Rorug02G0527900

Transmembrane protein 230-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0012474
Physical Location & Seq
Forward (+)
65767507 .. 65770721
3215 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0527900.1

Sequence Viewer

Length: 1605 bp
ATGATCGTGAGCAACAGCGGAGATGGATCAATGGACTTGAACGAGATGGTTGCGGCAGCCCAGTTAGGAGGTGGGGCCCACCAGCTTCATCAGCCCCTGCGGGGGCTGAAGAAGGGGCCGTGGACAGCGGCCGAGGATTCAATTCTGATGGAGTACGTGAAGAAACACGGCGAGGGGAACTGGAACGCCGTGCAGAAGAACTCGGGGCTGGCCAGGTGCGGCAAGAGCTGCAGGCTCCGGTGGGCTAACCATTTGAGGCCTAATCTCAAGAAAGGCTCTCTCACTGCAGAGGAGGAGCGAATGATCATCGAACTTCATGCCAAGTACGGCAACAAATGGGCTCGCATGGCTTCTCAGTTACCCGGTAGGACTGACAACGAGATAAAGAACTACTGGAACACAAGAATGAAGAGACGCCAGAGAGCCGGATTACCAATTTACCCTCACGAGCTTCAACATGAAGTCGCTGCTTCATTTCACCACCAACAAGCTCATCAGCAGCAGCAGAGGCATAACTCAAACTCGTCCTCTTCTTCATTTTCATCGCTCCTTTCCTCCTCGCATCCTCGAAAAGCAAATTACAGCTCTACCCCATCGCTCTCTCTTTATGACCACATCAGTTTTGATGCCTCTCTGCCGAACCACCACAACTCTCCTTCTCTTAATTACTCCAACTCCGCCATGATGACCCAGTTCAACGGTAACAGTGGCTTTACTATCCCGCTATCTCCGGTTTCACCGGTTTCCCCATTTGGGTCATCGTCTTCAGCACTGTTCAACCAGACCAATATTCCAAACCAAACCCTTCTGCCAACTCCATCTCAATACTACAACTCAGGTCATGGAGGTTTTGGCAATTACAGTACTCTTAGCCTTGGCTCGATGATCATGGGGACTCCTACTTATGAGCCAATGAACTCAGAGCTCCCTTCGAACCAAACACCACCATACTCACCATACACCCCCACGAAACCTGCTTCTTCTGCTAACTTTAATGGCGGTGAGGGTCTGATGGAGGCTTCCGGCAACACCAATGGCTATGAGATTGAAACGGTAACCTCTCAAGGAAAGAGAGGCAGTGGTCTGCTGGATGATGTGTTGGTGCAAGCTGATGTAATTTGTGGGAACAAGAGATCAAGGAGTGGAGACAGCTCATCCGGCCAGTCAGGGAAAGACAAATATATAGTGGAGGAGGAGGATGAGTCTGCTGGTCAGGAAGAGGAAGAAGACAATGTGCAAGAGGAATCAACTTGGAAGAGCAGCGGTGACAATAGTGCTGAAAACCTAAGGGAAGGTAGCTCTTCTCCGTCAGTTGGGATGAAACCAAGTGAGGATCCACTAGAGGATATGGACGATGACTTGTTAAGCCTGCTCAACTTCCAATCTGCAGCGCCAGAATCCGAGTCGTGGTACGGGGGAAGCATTTCTGACCAGGCATCACCAGGCATGAATGGTGCAGGTGACAATAATAATGTGAGTCTAGACATTCGGCAAAACACATCGACATATGCATCCACGGTGAACATGAGTGCAGCAGAACCTGATGATGAAGTTAAGCGCAGCCTTCCTCCATGCTTCTGGAACAACATGCCTGGCATCTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF872

Protein Analysis

534

Amino Acids

57.99

Weight (kDa)

5.35

Isoelectric Point (pI)

