Rorug02G0344800

Protein SYS1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0010851
Physical Location & Seq
Forward (+)
43038420 .. 43041453
3034 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0344800.1

Sequence Viewer

Length: 2865 bp
ATGGCTGATGCACTCATCTCCGTGCTTCTGGAGCAATTGGCTTCAATAGTATATCAATACACAAATCAAGTGGTGAAACTGGTTTTGAATGCTGAGAAAGACGTTTATAGTTTCAACAGCAAGCTCAAAGCTATCCAAGTTGTGCTTAAGGATGCAGAGAAGAAACAAGTGACAGATCCTAGGGTGGAAGACTGGTTGGAGAAGCTGAAAGATGTGTCATACGAGATGGAAGACGTGCTAGATGAGTGGAACACTGAAATTCTCAGACTACAAGTAGAGCAGAAGCAAAAGAAGGGAGGAGAAAGTGTTCTTGTTATCAAGAAGAAGGTATGTTTCCCCATGCCCACTGTTTGCTTTTGTTTTGGCCAAGCCAATAAGGTCATTCATCGTCATAACATAGCTAGAAGGATAGAGGAACTGAATGAGAAGTTAACTTTGATTGCTGCTGAAAGAGACATGCATGGCTTTCATCAGTCCACAAAAAGTGACTCTGATGATCAACTACTTTTTAATCGACAGAAGACTTCATCTTTGGTTGATATATCTATGATATTTGGCCGAGAAGAAGAAAAAGAAATGTTGTTGAGCAAGCTGTTGAGAGAGGGTAGCCTAGAAGGGGGGCAGTTCCTTGTCATTCCTATTGTAGGGATGGGAGGGATGGGGAAAACAACTCTTGCCCAATTAGCCTATAATGATGAAAAGGTTACAGCCCATTTTGATAAGAAAGTATGGGTTTGTGTCTCGAGCTCTTTTGAGGAGATTAAGATTGCCAAAGCGATCATTGAGAGTCTTGATAAAAATGAAACTCCAAAGAGTTCAAATGAGTTGGAAACTCTATTAATATGTATAAGGTCACACGTTAAGGATAAGAAGTTCCTTCTTGTCCTAGATGATGTATGGACGGAAAATCCAAAAGAGTGGGAAAATTTGAAACTACCAGTAATAATGCAAAGTTGTGCTGAAGGTAGTACAATACTAGTGACCACGCGAAAACAAGGGGTTGCTAAAATGATGAAAGCAACCAGTAGCATGATCTATTTAGACAAGTTGAGCAATAGGGATTGTCTAGCATTGTTCAATAGCATCGCATTTTTGGACAGGAAAGAAGATGAGGCTAATGGGTTTGGAGCTATTGGTGAGGAAATTGTGAAAAAGTGTGATGGTTTGCCTCTTGCTGCAAAAACTTTAGGCAGTCTAGTGTGGTATAAAAAAACAAGAGAAGAATGGTGGGATGTTCTAAATAGTAAGATATGGGAATTAGAGGAAGTTGAGGAACAAGTTTTCCGACCATTATTACTAAGTTATTATGATTTGGCCCCATCAGTCAAAATGTGTTTTTTGTATTGTGCTATATTTCCCAAAGATTATGATTTCAAAAAAGATAATTTAATTGAGCTTTGGATGTCACAAAATTACCTTTATTCAAAGGAAAATAAAGAAAAGAGAAGAAAAGGTCAAAATTATTTTGAGAGTCTAGCAATGCGGTCTTTCTTTCAAAATTTTGACATAGATGAGATGGGAAATATTATAGGGTGCAAAATGCATGATATTGTGCATGACTTTGTGCAGTTTCTTACCAAAAAAGAATGTGTTATTATAGAAGCAGTTGAGGGTGATAATAAAATAGTGGAGCTACCGGGTGATAAGGTTCGTCATTTGACCTTAACAAGTATACCCAAATGTCCACTTTCATTTCCTACTTCATGTTACATGTGCAAAAATATTCGTACCCTCTCAATCTTTAATTCAAGAATTACAACCGTAAGTCCCGGTTCAATTGTGCAAATGAAATGCCTTAGGACATTGAATTTGAGTCGTAATGGCCTCACTGAACTTCCAAAAGAGCTAGGCGAATTGATTCATTTGAGATATATGGATTTGACTCATAATCGGGATTTAAAAGAATTACCGGATGCTTTGTGTGATTTATACAATCTAGAAACTCTGGTTGTTGTAGAGTGCACGAGTCTTGAGAAACTACCCAAGGCAATGGGAAAGTTGATCAACTTGAAGCATCTATATGTTCGGCATTGTTTTAAGCTGAAGTACTTACCAAAAGGGATTGGGAGTTTGAAAAGTCTGCAAGCACTGGACTTCTTTTTTGTATGTGACGATAATGAAGCCTTGAAATTAGGAGATATCGGAATCATGGACCAGCTTCAGGGGAGCCTAGGGATAACAAGGTTAGGGAATAATGCGAAAGTTGATGCGAGTGAGATTGAGAAAGCACAGTTGAGGAATAAGGAGCACATCACTCATTTGGGAGTATATTTCGGCTTTAAACTGAGCTCACAGAGAGAAGGTGATGAAGAAATAGTGAAAGCATTGCAACCACATCAAAATTTGGAATTTTTAATCATTTCGTGTTGCCATGGCACCACTGAGTCTCTCTATTGGATCAAGTCTCTGCACAATTTAAGAAAAGTTTCTCTCACTGGTTGGCGATTTTGTGAACTTTTGCCTCCTCTTGGAAAATTGCCATCGCTTGAAATTCTGGAGATAATAGGGATGTCGAATGTGAAAAAGGTGGGAGTTGAGTTTCTGGGAATAGAAGAAGAAACTGAAACACTCTCAGGAATTCTATTCCCCAAATTGAAACGACTTTATTTCAGTGTTATGTTCGAGTGGGAAGAGTGGGAAGGAATACCAAGGGATTCTTCTGAAATTACAATAATGCCTCGCCTTTCTTCCTTGCAAATTCGGGAGTGCCGAGAGCTCAAAGCACTGCCAGACTTCCTGCACAAGATAACAACACTGCGTACTTTGGAGATCAAGGCTTGTCCAATTCTCGAACGACATTACAAAAAAGGCATGGGGAAGGAGTGGCACAACATTTCTCACATCCCAAACGTCACAATTGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SYS1

Protein Analysis

954

Amino Acids

109.41

Weight (kDa)

6.47

Isoelectric Point (pI)

44.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 97 2.5e-21 Rx N-terminal domain
NB-ARC PF00931 188 - 365 4e-37 NB-ARC domain
WHD_DRP PF23559 451 - 522 5.8e-23 Disease resistance protein Winged helix domain
LRR_8 PF13855 574 - 631 4.6e-09 Leucine rich repeat
LRR_14 PF23598 575 - 907 1.1e-29 Leucine-rich repeat region
LRR_8 PF13855 599 - 650 4e-06 Leucine rich repeat
LRR_R13L1-DRL21 PF25019 713 - 837 1.1e-23 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010851)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G79985 AT1G79985 AT1G79985
fragaria_vesca FvH4_6g31060 FvH4_6g49470
malus_domestica MD09G1213900.v1.1 MD17G1196000.v1.1
prunus_persica Prupe.3G071900_v2.0.a1 Prupe.3G071900_v2.0.a1
pyrus_communis pycom09g13080
rosa_chinensis RchiOBHm_Chr2g0137751
rosa_laevigata RLG00000019673
rosa_multiflora Rmu_sc0008270.1_g000012
rosa_roxburghii Rroxscaffold_2G00106870
rosa_rugosa Rorug02G0344700.1 Rorug02G0344800 Rorug02G0344900
rosa_samantha Rh2BG400000 Rh2DG414800
rosa_wichuraiana Rw2G032150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2375
AccI GTMKAC 1 cut(s) 1672
AccII CGCG 1 cut(s) 988
AciI CCGC 1 cut(s) 1483
AclWI GGATC 2 cut(s) 170, 2405
AcoI YGGCCR 2 cut(s) 364, 556
