Rorug03G0025500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0018454
Physical Location & Seq
Reverse (-)
1984848 .. 1990186
5339 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0025500.1

Sequence Viewer

Length: 1605 bp
ATGGCTGATGAAAATCCGAGCTTTGGTGTACATGATGGGGATCACGTACCCGCGTCTGAGGTTGTGACTCAGCCTGAGATTGAGAATGCAGAGGCCGAGGCTGAGGCTGAGGTGCTAGCCATGGCGGAGGCTCAGGCAATGACAGGAGAGGCACAAGTTATTGCAGACGCTCAGGCAATGGCAGCAGAGGCTCAAGAAATGGAAGCAGAGGCTCGGGCCAGGGCACAGGCTCATGCAATGGCAGCAGAGGCTCAAGCCATACTTGAGGCACAGGCTGAGGCAGAGGGACAGGTTGAGCTGGTTGGGCAGCTACAAGAGGAGGAGTTACTGCCTGAACATGACCAAGAGCGTCATGAAGATGCTGGGGGTGTGGAAGGTGAGAAGAAGTGGCCTGGATGGCCTGGTGAGAGTGTTTTCCGGATGTTGGTTCCTGCTCAGAAGGTGGGTAGTATAATTGGACGCAAAGGGGAGTTCATTAAAAAAATAGTGGAGGAGACGCGAGCTCGCATTAAAATCCTTGATGGTCCTCCAGGAACAACTGAAAGAGCTGTAATGGTTTCCGGCAAGGAGGAGCCTGATTCTTCCCTCCCTCCTGCAATTGATGGCCTTTTGAGAGTTCATGCACGCATTGTTGATGGTTTGGATGCTGATTCTTCTCAAGCTCCCCCAGGCATGGGTGGTAAAGTTTCGACAAGGATGCTGGTTCCAGCCTCACAGGCTGGTAGCTTGATTGGAAAACAGGGAGGAACTGTTAAATCCATTCAAGAGGCATCTAACTGTATAGTTAGAGTTCTTGGATCAGAGGACCTACCGGTTTTTGCTCTTTCAGATGACAGAGTTGTTGAAGTAGTGGGCGAGCCAGTTGGTGTCCACAAAGGAATTGAACTAATTGCATCTCACCTCAGGAAGTTTTTAGTTGACCGCAGTATAATTCCAGTATTTGAAATGCATATGCAGGCAAATCCTCCCATGGAGCACATTCCCCCTCATCAATCATGGGGTCCACCTCAAGGTATTCCACACAATGCTGGTGGGGGTCCTGGATATGGGCCACCTAATCCCCAGTACATACCATCTTCTCGGCAGCAATTTGACAACTACTATCCACCAGCTGACTTGCCCCCGCCTATGGAGAAACAGCCGCATCATGGCATATCAGCTTATGGACGAGAAGCTCCTATGGGTGTTCATACATCATCAAATGCTCAATCAGCACCATCAATGGTCTCACAGCTCACACATCAAATGCAAATTCCATTGTCATATGCTGATGCTGTTATTGGCACAGCGGGTGCAAGTATAAGCTATATTCGTCGGGCTAGTGGGGCAACTGTTACAATACAAGAGACGAGGGGTGTTCCTGGGGAGATGACTGTTGAAATAAGTGGAAGTGCTTCCCAAGTCCAAGCAGCTGAGCAACTGATACAGAACTTCATGGTCGAGGCTGGAGCACCACAACAGCCACAAGCTGCTGCCCCTGTGGATCAGGGTTATAATTCCTATCCAGCTCATGGTTCCGTGTATGCATCTCCCCCATCCAACCAAGGTCACCAAGGCCATACTGGCGGCTATGGCTCAGTCTATGGCCAACACTATGGTTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

534

Amino Acids

56.54

Weight (kDa)

4.88

Isoelectric Point (pI)

43.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KH_1 PF00013 139 - 191 1.5e-14 KH domain
KH_1 PF00013 231 - 298 1.1e-15 KH domain
KH_1 PF00013 413 - 476 5.1e-13 KH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018454)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g08340
malus_domestica MD12G1201300.v1.1
prunus_persica Prupe.6G306400_v2.0.a1
rosa_chinensis RchiOBHm_Chr3g0458221
rosa_roxburghii Rroxscaffold_6G00421210