55.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 38 - 85 1.5e-15 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 41 - 101 7.9e-12 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 91 - 134 1.4e-15 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 95 - 138 2.5e-07 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012474)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29170 AT3G29170
fragaria_vesca FvH4_6g47840
malus_domestica MD09G1056300.v1.1 MD17G1053800.v1.1
prunus_persica Prupe.3G262800_v2.0.a1
pyrus_communis pycom111g04710 pycom17g05150
rosa_chinensis RchiOBHm_Chr2g0167041
rosa_laevigata RLG00000021691
rosa_multiflora Rmu_sc0010966.1_g000012
rosa_roxburghii Rroxscaffold_2G00083780
rosa_rugosa Rorug02G0527900 Rorug02G0527900
rosa_samantha Rh2AG594800 Rh2BG606100 Rh2CG576900 Rh2DG617600
rosa_wichuraiana Rw2G049510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1448
Acc36I ACCTGC 2 cut(s) 982, 1448
AciI CCGC 9 cut(s) 18, 53, 100, 128, 219, 678, 722, 999, 1263
AclWI GGATC 3 cut(s) 34, 1328, 1341
AcoI YGGCCR 3 cut(s) 129, 210, 1159
AcuI CTGAAG 2 cut(s) 128, 750
AcyI GRCGYC 1 cut(s) 415
AfaI GTAC 4 cut(s) 155, 326, 865, 1412
AfiI CCNNNNNNNGG 5 cut(s) 101, 102, 753, 1313, 1407
AgeI ACCGGT 1 cut(s) 739
AgsI TTSAA 6 cut(s) 40, 141, 455, 697, 778, 1049
AjnI CCWGG 4 cut(s) 212, 1431, 1441, 1591
AluBI AGCT 9 cut(s) 85, 228, 451, 491, 585, 925, 1109, 1152, 1299
AluI AGCT 9 cut(s) 85, 228, 451, 491, 585, 925, 1109, 1152, 1299
Alw21I GWGCWC 1 cut(s) 927
Alw26I GTCTC 2 cut(s) 406, 1140
AlwI GGATC 3 cut(s) 34, 1328, 1341
AlwNI CAGNNNCTG 2 cut(s) 97, 1541
Ama87I CYCGRG 1 cut(s) 202
AoxI GGCC 6 cut(s) 75, 116, 129, 210, 257, 1159
ApaI GGGCCC 1 cut(s) 79
ApeKI GCWGC 9 cut(s) 56, 228, 467, 499, 502, 1260, 1388, 1532, 1560
AsiGI ACCGGT 1 cut(s) 739
Asp700I GAANNNNTTC 1 cut(s) 1423
AspLEI GCGC 2 cut(s) 1393, 1560
AspS9I GGNCC 3 cut(s) 75, 76, 116
AsuC2I CCSGG 1 cut(s) 363
AsuHPI GGTGA 8 cut(s) 470, 729, 945, 1013, 1277, 1431, 1472, 1531
AsuII TTCGAA 1 cut(s) 932
AvaI CYCGRG 1 cut(s) 202
AxyI CCTNAGG 1 cut(s) 1286
BaeGI GKGCMC 1 cut(s) 79
BalI TGGCCA 1 cut(s) 212
BamHI GGATCC 1 cut(s) 1333
BanII GRGCYC 3 cut(s) 79, 343, 927
BauI CACGAG 1 cut(s) 446
BbsI GAAGAC 2 cut(s) 756, 1233
Bbv12I GWGCWC 1 cut(s) 927
BbvI GCAGC 9 cut(s) 68, 215, 454, 511, 514, 1272, 1400, 1544, 1572