AcsI RAATTY 9 cut(s) 258, 925, 1498, 1807, 2341, 2348, 2490, 2577, 2697
AcuI CTGAAG 3 cut(s) 981, 2063, 2144
AfaI GTAC 4 cut(s) 970, 1729, 2048, 2761
AfiI CCNNNNNNNGG 4 cut(s) 616, 644, 2161, 2468
AflII CTTAAG 1 cut(s) 146
AflIII ACRYGT 2 cut(s) 856, 1710
AhlI ACTAGT 1 cut(s) 976
AjiI CACGTC 1 cut(s) 235
AjuI GAANNNNNNNTTGG 2 cut(s) 2641, 2673
AloI GAACNNNNNNTCC 6 cut(s) 291, 323, 857, 889, 1266, 1298
Alw21I GWGCWC 5 cut(s) 749, 1964, 2250, 2291, 2718
Alw26I GTCTC 4 cut(s) 447, 745, 2391, 2409
Alw44I GTGCAC 1 cut(s) 1960
AlwI GGATC 2 cut(s) 170, 2405
Ama87I CYCGRG 1 cut(s) 742
AoxI GGCC 4 cut(s) 364, 556, 1314, 1822
ApaLI GTGCAC 1 cut(s) 1960
ApeKI GCWGC 2 cut(s) 443, 1175
ApoI RAATTY 9 cut(s) 258, 925, 1498, 1807, 2341, 2348, 2490, 2577, 2697
ArsI GACNNNNNNTTYG 6 cut(s) 514, 546, 1792, 1824, 2084, 2116
AseI ATTAAT 1 cut(s) 839
Asp700I GAANNNNTTC 3 cut(s) 306, 1857, 2425
AspA2I CCTAGG 2 cut(s) 179, 2170
AspS9I GGNCC 2 cut(s) 1315, 2152
AsuC2I CCSGG 2 cut(s) 1638, 1770
AsuHPI GGTGA 5 cut(s) 85, 1148, 1625, 1652, 2315
AvaI CYCGRG 1 cut(s) 742
AvaII GGWCC 1 cut(s) 2152
AvrII CCTAGG 2 cut(s) 179, 2170
AxyI CCTNAGG 1 cut(s) 1796
BaeGI GKGCMC 1 cut(s) 1964
BalI TGGCCA 1 cut(s) 366
BanI GGYRCC 1 cut(s) 2375
BanII GRGCYC 3 cut(s) 749, 2291, 2718
BauI CACGAG 1 cut(s) 1963
BbsI GAAGAC 3 cut(s) 195, 237, 527
Bbv12I GWGCWC 5 cut(s) 749, 1964, 2250, 2291, 2718
BbvI GCAGC 2 cut(s) 430, 1162
BccI CCATC 7 cut(s) 220, 643, 652, 1154, 1327, 1510, 2488
BclI TGATCA 2 cut(s) 496, 2001
BcnI CCSGG 2 cut(s) 1638, 1770
BcoDI GTCTC 4 cut(s) 447, 745, 2391, 2409
BcuI ACTAGT 1 cut(s) 976
BfrI CTTAAG 1 cut(s) 146
BisI GCNGC 2 cut(s) 444, 1176
BlnI CCTAGG 2 cut(s) 179, 2170
BlsI GCNGC 2 cut(s) 445, 1177
BmcAI AGTACT 1 cut(s) 2048
Bme1390I CCNGG 2 cut(s) 1638, 1770
Bme18I GGWCC 1 cut(s) 2152
BmeT110I CYCGRG 1 cut(s) 742
BmgBI CACGTC 1 cut(s) 235
BmgT120I GGNCC 2 cut(s) 1315, 2152
BmiI GGNNCC 3 cut(s) 1317, 2168, 2377
BmrFI CCNGG 2 cut(s) 1638, 1770
BmsI GCATC 5 cut(s) 142, 1092, 1903, 2023, 2197
BpiI GAAGAC 3 cut(s) 195, 237, 527
BpmI CTGGAG 2 cut(s) 50, 2516
BpuEI CTTGAG 1 cut(s) 1991
BpuMI CCSGG 2 cut(s) 1638, 1770
BsaJI CCNNGG 5 cut(s) 179, 1983, 2170, 2371, 2648
BsaWI WCCGGW 1 cut(s) 1909
BsaXI ACNNNNNCTCC 2 cut(s) 291, 321
Bsc4I CCNNNNNNNGG 4 cut(s) 616, 644, 2161, 2468
