Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0012859

Physical Location & Seq

Genomic Coordinates Reverse (-)

78649204 .. 78651605

Gene Structure 2402 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G050960.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGCTGAGCTCAAGTGCGACCTGGGTTTTGACCCTCCTGTTGTTCTTGGGCTGCTTTTCTGGCTATGGAGCTATTGTTGAAGACGACGTCAAGTGTCTCAAGGGACTCCAACAAGCTTTCAAAGACCCAGATGACAAGCTCGCCTCTTGGGACTTCAACAACGCCTCTGTGGGCTTCATCTGCCACTTTGTGGGTGTCTCTTGCTGGAACGACCGCGAGAATCGAATCTACAACCTTGAGCTGAGGGACATGTCTCTGTCGGGCACGATTCCCAAGTCGCTTGAGTACTGCATTAGTTTGCAGAATCTGGATCTAGCAGGTAACCATCTTACTGGTCTGATCCCTAATGATCTGTGTGCTTGGTTGCCGTACATGGTTACTTTGGATTTGTCCGGTAATGGATTCACGGGTCCAATCCCGGCTGATTTGCAAAAGTGTACTTTCTTGAACGGTCTGATCCTTTCGGATAATAAGCTTACGGGTGGTGTTCCTTATGAGTTTTCTAGCTTTACCAGGCTCAAGAAGTTTTCTGTGGCGAACAATCAGTTGAGTGGGACTATACCACAGTTTTTTCAGCGTTTTGATAAGGCTGATTTTGCCGGGAATAGCGGGCTGTGTGGAGGGCCGCTTAAGAAGTGTGGTGGATTGAGTAAGAAGAATCTTGCTATTATAATTGCTGCTGGGGTGTTTGGCGCCGCGGCGTCTTTGTTGTTGGCTTTGGGCTTGTGGTGGTGGTACCATTTGAGGCTGAGCAAGAAGAGGAAGGGAGGGTTTGGTGTTGGGAGAGAGGATTGGGCGGAGAGGTTGAGGGCTCATAGGCTGGTGCAAGTTTCCTTGTTTCAGAAACCGCTTGTCAAAGTTAAGTTGGCGGATTTGATGGCCGCTACGAATAATTTCAGCCAGGAAAATGTGATCATTTCGACTAGGACTGGGACTACTTACAAGGCTCTACTGCCTGATGGGTCGGCGCTGGCAATTAAGCGGCTCAGTACTTGTAAACTTGGGGAGAAGCAGTTTCGGTTGGAGATGAACCGGTTAGGACAGCTAAGGCATCCGAATTTGGCACCCCTTTTGGGGTTCTGTGTTGTGGAGGAGGAAAAGCTTCTGGTCTATAAGTACTTGTCGAATGGGACTTTGTATTCTTTGTTACATGGAAGTGGCCCTGGATTGGATTGGCCAACTAGATATAGGATTGGTTTGGGTGCTGCAAGGGGACTTGCTTGGCTTCACCATGGTTGCCAGCCTCCAATCATACACCAAAACATCTGCTCCAATGTGATTCTCCTTGATGAGGATTTTGATGCTAGGATAATGGACTTTGGGTTGGCAAAGCTTATGACGTCTGATTCTCATGATAGCAGTTTCGTTAATGGAGACTTGGGAGAGCTTGGTTATATAGCTCCTGAGTATCCAAGTACTATGGTAGCTTCACTGAAAGGGGACGTTTATGGATTTGGCATAGTACTTCTGGAGTTGGCGACTGGGCAAAAGCCTCTTGAAGTCGGCACTGCTGAAGAAGGTTTTAAGGGTAATGTTGTTGATTGGGTGAATCATCTCTCAAGTTCTGGTCAAAACAAGGATGCCATTGATAAGGATATCTCTGGAAAAGGACACGATGATGAAATTCTACAATTTCTGAAAATTGCTTGTAATTGTGTTGTTTCCCGACCCAAGGATAGGTGGTCTATGTACCAGGTTTACCACTCATTGAAGAGTATGCGCAGAGACCATAGTTTCTCTGAACAAGATGATGAGTTTCCTTTGATTTTTCGCAAGCCAGATAATGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002831 