BccI CCATC 6 cut(s) 17, 40, 142, 601, 826, 1006
BceAI ACGGC 4 cut(s) 103, 173, 184, 343
BcgI CGANNNNNNTGC 4 cut(s) 32, 66, 299, 333
BciT130I CCWGG 4 cut(s) 214, 1433, 1443, 1593
BclI TGATCA 2 cut(s) 303, 885
BcnI CCSGG 1 cut(s) 363
BcoDI GTCTC 2 cut(s) 406, 1140
BfaI CTAG 2 cut(s) 1340, 1481
BfmI CTRYAG 3 cut(s) 229, 285, 1386
BfoI RGCGCY 1 cut(s) 1394
BfuAI ACCTGC 2 cut(s) 982, 1448
BmcAI AGTACT 1 cut(s) 865
Bme1390I CCNGG 5 cut(s) 214, 363, 1433, 1443, 1593
BmeT110I CYCGRG 1 cut(s) 202
BmgT120I GGNCC 3 cut(s) 75, 76, 116
BmiI GGNNCC 5 cut(s) 76, 77, 117, 236, 1335
BmrFI CCNGG 5 cut(s) 214, 363, 1433, 1443, 1593
BmrI ACTGGG 2 cut(s) 55, 685
BmsI GCATC 4 cut(s) 571, 616, 1445, 1520
BmuI ACTGGG 2 cut(s) 55, 685
BpiI GAAGAC 2 cut(s) 756, 1233
Bpu14I TTCGAA 1 cut(s) 932
BpuEI CTTGAG 2 cut(s) 251, 1047
BpuMI CCSGG 1 cut(s) 363
BsaAI YACGTR 1 cut(s) 157
BsaHI GRCGYC 1 cut(s) 415
BsaJI CCNNGG 4 cut(s) 119, 132, 874, 1515
BsaWI WCCGGW 3 cut(s) 237, 730, 739
BsaXI ACNNNNNCTCC 4 cut(s) 659, 689, 1187, 1217
Bsc4I CCNNNNNNNGG 5 cut(s) 101, 102, 753, 1313, 1407
Bse118I RCCGGY 1 cut(s) 739
Bse1I ACTGG 5 cut(s) 61, 185, 398, 691, 1162
Bse21I CCTNAGG 1 cut(s) 1286
BseBI CCWGG 4 cut(s) 214, 1433, 1443, 1593
BseDI CCNNGG 4 cut(s) 119, 132, 874, 1515
BseGI GGATG 6 cut(s) 562, 1096, 1154, 1204, 1323, 1511
BseLI CCNNNNNNNGG 5 cut(s) 101, 102, 753, 1313, 1407
BseMII CTCAG 3 cut(s) 368, 849, 933
BseNI ACTGG 5 cut(s) 61, 185, 398, 691, 1162
BseRI GAGGAG 5 cut(s) 305, 308, 547, 1205, 1208
BseSI GKGCMC 1 cut(s) 79
BseX3I CGGCCG 1 cut(s) 129
BseXI GCAGC 9 cut(s) 68, 215, 454, 511, 514, 1272, 1400, 1544, 1572
BsgI GTGCAG 3 cut(s) 212, 1476, 1551
Bsh1285I CGRYCG 1 cut(s) 132
BshFI GGCC 6 cut(s) 77, 118, 131, 212, 259, 1161
BshTI ACCGGT 1 cut(s) 739
BsiEI CGRYCG 1 cut(s) 132
BsiHKAI GWGCWC 1 cut(s) 927
BsiHKCI CYCGRG 1 cut(s) 202
BsiSI CCGG 7 cut(s) 238, 363, 426, 731, 740, 1023, 1158
BslFI GGGAC 1 cut(s) 907
BslI CCNNNNNNNGG 5 cut(s) 101, 102, 753, 1313, 1407
BsmAI GTCTC 2 cut(s) 406, 1140
BsmBI CGTCTC 1 cut(s) 406
BsmFI GGGAC 1 cut(s) 907
BsnI GGCC 6 cut(s) 77, 118, 131, 212, 259, 1161
BsoBI CYCGRG 1 cut(s) 202