Bse1I ACTGG 6 cut(s) 84, 197, 938, 1023, 2094, 2440
Bse21I CCTNAGG 1 cut(s) 1796
Bse3DI GCAATG 3 cut(s) 1485, 1995, 2324
BseDI CCNNGG 5 cut(s) 179, 1983, 2170, 2371, 2648
BseGI GGATG 8 cut(s) 157, 654, 663, 1237, 1407, 1918, 2514, 2841
BseLI CCNNNNNNNGG 4 cut(s) 616, 644, 2161, 2468
BseMI GCAATG 3 cut(s) 1485, 1995, 2324
BseMII CTCAG 5 cut(s) 84, 277, 2276, 2373, 2586
BseNI ACTGG 6 cut(s) 84, 197, 938, 1023, 2094, 2440
BseRI GAGGAG 3 cut(s) 312, 770, 2454
BseSI GKGCMC 1 cut(s) 1964
BseXI GCAGC 2 cut(s) 430, 1162
BsgI GTGCAG 3 cut(s) 1586, 2393, 2723
Bsh1236I CGCG 1 cut(s) 988
BshFI GGCC 4 cut(s) 366, 558, 1316, 1824
BshNI GGYRCC 1 cut(s) 2375
BsiHKAI GWGCWC 5 cut(s) 749, 1964, 2250, 2291, 2718
BsiHKCI CYCGRG 1 cut(s) 742
BsiSI CCGG 3 cut(s) 1637, 1770, 1910
BslFI GGGAC 1 cut(s) 1752
BslI CCNNNNNNNGG 4 cut(s) 616, 644, 2161, 2468
BsmAI GTCTC 4 cut(s) 447, 745, 2391, 2409
BsmFI GGGAC 1 cut(s) 1752
BsmI GAATGC 1 cut(s) 94
BsnI GGCC 4 cut(s) 366, 558, 1316, 1824
BsoBI CYCGRG 1 cut(s) 742
Bsp1286I GDGCHC 5 cut(s) 749, 1964, 2250, 2291, 2718
Bsp143I GATC 7 cut(s) 175, 496, 777, 1032, 2001, 2397, 2769
Bsp19I CCATGG 1 cut(s) 2371
BspACI CCGC 1 cut(s) 1483
BspANI GGCC 4 cut(s) 366, 558, 1316, 1824
BspCNI CTCAG 5 cut(s) 85, 276, 2277, 2374, 2585
BspFNI CGCG 1 cut(s) 988
BspLI GGNNCC 3 cut(s) 1317, 2168, 2377
BspPI GGATC 2 cut(s) 170, 2405
BspT107I GGYRCC 1 cut(s) 2375
BspTI CTTAAG 1 cut(s) 146
BsrDI GCAATG 3 cut(s) 1485, 1995, 2324
BsrI ACTGG 6 cut(s) 84, 197, 938, 1023, 2094, 2440
BssECI CCNNGG 5 cut(s) 179, 1983, 2170, 2371, 2648
BssMI GATC 7 cut(s) 175, 496, 777, 1032, 2001, 2397, 2769
BssNAI GTATAC 1 cut(s) 1673
BssSI CACGAG 1 cut(s) 1963
BssT1I CCWWGG 5 cut(s) 179, 1983, 2170, 2371, 2648
Bst1107I GTATAC 1 cut(s) 1673
Bst2BI CACGAG 1 cut(s) 1963
Bst4CI ACNGT 3 cut(s) 349, 1762, 2232
Bst6I CTCTTC 1 cut(s) 2625
BstAFI CTTAAG 1 cut(s) 146
BstC8I GCNNGC 3 cut(s) 122, 590, 2085
BstDEI CTNAG 7 cut(s) 93, 263, 1298, 1796, 2285, 2382, 2572
BstDSI CCRYGG 1 cut(s) 2371
BstENI CCTNNNNNAGG 1 cut(s) 642
BstF5I GGATG 8 cut(s) 157, 654, 663, 1237, 1407, 1918, 2514, 2841
BstFNI CGCG 1 cut(s) 988
BstKTI GATC 7 cut(s) 178, 499, 780, 1035, 2004, 2400, 2772
BstMAI GTCTC 4 cut(s) 447, 745, 2391, 2409
