cut(s) 514
HaeIII GGCC 4 cut(s) 160, 1000, 1772, 1816
HapII CCGG 3 cut(s) 1481, 1735, 1932
HhaI GCGC 3 cut(s) 513, 1392, 1411
Hin6I GCGC 3 cut(s) 511, 1390, 1409
HinP1I GCGC 3 cut(s) 511, 1390, 1409
HinfI GANTC 6 cut(s) 297, 449, 616, 885, 1345, 1661
HpaII CCGG 3 cut(s) 1481, 1735, 1932
HphI GGTGA 2 cut(s) 1495, 1670
Hpy166II GTNNAC 4 cut(s) 122, 678, 1371, 1566
Hpy188I TCNGA 7 cut(s) 335, 468, 621, 962, 1224, 1476, 1515
Hpy188III TCNNGA 8 cut(s) 86, 383, 788, 837, 1294, 1306, 1340, 1651
Hpy8I GTNNAC 4 cut(s) 122, 678, 1371, 1566
HpyAV CCTTC 5 cut(s) 478, 875, 1276, 1547, 1648
HpyCH4III ACNGT 3 cut(s) 11, 83, 166
HpyCH4IV ACGT 1 cut(s) 118
HpyF10VI GCNNNNNNNGC 4 cut(s) 556, 1398, 1879, 1900
HpyF3I CTNAG 7 cut(s) 87, 465, 620, 1412, 1430, 1584, 1720
HpySE526I ACGT 1 cut(s) 118
HspAI GCGC 3 cut(s) 511, 1390, 1409
KpnI GGTACC 1 cut(s) 20
Kzo9I GATC 9 cut(s) 244, 335, 833, 907, 1290, 1336, 1531, 1852, 1917
LguI GCTCTTC 1 cut(s) 1683
LmnI GCTCC 1 cut(s) 758
Lsp1109I GCAGC 3 cut(s) 332, 413, 1711
LweI GCATC 5 cut(s) 45, 811, 830, 964, 1700
MaeI CTAG 4 cut(s) 359, 461, 566, 902
MaeII ACGT 1 cut(s) 118
MaeIII GTNAC 7 cut(s) 340, 593, 685, 874, 1739, 1792, 1858
MalI GATC 9 cut(s) 246, 337, 835, 909, 1292, 1338, 1533, 1854, 1919
MbiI CCGCTC 1 cut(s) 1199
MboI GATC 9 cut(s) 244, 335, 833, 907, 1290, 1336, 1531, 1852, 1917
MboII GAAGA 7 cut(s) 140, 621, 1214, 1298, 1331, 1352, 1670
MfeI CAATTG 1 cut(s) 870
MflI RGATCY 2 cut(s) 907, 1336
MhlI GDGCHC 1 cut(s) 53
MlsI TGGCCA 1 cut(s) 1772
MluNI TGGCCA 1 cut(s) 1772
MmeI TCCRAC 1 cut(s) 1037
Mox20I TGGCCA 1 cut(s) 1772
MroXI GAANNNNTTC 2 cut(s) 132, 1349
MscI TGGCCA 1 cut(s) 1772
MseI TTAA 5 cut(s) 215, 474, 708, 920, 1055
MslI CAYNNNNRTG 1 cut(s) 44
Msp20I TGGCCA 1 cut(s) 1772
MspA1I CMGCKG 1 cut(s) 1724
MspI CCGG 3 cut(s) 1481, 1735, 1932
MspR9I CCNGG 6 cut(s) 60, 196, 995, 1366, 1505, 1868
MunI CAATTG 1 cut(s) 870
Mva1269I GAATGC 2 cut(s) 208, 716
MvaI CCWGG 6 cut(s) 60, 196, 995, 1366, 1505, 1868
MvnI CGCG 1 cut(s) 1392
MwoI GCNNNNNNNGC 4 cut(s) 556, 1398, 1879, 1900
NcoI CCATGG 1 cut(s) 1632
NdeII GATC 9 cut(s) 244, 335, 833, 907, 1290, 1336, 1531, 1852, 1917
NlaIV GGNNCC 3 cut(s) 18, 414, 999
