Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0015513

Physical Location & Seq

Genomic Coordinates Reverse (-)

57196654 .. 57200393

Gene Structure 3740 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0485300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGGCGAGGACATATGCACTAGGGCTCATCACAGCCGCAGCTGCCTCCGCCTCCTTGTCAAACCCCAAGACTGCTTATGCCGACGGCCCTTTCGGCTTCTCCCCCTTCTCTTCTCCCAAGGCTCCCCAATTTCCTTCTCCCGTTCAATCGCCGCCGTCCGATTCTCCGGCGGCTGCTGCTGAGGCTCCTCCTCCTCCTCCGCCCCCGAAGCCTCGCAATGATTACCCGAGGACCACTTCGGCCGGGTTCGATCCCGACCCGCTGGAGCGCGGTGCCAAGTATGCCAAAGATATCAGCAACTCTAAGGACGCCAAAAAGATATTTGAAGTTCTGAAGAAGCAAGAAGAGACGAGGCAGGTTGAGTTGTCTGCAAAGGAGGCAGAGTTCAAGGCCATGCAAGCTCAAGCTGAAACTGAGAGGCAAAGGGTCATCTATGATGAGCAAAAGAAACTAGCTCAGCATCAAGCGCAAACAAAATCTCAGATGGCTCGCTATGAAGATGAGTTGAAAAGGAAGAGGATGCAGGCAGAGAATGAATACCACAGAGATAGGAATAGAGAGCTTGTAAAAATGCAAGAAGAATCATCTATCAGACAGGAGCAAGCTCGACGGGCGGCAGAAGAACAAATCCAAGCACAACGTCGTCAGACAGAGCGGGAAAAGGCTGAGATAGAACGTGAAACAATAAGAGTGAGGGCATTTGCAGAAGCAGAAGGGAGAGCACATGAAGCAAAACTAGCTGAAGAGGTTAACAGGCGAATACTAGTAGACCGGGCAAATGCGGAGAGAGAGAAATGGGTTGCTGCCATAAATACAACTTTTGATCATATTGGAGGGGGACTGAAAGCCATTCTGACGGATCAGAATAAATTAGTTGTTGCTGTTGGGGGAGTGACAGCACTAGCTGCAGGCGTTTATACAACAAGAGAAGGTGCAAAGGTGATATGGAGCTATGTGGACAGAATATTGGGACAACCATCCCTTATCAGAGAGTCTTCTAAAGGGAAATACCCTTGGTCAGGGTTATTTTCACGTTCCCCATCTACGAAGAATGGGAAACCCTTTGGTGATGTTGTTTTACACCCATCTCTTCAGAAAAGAATAGAACATTTAGCTGGTGCAACTGCAAATACAAAATCTCATCAGGCACCCTTCAGAAACATGCTCTTCTATGGTCCTCCCGGAACAGGGAAAACAATGGCTGCTAGAGAGATGGCTCGTAAATCTGGATTGGATTACGCACTGATGACAGGAGGGGATGTTGCTCCACTCGGACCGCAGGCTGTTACCAAGATACACGAGTTATTTGATTGGGCCAAAAAGTCACGGAGGGGTTTGTTGCTTTTCATTGATGAAGCTGACGCATTTTTGTGCGAGCGGAACAAAACCTACATGAGTGAAGCTCAAAGAAGTGCACTCAATGCTCTTCTATTCCGCACTGGTGACCAGTCCAAGGACATAGTCCTTGCCCTCGCCACAAACCGTCCCGGTGATCTTGATTCAGCTGTGTCTGATCGTATTGATGAAGTGCTTGAATTCCCCTTGCCTGGGGAAGATGAACGCTTTAAGCTGCTAAAGTTGTATCTGGACAAGTACATTGTTAATGCTGACTCGGGAAAACCTGGACGGTTCCGGAACTTGTTCAAAAGACAACAGCAGAAGATAGAAATGAAAGGTTTGACGGATGATATGCTGAGAGAAGCAGCGGCTAAGACTGACGGATTTTCTGGGAGAGAAATTGCAAAAATGATGGCAAGTGTCCAGGCTGCTGTTTATGGGAGTGAGAATTGTGTGCTTGACCCAACCCTATTTCGTGAAGTTGTAGACTACAAGGTCGCTGAGCATCAACAGAGAAGAAAATTGGCAGCTGGAGAGAAAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006029 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0015012 GO:0019538 GO:0030166 GO:0030201 GO:0034645 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0050650 GO:0050654 GO:0071704 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Branch