BstMBI GATC 7 cut(s) 175, 496, 777, 1032, 2001, 2397, 2769
BstMWI GCNNNNNNNGC 2 cut(s) 31, 683
BstNSI RCATGY 2 cut(s) 460, 1714
BstSCI CCNGG 2 cut(s) 1636, 1768
BstSLI GKGCMC 1 cut(s) 1964
BstUI CGCG 1 cut(s) 988
BstV1I GCAGC 2 cut(s) 430, 1162
BstV2I GAAGAC 3 cut(s) 195, 237, 527
BstX2I RGATCY 1 cut(s) 175
BstXI CCANNNNNNTGG 2 cut(s) 918, 1990
BstYI RGATCY 1 cut(s) 175
BstZ17I GTATAC 1 cut(s) 1673
Bsu36I CCTNAGG 1 cut(s) 1796
BsuRI GGCC 4 cut(s) 366, 558, 1316, 1824
BtgI CCRYGG 1 cut(s) 2371
BtgZI GCGATG 2 cut(s) 1069, 2466
BtrI CACGTC 1 cut(s) 235
BtsCI GGATG 8 cut(s) 157, 654, 663, 1237, 1407, 1918, 2514, 2841
BtsI GCAGTG 2 cut(s) 2723, 2753
BtsIMutI CAGTG 9 cut(s) 252, 345, 1827, 2087, 2379, 2433, 2617, 2723, 2753
Cac8I GCNNGC 3 cut(s) 122, 590, 2085
Cfr13I GGNCC 2 cut(s) 1315, 2152
Csp6I GTAC 4 cut(s) 969, 1728, 2047, 2760
CspCI CAANNNNNGTGG 2 cut(s) 51, 86
CviQI GTAC 4 cut(s) 969, 1728, 2047, 2760
DdeI CTNAG 7 cut(s) 93, 263, 1298, 1796, 2285, 2382, 2572
DpnI GATC 7 cut(s) 177, 498, 779, 1034, 2003, 2399, 2771
DpnII GATC 7 cut(s) 175, 496, 777, 1032, 2001, 2397, 2769
DraI TTTAAA 2 cut(s) 1899, 2281
EaeI YGGCCR 2 cut(s) 364, 556
Eam1104I CTCTTC 1 cut(s) 2625
EarI CTCTTC 1 cut(s) 2625
Ecl136II GAGCTC 3 cut(s) 747, 2289, 2716
Eco130I CCWWGG 5 cut(s) 179, 1983, 2170, 2371, 2648
Eco24I GRGCYC 3 cut(s) 749, 2291, 2718
Eco32I GATATC 1 cut(s) 2140
Eco47I GGWCC 1 cut(s) 2152
Eco53kI GAGCTC 3 cut(s) 747, 2289, 2716
Eco57I CTGAAG 3 cut(s) 981, 2063, 2144
Eco81I CCTNAGG 1 cut(s) 1796
Eco88I CYCGRG 1 cut(s) 742
EcoICRI GAGCTC 3 cut(s) 747, 2289, 2716
EcoNI CCTNNNNNAGG 1 cut(s) 642
EcoRI GAATTC 1 cut(s) 2577
EcoRV GATATC 1 cut(s) 2140
EcoT14I CCWWGG 5 cut(s) 179, 1983, 2170, 2371, 2648
EcoT22I ATGCAT 2 cut(s) 462, 1545
EcoT38I GRGCYC 3 cut(s) 749, 2291, 2718
ErhI CCWWGG 5 cut(s) 179, 1983, 2170, 2371, 2648
FalI AAGNNNNNCTT 4 cut(s) 129, 161, 2641, 2673
FaqI GGGAC 1 cut(s) 1752
FbaI TGATCA 2 cut(s) 496, 2001
FblI GTMKAC 1 cut(s) 1672
Fnu4HI GCNGC 2 cut(s) 444, 1176
FokI GGATG 8 cut(s) 164, 661, 670, 1244, 1414, 1925, 2521, 2828
FriOI GRGCYC 3 cut(s) 749, 2291, 2718
Fsp4HI GCNGC 2 cut(s) 444, 1176
GluI GCNGC 2 cut(s) 444, 1176
GsuI CTGGAG 2 cut(s) 50, 2516
HaeIII GGCC 4 cut(s) 366, 558, 1316, 1824
HapII CCGG 3 cut(s) 1637, 1770, 1910