NmuCI GTSAC 3 cut(s) 340, 1739, 1858
NspV TTCGAA 1 cut(s) 579
PagI TCATGA 1 cut(s) 1293
PasI CCCWGGG 1 cut(s) 1867
PciSI GCTCTTC 1 cut(s) 1683
PctI GAATGC 2 cut(s) 208, 716
PdmI GAANNNNTTC 2 cut(s) 132, 1349
PfeI GAWTC 6 cut(s) 297, 449, 616, 885, 1345, 1661
PflMI CCANNNNNTGG 1 cut(s) 65
PkrI GCNGC 3 cut(s) 322, 403, 1726
Psp124BI GAGCTC 1 cut(s) 53
Psp6I CCWGG 6 cut(s) 58, 194, 993, 1364, 1503, 1866
PspGI CCWGG 6 cut(s) 58, 194, 993, 1364, 1503, 1866
PspN4I GGNNCC 3 cut(s) 18, 414, 999
PspPI GGNCC 1 cut(s) 998
PstI CTGCAG 2 cut(s) 322, 1686
PsuI RGATCY 2 cut(s) 907, 1336
PvuII CAGCTG 1 cut(s) 1724
RsaI GTAC 4 cut(s) 18, 753, 770, 1087
RsaNI GTAC 4 cut(s) 17, 752, 769, 1086
RseI CAYNNNNRTG 1 cut(s) 44
SacI GAGCTC 1 cut(s) 53
SapI GCTCTTC 1 cut(s) 1683
SaqAI TTAA 5 cut(s) 215, 474, 708, 920, 1055
SatI GCNGC 3 cut(s) 321, 402, 1725
Sau3AI GATC 9 cut(s) 244, 335, 833, 907, 1290, 1336, 1531, 1852, 1917
Sau96I GGNCC 1 cut(s) 998
ScrFI CCNGG 6 cut(s) 60, 196, 995, 1366, 1505, 1868
SduI GDGCHC 1 cut(s) 53
SfaNI GCATC 5 cut(s) 45, 811, 830, 964, 1700
SfcI CTRYAG 3 cut(s) 318, 1682, 1936
SfuI TTCGAA 1 cut(s) 579
SmiMI CAYNNNNRTG 1 cut(s) 44
SmlI CTYRAG 1 cut(s) 1649
SmoI CTYRAG 1 cut(s) 1649
SsiI CCGC 5 cut(s) 313, 683, 696, 1199, 1847
SspI AATATT 1 cut(s) 966
SspMI CTAG 4 cut(s) 359, 461, 566, 902
SstI GAGCTC 1 cut(s) 53
StyD4I CCNGG 6 cut(s) 58, 194, 993, 1364, 1503, 1866
StyI CCWWGG 3 cut(s) 416, 1632, 1773
TaaI ACNGT 3 cut(s) 11, 83, 166
TaiI ACGT 1 cut(s) 121
TaqI TCGA 9 cut(s) 42, 300, 579, 661, 787, 808, 1534, 1821, 1916
TatI WGTACW 1 cut(s) 751
TfiI GAWTC 6 cut(s) 297, 449, 616, 885, 1345, 1661
Tru1I TTAA 5 cut(s) 215, 474, 708, 920, 1055
Tru9I TTAA 5 cut(s) 215, 474, 708, 920, 1055
TseFI GTSAC 3 cut(s) 340, 1739, 1858
TseI GCWGC 3 cut(s) 320, 401, 1724
Tsp45I GTSAC 3 cut(s) 340, 1739, 1858
TspDTI ATGAA 5 cut(s) 210, 1295, 1310, 1458, 1534
TspGWI ACGGA 2 cut(s) 127, 359
Van91I CCANNNNNTGG 1 cut(s) 65
XagI CCTNNNNNAGG 1 cut(s) 1652
XcmI CCANNNNNNNNNTGG 1 cut(s) 751
XmiI GTMKAC 2 cut(s) 677, 1370
XmnI GAANNNNTTC 2 cut(s) 132, 1349
XspI CTAG 4 cut(s) 359, 461, 566, 902
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.