GO:0002832 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0008150 GO:0009507 GO:0009536 GO:0016020 GO:0031347 GO:0031348 GO:0032101 GO:0032102 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043901 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0065007 GO:0071944 GO:0080134 GO:1900150 GO:1900424 GO:1900425

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

596

Amino Acids

65.91

Weight (kDa)

7.18

Isoelectric Point (pI)

23.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	27 - 69	9.2e-06	Leucine rich repeat N-terminal domain
Pkinase	PF00069	310 - 568	2e-25	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	321 - 503	1.5e-28	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012859)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28450
fragaria_vesca	FvH4_6g49690
malus_domestica	MD09G1042400.v1.1 MD17G1043700.v1.1
prunus_persica	Prupe.3G275300_v2.0.a1
pyrus_communis	pycom111g03320
rosa_chinensis	RchiOBHm_Chr2g0169711
rosa_laevigata	RLG00000021896
rosa_multiflora	Rmu_sc0022598.1_g000001 Rmu_ssc0000389.1_g000032 Rmu_ssc0000389.1_g000034
rosa_roxburghii	Rroxscaffold_2G00081850
rosa_rugosa	Rorug02G0542400
rosa_samantha	Rh2AG614800 Rh2BG626900 Rh2CG596400 Rh2DG637800
rosa_wichuraiana	Rw2G050960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	671
AatII	GACGTC	2 cut(s)	90, 1343
Acc16I	TGCGCA	1 cut(s)	1721
Acc36I	ACCTGC	1 cut(s)	308
Acc65I	GGTACC	1 cut(s)	735
AccB1I	GGYRCC	3 cut(s)	692, 735, 1063
AccB7I	CCANNNNNTGG	1 cut(s)	190
AccII	CGCG	2 cut(s)	216, 698
AclWI	GGATC	3 cut(s)	318, 334, 451
AcoI	YGGCCR	2 cut(s)	879, 1175
AcsI	RAATTY	2 cut(s)	1057, 1623
AcuI	CTGAAG	1 cut(s)	1533
AcyI	GRCGYC	4 cut(s)	87, 693, 701, 1340
AdeI	CACNNNGTG	1 cut(s)	190
AfaI	GTAC	9 cut(s)	287, 371, 439, 737, 991, 1118, 1417, 1464, 1691
AfiI	CCNNNNNNNGG	7 cut(s)	190, 1073, 1074, 1168, 1291, 1672, 1677
AflII	CTTAAG	1 cut(s)	629
AflIII	ACRYGT	1 cut(s)	249
AgeI	ACCGGT	1 cut(s)	1032
AgsI	TTSAA	6 cut(s)	80, 121, 157, 448, 1499, 1711
AjnI	CCWGG	5 cut(s)	20, 512, 900, 1162, 1692
Alw21I	GWGCWC	1 cut(s)	11
Alw26I	GTCTC	5 cut(s)	101, 202, 258, 1368, 1719