Bsp119I TTCGAA 1 cut(s) 932
Bsp120I GGGCCC 1 cut(s) 75
Bsp1286I GDGCHC 3 cut(s) 79, 343, 927
Bsp143I GATC 6 cut(s) 3, 26, 303, 885, 1133, 1333
BspACI CCGC 9 cut(s) 18, 53, 100, 128, 219, 678, 722, 999, 1263
BspANI GGCC 6 cut(s) 77, 118, 131, 212, 259, 1161
BspCNI CTCAG 3 cut(s) 367, 848, 932
BspLI GGNNCC 5 cut(s) 76, 77, 117, 236, 1335
BspMAI CTGCAG 3 cut(s) 233, 289, 1390
BspMI ACCTGC 2 cut(s) 982, 1448
BspPI GGATC 3 cut(s) 34, 1328, 1341
BspQI GCTCTTC 2 cut(s) 1250, 1306
BspT104I TTCGAA 1 cut(s) 932
BsrFI RCCGGY 1 cut(s) 739
BsrI ACTGG 5 cut(s) 61, 185, 398, 691, 1162
BssAI RCCGGY 1 cut(s) 739
BssECI CCNNGG 4 cut(s) 119, 132, 874, 1515
BssMI GATC 6 cut(s) 3, 26, 303, 885, 1133, 1333
BssNI GRCGYC 1 cut(s) 415
BssSI CACGAG 1 cut(s) 446
BssT1I CCWWGG 1 cut(s) 874
Bst2BI CACGAG 1 cut(s) 446
Bst2UI CCWGG 4 cut(s) 214, 1433, 1443, 1593
Bst4CI ACNGT 6 cut(s) 701, 707, 774, 863, 1054, 1519
Bst6I CTCTTC 5 cut(s) 404, 535, 1212, 1250, 1306
BstACI GRCGYC 1 cut(s) 415
BstAPI GCANNNNNTGC 1 cut(s) 228
BstBAI YACGTR 1 cut(s) 157
BstBI TTCGAA 1 cut(s) 932
BstC8I GCNNGC 5 cut(s) 210, 233, 343, 1107, 1370
BstDEI CTNAG 5 cut(s) 354, 835, 869, 919, 1286
BstDSI CCRYGG 2 cut(s) 119, 1515
BstEII GGTNACC 1 cut(s) 1054
BstF5I GGATG 6 cut(s) 562, 1096, 1154, 1204, 1323, 1511
BstH2I RGCGCY 1 cut(s) 1394
BstHHI GCGC 2 cut(s) 1393, 1560
BstKTI GATC 6 cut(s) 6, 29, 306, 888, 1136, 1336
BstMAI GTCTC 2 cut(s) 406, 1140
BstMBI GATC 6 cut(s) 3, 26, 303, 885, 1133, 1333
BstMCI CGRYCG 1 cut(s) 132
BstMWI GCNNNNNNNGC 7 cut(s) 91, 225, 228, 347, 508, 983, 1158
BstNI CCWGG 4 cut(s) 214, 1433, 1443, 1593
BstNSI RCATGY 1 cut(s) 1591
BstPI GGTNACC 1 cut(s) 1054
BstSCI CCNGG 5 cut(s) 212, 361, 1431, 1441, 1591
BstSFI CTRYAG 3 cut(s) 229, 285, 1386
BstSLI GKGCMC 1 cut(s) 79
BstV1I GCAGC 9 cut(s) 68, 215, 454, 511, 514, 1272, 1400, 1544, 1572
BstV2I GAAGAC 2 cut(s) 756, 1233
BstX2I RGATCY 1 cut(s) 1333
BstXI CCANNNNNNTGG 1 cut(s) 1578
BstYI RGATCY 1 cut(s) 1333
BstZI CGGCCG 1 cut(s) 129
Bsu36I CCTNAGG 1 cut(s) 1286
BsuRI GGCC 6 cut(s) 77, 118, 131, 212, 259, 1161
BtgI CCRYGG 2 cut(s) 119, 1515
BtgZI GCGATG 2 cut(s) 528, 579
BtsCI GGATG 6 cut(s) 562, 1096, 1154, 1204, 1323, 1511