Protein Analysis

627

Amino Acids

69.94

Weight (kDa)

9.33

Isoelectric Point (pI)

48.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ATAD3_N	PF12037	68 - 330	6.7e-108	ATPase family AAA domain-containing protein 3, N-terminal
AAA	PF00004	388 - 515	3.2e-24	ATPase family associated with various cellular activities (AAA)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015513)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g03340
malus_domestica	MD02G1033100.v1.1 MD15G1173500.v1.1
prunus_persica	Prupe.7G242200_v2.0.a1 Prupe.7G242200_v2.0.a1
pyrus_communis	pycom02g02720 pycom15g15550
rosa_chinensis	RchiOBHm_Chr2g0088581
rosa_laevigata	RLG00000015967
rosa_roxburghii	Rroxscaffold_2G00152530
rosa_rugosa	Rorug01G0485300
rosa_samantha	Rh2AG040400 Rh2BG039300 Rh2CG040000 Rh2DG039600
rosa_wichuraiana	Rw2G003150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1832
Acc36I	ACCTGC	1 cut(s)	346
AccB1I	GGYRCC	2 cut(s)	272, 1147
AccBSI	CCGCTC	2 cut(s)	655, 1378
AccI	GTMKAC	2 cut(s)	768, 1824
AccII	CGCG	1 cut(s)	270
AccIII	TCCGGA	1 cut(s)	1632
AclWI	GGATC	2 cut(s)	245, 867
AcoI	YGGCCR	1 cut(s)	240
AcsI	RAATTY	2 cut(s)	1535, 1878
AcuI	CTGAAG	4 cut(s)	353, 762, 1076, 1138
AcyI	GRCGYC	1 cut(s)	309
AfaI	GTAC	1 cut(s)	1595
AfiI	CCNNNNNNNGG	6 cut(s)	1019, 1187, 1188, 1453, 1547, 1548
AgsI	TTSAA	6 cut(s)	146, 326, 388, 508, 1535, 1645
AhlI	ACTAGT	1 cut(s)	763
AjnI	CCWGG	3 cut(s)	1546, 1621, 1761
AloI	GAACNNNNNNTCC	2 cut(s)	368, 400
Alw21I	GWGCWC	2 cut(s)	724, 1417
Alw26I	GTCTC	1 cut(s)	341
Alw44I	GTGCAC	1 cut(s)	1413
AlwI	GGATC	2 cut(s)	245, 867
Ama87I	CYCGRG	2 cut(s)	226, 1612
Aor13HI	TCCGGA	1 cut(s)	1632
AoxI	GGCC	4 cut(s)	85, 240, 390, 1314
ApaLI	GTGCAC	1 cut(s)	1413
ApoI	RAATTY	2 cut(s)	1535, 1878
ArsI	GACNNNNNNTTYG	2 cut(s)	74, 106
Asp700I	GAANNNNTTC	1 cut(s)	1640
AspLEI	GCGC	2 cut(s)	270, 469
AspS9I	GGNCC	5 cut(s)	86, 231, 1175, 1274, 1314
AsuC2I	CCSGG	4 cut(s)	244, 773, 1182, 1488
AsuHPI	GGTGA	4 cut(s)	952, 1079, 1454, 1502
AvaI	CYCGRG	2 cut(s)	226, 1612
AvaII	GGWCC	3 cut(s)	231, 1175, 1274
BaeGI	GKGCMC	1 cut(s)	1417
BaeI	ACNNNNGTAYC	2 cut(s)	1286, 1319