AlwI	GGATC	3 cut(s)	318, 334, 451
AlwNI	CAGNNNCTG	1 cut(s)	307
AoxI	GGCC	4 cut(s)	623, 879, 1159, 1175
ApeKI	GCWGC	3 cut(s)	51, 677, 1205
ApoI	RAATTY	2 cut(s)	1057, 1623
ArsI	GACNNNNNNTTYG	2 cut(s)	10, 42
AsiGI	ACCGGT	1 cut(s)	1032
Asp700I	GAANNNNTTC	2 cut(s)	893, 1101
Asp718I	GGTACC	1 cut(s)	735
AspLEI	GCGC	3 cut(s)	695, 970, 1722
AspS9I	GGNCC	3 cut(s)	410, 623, 1160
AsuC2I	CCSGG	2 cut(s)	419, 601
AsuHPI	GGTGA	2 cut(s)	1220, 1558
AvaII	GGWCC	1 cut(s)	410
BaeGI	GKGCMC	1 cut(s)	266
BalI	TGGCCA	1 cut(s)	1177
BanI	GGYRCC	3 cut(s)	692, 735, 1063
BanII	GRGCYC	2 cut(s)	11, 814
BbsI	GAAGAC	1 cut(s)	87
Bbv12I	GWGCWC	1 cut(s)	11
BbvCI	CCTCAGC	1 cut(s)	242
BbvI	GCAGC	3 cut(s)	38, 664, 1192
BccI	CCATC	3 cut(s)	333, 871, 953
BceAI	ACGGC	1 cut(s)	352
BciT130I	CCWGG	5 cut(s)	22, 514, 902, 1164, 1694
BciVI	GTATCC	1 cut(s)	1419
BclI	TGATCA	1 cut(s)	912
BcnI	CCSGG	2 cut(s)	419, 601
BcoDI	GTCTC	5 cut(s)	101, 202, 258, 1368, 1719
BfaI	CTAG	5 cut(s)	314, 504, 924, 1182, 1305
BfoI	RGCGCY	2 cut(s)	696, 971
BfrI	CTTAAG	1 cut(s)	629
BfuAI	ACCTGC	1 cut(s)	308
BfuI	GTATCC	1 cut(s)	1419
BisI	GCNGC	8 cut(s)	52, 626, 678, 696, 699, 882, 983, 1206
BlpI	GCTNAGC	2 cut(s)	5, 749
BlsI	GCNGC	8 cut(s)	53, 627, 679, 697, 700, 883, 984, 1207
BmcAI	AGTACT	5 cut(s)	287, 991, 1118, 1417, 1464
Bme1390I	CCNGG	7 cut(s)	22, 419, 514, 601, 902, 1164, 1694
Bme18I	GGWCC	1 cut(s)	410
BmgT120I	GGNCC	3 cut(s)	410, 623, 1160
BmiI	GGNNCC	4 cut(s)	411, 694, 737, 1065
BmrFI	CCNGG	7 cut(s)	22, 419, 514, 601, 902, 1164, 1694
BmrI	ACTGGG	2 cut(s)	939, 1491
BmsI	GCATC	3 cut(s)	1060, 1291, 1570
BmuI	ACTGGG	2 cut(s)	939, 1491
BpiI	GAAGAC	1 cut(s)	87
BpmI	CTGGAG	1 cut(s)	1490
Bpu10I	CCTNAGC	2 cut(s)	242, 1046
Bpu1102I	GCTNAGC	2 cut(s)	5, 749
BpuEI	CTTGAG	5 cut(s)	83, 257, 302, 503, 1543
BpuMI	CCSGG	2 cut(s)	419, 601
BsaHI	GRCGYC	4 cut(s)	87, 693, 701, 1340
BsaI	GGTCTC	1 cut(s)	1719
BsaJI	CCNNGG	5 cut(s)	21, 696, 1162, 1231, 1671
BsaWI	WCCGGW	2 cut(s)	392, 1032
BsaXI	ACNNNNNCTCC	6 cut(s)	60, 90, 998, 1028, 1253, 1283
Bsc4I	CCNNNNNNNGG	7 cut(s)	190, 1073, 1074, 1168, 1291, 1672, 1677
Bse118I	RCCGGY	1 cut(s)	1032