BtsI GCAGTG 2 cut(s) 282, 1084
BtsIMutI CAGTG 4 cut(s) 282, 712, 770, 1084
BveI ACCTGC 2 cut(s) 982, 1448
Cac8I GCNNGC 5 cut(s) 210, 233, 343, 1107, 1370
CaiI CAGNNNCTG 2 cut(s) 97, 1541
CfoI GCGC 2 cut(s) 1393, 1560
Cfr10I RCCGGY 1 cut(s) 739
Cfr13I GGNCC 3 cut(s) 75, 76, 116
CseI GACGC 1 cut(s) 423
Csp6I GTAC 4 cut(s) 154, 325, 864, 1411
CspAI ACCGGT 1 cut(s) 739
CviQI GTAC 4 cut(s) 154, 325, 864, 1411
DdeI CTNAG 5 cut(s) 354, 835, 869, 919, 1286
DpnI GATC 6 cut(s) 5, 28, 305, 887, 1135, 1335
DpnII GATC 6 cut(s) 3, 26, 303, 885, 1133, 1333
EaeI YGGCCR 3 cut(s) 129, 210, 1159
EagI CGGCCG 1 cut(s) 129
Eam1104I CTCTTC 5 cut(s) 404, 535, 1212, 1250, 1306
EarI CTCTTC 5 cut(s) 404, 535, 1212, 1250, 1306
EciI GGCGGA 1 cut(s) 667
Ecl136II GAGCTC 1 cut(s) 925
EclXI CGGCCG 1 cut(s) 129
Eco130I CCWWGG 1 cut(s) 874
Eco147I AGGCCT 1 cut(s) 259
Eco24I GRGCYC 3 cut(s) 79, 343, 927
Eco52I CGGCCG 1 cut(s) 129
Eco53kI GAGCTC 1 cut(s) 925
Eco57I CTGAAG 2 cut(s) 128, 750
Eco81I CCTNAGG 1 cut(s) 1286
Eco88I CYCGRG 1 cut(s) 202
Eco91I GGTNACC 1 cut(s) 1054
EcoICRI GAGCTC 1 cut(s) 925
EcoO109I RGGNCCY 1 cut(s) 75
EcoO65I GGTNACC 1 cut(s) 1054
EcoRII CCWGG 4 cut(s) 212, 1431, 1441, 1591
EcoT14I CCWWGG 1 cut(s) 874
EcoT22I ATGCAT 1 cut(s) 1513
EcoT38I GRGCYC 3 cut(s) 79, 343, 927
ErhI CCWWGG 1 cut(s) 874
Esp3I CGTCTC 1 cut(s) 406
FaqI GGGAC 1 cut(s) 907
FauI CCCGC 2 cut(s) 93, 729
FauNDI CATATG 1 cut(s) 1507
FbaI TGATCA 2 cut(s) 303, 885
FokI GGATG 6 cut(s) 549, 1103, 1141, 1211, 1330, 1498
FriOI GRGCYC 3 cut(s) 79, 343, 927
FspBI CTAG 2 cut(s) 1340, 1481
GlaI GCGC 2 cut(s) 1392, 1559
HaeII RGCGCY 1 cut(s) 1394
HaeIII GGCC 6 cut(s) 77, 118, 131, 212, 259, 1161
HapII CCGG 7 cut(s) 238, 363, 426, 731, 740, 1023, 1158
HgaI GACGC 1 cut(s) 423
HhaI GCGC 2 cut(s) 1393, 1560
Hin1I GRCGYC 1 cut(s) 415
Hin6I GCGC 2 cut(s) 1391, 1558
HinP1I GCGC 2 cut(s) 1391, 1558
HinfI GANTC 7 cut(s) 137, 895, 1202, 1244, 1397, 1403, 1477
HpaII CCGG 7 cut(s) 238, 363, 426, 731, 740, 1023, 1158
HphI GGTGA 8 cut(s) 470, 729, 945, 1013, 1277, 1431, 1472, 1531
Hpy166II GTNNAC 2 cut(s) 123, 1522
Hpy188I TCNGA 5 cut(s) 147, 922, 1011, 1402, 1429