rosa_rugosa Rorug03G0025500
rosa_samantha Rh3AG086300 Rh3BG089000 Rh3CG089600 Rh3DG090100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1494
AccB7I CCANNNNNTGG 1 cut(s) 1511
AccII CGCG 2 cut(s) 53, 499
AccIII TCCGGA 1 cut(s) 417
AciI CCGC 7 cut(s) 51, 125, 922, 1124, 1142, 1289, 1566
AclWI GGATC 3 cut(s) 48, 805, 1491
AcoI YGGCCR 1 cut(s) 1585
AcsI RAATTY 1 cut(s) 1251
AfaI GTAC 3 cut(s) 30, 48, 1067
AfiI CCNNNNNNNGG 9 cut(s) 23, 424, 673, 674, 1010, 1046, 1129, 1148, 1511
AgeI ACCGGT 1 cut(s) 811
AgsI TTSAA 5 cut(s) 764, 845, 884, 944, 1379
AjnI CCWGG 7 cut(s) 218, 391, 400, 529, 667, 1039, 1360
Alw21I GWGCWC 3 cut(s) 505, 978, 1453
Alw26I GTCTC 3 cut(s) 488, 1231, 1340
AlwI GGATC 3 cut(s) 48, 805, 1491
Ama87I CYCGRG 1 cut(s) 213
Aor13HI TCCGGA 1 cut(s) 417
AoxI GGCC 8 cut(s) 93, 216, 389, 398, 604, 1049, 1555, 1585
ApeKI GCWGC 7 cut(s) 182, 242, 307, 1084, 1409, 1469, 1472
ApoI RAATTY 1 cut(s) 1251
AsiGI ACCGGT 1 cut(s) 811
Asp700I GAANNNNTTC 1 cut(s) 1393
AspS9I GGNCC 6 cut(s) 216, 524, 805, 1001, 1037, 1049
AsuHPI GGTGA 4 cut(s) 389, 416, 890, 1541
AsuNHI GCTAGC 1 cut(s) 115
AvaI CYCGRG 1 cut(s) 213
AvaII GGWCC 4 cut(s) 524, 805, 1001, 1037
AxyI CCTNAGG 1 cut(s) 902
BaeGI GKGCMC 1 cut(s) 226
BalI TGGCCA 1 cut(s) 1587
BanII GRGCYC 1 cut(s) 505
Bbv12I GWGCWC 3 cut(s) 505, 978, 1453
BbvCI CCTCAGC 3 cut(s) 102, 108, 276
BbvI GCAGC 7 cut(s) 194, 254, 319, 1096, 1421, 1456, 1459
BccI CCATC 8 cut(s) 29, 390, 515, 596, 629, 1081, 1225, 1543
BcgI CGANNNNNNTGC 2 cut(s) 679, 713
BciT130I CCWGG 7 cut(s) 220, 393, 402, 531, 669, 1041, 1362
BcoDI GTCTC 3 cut(s) 488, 1231, 1340
BfaI CTAG 3 cut(s) 116, 1320, 1603
BglI GCCNNNNNGGC 3 cut(s) 397, 716, 1563
BisI GCNGC 9 cut(s) 183, 243, 308, 1085, 1142, 1410, 1470, 1473, 1567
BlpI GCTNAGC 1 cut(s) 1413
BlsI GCNGC 9 cut(s) 184, 244, 309, 1086, 1143, 1411, 1471, 1474, 1568
Bme1390I CCNGG 7 cut(s) 220, 393, 402, 531, 669, 1041, 1362
Bme18I GGWCC 4 cut(s) 524, 805, 1001, 1037
BmeT110I CYCGRG 1 cut(s) 213
BmgT120I GGNCC 6 cut(s) 216, 524, 805, 1001, 1037, 1049
BmiI GGNNCC 6 cut(s) 429, 573, 705, 1002, 1038, 1516
BmrFI CCNGG 7 cut(s) 220, 393, 402, 531, 669, 1041, 1362
BmrI ACTGGG 1 cut(s) 1057
BmsI GCATC 8 cut(s) 349, 634, 687, 779, 902, 1153, 1261, 1535
BmtI GCTAGC 1 cut(s) 119
BmuI ACTGGG 1 cut(s) 1057
BpmI CTGGAG 2 cut(s) 513, 1467
Bpu10I CCTNAGC 5 cut(s) 102, 108, 132, 171, 276
Bpu1102I GCTNAGC 1 cut(s) 1413