Bse1I	ACTGG	3 cut(s)	337, 934, 1486
BseBI	CCWGG	5 cut(s)	22, 514, 902, 1164, 1694
BseDI	CCNNGG	5 cut(s)	21, 696, 1162, 1231, 1671
BseGI	GGATG	2 cut(s)	1051, 1585
BseLI	CCNNNNNNNGG	7 cut(s)	190, 1073, 1074, 1168, 1291, 1672, 1677
BseMII	CTCAG	4 cut(s)	233, 740, 1000, 1395
BseNI	ACTGG	3 cut(s)	337, 934, 1486
BseRI	GAGGAG	1 cut(s)	1106
BseSI	GKGCMC	1 cut(s)	266
BseXI	GCAGC	3 cut(s)	38, 664, 1192
BseYI	CCCAGC	1 cut(s)	680
Bsh1236I	CGCG	2 cut(s)	216, 698
Bsh1285I	CGRYCG	1 cut(s)	214
BshFI	GGCC	4 cut(s)	625, 881, 1161, 1177
BshNI	GGYRCC	3 cut(s)	692, 735, 1063
BshTI	ACCGGT	1 cut(s)	1032
BsiEI	CGRYCG	1 cut(s)	214
BsiHKAI	GWGCWC	1 cut(s)	11
BsiSI	CCGG	4 cut(s)	393, 419, 600, 1033
BslFI	GGGAC	8 cut(s)	117, 164, 260, 568, 946, 1144, 1227, 1454
BslI	CCNNNNNNNGG	7 cut(s)	190, 1073, 1074, 1168, 1291, 1672, 1677
BsmAI	GTCTC	5 cut(s)	101, 202, 258, 1368, 1719
BsmFI	GGGAC	8 cut(s)	117, 164, 260, 568, 946, 1144, 1227, 1454
BsnI	GGCC	4 cut(s)	625, 881, 1161, 1177
Bso31I	GGTCTC	1 cut(s)	1719
Bsp1286I	GDGCHC	3 cut(s)	11, 266, 814
Bsp143I	GATC	5 cut(s)	310, 339, 349, 456, 912
Bsp1720I	GCTNAGC	2 cut(s)	5, 749
Bsp19I	CCATGG	1 cut(s)	1231
BspANI	GGCC	4 cut(s)	625, 881, 1161, 1177
BspCNI	CTCAG	4 cut(s)	234, 741, 999, 1396
BspFNI	CGCG	2 cut(s)	216, 698
BspHI	TCATGA	1 cut(s)	1351
BspLI	GGNNCC	4 cut(s)	411, 694, 737, 1065
BspMI	ACCTGC	1 cut(s)	308
BspPI	GGATC	3 cut(s)	318, 334, 451
BspT107I	GGYRCC	3 cut(s)	692, 735, 1063
BspTI	CTTAAG	1 cut(s)	629
BspTNI	GGTCTC	1 cut(s)	1719
BsrFI	RCCGGY	1 cut(s)	1032
BsrI	ACTGG	3 cut(s)	337, 934, 1486
BssAI	RCCGGY	1 cut(s)	1032
BssECI	CCNNGG	5 cut(s)	21, 696, 1162, 1231, 1671
BssMI	GATC	5 cut(s)	310, 339, 349, 456, 912
BssNI	GRCGYC	4 cut(s)	87, 693, 701, 1340
BssT1I	CCWWGG	2 cut(s)	1231, 1671
Bst2UI	CCWGG	5 cut(s)	22, 514, 902, 1164, 1694
Bst4CI	ACNGT	2 cut(s)	452, 567
Bst6I	CTCTTC	2 cut(s)	752, 1706
BstACI	GRCGYC	4 cut(s)	87, 693, 701, 1340
BstAFI	CTTAAG	1 cut(s)	629
BstC8I	GCNNGC	5 cut(s)	141, 611, 972, 1241, 1775
BstDEI	CTNAG	6 cut(s)	5, 242, 749, 986, 1046, 1404
BstDSI	CCRYGG	2 cut(s)	696, 1231
BstEII	GGTNACC	1 cut(s)	320