Hpy188III TCNNGA 6 cut(s) 7, 268, 446, 1214, 1481, 1579
Hpy8I GTNNAC 2 cut(s) 123, 1522
HpyAV CCTTC 6 cut(s) 106, 666, 815, 939, 1286, 1574
HpyCH4III ACNGT 6 cut(s) 701, 707, 774, 863, 1054, 1519
HpyCH4IV ACGT 1 cut(s) 156
HpyCH4V TGCA 9 cut(s) 193, 231, 287, 1105, 1237, 1388, 1457, 1511, 1532
HpyF10VI GCNNNNNNNGC 7 cut(s) 91, 225, 228, 347, 508, 983, 1158
HpyF3I CTNAG 5 cut(s) 354, 835, 869, 919, 1286
HpySE526I ACGT 1 cut(s) 156
Hsp92I GRCGYC 1 cut(s) 415
HspAI GCGC 2 cut(s) 1391, 1558
Ksp22I TGATCA 2 cut(s) 303, 885
Kzo9I GATC 6 cut(s) 3, 26, 303, 885, 1133, 1333
LguI GCTCTTC 2 cut(s) 1250, 1306
LmnI GCTCC 4 cut(s) 240, 295, 552, 930
Lsp1109I GCAGC 9 cut(s) 68, 215, 454, 511, 514, 1272, 1400, 1544, 1572
LweI GCATC 4 cut(s) 571, 616, 1445, 1520
MaeI CTAG 2 cut(s) 1340, 1481
MaeII ACGT 1 cut(s) 156
MaeIII GTNAC 5 cut(s) 357, 701, 1054, 1265, 1460
MalI GATC 6 cut(s) 5, 28, 305, 887, 1135, 1335
MboI GATC 6 cut(s) 3, 26, 303, 885, 1133, 1333
MflI RGATCY 1 cut(s) 1333
MhlI GDGCHC 3 cut(s) 79, 343, 927
MlsI TGGCCA 1 cut(s) 212
MluCI AATT 6 cut(s) 141, 435, 577, 664, 856, 1116
MluNI TGGCCA 1 cut(s) 212
MlyI GAGTC 4 cut(s) 889, 1211, 1412, 1486
MmeI TCCRAC 1 cut(s) 696
Mox20I TGGCCA 1 cut(s) 212
Mph1103I ATGCAT 1 cut(s) 1513
MroXI GAANNNNTTC 1 cut(s) 1423
MscI TGGCCA 1 cut(s) 212
MseI TTAA 4 cut(s) 663, 993, 1364, 1554
MslI CAYNNNNRTG 1 cut(s) 404
Msp20I TGGCCA 1 cut(s) 212
MspA1I CMGCKG 3 cut(s) 18, 128, 1263
MspI CCGG 7 cut(s) 238, 363, 426, 731, 740, 1023, 1158
MspR9I CCNGG 5 cut(s) 214, 363, 1433, 1443, 1593
MvaI CCWGG 4 cut(s) 214, 1433, 1443, 1593
MwoI GCNNNNNNNGC 7 cut(s) 91, 225, 228, 347, 508, 983, 1158
NciI CCSGG 1 cut(s) 363
NdeI CATATG 1 cut(s) 1507
NdeII GATC 6 cut(s) 3, 26, 303, 885, 1133, 1333
NlaIV GGNNCC 5 cut(s) 76, 77, 117, 236, 1335
NmeAIII GCCGAG 1 cut(s) 157
NmuCI GTSAC 2 cut(s) 1265, 1460
NsiI ATGCAT 1 cut(s) 1513
NspI RCATGY 1 cut(s) 1591
NspV TTCGAA 1 cut(s) 932
PaqCI CACCTGC 1 cut(s) 1448
PceI AGGCCT 1 cut(s) 259
PciSI GCTCTTC 2 cut(s) 1250, 1306
PdmI GAANNNNTTC 1 cut(s) 1423
PfeI GAWTC 3 cut(s) 137, 1244, 1397
PinAI ACCGGT 1 cut(s) 739
PleI GAGTC 4 cut(s) 889, 1210, 1411, 1485
PpsI GAGTC 4 cut(s) 889, 1210, 1411, 1485