BpuEI CTTGAG 5 cut(s) 177, 237, 284, 642, 993
BsaAI YACGTR 1 cut(s) 46
BsaBI GATNNNNATC 2 cut(s) 12, 39
BsaI GGTCTC 1 cut(s) 1231
BsaJI CCNNGG 8 cut(s) 96, 120, 219, 667, 969, 1361, 1543, 1552
BsaWI WCCGGW 2 cut(s) 417, 811
BsaXI ACNNNNNCTCC 2 cut(s) 735, 765
Bsc4I CCNNNNNNNGG 9 cut(s) 23, 424, 673, 674, 1010, 1046, 1129, 1148, 1511
Bse118I RCCGGY 1 cut(s) 811
Bse1I ACTGG 4 cut(s) 860, 935, 1063, 1567
Bse21I CCTNAGG 1 cut(s) 902
Bse3DI GCAATG 3 cut(s) 144, 183, 243
Bse8I GATNNNNATC 2 cut(s) 12, 39
BseAI TCCGGA 1 cut(s) 417
BseBI CCWGG 7 cut(s) 220, 393, 402, 531, 669, 1041, 1362
BseDI CCNNGG 8 cut(s) 96, 120, 219, 667, 969, 1361, 1543, 1552
BseGI GGATG 5 cut(s) 401, 426, 649, 702, 1535
BseJI GATNNNNATC 2 cut(s) 12, 39
BseLI CCNNNNNNNGG 9 cut(s) 23, 424, 673, 674, 1010, 1046, 1129, 1148, 1511
BseMI GCAATG 3 cut(s) 144, 183, 243
BseNI ACTGG 4 cut(s) 860, 935, 1063, 1567
BseRI GAGGAG 4 cut(s) 332, 335, 506, 584
BseSI GKGCMC 1 cut(s) 226
BseXI GCAGC 7 cut(s) 194, 254, 319, 1096, 1421, 1456, 1459
BseYI CCCAGC 1 cut(s) 362
Bsh1236I CGCG 2 cut(s) 53, 499
BshFI GGCC 8 cut(s) 95, 218, 391, 400, 606, 1051, 1557, 1587
BshTI ACCGGT 1 cut(s) 811
BsiHKAI GWGCWC 3 cut(s) 505, 978, 1453
BsiHKCI CYCGRG 1 cut(s) 213
BsiSI CCGG 3 cut(s) 418, 561, 812
BslFI GGGAC 1 cut(s) 300
BslI CCNNNNNNNGG 9 cut(s) 23, 424, 673, 674, 1010, 1046, 1129, 1148, 1511
BsmAI GTCTC 3 cut(s) 488, 1231, 1340
BsmBI CGTCTC 2 cut(s) 488, 1340
BsmFI GGGAC 1 cut(s) 300
BsmI GAATGC 1 cut(s) 91
BsnI GGCC 8 cut(s) 95, 218, 391, 400, 606, 1051, 1557, 1587
Bso31I GGTCTC 1 cut(s) 1231
BsoBI CYCGRG 1 cut(s) 213
Bsp1286I GDGCHC 4 cut(s) 226, 505, 978, 1453
Bsp13I TCCGGA 1 cut(s) 417
Bsp1407I TGTACA 1 cut(s) 28
Bsp143I GATC 3 cut(s) 40, 797, 1483
Bsp1720I GCTNAGC 1 cut(s) 1413
Bsp19I CCATGG 2 cut(s) 120, 969
BspACI CCGC 7 cut(s) 51, 125, 922, 1124, 1142, 1289, 1566
BspANI GGCC 8 cut(s) 95, 218, 391, 400, 606, 1051, 1557, 1587
BspEI TCCGGA 1 cut(s) 417
BspFNI CGCG 2 cut(s) 53, 499
BspHI TCATGA 1 cut(s) 352
BspLI GGNNCC 6 cut(s) 429, 573, 705, 1002, 1038, 1516
BspOI GCTAGC 1 cut(s) 119
BspPI GGATC 3 cut(s) 48, 805, 1491
BspTNI GGTCTC 1 cut(s) 1231
BsrDI GCAATG 3 cut(s) 144, 183, 243
BsrFI RCCGGY 1 cut(s) 811
BsrGI TGTACA 1 cut(s) 28
BsrI ACTGG 4 cut(s) 860, 935, 1063, 1567
BssAI RCCGGY 1 cut(s) 811
BssECI CCNNGG 8 cut(s) 96, 120, 219, 667, 969, 1361, 1543, 1552
BssMI GATC 3 cut(s) 40, 797, 1483