BanI	GGYRCC	2 cut(s)	272, 1147
BanII	GRGCYC	1 cut(s)	27
BauI	CACGAG	1 cut(s)	1298
BbsI	GAAGAC	1 cut(s)	987
Bbv12I	GWGCWC	2 cut(s)	724, 1417
BbvCI	CCTCAGC	1 cut(s)	180
BccI	CCATC	6 cut(s)	478, 985, 1048, 1093, 1207, 1744
BceAI	ACGGC	2 cut(s)	100, 139
BciT130I	CCWGG	3 cut(s)	1548, 1623, 1763
BclI	TGATCA	1 cut(s)	823
BcnI	CCSGG	4 cut(s)	244, 773, 1182, 1488
BcoDI	GTCTC	1 cut(s)	341
BcuI	ACTAGT	1 cut(s)	763
BfaI	CTAG	6 cut(s)	20, 452, 737, 764, 902, 1206
BfmI	CTRYAG	1 cut(s)	906
BfuAI	ACCTGC	1 cut(s)	346
BglI	GCCNNNNNGGC	1 cut(s)	93
BlpI	GCTNAGC	2 cut(s)	456, 1839
Bme1390I	CCNGG	7 cut(s)	244, 773, 1182, 1488, 1548, 1623, 1763
Bme18I	GGWCC	3 cut(s)	231, 1175, 1274
BmeT110I	CYCGRG	2 cut(s)	226, 1612
BmgT120I	GGNCC	5 cut(s)	86, 231, 1175, 1274, 1314
BmiI	GGNNCC	5 cut(s)	123, 186, 274, 1149, 1631
BmrFI	CCNGG	7 cut(s)	244, 773, 1182, 1488, 1548, 1623, 1763
BmsI	GCATC	3 cut(s)	469, 510, 1852
BpiI	GAAGAC	1 cut(s)	987
BplI	GAGNNNNNCTC	2 cut(s)	1387, 1419
BpmI	CTGGAG	1 cut(s)	284
Bpu10I	CCTNAGC	1 cut(s)	180
Bpu1102I	GCTNAGC	2 cut(s)	456, 1839
BpuEI	CTTGAG	1 cut(s)	387
BpuMI	CCSGG	4 cut(s)	244, 773, 1182, 1488
BsaHI	GRCGYC	1 cut(s)	309
BsaJI	CCNNGG	5 cut(s)	117, 227, 1013, 1452, 1547
BsaWI	WCCGGW	1 cut(s)	1632
BsaXI	ACNNNNNCTCC	4 cut(s)	368, 398, 1245, 1275
Bsc4I	CCNNNNNNNGG	6 cut(s)	1019, 1187, 1188, 1453, 1547, 1548
Bse1I	ACTGG	2 cut(s)	1444, 1447
Bse3DI	GCAATG	1 cut(s)	223
BseAI	TCCGGA	1 cut(s)	1632
BseBI	CCWGG	3 cut(s)	1548, 1623, 1763
BseDI	CCNNGG	5 cut(s)	117, 227, 1013, 1452, 1547
BseGI	GGATG	4 cut(s)	525, 977, 1264, 1690
BseLI	CCNNNNNNNGG	6 cut(s)	1019, 1187, 1188, 1453, 1547, 1548
BseMI	GCAATG	1 cut(s)	223
BseMII	CTCAG	7 cut(s)	171, 405, 470, 494, 657, 1685, 1830
BseNI	ACTGG	2 cut(s)	1444, 1447
BseRI	GAGGAG	4 cut(s)	177, 180, 183, 186
BseSI	GKGCMC	1 cut(s)	1417
BseX3I	CGGCCG	1 cut(s)	240
Bsh1236I	CGCG	1 cut(s)	270
Bsh1285I	CGRYCG	1 cut(s)	243
BshFI	GGCC	4 cut(s)	87, 242, 392, 1316
BshNI	GGYRCC	2 cut(s)	272, 1147
BsiEI	CGRYCG	1 cut(s)	243
BsiHKAI	GWGCWC	2 cut(s)	724, 1417
BsiHKCI	CYCGRG	2 cut(s)	226, 1612
BsiSI	CCGG	6 cut(s)	167, 243, 772, 1182, 1488, 1633
BslFI	GGGAC	3 cut(s)	852, 984, 1470