Ppu21I YACGTR 1 cut(s) 157
Psp124BI GAGCTC 1 cut(s) 927
Psp6I CCWGG 4 cut(s) 212, 1431, 1441, 1591
PspEI GGTNACC 1 cut(s) 1054
PspGI CCWGG 4 cut(s) 212, 1431, 1441, 1591
PspN4I GGNNCC 5 cut(s) 76, 77, 117, 236, 1335
PspOMI GGGCCC 1 cut(s) 75
PspPI GGNCC 3 cut(s) 75, 76, 116
PstI CTGCAG 3 cut(s) 233, 289, 1390
PstNI CAGNNNCTG 2 cut(s) 97, 1541
PsuI RGATCY 1 cut(s) 1333
RsaI GTAC 4 cut(s) 155, 326, 865, 1412
RsaNI GTAC 4 cut(s) 154, 325, 864, 1411
RseI CAYNNNNRTG 1 cut(s) 404
SacI GAGCTC 1 cut(s) 927
SapI GCTCTTC 2 cut(s) 1250, 1306
SaqAI TTAA 4 cut(s) 663, 993, 1364, 1554
Sau3AI GATC 6 cut(s) 3, 26, 303, 885, 1133, 1333
Sau96I GGNCC 3 cut(s) 75, 76, 116
ScaI AGTACT 1 cut(s) 865
SchI GAGTC 4 cut(s) 889, 1211, 1412, 1486
ScrFI CCNGG 5 cut(s) 214, 363, 1433, 1443, 1593
SduI GDGCHC 3 cut(s) 79, 343, 927
SfaNI GCATC 4 cut(s) 571, 616, 1445, 1520
SfcI CTRYAG 3 cut(s) 229, 285, 1386
SfuI TTCGAA 1 cut(s) 932
SmiMI CAYNNNNRTG 1 cut(s) 404
SmlI CTYRAG 2 cut(s) 266, 1062
SmoI CTYRAG 2 cut(s) 266, 1062
Sse9I AATT 6 cut(s) 141, 435, 577, 664, 856, 1116
SseBI AGGCCT 1 cut(s) 259
SsiI CCGC 9 cut(s) 18, 53, 100, 128, 219, 678, 722, 999, 1263
SspI AATATT 1 cut(s) 790
SspMI CTAG 2 cut(s) 1340, 1481
SstI GAGCTC 1 cut(s) 927
StuI AGGCCT 1 cut(s) 259
StyD4I CCNGG 5 cut(s) 212, 361, 1431, 1441, 1591
StyI CCWWGG 1 cut(s) 874
TaaI ACNGT 6 cut(s) 701, 707, 774, 863, 1054, 1519
TaiI ACGT 1 cut(s) 159
TaqI TCGA 5 cut(s) 309, 568, 881, 932, 1502
TasI AATT 6 cut(s) 141, 435, 577, 664, 856, 1116
TatI WGTACW 1 cut(s) 863
TauI GCSGC 3 cut(s) 56, 131, 222
TfiI GAWTC 3 cut(s) 137, 1244, 1397
Tru1I TTAA 4 cut(s) 663, 993, 1364, 1554
Tru9I TTAA 4 cut(s) 663, 993, 1364, 1554
TscAI CASTG 4 cut(s) 289, 712, 777, 1084
TseFI GTSAC 2 cut(s) 1265, 1460
TseI GCWGC 9 cut(s) 56, 228, 467, 499, 502, 1260, 1388, 1532, 1560
Tsp45I GTSAC 2 cut(s) 1265, 1460
TspGWI ACGGA 1 cut(s) 1296
TspRI CASTG 4 cut(s) 289, 712, 777, 1084
XbaI TCTAGA 1 cut(s) 1480
XceI RCATGY 1 cut(s) 1591
XcmI CCANNNNNNNNNTGG 1 cut(s) 68
XmnI GAANNNNTTC 1 cut(s) 1423
XspI CTAG 2 cut(s) 1340, 1481
ZrmI AGTACT 1 cut(s) 865
Zsp2I ATGCAT 1 cut(s) 1513
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.