BssT1I CCWWGG 4 cut(s) 120, 969, 1543, 1552
Bst2UI CCWGG 7 cut(s) 220, 393, 402, 531, 669, 1041, 1362
Bst4CI ACNGT 4 cut(s) 751, 779, 1333, 1375
BstAUI TGTACA 1 cut(s) 28
BstBAI YACGTR 1 cut(s) 46
BstC8I GCNNGC 6 cut(s) 117, 501, 505, 625, 857, 957
BstDSI CCRYGG 2 cut(s) 120, 969
BstEII GGTNACC 1 cut(s) 1547
BstF5I GGATG 5 cut(s) 401, 426, 649, 702, 1535
BstFNI CGCG 2 cut(s) 53, 499
BstKTI GATC 3 cut(s) 43, 800, 1486
BstMAI GTCTC 3 cut(s) 488, 1231, 1340
BstMBI GATC 3 cut(s) 40, 797, 1483
BstNI CCWGG 7 cut(s) 220, 393, 402, 531, 669, 1041, 1362
BstPI GGTNACC 1 cut(s) 1547
BstSCI CCNGG 7 cut(s) 218, 391, 400, 529, 667, 1039, 1360
BstSLI GKGCMC 1 cut(s) 226
BstUI CGCG 2 cut(s) 53, 499
BstV1I GCAGC 7 cut(s) 194, 254, 319, 1096, 1421, 1456, 1459
BstXI CCANNNNNNTGG 1 cut(s) 1595
Bsu36I CCTNAGG 1 cut(s) 902
BsuRI GGCC 8 cut(s) 95, 218, 391, 400, 606, 1051, 1557, 1587
BtgI CCRYGG 2 cut(s) 120, 969
BtsCI GGATG 5 cut(s) 401, 426, 649, 702, 1535
Cac8I GCNNGC 6 cut(s) 117, 501, 505, 625, 857, 957
CciI TCATGA 1 cut(s) 352
Cfr10I RCCGGY 1 cut(s) 811
Cfr13I GGNCC 6 cut(s) 216, 524, 805, 1001, 1037, 1049
CseI GACGC 5 cut(s) 42, 176, 338, 468, 505
Csp6I GTAC 3 cut(s) 29, 47, 1066
CspAI ACCGGT 1 cut(s) 811
CspCI CAANNNNNGTGG 2 cut(s) 1012, 1047
CviQI GTAC 3 cut(s) 29, 47, 1066
DpnI GATC 3 cut(s) 42, 799, 1485
DpnII GATC 3 cut(s) 40, 797, 1483
EaeI YGGCCR 1 cut(s) 1585
EciI GGCGGA 1 cut(s) 140
Ecl136II GAGCTC 1 cut(s) 503
Eco130I CCWWGG 4 cut(s) 120, 969, 1543, 1552
Eco24I GRGCYC 1 cut(s) 505
Eco31I GGTCTC 1 cut(s) 1231
Eco47I GGWCC 4 cut(s) 524, 805, 1001, 1037
Eco53kI GAGCTC 1 cut(s) 503
Eco81I CCTNAGG 1 cut(s) 902
Eco88I CYCGRG 1 cut(s) 213
Eco91I GGTNACC 1 cut(s) 1547
EcoICRI GAGCTC 1 cut(s) 503
EcoO109I RGGNCCY 2 cut(s) 805, 1037
EcoO65I GGTNACC 1 cut(s) 1547
EcoRII CCWGG 7 cut(s) 218, 391, 400, 529, 667, 1039, 1360
EcoT14I CCWWGG 4 cut(s) 120, 969, 1543, 1552
EcoT22I ATGCAT 2 cut(s) 951, 1528
EcoT38I GRGCYC 1 cut(s) 505
ErhI CCWWGG 4 cut(s) 120, 969, 1543, 1552
Esp3I CGTCTC 2 cut(s) 488, 1340
FalI AAGNNNNNCTT 2 cut(s) 246, 278
FaqI GGGAC 1 cut(s) 300
FauI CCCGC 3 cut(s) 58, 1131, 1282
FauNDI CATATG 2 cut(s) 951, 1264
Fnu4HI GCNGC 9 cut(s) 183, 243, 308, 1085, 1142, 1410, 1470, 1473, 1567
FokI GGATG 5 cut(s) 408, 433, 656, 709, 1522
FriOI GRGCYC 1 cut(s) 505
Fsp4HI GCNGC 9 cut(s) 183, 243, 308, 1085, 1142, 1410, 1470, 1473, 1567
FspBI CTAG 3 cut(s) 116, 1320, 1603
