Rorug02G0542400
NAC Family

inactive receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
67194209 .. 67194811
603 bp
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UTR
Exon/CDS
Intron
Rorug02G0542400.1

Sequence Viewer

Length: 285 bp
ATGCATTTCAACATGCAGATAAAGAAGAAGAAAAACGTGGCCAAGGCTAGCTTGATTCTTGTTGTTTCTCTTCTTGTCATCATTTCCCTAGCTGAGATTGGGTTTAAAGATGACAATTCAGCGATAGTGTGCAATTCGGTTTATGGTGCAGAGGCTGGTGATACTTGCAGTAGCGTCATTCAAAAGTTCGAACTGAGTATCCAGTTCTTCCTTTCCATCAATCCTAATATCAATTACGACAGCTTCTTCGTGGGTCAATGGCTTTGTACTGATGGGACTGCATAG

Protein Analysis

94

Amino Acids

10.32

Weight (kDa)

5.61

Isoelectric Point (pI)

23.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012859)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 39
AfaI GTAC 1 cut(s) 268
AgsI TTSAA 2 cut(s) 10, 182
AloI GAACNNNNNNTCC 2 cut(s) 183, 215
AluBI AGCT 3 cut(s) 51, 92, 243
AluI AGCT 3 cut(s) 51, 92, 243
AlwNI CAGNNNCTG 1 cut(s) 155
AoxI GGCC 1 cut(s) 39
ArsI GACNNNNNNTTYG 2 cut(s) 230, 262
AsuHPI GGTGA 1 cut(s) 170
AsuII TTCGAA 1 cut(s) 189
AsuNHI GCTAGC 1 cut(s) 47
BalI TGGCCA 1 cut(s) 41
BccI CCATC 2 cut(s) 224, 266
BciVI GTATCC 1 cut(s) 209
BfaI CTAG 2 cut(s) 48, 89
BfuI GTATCC 1 cut(s) 209
BmtI GCTAGC 1 cut(s) 51
Bpu14I TTCGAA 1 cut(s) 189
BsaJI CCNNGG 1 cut(s) 42
Bse1I ACTGG 1 cut(s) 202
BseDI CCNNGG 1 cut(s) 42
BseMII CTCAG 2 cut(s) 84, 185
BseNI ACTGG 1 cut(s) 202
BsgI GTGCAG 1 cut(s) 168
BshFI GGCC 1 cut(s) 41
BsnI GGCC 1 cut(s) 41
Bsp119I TTCGAA 1 cut(s) 189
BspANI GGCC 1 cut(s) 41
BspCNI CTCAG 2 cut(s) 85, 186
BspOI GCTAGC 1 cut(s) 51
BspT104I TTCGAA 1 cut(s) 189
BsrI ACTGG 1 cut(s) 202
BssECI CCNNGG 1 cut(s) 42
BssT1I CCWWGG 1 cut(s) 42
Bst6I CTCTTC 1 cut(s) 75
BstBI TTCGAA 1 cut(s) 189
BstC8I GCNNGC 1 cut(s) 49
BstDEI CTNAG 2 cut(s) 93, 194
BstNSI RCATGY 1 cut(s) 16
BsuI GTATCC 1 cut(s) 209
BsuRI GGCC 1 cut(s) 41
Cac8I GCNNGC 1 cut(s) 49
CaiI CAGNNNCTG 1 cut(s) 155
CseI GACGC 1 cut(s) 163
Csp6I GTAC 1 cut(s) 267
CviAII CATG 1 cut(s) 13
CviJI RGCY 7 cut(s) 41, 47, 51, 92, 155, 243, 262
CviKI_1 RGCY 7 cut(s) 41, 47, 51, 92, 155, 243, 262
CviQI GTAC 1 cut(s) 267
DdeI CTNAG 2 cut(s) 93, 194
DraI TTTAAA 1 cut(s) 106
EaeI YGGCCR 1 cut(s) 39
Eam1104I CTCTTC 1 cut(s) 75
EarI CTCTTC 1 cut(s) 75
Eco130I CCWWGG 1 cut(s) 42
EcoT14I CCWWGG 1 cut(s) 42
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 42
FaeI CATG 1 cut(s) 16
FaiI YATR 3 cut(s) 14, 144, 283
FalI AAGNNNNNCTT 2 cut(s) 35, 67
FatI CATG 1 cut(s) 12
FspBI CTAG 2 cut(s) 48, 89
HaeIII GGCC 1 cut(s) 41
HgaI GACGC 1 cut(s) 163
Hin1II CATG 1 cut(s) 16
HinfI GANTC 1 cut(s) 55
HphI GGTGA 1 cut(s) 170
HpyCH4IV ACGT 1 cut(s) 36
HpyCH4V TGCA 6 cut(s) 4, 16, 132, 149, 168, 281
HpyF3I CTNAG 2 cut(s) 93, 194
HpySE526I ACGT 1 cut(s) 36
Hsp92II CATG 1 cut(s) 16
LpnPI CCDG 2 cut(s) 141, 215
MaeI CTAG 2 cut(s) 48, 89
MaeII ACGT 1 cut(s) 36
MboII GAAGA 5 cut(s) 37, 40, 62, 199, 238
MlsI TGGCCA 1 cut(s) 41
MluCI AATT 3 cut(s) 115, 133, 232
MluNI TGGCCA 1 cut(s) 41
MnlI CCTC 1 cut(s) 145
Mox20I TGGCCA 1 cut(s) 41
Mph1103I ATGCAT 1 cut(s) 6
MscI TGGCCA 1 cut(s) 41
MseI TTAA 1 cut(s) 105
Msp20I TGGCCA 1 cut(s) 41
NheI GCTAGC 1 cut(s) 47
NlaIII CATG 1 cut(s) 16
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 16
NspV TTCGAA 1 cut(s) 189
PfeI GAWTC 1 cut(s) 55
PstNI CAGNNNCTG 1 cut(s) 155
RsaI GTAC 1 cut(s) 268
RsaNI GTAC 1 cut(s) 267
SaqAI TTAA 1 cut(s) 105
SetI ASST 4 cut(s) 39, 53, 94, 245
SfuI TTCGAA 1 cut(s) 189
Sse9I AATT 3 cut(s) 115, 133, 232
SspMI CTAG 2 cut(s) 48, 89
StyI CCWWGG 1 cut(s) 42
TaiI ACGT 1 cut(s) 39
TaqI TCGA 1 cut(s) 189
TasI AATT 3 cut(s) 115, 133, 232
TatI WGTACW 1 cut(s) 266
TfiI GAWTC 1 cut(s) 55
Tru1I TTAA 1 cut(s) 105
Tru9I TTAA 1 cut(s) 105
XceI RCATGY 1 cut(s) 16
XspI CTAG 2 cut(s) 48, 89
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.