HincII GTYRAC 1 cut(s) 432
HindII GTYRAC 1 cut(s) 432
HpaI GTTAAC 1 cut(s) 432
HpaII CCGG 3 cut(s) 1637, 1770, 1910
HphI GGTGA 5 cut(s) 85, 1148, 1625, 1652, 2315
Hpy166II GTNNAC 6 cut(s) 432, 477, 1673, 1685, 1962, 2453
Hpy188I TCNGA 5 cut(s) 266, 493, 1286, 2144, 2662
Hpy8I GTNNAC 6 cut(s) 432, 477, 1673, 1685, 1962, 2453
HpyAV CCTTC 9 cut(s) 286, 319, 399, 608, 887, 956, 2294, 2633, 2812
HpyCH4III ACNGT 3 cut(s) 349, 1762, 2232
HpyCH4IV ACGT 4 cut(s) 102, 234, 858, 2850
HpyF10VI GCNNNNNNNGC 2 cut(s) 31, 683
HpyF3I CTNAG 7 cut(s) 93, 263, 1298, 1796, 2285, 2382, 2572
HpySE526I ACGT 4 cut(s) 102, 234, 858, 2850
Ksp22I TGATCA 2 cut(s) 496, 2001
KspAI GTTAAC 1 cut(s) 432
Kzo9I GATC 7 cut(s) 175, 496, 777, 1032, 2001, 2397, 2769
LmnI GCTCC 5 cut(s) 31, 1127, 1630, 2166, 2245
Lsp1109I GCAGC 2 cut(s) 430, 1162
LweI GCATC 5 cut(s) 142, 1092, 1903, 2023, 2197
MaeII ACGT 4 cut(s) 102, 234, 858, 2850
MaeIII GTNAC 9 cut(s) 169, 485, 703, 852, 979, 1404, 1706, 2108, 2851
MalI GATC 7 cut(s) 177, 498, 779, 1034, 2003, 2399, 2771
MboI GATC 7 cut(s) 175, 496, 777, 1032, 2001, 2397, 2769
MfeI CAATTG 3 cut(s) 35, 1776, 2856
MflI RGATCY 1 cut(s) 175
MhlI GDGCHC 5 cut(s) 749, 1964, 2250, 2291, 2718
MlsI TGGCCA 1 cut(s) 366
MluNI TGGCCA 1 cut(s) 366
MlyI GAGTC 7 cut(s) 482, 796, 1480, 1822, 1876, 1975, 2393
MmeI TCCRAC 3 cut(s) 177, 807, 1309
Mox20I TGGCCA 1 cut(s) 366
Mph1103I ATGCAT 2 cut(s) 462, 1545
MroXI GAANNNNTTC 3 cut(s) 306, 1857, 2425
MscI TGGCCA 1 cut(s) 366
MslI CAYNNNNRTG 2 cut(s) 20, 2019
Msp20I TGGCCA 1 cut(s) 366
MspCI CTTAAG 1 cut(s) 146
MspI CCGG 3 cut(s) 1637, 1770, 1910
MspR9I CCNGG 2 cut(s) 1638, 1770
MunI CAATTG 3 cut(s) 35, 1776, 2856
Mva1269I GAATGC 1 cut(s) 94
MvnI CGCG 1 cut(s) 988
MwoI GCNNNNNNNGC 2 cut(s) 31, 683
NciI CCSGG 2 cut(s) 1638, 1770
NcoI CCATGG 1 cut(s) 2371
NdeII GATC 7 cut(s) 175, 496, 777, 1032, 2001, 2397, 2769
NlaIV GGNNCC 3 cut(s) 1317, 2168, 2377
NmeAIII GCCGAG 2 cut(s) 584, 2735
NmuCI GTSAC 7 cut(s) 169, 485, 852, 979, 1404, 2108, 2851
NsiI ATGCAT 2 cut(s) 462, 1545
NspI RCATGY 2 cut(s) 460, 1714
PaeR7I CTCGAG 1 cut(s) 742
PciI ACATGT 1 cut(s) 1710
PcsI WCGNNNNNNNCGW 1 cut(s) 2707
PctI GAATGC 1 cut(s) 94
PdmI GAANNNNTTC 3 cut(s) 306, 1857, 2425
PfeI GAWTC 3 cut(s) 1858, 2145, 2654