GluI GCNGC 9 cut(s) 183, 243, 308, 1085, 1142, 1410, 1470, 1473, 1567
GsaI CCCAGC 1 cut(s) 366
GsuI CTGGAG 2 cut(s) 513, 1467
HaeIII GGCC 8 cut(s) 95, 218, 391, 400, 606, 1051, 1557, 1587
HapII CCGG 3 cut(s) 418, 561, 812
HgaI GACGC 5 cut(s) 42, 176, 338, 468, 505
HincII GTYRAC 1 cut(s) 919
HindII GTYRAC 1 cut(s) 919
HinfI GANTC 3 cut(s) 67, 578, 650
HpaII CCGG 3 cut(s) 418, 561, 812
HphI GGTGA 4 cut(s) 389, 416, 890, 1541
Hpy166II GTNNAC 4 cut(s) 29, 871, 919, 1004
Hpy188I TCNGA 5 cut(s) 18, 58, 438, 802, 829
Hpy188III TCNNGA 5 cut(s) 194, 353, 418, 764, 904
Hpy8I GTNNAC 4 cut(s) 29, 871, 919, 1004
Hpy99I CGWCG 1 cut(s) 1317
HpyAV CCTTC 2 cut(s) 368, 433
HpyCH4III ACNGT 4 cut(s) 751, 779, 1333, 1375
HpyCH4IV ACGT 1 cut(s) 45
HpySE526I ACGT 1 cut(s) 45
Kpn2I TCCGGA 1 cut(s) 417
Kzo9I GATC 3 cut(s) 40, 797, 1483
LmnI GCTCC 5 cut(s) 571, 667, 973, 1180, 1448
Lsp1109I GCAGC 7 cut(s) 194, 254, 319, 1096, 1421, 1456, 1459
LweI GCATC 8 cut(s) 349, 634, 687, 779, 902, 1153, 1261, 1535
MaeI CTAG 3 cut(s) 116, 1320, 1603
MaeII ACGT 1 cut(s) 45
MaeIII GTNAC 5 cut(s) 64, 324, 1333, 1547, 1598
MalI GATC 3 cut(s) 42, 799, 1485
MboI GATC 3 cut(s) 40, 797, 1483
MboII GAAGA 5 cut(s) 368, 394, 573, 645, 1068
MfeI CAATTG 1 cut(s) 597
MhlI GDGCHC 4 cut(s) 226, 505, 978, 1453
MlsI TGGCCA 1 cut(s) 1587
MluCI AATT 8 cut(s) 453, 597, 879, 888, 930, 1088, 1251, 1495
MluNI TGGCCA 1 cut(s) 1587
MlyI GAGTC 1 cut(s) 61
MmeI TCCRAC 1 cut(s) 1563
Mox20I TGGCCA 1 cut(s) 1587
Mph1103I ATGCAT 2 cut(s) 951, 1528
MroI TCCGGA 1 cut(s) 417
MroXI GAANNNNTTC 1 cut(s) 1393
MscI TGGCCA 1 cut(s) 1587
MseI TTAA 3 cut(s) 477, 510, 753
MslI CAYNNNNRTG 1 cut(s) 357
Msp20I TGGCCA 1 cut(s) 1587
MspA1I CMGCKG 3 cut(s) 1112, 1289, 1412
MspI CCGG 3 cut(s) 418, 561, 812
MspR9I CCNGG 7 cut(s) 220, 393, 402, 531, 669, 1041, 1362
MunI CAATTG 1 cut(s) 597
Mva1269I GAATGC 1 cut(s) 91
MvaI CCWGG 7 cut(s) 220, 393, 402, 531, 669, 1041, 1362
MvnI CGCG 2 cut(s) 53, 499
NcoI CCATGG 2 cut(s) 120, 969
NdeI CATATG 2 cut(s) 951, 1264
NdeII GATC 3 cut(s) 40, 797, 1483
NheI GCTAGC 1 cut(s) 115
NlaIV GGNNCC 6 cut(s) 429, 573, 705, 1002, 1038, 1516
NmeAIII GCCGAG 2 cut(s) 121, 1060
NmuCI GTSAC 2 cut(s) 64, 1547
NsiI ATGCAT 2 cut(s) 951, 1528
PagI TCATGA 1 cut(s) 352
PctI GAATGC 1 cut(s) 91
PdmI GAANNNNTTC 1 cut(s) 1393
PfeI GAWTC 2 cut(s) 578, 650
PflMI CCANNNNNTGG 1 cut(s) 1511
PfoI TCCNGGA 2 cut(s) 529, 1039