BstENI	CCTNNNNNAGG	1 cut(s)	1289
BstF5I	GGATG	2 cut(s)	1051, 1585
BstFNI	CGCG	2 cut(s)	216, 698
BstH2I	RGCGCY	2 cut(s)	696, 971
BstHHI	GCGC	3 cut(s)	695, 970, 1722
BstKTI	GATC	5 cut(s)	313, 342, 352, 459, 915
BstMAI	GTCTC	5 cut(s)	101, 202, 258, 1368, 1719
BstMBI	GATC	5 cut(s)	310, 339, 349, 456, 912
BstMCI	CGRYCG	1 cut(s)	214
BstMWI	GCNNNNNNNGC	3 cut(s)	60, 180, 596
BstNI	CCWGG	5 cut(s)	22, 514, 902, 1164, 1694
BstNSI	RCATGY	1 cut(s)	253
BstPI	GGTNACC	1 cut(s)	320
BstSCI	CCNGG	7 cut(s)	20, 417, 512, 599, 900, 1162, 1692
BstSLI	GKGCMC	1 cut(s)	266
BstUI	CGCG	2 cut(s)	216, 698
BstV1I	GCAGC	3 cut(s)	38, 664, 1192
BstV2I	GAAGAC	1 cut(s)	87
BstX2I	RGATCY	1 cut(s)	310
BstXI	CCANNNNNNTGG	1 cut(s)	332
BstYI	RGATCY	1 cut(s)	310
BsuI	GTATCC	1 cut(s)	1419
BsuRI	GGCC	4 cut(s)	625, 881, 1161, 1177
BtgI	CCRYGG	2 cut(s)	696, 1231
BtsCI	GGATG	2 cut(s)	1051, 1585
BtsI	GCAGTG	1 cut(s)	1506
BtsIMutI	CAGTG	2 cut(s)	1430, 1506
BveI	ACCTGC	1 cut(s)	308
Cac8I	GCNNGC	5 cut(s)	141, 611, 972, 1241, 1775
CaiI	CAGNNNCTG	1 cut(s)	307
CciI	TCATGA	1 cut(s)	1351
CfoI	GCGC	3 cut(s)	695, 970, 1722
Cfr10I	RCCGGY	1 cut(s)	1032
Cfr13I	GGNCC	3 cut(s)	410, 623, 1160
Cfr42I	CCGCGG	1 cut(s)	699
CseI	GACGC	1 cut(s)	690
CsiI	ACCWGGT	1 cut(s)	1692
Csp6I	GTAC	9 cut(s)	286, 370, 438, 736, 990, 1117, 1416, 1463, 1690
CspAI	ACCGGT	1 cut(s)	1032
CviAII	CATG	5 cut(s)	250, 373, 1151, 1232, 1352
CviQI	GTAC	9 cut(s)	286, 370, 438, 736, 990, 1117, 1416, 1463, 1690
DdeI	CTNAG	6 cut(s)	5, 242, 749, 986, 1046, 1404
DinI	GGCGCC	1 cut(s)	694
DpnI	GATC	5 cut(s)	312, 341, 351, 458, 914
DpnII	GATC	5 cut(s)	310, 339, 349, 456, 912
DraIII	CACNNNGTG	1 cut(s)	190
EaeI	YGGCCR	2 cut(s)	879, 1175
Eam1104I	CTCTTC	2 cut(s)	752, 1706
EarI	CTCTTC	2 cut(s)	752, 1706
EciI	GGCGGA	2 cut(s)	812, 884
Ecl136II	GAGCTC	1 cut(s)	9
Eco130I	CCWWGG	2 cut(s)	1231, 1671
Eco24I	GRGCYC	2 cut(s)	11, 814
Eco31I	GGTCTC	1 cut(s)	1719
Eco32I	GATATC	1 cut(s)	1597
Eco47I	GGWCC	1 cut(s)	410
Eco53kI	GAGCTC	1 cut(s)	9
Eco57I	CTGAAG	1 cut(s)	1533
Eco91I	GGTNACC	1 cut(s)	320
EcoICRI	GAGCTC	1 cut(s)	9
EcoNI	CCTNNNNNAGG	1 cut(s)	1289
EcoO65I	GGTNACC	1 cut(s)	320