PkrI GCNGC 2 cut(s) 445, 1177
PleI GAGTC 7 cut(s) 482, 795, 1479, 1821, 1876, 1974, 2392
PpsI GAGTC 7 cut(s) 482, 795, 1479, 1821, 1876, 1974, 2392
PscI ACATGT 1 cut(s) 1710
PshBI ATTAAT 1 cut(s) 839
Psp124BI GAGCTC 3 cut(s) 749, 2291, 2718
PspN4I GGNNCC 3 cut(s) 1317, 2168, 2377
PspPI GGNCC 2 cut(s) 1315, 2152
PsuI RGATCY 1 cut(s) 175
RsaI GTAC 4 cut(s) 970, 1729, 2048, 2761
RsaNI GTAC 4 cut(s) 969, 1728, 2047, 2760
RseI CAYNNNNRTG 2 cut(s) 20, 2019
SacI GAGCTC 3 cut(s) 749, 2291, 2718
SatI GCNGC 2 cut(s) 444, 1176
Sau3AI GATC 7 cut(s) 175, 496, 777, 1032, 2001, 2397, 2769
Sau96I GGNCC 2 cut(s) 1315, 2152
ScaI AGTACT 1 cut(s) 2048
SchI GAGTC 7 cut(s) 482, 796, 1480, 1822, 1876, 1975, 2393
ScrFI CCNGG 2 cut(s) 1638, 1770
SduI GDGCHC 5 cut(s) 749, 1964, 2250, 2291, 2718
SfaNI GCATC 5 cut(s) 142, 1092, 1903, 2023, 2197
Sfr274I CTCGAG 1 cut(s) 742
SinI GGWCC 1 cut(s) 2152
SlaI CTCGAG 1 cut(s) 742
SmiMI CAYNNNNRTG 2 cut(s) 20, 2019
SmlI CTYRAG 3 cut(s) 146, 742, 1970
SmoI CTYRAG 3 cut(s) 146, 742, 1970
SpeI ACTAGT 1 cut(s) 976
SsiI CCGC 1 cut(s) 1483
SspI AATATT 2 cut(s) 1525, 1723
SstI GAGCTC 3 cut(s) 749, 2291, 2718
StyD4I CCNGG 2 cut(s) 1636, 1768
StyI CCWWGG 5 cut(s) 179, 1983, 2170, 2371, 2648
TaaI ACNGT 3 cut(s) 349, 1762, 2232
TaiI ACGT 4 cut(s) 105, 237, 861, 2853
TaqI TCGA 5 cut(s) 514, 743, 2513, 2622, 2790
TatI WGTACW 2 cut(s) 968, 2046
TfiI GAWTC 3 cut(s) 1858, 2145, 2654
TscAI CASTG 9 cut(s) 259, 352, 1834, 2094, 2386, 2440, 2617, 2730, 2760
TseFI GTSAC 7 cut(s) 169, 485, 852, 979, 1404, 2108, 2851
TseI GCWGC 2 cut(s) 443, 1175
Tsp45I GTSAC 7 cut(s) 169, 485, 852, 979, 1404, 2108, 2851
TspGWI ACGGA 2 cut(s) 10, 917
TspRI CASTG 9 cut(s) 259, 352, 1834, 2094, 2386, 2440, 2617, 2730, 2760
Vha464I CTTAAG 1 cut(s) 146
VneI GTGCAC 1 cut(s) 1960
VpaK11BI GGWCC 1 cut(s) 2152
VspI ATTAAT 1 cut(s) 839
XagI CCTNNNNNAGG 1 cut(s) 642
XapI RAATTY 9 cut(s) 258, 925, 1498, 1807, 2341, 2348, 2490, 2577, 2697
XbaI TCTAGA 1 cut(s) 1936
XceI RCATGY 2 cut(s) 460, 1714
XhoI CTCGAG 1 cut(s) 742
XmaJI CCTAGG 2 cut(s) 179, 2170
XmiI GTMKAC 1 cut(s) 1672
XmnI GAANNNNTTC 3 cut(s) 306, 1857, 2425
ZrmI AGTACT 1 cut(s) 2048
Zsp2I ATGCAT 2 cut(s) 462, 1545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.