BslI	CCNNNNNNNGG	6 cut(s)	1019, 1187, 1188, 1453, 1547, 1548
BsmAI	GTCTC	1 cut(s)	341
BsmBI	CGTCTC	1 cut(s)	341
BsmFI	GGGAC	3 cut(s)	852, 984, 1470
BsnI	GGCC	4 cut(s)	87, 242, 392, 1316
BsoBI	CYCGRG	2 cut(s)	226, 1612
Bsp1286I	GDGCHC	3 cut(s)	27, 724, 1417
Bsp13I	TCCGGA	1 cut(s)	1632
Bsp143I	GATC	5 cut(s)	250, 823, 859, 1492, 1513
Bsp1720I	GCTNAGC	2 cut(s)	456, 1839
BspANI	GGCC	4 cut(s)	87, 242, 392, 1316
BspCNI	CTCAG	7 cut(s)	172, 406, 469, 493, 658, 1686, 1831
BspEI	TCCGGA	1 cut(s)	1632
BspFNI	CGCG	1 cut(s)	270
BspLI	GGNNCC	5 cut(s)	123, 186, 274, 1149, 1631
BspMAI	CTGCAG	1 cut(s)	910
BspMI	ACCTGC	1 cut(s)	346
BspPI	GGATC	2 cut(s)	245, 867
BspQI	GCTCTTC	2 cut(s)	1172, 1431
BspT107I	GGYRCC	2 cut(s)	272, 1147
BsrBI	CCGCTC	2 cut(s)	655, 1378
BsrDI	GCAATG	1 cut(s)	223
BsrI	ACTGG	2 cut(s)	1444, 1447
BssECI	CCNNGG	5 cut(s)	117, 227, 1013, 1452, 1547
BssMI	GATC	5 cut(s)	250, 823, 859, 1492, 1513
BssNI	GRCGYC	1 cut(s)	309
BssSI	CACGAG	1 cut(s)	1298
BssT1I	CCWWGG	3 cut(s)	117, 1013, 1452
Bst2BI	CACGAG	1 cut(s)	1298
Bst2UI	CCWGG	3 cut(s)	1548, 1623, 1763
Bst4CI	ACNGT	2 cut(s)	1484, 1629
Bst6I	CTCTTC	7 cut(s)	115, 339, 509, 738, 1095, 1172, 1431
BstACI	GRCGYC	1 cut(s)	309
BstAPI	GCANNNNNTGC	2 cut(s)	905, 1421
BstC8I	GCNNGC	7 cut(s)	399, 490, 525, 603, 910, 1281, 1376
BstDEI	CTNAG	9 cut(s)	180, 303, 414, 456, 480, 666, 1694, 1710, 1839
BstEII	GGTNACC	1 cut(s)	1442
BstENI	CCTNNNNNAGG	1 cut(s)	1017
BstF5I	GGATG	4 cut(s)	525, 977, 1264, 1690
BstFNI	CGCG	1 cut(s)	270
BstHHI	GCGC	2 cut(s)	270, 469
BstKTI	GATC	5 cut(s)	253, 826, 862, 1495, 1516
BstMAI	GTCTC	1 cut(s)	341
BstMBI	GATC	5 cut(s)	250, 823, 859, 1492, 1513
BstMCI	CGRYCG	1 cut(s)	243
BstNI	CCWGG	3 cut(s)	1548, 1623, 1763
BstNSI	RCATGY	1 cut(s)	1165
BstPI	GGTNACC	1 cut(s)	1442
BstSCI	CCNGG	7 cut(s)	242, 771, 1180, 1486, 1546, 1621, 1761
BstSFI	CTRYAG	1 cut(s)	906
BstSLI	GKGCMC	1 cut(s)	1417
BstUI	CGCG	1 cut(s)	270
BstV2I	GAAGAC	1 cut(s)	987
BstZI	CGGCCG	1 cut(s)	240
BsuRI	GGCC	4 cut(s)	87, 242, 392, 1316
BtsCI	GGATG	4 cut(s)	525, 977, 1264, 1690
BtsIMutI	CAGTG	2 cut(s)	1241, 1437
BveI	ACCTGC	1 cut(s)	346