EcoRII	CCWGG	5 cut(s)	20, 512, 900, 1162, 1692
EcoRV	GATATC	1 cut(s)	1597
EcoT14I	CCWWGG	2 cut(s)	1231, 1671
EcoT38I	GRGCYC	2 cut(s)	11, 814
EgeI	GGCGCC	1 cut(s)	694
EheI	GGCGCC	1 cut(s)	694
ErhI	CCWWGG	2 cut(s)	1231, 1671
FaeI	CATG	5 cut(s)	253, 376, 1154, 1235, 1355
FaqI	GGGAC	8 cut(s)	117, 164, 260, 568, 946, 1144, 1227, 1454
FatI	CATG	5 cut(s)	249, 372, 1150, 1231, 1351
FauI	CCCGC	1 cut(s)	602
FbaI	TGATCA	1 cut(s)	912
Fnu4HI	GCNGC	8 cut(s)	52, 626, 678, 696, 699, 882, 983, 1206
FokI	GGATG	2 cut(s)	1038, 1592
FriOI	GRGCYC	2 cut(s)	11, 814
Fsp4HI	GCNGC	8 cut(s)	52, 626, 678, 696, 699, 882, 983, 1206
FspBI	CTAG	5 cut(s)	314, 504, 924, 1182, 1305
FspI	TGCGCA	1 cut(s)	1721
GlaI	GCGC	3 cut(s)	694, 969, 1721
GluI	GCNGC	8 cut(s)	52, 626, 678, 696, 699, 882, 983, 1206
GsaI	CCCAGC	1 cut(s)	684
GsuI	CTGGAG	1 cut(s)	1490
HaeII	RGCGCY	2 cut(s)	696, 971
HaeIII	GGCC	4 cut(s)	625, 881, 1161, 1177
HapII	CCGG	4 cut(s)	393, 419, 600, 1033
HgaI	GACGC	1 cut(s)	690
HhaI	GCGC	3 cut(s)	695, 970, 1722
Hin1I	GRCGYC	4 cut(s)	87, 693, 701, 1340
Hin1II	CATG	5 cut(s)	253, 376, 1154, 1235, 1355
Hin6I	GCGC	3 cut(s)	693, 968, 1720
HinP1I	GCGC	3 cut(s)	693, 968, 1720
HindIII	AAGCTT	4 cut(s)	114, 473, 1100, 1331
HpaII	CCGG	4 cut(s)	393, 419, 600, 1033
HphI	GGTGA	2 cut(s)	1220, 1558
Hpy166II	GTNNAC	3 cut(s)	438, 998, 1699
Hpy188I	TCNGA	8 cut(s)	339, 456, 466, 843, 1056, 1345, 1638, 1741
Hpy188III	TCNNGA	9 cut(s)	308, 445, 520, 1352, 1403, 1469, 1496, 1602, 1665
Hpy8I	GTNNAC	3 cut(s)	438, 998, 1699
Hpy99I	CGWCG	1 cut(s)	89
HpyAV	CCTTC	2 cut(s)	757, 1511
HpyCH4III	ACNGT	2 cut(s)	452, 567
HpyCH4IV	ACGT	3 cut(s)	87, 1340, 1443
HpyCH4V	TGCA	5 cut(s)	291, 301, 430, 826, 1208
HpyF10VI	GCNNNNNNNGC	3 cut(s)	60, 180, 596
HpyF3I	CTNAG	6 cut(s)	5, 242, 749, 986, 1046, 1404
HpySE526I	ACGT	3 cut(s)	87, 1340, 1443
Hsp92I	GRCGYC	4 cut(s)	87, 693, 701, 1340
Hsp92II	CATG	5 cut(s)	253, 376, 1154, 1235, 1355
HspAI	GCGC	3 cut(s)	693, 968, 1720
KasI	GGCGCC	1 cut(s)	692
KpnI	GGTACC	1 cut(s)	739
Ksp22I	TGATCA	1 cut(s)	912
KspI	CCGCGG	1 cut(s)	699
Kzo9I	GATC	5 cut(s)	310, 339, 349, 456, 912
LmnI	GCTCC	3 cut(s)	68, 1274, 1405
