No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0389381 RchiOBHm_Chr5g0042821 |
| rosa_laevigata | RLG00000003038 |
| rosa_multiflora | Rmu_sc0003765.1_g000049 |
| rosa_roxburghii | Rroxscaffold_2G00138470 Rroxscaffold_4G00304200 |
| rosa_rugosa | Rorug03G0014100 Rorug05G0266500.1 |
| rosa_samantha | Rh7AG254600 Rh7DG262100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfiI | CCNNNNNNNGG | 1 cut(s) | 142 |
| AgsI | TTSAA | 1 cut(s) | 62 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 57, 89 |
| AluBI | AGCT | 3 cut(s) | 32, 161, 275 |
| AluI | AGCT | 3 cut(s) | 32, 161, 275 |
| AsuII | TTCGAA | 1 cut(s) | 156 |
| AsuNHI | GCTAGC | 1 cut(s) | 146 |
| BbsI | GAAGAC | 1 cut(s) | 135 |
| BclI | TGATCA | 1 cut(s) | 295 |
| BfaI | CTAG | 1 cut(s) | 147 |
| BmsI | GCATC | 2 cut(s) | 70, 196 |
| BmtI | GCTAGC | 1 cut(s) | 150 |
| BpiI | GAAGAC | 1 cut(s) | 135 |
| Bpu14I | TTCGAA | 1 cut(s) | 156 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 142 |
| BseGI | GGATG | 1 cut(s) | 132 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 142 |
| BseMII | CTCAG | 2 cut(s) | 128, 285 |
| BseRI | GAGGAG | 1 cut(s) | 89 |
| BslFI | GGGAC | 1 cut(s) | 35 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 142 |
| BsmFI | GGGAC | 1 cut(s) | 35 |
| Bsp119I | TTCGAA | 1 cut(s) | 156 |
| Bsp143I | GATC | 1 cut(s) | 295 |
| BspCNI | CTCAG | 2 cut(s) | 129, 284 |
| BspOI | GCTAGC | 1 cut(s) | 150 |
| BspT104I | TTCGAA | 1 cut(s) | 156 |
| BssMI | GATC | 1 cut(s) | 295 |
| Bst4CI | ACNGT | 1 cut(s) | 110 |
| BstBI | TTCGAA | 1 cut(s) | 156 |
| BstC8I | GCNNGC | 1 cut(s) | 148 |
| BstDEI | CTNAG | 2 cut(s) | 137, 271 |
| BstF5I | GGATG | 1 cut(s) | 132 |
| BstKTI | GATC | 1 cut(s) | 298 |
| BstMBI | GATC | 1 cut(s) | 295 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 281 |
| BstV2I | GAAGAC | 1 cut(s) | 135 |
| BtsCI | GGATG | 1 cut(s) | 132 |
| Cac8I | GCNNGC | 1 cut(s) | 148 |
| CviAII | CATG | 3 cut(s) | 41, 92, 319 |
| CviJI | RGCY | 5 cut(s) | 32, 146, 161, 191, 275 |
| CviKI_1 | RGCY | 5 cut(s) | 32, 146, 161, 191, 275 |
| DdeI | CTNAG | 2 cut(s) | 137, 271 |
| DpnI | GATC | 1 cut(s) | 297 |
| DpnII | GATC | 1 cut(s) | 295 |
| FaeI | CATG | 3 cut(s) | 44, 95, 322 |
| FaiI | YATR | 8 cut(s) | 9, 22, 42, 93, 123, 177, 221, 320 |
| FaqI | GGGAC | 1 cut(s) | 35 |
| FatI | CATG | 3 cut(s) | 40, 91, 318 |
| FbaI | TGATCA | 1 cut(s) | 295 |
| FokI | GGATG | 1 cut(s) | 119 |
| FspBI | CTAG | 1 cut(s) | 147 |
| Hin1II | CATG | 3 cut(s) | 44, 95, 322 |
| HinfI | GANTC | 1 cut(s) | 139 |
| Hpy188I | TCNGA | 1 cut(s) | 183 |
| Hpy188III | TCNNGA | 2 cut(s) | 77, 136 |
| HpyAV | CCTTC | 2 cut(s) | 56, 178 |
| HpyCH4III | ACNGT | 1 cut(s) | 110 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 281 |
| HpyF3I | CTNAG | 2 cut(s) | 137, 271 |
| Hsp92II | CATG | 3 cut(s) | 44, 95, 322 |
| Ksp22I | TGATCA | 1 cut(s) | 295 |
| Kzo9I | GATC | 1 cut(s) | 295 |
| LpnPI | CCDG | 2 cut(s) | 128, 149 |
| LweI | GCATC | 2 cut(s) | 70, 196 |
| MaeI | CTAG | 1 cut(s) | 147 |
| MaeIII | GTNAC | 2 cut(s) | 211, 224 |
| MalI | GATC | 1 cut(s) | 297 |
| MboI | GATC | 1 cut(s) | 295 |
| MboII | GAAGA | 1 cut(s) | 140 |
| MluCI | AATT | 3 cut(s) | 151, 289, 304 |
| MlyI | GAGTC | 1 cut(s) | 148 |
| MnlI | CCTC | 3 cut(s) | 6, 107, 110 |
| MseI | TTAA | 4 cut(s) | 105, 288, 303, 327 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 281 |
| NdeII | GATC | 1 cut(s) | 295 |
| NheI | GCTAGC | 1 cut(s) | 146 |
| NlaIII | CATG | 3 cut(s) | 44, 95, 322 |
| NmuCI | GTSAC | 1 cut(s) | 224 |
| NspV | TTCGAA | 1 cut(s) | 156 |
| PleI | GAGTC | 1 cut(s) | 147 |
| PpsI | GAGTC | 1 cut(s) | 147 |
| SaqAI | TTAA | 4 cut(s) | 105, 288, 303, 327 |
| Sau3AI | GATC | 1 cut(s) | 295 |
| SchI | GAGTC | 1 cut(s) | 148 |
| SetI | ASST | 3 cut(s) | 34, 163, 277 |
| SfaNI | GCATC | 2 cut(s) | 70, 196 |
| SfuI | TTCGAA | 1 cut(s) | 156 |
| Sse9I | AATT | 3 cut(s) | 151, 289, 304 |
| SspMI | CTAG | 1 cut(s) | 147 |
| TaaI | ACNGT | 1 cut(s) | 110 |
| TaqI | TCGA | 3 cut(s) | 112, 126, 156 |
| TasI | AATT | 3 cut(s) | 151, 289, 304 |
| Tru1I | TTAA | 4 cut(s) | 105, 288, 303, 327 |
| Tru9I | TTAA | 4 cut(s) | 105, 288, 303, 327 |
| TseFI | GTSAC | 1 cut(s) | 224 |
| Tsp45I | GTSAC | 1 cut(s) | 224 |
| XspI | CTAG | 1 cut(s) | 147 |