Cac8I	GCNNGC	7 cut(s)	399, 490, 525, 603, 910, 1281, 1376
CfoI	GCGC	2 cut(s)	270, 469
Cfr13I	GGNCC	5 cut(s)	86, 231, 1175, 1274, 1314
CpoI	CGGWCCG	1 cut(s)	1274
CseI	GACGC	2 cut(s)	317, 1370
Csp6I	GTAC	1 cut(s)	1594
CspI	CGGWCCG	1 cut(s)	1274
CviAII	CATG	4 cut(s)	394, 725, 1162, 1393
CviQI	GTAC	1 cut(s)	1594
DdeI	CTNAG	9 cut(s)	180, 303, 414, 456, 480, 666, 1694, 1710, 1839
DpnI	GATC	5 cut(s)	252, 825, 861, 1494, 1515
DpnII	GATC	5 cut(s)	250, 823, 859, 1492, 1513
DrdI	GACNNNNNNGTC	1 cut(s)	1832
DseDI	GACNNNNNNGTC	1 cut(s)	1832
EaeI	YGGCCR	1 cut(s)	240
EagI	CGGCCG	1 cut(s)	240
Eam1104I	CTCTTC	7 cut(s)	115, 339, 509, 738, 1095, 1172, 1431
EarI	CTCTTC	7 cut(s)	115, 339, 509, 738, 1095, 1172, 1431
EciI	GGCGGA	2 cut(s)	37, 189
EclXI	CGGCCG	1 cut(s)	240
Eco130I	CCWWGG	3 cut(s)	117, 1013, 1452
Eco24I	GRGCYC	1 cut(s)	27
Eco32I	GATATC	1 cut(s)	292
Eco47I	GGWCC	3 cut(s)	231, 1175, 1274
Eco52I	CGGCCG	1 cut(s)	240
Eco57I	CTGAAG	4 cut(s)	353, 762, 1076, 1138
Eco88I	CYCGRG	2 cut(s)	226, 1612
Eco91I	GGTNACC	1 cut(s)	1442
EcoNI	CCTNNNNNAGG	1 cut(s)	1017
EcoO65I	GGTNACC	1 cut(s)	1442
EcoRI	GAATTC	1 cut(s)	1535
EcoRII	CCWGG	3 cut(s)	1546, 1621, 1761
EcoRV	GATATC	1 cut(s)	292
EcoT14I	CCWWGG	3 cut(s)	117, 1013, 1452
EcoT38I	GRGCYC	1 cut(s)	27
ErhI	CCWWGG	3 cut(s)	117, 1013, 1452
Esp3I	CGTCTC	1 cut(s)	341
FaeI	CATG	4 cut(s)	397, 728, 1165, 1396
FaqI	GGGAC	3 cut(s)	852, 984, 1470
FatI	CATG	4 cut(s)	393, 724, 1161, 1392
FauI	CCCGC	2 cut(s)	267, 648
FauNDI	CATATG	1 cut(s)	13
FbaI	TGATCA	1 cut(s)	823
FblI	GTMKAC	2 cut(s)	768, 1824
FokI	GGATG	4 cut(s)	532, 964, 1271, 1697
FriOI	GRGCYC	1 cut(s)	27
FspBI	CTAG	6 cut(s)	20, 452, 737, 764, 902, 1206
GlaI	GCGC	2 cut(s)	269, 468
GsuI	CTGGAG	1 cut(s)	284
HaeIII	GGCC	4 cut(s)	87, 242, 392, 1316
HapII	CCGG	6 cut(s)	167, 243, 772, 1182, 1488, 1633
HgaI	GACGC	2 cut(s)	317, 1370
HhaI	GCGC	2 cut(s)	270, 469
Hin1I	GRCGYC	1 cut(s)	309
Hin1II	CATG	4 cut(s)	397, 728, 1165, 1396
Hin6I	GCGC	2 cut(s)	268, 467
HinP1I	GCGC	2 cut(s)	268, 467
HincII	GTYRAC	1 cut(s)	751
HindII	GTYRAC	1 cut(s)	751
HinfI	GANTC	5 cut(s)	161, 581, 992, 1499, 1610
HpaI	GTTAAC	1 cut(s)	751