Lsp1109I	GCAGC	3 cut(s)	38, 664, 1192
LweI	GCATC	3 cut(s)	1060, 1291, 1570
MabI	ACCWGGT	1 cut(s)	1692
MaeI	CTAG	5 cut(s)	314, 504, 924, 1182, 1305
MaeII	ACGT	3 cut(s)	87, 1340, 1443
MaeIII	GTNAC	3 cut(s)	320, 376, 1146
MalI	GATC	5 cut(s)	312, 341, 351, 458, 914
MboI	GATC	5 cut(s)	310, 339, 349, 456, 912
MboII	GAAGA	5 cut(s)	92, 667, 769, 1526, 1723
MflI	RGATCY	1 cut(s)	310
MhlI	GDGCHC	3 cut(s)	11, 266, 814
MlsI	TGGCCA	1 cut(s)	1177
MluCI	AATT	8 cut(s)	672, 892, 975, 1057, 1623, 1631, 1641, 1651
MluNI	TGGCCA	1 cut(s)	1177
Mly113I	GGCGCC	1 cut(s)	693
MlyI	GAGTC	1 cut(s)	99
MmeI	TCCRAC	2 cut(s)	133, 1002
Mox20I	TGGCCA	1 cut(s)	1177
MroXI	GAANNNNTTC	2 cut(s)	893, 1101
MscI	TGGCCA	1 cut(s)	1177
MseI	TTAA	5 cut(s)	630, 861, 978, 1368, 1524
MslI	CAYNNNNRTG	2 cut(s)	1155, 1617
Msp20I	TGGCCA	1 cut(s)	1177
MspA1I	CMGCKG	1 cut(s)	698
MspCI	CTTAAG	1 cut(s)	629
MspI	CCGG	4 cut(s)	393, 419, 600, 1033
MspR9I	CCNGG	7 cut(s)	22, 419, 514, 601, 902, 1164, 1694
MvaI	CCWGG	5 cut(s)	22, 514, 902, 1164, 1694
MvnI	CGCG	2 cut(s)	216, 698
MwoI	GCNNNNNNNGC	3 cut(s)	60, 180, 596
NarI	GGCGCC	1 cut(s)	693
NciI	CCSGG	2 cut(s)	419, 601
NcoI	CCATGG	1 cut(s)	1231
NdeII	GATC	5 cut(s)	310, 339, 349, 456, 912
NlaIII	CATG	5 cut(s)	253, 376, 1154, 1235, 1355
NlaIV	GGNNCC	4 cut(s)	411, 694, 737, 1065
NsbI	TGCGCA	1 cut(s)	1721
NspI	RCATGY	1 cut(s)	253
PagI	TCATGA	1 cut(s)	1351
PciI	ACATGT	1 cut(s)	249
PdmI	GAANNNNTTC	2 cut(s)	893, 1101
PfeI	GAWTC	9 cut(s)	220, 225, 268, 304, 402, 658, 1279, 1346, 1549
PflFI	GACNNNGTC	1 cut(s)	86
PflMI	CCANNNNNTGG	1 cut(s)	190
PinAI	ACCGGT	1 cut(s)	1032
PkrI	GCNGC	8 cut(s)	53, 627, 679, 697, 700, 883, 984, 1207
PleI	GAGTC	1 cut(s)	99
PluTI	GGCGCC	1 cut(s)	696
PpsI	GAGTC	1 cut(s)	99
PscI	ACATGT	1 cut(s)	249
PsiI	TTATAA	1 cut(s)	671
Psp124BI	GAGCTC	1 cut(s)	11
Psp6I	CCWGG	5 cut(s)	20, 512, 900, 1162, 1692
PspEI	GGTNACC	1 cut(s)	320
PspFI	CCCAGC	1 cut(s)	680
PspGI	CCWGG	5 cut(s)	20, 512, 900, 1162, 1692
PspN4I	GGNNCC	4 cut(s)	411, 694, 737, 1065
PspPI	GGNCC	3 cut(s)	410, 623, 1160
PstNI	CAGNNNCTG	1 cut(s)	307
PsuI	RGATCY	1 cut(s)	310
PsyI	GACNNNGTC	1 cut(s)	86