PinAI ACCGGT 1 cut(s) 811
PkrI GCNGC 9 cut(s) 184, 244, 309, 1086, 1143, 1411, 1471, 1474, 1568
PleI GAGTC 1 cut(s) 61
PpsI GAGTC 1 cut(s) 61
Ppu21I YACGTR 1 cut(s) 46
PpuMI RGGWCCY 2 cut(s) 805, 1037
PsiI TTATAA 1 cut(s) 1494
Psp124BI GAGCTC 1 cut(s) 505
Psp5II RGGWCCY 2 cut(s) 805, 1037
Psp6I CCWGG 7 cut(s) 218, 391, 400, 529, 667, 1039, 1360
PspEI GGTNACC 1 cut(s) 1547
PspFI CCCAGC 1 cut(s) 362
PspGI CCWGG 7 cut(s) 218, 391, 400, 529, 667, 1039, 1360
PspN4I GGNNCC 6 cut(s) 429, 573, 705, 1002, 1038, 1516
PspPI GGNCC 6 cut(s) 216, 524, 805, 1001, 1037, 1049
PspPPI RGGWCCY 2 cut(s) 805, 1037
PvuII CAGCTG 2 cut(s) 1112, 1412
RsaI GTAC 3 cut(s) 30, 48, 1067
RsaNI GTAC 3 cut(s) 29, 47, 1066
RseI CAYNNNNRTG 1 cut(s) 357
SacI GAGCTC 1 cut(s) 505
SaqAI TTAA 3 cut(s) 477, 510, 753
SatI GCNGC 9 cut(s) 183, 243, 308, 1085, 1142, 1410, 1470, 1473, 1567
Sau3AI GATC 3 cut(s) 40, 797, 1483
Sau96I GGNCC 6 cut(s) 216, 524, 805, 1001, 1037, 1049
SchI GAGTC 1 cut(s) 61
ScrFI CCNGG 7 cut(s) 220, 393, 402, 531, 669, 1041, 1362
SduI GDGCHC 4 cut(s) 226, 505, 978, 1453
SfaNI GCATC 8 cut(s) 349, 634, 687, 779, 902, 1153, 1261, 1535
SfiI GGCCNNNNNGGCC 1 cut(s) 397
SinI GGWCC 4 cut(s) 524, 805, 1001, 1037
SmiMI CAYNNNNRTG 1 cut(s) 357
SmlI CTYRAG 5 cut(s) 192, 252, 263, 657, 1008
SmoI CTYRAG 5 cut(s) 192, 252, 263, 657, 1008
Sse9I AATT 8 cut(s) 453, 597, 879, 888, 930, 1088, 1251, 1495
SsiI CCGC 7 cut(s) 51, 125, 922, 1124, 1142, 1289, 1566
SspMI CTAG 3 cut(s) 116, 1320, 1603
SstI GAGCTC 1 cut(s) 505
StyD4I CCNGG 7 cut(s) 218, 391, 400, 529, 667, 1039, 1360
StyI CCWWGG 4 cut(s) 120, 969, 1543, 1552
TaaI ACNGT 4 cut(s) 751, 779, 1333, 1375
TaiI ACGT 1 cut(s) 48
TaqI TCGA 2 cut(s) 689, 1440
TasI AATT 8 cut(s) 453, 597, 879, 888, 930, 1088, 1251, 1495
TatI WGTACW 2 cut(s) 28, 1065
TauI GCSGC 2 cut(s) 1144, 1569
TfiI GAWTC 2 cut(s) 578, 650
Tru1I TTAA 3 cut(s) 477, 510, 753
Tru9I TTAA 3 cut(s) 477, 510, 753
TseFI GTSAC 2 cut(s) 64, 1547
TseI GCWGC 7 cut(s) 182, 242, 307, 1084, 1409, 1469, 1472
Tsp45I GTSAC 2 cut(s) 64, 1547
TspDTI ATGAA 6 cut(s) 24, 369, 463, 608, 1178, 1423
TspGWI ACGGA 1 cut(s) 1507
Van91I CCANNNNNTGG 1 cut(s) 1511
VpaK11BI GGWCC 4 cut(s) 524, 805, 1001, 1037
XapI RAATTY 1 cut(s) 1251
XcmI CCANNNNNNNNNTGG 1 cut(s) 1559
XmnI GAANNNNTTC 1 cut(s) 1393
XspI CTAG 3 cut(s) 116, 1320, 1603
Zsp2I ATGCAT 2 cut(s) 951, 1528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.