HpaII	CCGG	6 cut(s)	167, 243, 772, 1182, 1488, 1633
HphI	GGTGA	4 cut(s)	952, 1079, 1454, 1502
Hpy166II	GTNNAC	5 cut(s)	751, 769, 958, 1415, 1825
Hpy188III	TCNNGA	7 cut(s)	254, 1227, 1496, 1586, 1614, 1633, 1814
Hpy8I	GTNNAC	5 cut(s)	751, 769, 958, 1415, 1825
Hpy99I	CGWCG	3 cut(s)	86, 612, 645
HpyAV	CCTTC	5 cut(s)	115, 144, 707, 923, 1162
HpyCH4III	ACNGT	2 cut(s)	1484, 1629
HpyCH4IV	ACGT	3 cut(s)	640, 676, 1033
HpyF3I	CTNAG	9 cut(s)	180, 303, 414, 456, 480, 666, 1694, 1710, 1839
HpySE526I	ACGT	3 cut(s)	640, 676, 1033
Hsp92I	GRCGYC	1 cut(s)	309
Hsp92II	CATG	4 cut(s)	397, 728, 1165, 1396
HspAI	GCGC	2 cut(s)	268, 467
Kpn2I	TCCGGA	1 cut(s)	1632
Ksp22I	TGATCA	1 cut(s)	823
KspAI	GTTAAC	1 cut(s)	751
Kzo9I	GATC	5 cut(s)	250, 823, 859, 1492, 1513
LguI	GCTCTTC	2 cut(s)	1172, 1431
LmnI	GCTCC	6 cut(s)	127, 190, 265, 598, 948, 1270
LweI	GCATC	3 cut(s)	469, 510, 1852
MaeI	CTAG	6 cut(s)	20, 452, 737, 764, 902, 1206
MaeII	ACGT	3 cut(s)	640, 676, 1033
MaeIII	GTNAC	4 cut(s)	892, 1285, 1323, 1442
MalI	GATC	5 cut(s)	252, 825, 861, 1494, 1515
MbiI	CCGCTC	2 cut(s)	655, 1378
MboI	GATC	5 cut(s)	250, 823, 859, 1492, 1513
MhlI	GDGCHC	3 cut(s)	27, 724, 1417
MluCI	AATT	7 cut(s)	128, 869, 1535, 1737, 1786, 1859, 1878
MlyI	GAGTC	2 cut(s)	1001, 1604
MroI	TCCGGA	1 cut(s)	1632
MroXI	GAANNNNTTC	1 cut(s)	1640
MseI	TTAA	4 cut(s)	750, 1566, 1602, 1882
MslI	CAYNNNNRTG	1 cut(s)	1369
MspA1I	CMGCKG	5 cut(s)	41, 262, 1505, 1706, 1868
MspI	CCGG	6 cut(s)	167, 243, 772, 1182, 1488, 1633
MspR9I	CCNGG	7 cut(s)	244, 773, 1182, 1488, 1548, 1623, 1763
MvaI	CCWGG	3 cut(s)	1548, 1623, 1763
MvnI	CGCG	1 cut(s)	270
NciI	CCSGG	4 cut(s)	244, 773, 1182, 1488
NdeI	CATATG	1 cut(s)	13
NdeII	GATC	5 cut(s)	250, 823, 859, 1492, 1513
NlaIII	CATG	4 cut(s)	397, 728, 1165, 1396
NlaIV	GGNNCC	5 cut(s)	123, 186, 274, 1149, 1631
NmuCI	GTSAC	3 cut(s)	892, 1323, 1442
NspI	RCATGY	1 cut(s)	1165
PciSI	GCTCTTC	2 cut(s)	1172, 1431
PdmI	GAANNNNTTC	1 cut(s)	1640
PfeI	GAWTC	3 cut(s)	161, 581, 1499
PflFI	GACNNNGTC	1 cut(s)	1460
PfoI	TCCNGGA	1 cut(s)	1180
PleI	GAGTC	2 cut(s)	1000, 1604
PpsI	GAGTC	2 cut(s)	1000, 1604
Psp6I	CCWGG	3 cut(s)	1546, 1621, 1761