RsaI	GTAC	9 cut(s)	287, 371, 439, 737, 991, 1118, 1417, 1464, 1691
RsaNI	GTAC	9 cut(s)	286, 370, 438, 736, 990, 1117, 1416, 1463, 1690
RseI	CAYNNNNRTG	2 cut(s)	1155, 1617
SacI	GAGCTC	1 cut(s)	11
SacII	CCGCGG	1 cut(s)	699
SaqAI	TTAA	5 cut(s)	630, 861, 978, 1368, 1524
SatI	GCNGC	8 cut(s)	52, 626, 678, 696, 699, 882, 983, 1206
Sau3AI	GATC	5 cut(s)	310, 339, 349, 456, 912
Sau96I	GGNCC	3 cut(s)	410, 623, 1160
ScaI	AGTACT	5 cut(s)	287, 991, 1118, 1417, 1464
SchI	GAGTC	1 cut(s)	99
ScrFI	CCNGG	7 cut(s)	22, 419, 514, 601, 902, 1164, 1694
SduI	GDGCHC	3 cut(s)	11, 266, 814
SexAI	ACCWGGT	1 cut(s)	1692
SfaNI	GCATC	3 cut(s)	1060, 1291, 1570
SfoI	GGCGCC	1 cut(s)	694
Sfr303I	CCGCGG	1 cut(s)	699
SgrBI	CCGCGG	1 cut(s)	699
SinI	GGWCC	1 cut(s)	410
SmiMI	CAYNNNNRTG	2 cut(s)	1155, 1617
SmlI	CTYRAG	7 cut(s)	10, 98, 236, 281, 518, 629, 1558
SmoI	CTYRAG	7 cut(s)	10, 98, 236, 281, 518, 629, 1558
Sse9I	AATT	8 cut(s)	672, 892, 975, 1057, 1623, 1631, 1641, 1651
SspDI	GGCGCC	1 cut(s)	692
SspMI	CTAG	5 cut(s)	314, 504, 924, 1182, 1305
SstI	GAGCTC	1 cut(s)	11
StyD4I	CCNGG	7 cut(s)	20, 417, 512, 599, 900, 1162, 1692
StyI	CCWWGG	2 cut(s)	1231, 1671
TaaI	ACNGT	2 cut(s)	452, 567
TaiI	ACGT	3 cut(s)	90, 1343, 1446
TaqI	TCGA	3 cut(s)	223, 920, 1124
TasI	AATT	8 cut(s)	672, 892, 975, 1057, 1623, 1631, 1641, 1651
TatI	WGTACW	6 cut(s)	285, 437, 989, 1116, 1415, 1462
TauI	GCSGC	5 cut(s)	628, 698, 701, 884, 985
TfiI	GAWTC	9 cut(s)	220, 225, 268, 304, 402, 658, 1279, 1346, 1549
Tru1I	TTAA	5 cut(s)	630, 861, 978, 1368, 1524
Tru9I	TTAA	5 cut(s)	630, 861, 978, 1368, 1524
TscAI	CASTG	2 cut(s)	1437, 1513
TseI	GCWGC	3 cut(s)	51, 677, 1205
TspDTI	ATGAA	3 cut(s)	166, 1043, 1635
TspRI	CASTG	2 cut(s)	1437, 1513
Tth111I	GACNNNGTC	1 cut(s)	86
Van91I	CCANNNNNTGG	1 cut(s)	190
Vha464I	CTTAAG	1 cut(s)	629
VpaK11BI	GGWCC	1 cut(s)	410
XagI	CCTNNNNNAGG	1 cut(s)	1289
XapI	RAATTY	2 cut(s)	1057, 1623
XceI	RCATGY	1 cut(s)	253
XmnI	GAANNNNTTC	2 cut(s)	893, 1101
XspI	CTAG	5 cut(s)	314, 504, 924, 1182, 1305
ZraI	GACGTC	2 cut(s)	88, 1341
ZrmI	AGTACT	5 cut(s)	287, 991, 1118, 1417, 1464

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.