PspEI	GGTNACC	1 cut(s)	1442
PspGI	CCWGG	3 cut(s)	1546, 1621, 1761
PspN4I	GGNNCC	5 cut(s)	123, 186, 274, 1149, 1631
PspPI	GGNCC	5 cut(s)	86, 231, 1175, 1274, 1314
PsrI	GAACNNNNNNTAC	2 cut(s)	1373, 1405
PstI	CTGCAG	1 cut(s)	910
PsyI	GACNNNGTC	1 cut(s)	1460
PvuII	CAGCTG	3 cut(s)	41, 1505, 1868
RsaI	GTAC	1 cut(s)	1595
RsaNI	GTAC	1 cut(s)	1594
RseI	CAYNNNNRTG	1 cut(s)	1369
Rsr2I	CGGWCCG	1 cut(s)	1274
RsrII	CGGWCCG	1 cut(s)	1274
SapI	GCTCTTC	2 cut(s)	1172, 1431
SaqAI	TTAA	4 cut(s)	750, 1566, 1602, 1882
Sau3AI	GATC	5 cut(s)	250, 823, 859, 1492, 1513
Sau96I	GGNCC	5 cut(s)	86, 231, 1175, 1274, 1314
SchI	GAGTC	2 cut(s)	1001, 1604
ScrFI	CCNGG	7 cut(s)	244, 773, 1182, 1488, 1548, 1623, 1763
SduI	GDGCHC	3 cut(s)	27, 724, 1417
SfaNI	GCATC	3 cut(s)	469, 510, 1852
SfcI	CTRYAG	1 cut(s)	906
SinI	GGWCC	3 cut(s)	231, 1175, 1274
SmiMI	CAYNNNNRTG	1 cut(s)	1369
SmlI	CTYRAG	1 cut(s)	402
SmoI	CTYRAG	1 cut(s)	402
SpeI	ACTAGT	1 cut(s)	763
Sse9I	AATT	7 cut(s)	128, 869, 1535, 1737, 1786, 1859, 1878
SspI	AATATT	1 cut(s)	966
SspMI	CTAG	6 cut(s)	20, 452, 737, 764, 902, 1206
StyD4I	CCNGG	7 cut(s)	242, 771, 1180, 1486, 1546, 1621, 1761
StyI	CCWWGG	3 cut(s)	117, 1013, 1452
TaaI	ACNGT	2 cut(s)	1484, 1629
TaiI	ACGT	3 cut(s)	643, 679, 1036
TaqI	TCGA	2 cut(s)	249, 607
TasI	AATT	7 cut(s)	128, 869, 1535, 1737, 1786, 1859, 1878
TatI	WGTACW	1 cut(s)	1593
TauI	GCSGC	5 cut(s)	38, 154, 173, 617, 1709
TfiI	GAWTC	3 cut(s)	161, 581, 1499
Tru1I	TTAA	4 cut(s)	750, 1566, 1602, 1882
Tru9I	TTAA	4 cut(s)	750, 1566, 1602, 1882
TscAI	CASTG	2 cut(s)	1248, 1444
TseFI	GTSAC	3 cut(s)	892, 1323, 1442
Tsp45I	GTSAC	3 cut(s)	892, 1323, 1442
TspDTI	ATGAA	8 cut(s)	510, 549, 741, 1336, 1368, 1539, 1572, 1685
TspGWI	ACGGA	4 cut(s)	872, 1342, 1697, 1734
TspRI	CASTG	2 cut(s)	1248, 1444
Tth111I	GACNNNGTC	1 cut(s)	1460
VneI	GTGCAC	1 cut(s)	1413
VpaK11BI	GGWCC	3 cut(s)	231, 1175, 1274
XagI	CCTNNNNNAGG	1 cut(s)	1017
XapI	RAATTY	2 cut(s)	1535, 1878
XceI	RCATGY	1 cut(s)	1165
XmiI	GTMKAC	2 cut(s)	768, 1824
XmnI	GAANNNNTTC	1 cut(s)	1640
XspI	CTAG	6 cut(s)	20, 452, 737, 764, 902, 1206

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.