Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0007394

Physical Location & Seq

Genomic Coordinates Reverse (-)

13358177 .. 13361873

Gene Structure 3697 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0161100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1089 bp

ATGGGAAACATGGGCAGTAGCAGAGGCAACTCCTCCCGCCGGAGACACCACCACAACCGCCAGAGCCACCCGTCTCCGCCGCCACCGGCCCCACCACAGCCCGAAATCTCCGCCAACCGCTACGTCTTCGCGGCCGCGACGCCGTACCCGGCTCAAAACCCGCCGCAATACCCGAACCCCAACCAGGCCCAGTATTACCAGTACCCGGGTTACTACCCGCCGGCGGCGCCACTGCCGGCGCCGTACGATCACCACCACCGGGTGCCGCATCCGCAGATGGAGGCGAATTGGGCCGGCGGGAGGTACCGGTGCGGGCCGGTAATGCAGGCTCCGACGCCGTACGTGGAGCACCAGAAGGCGGTGACGATAAGGAACGATGTGAATCTGAAGAAGGAGTCTTTGAGGGTTGAACCGGATGAGGAAAACCCCGGGAGCTTTCTGTTGTCTTTCACTTTTGATGCCACTGTTGCTGGGAGCATCACCATCATCTTCTTTGCAAAGGAAGGCGAGGACTGTAACCTGACACCAACGAAGTTTAACCTCCTTCCACCTGTGACGGTACACTTTCAACAAGGCCTGGGCCAGAAGTTCAAACAACCCCCTGGAACTGGAATTAACTTCTCAATGTTTGACGAGACAGAGTTACTGAAAGTAGCTGGCTTGGATATCTATCCTCTAGCAGTGAAGGCAGAGGCATCCCCACCTGAGCATGATGGATCAGAGGGAAACTCTGTATCTGTAGCAACGAACTCCCAGATAACTCAGGCTGTATTTGAGAGGGAGAAAGGTGAATTCCAGGTGAGGGTTGTCAAGCAGATTCTTTGGGTGAGTGGGATGAGGTATGAACTACAGGAGATATATGGAATTGGTAATTCAGTCGAGGATGACTTGGACGGGAACGATCCAGGAAAAGAATGCGTCATTTGCCTGTCTGAACCACGGGACACAACTGTTCTTCCATGTCGGCACATGTGTATGTGCAGTGGGTGTGCCAAGGTTTTGAGATACCAGACAAATCGATGTCCAATTTGCCGACAACCAGTTGAGAGGCTTTTGGAGATAAAGGTCAACAATGGTCCTGAGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008092 GO:0012505 GO:0016020 GO:0016021 GO:0017022 GO:0030133 GO:0031224 GO:0031410 GO:0031982 GO:0043226 GO:0043227 GO:0043229 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0097708

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Zein-binding

Protein Analysis

362

Amino Acids

40.34

Weight (kDa)

6.19

Isoelectric Point (pI)

46.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNF157-like_N	PF26192	127 - 283	1.1e-69	RNF157-like N-terminal domain
zf-C3HC4_3	PF13920	304 - 350	1.5e-16	Zinc finger, C3HC4 type (RING finger)
zf-RING_2	PF13639	305 - 345	4.1e-07	Ring finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007394)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06560
fragaria_vesca	FvH4_6g21080 FvH4_6g21080 FvH4_6g21080
malus_domestica	MD12G1046400.v1.1 MD14G1045000.v1.1
prunus_persica	Prupe.7G090000_v2.0.a1 Prupe.7G090000_v2.0.a1 Prupe.7G090000_v2.0.a1
pyrus_communis	pycom12g03990 pycom14g03820
rosa_chinensis	RchiOBHm_Chr3g0477461
rosa_laevigata	RLG00000023718
rosa_multiflora	Rmu_ssc0000341.1_g000011
rosa_roxburghii	Rroxscaffold_6G00403930 Rroxscaffold_6G00404610
rosa_rugosa	Rorug03G0161000 Rorug03G0161100 Rorug03G0161200 Rorug03G0161200
rosa_samantha	Rh3AG211300 Rh3BG244800 Rh3CG238600 Rh3DG238100
rosa_wichuraiana	Rw3G019150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	303
AccB1I	GGYRCC	4 cut(s)	226, 238, 262, 303
AccII	CGCG	2 cut(s)	131, 137
AclWI	GGATC	2 cut(s)	724, 896
AcoI	YGGCCR	1 cut(s)	132
AcsI	RAATTY	1 cut(s)	791
AcuI	CTGAAG	1 cut(s)	407
AcyI	GRCGYC	4 cut(s)	140, 227, 239, 335
AdeI	CACNNNGTG	1 cut(s)	262
AfaI	GTAC	6 cut(s)	146, 203, 245, 305, 341, 561
AfiI	CCNNNNNNNGG	9 cut(s)	39, 184, 205, 223, 259, 300, 358, 608, 802
AflIII	ACRYGT	1 cut(s)	969
AgeI	ACCGGT	1 cut(s)	306
AgsI	TTSAA	3 cut(s)	410, 569, 592
AjnI	CCWGG	5 cut(s)	183, 576, 601, 795, 904
AluBI	AGCT	2 cut(s)	435, 656
AluI	AGCT	2 cut(s)	435, 656
Alw21I	GWGCWC	1 cut(s)	351
Alw26I	GTCTC	3 cut(s)	37, 78, 629
AlwI	GGATC	2 cut(s)	724, 896
Ama87I	CYCGRG	2 cut(s)	205, 428
AoxI	GGCC	7 cut(s)	87, 132, 186, 291, 314, 574, 580
ApoI	RAATTY	1 cut(s)	791
AsiGI	ACCGGT	1 cut(s)	306
Asp718I	GGTACC	1 cut(s)	303
AspLEI	GCGC	2 cut(s)	229, 241
AspS9I	GGNCC	6 cut(s)	88, 187, 291, 314, 580, 1076
AsuC2I	CCSGG	6 cut(s)	149, 206, 207, 260, 429, 430
AsuHPI	GGTGA	6 cut(s)	242, 373, 472, 800, 811, 838
AvaI	CYCGRG	2 cut(s)	205, 428
AvaII	GGWCC	1 cut(s)	1076
AxyI	CCTNAGG	1 cut(s)	1080
BanI	GGYRCC	4 cut(s)	226, 238, 262, 303
BbsI	GAAGAC	1 cut(s)	118
Bbv12I	GWGCWC	1 cut(s)	351
BccI	CCATC	3 cut(s)	271, 491, 707
BceAI	ACGGC	3 cut(s)	127, 226, 322
BciT130I	CCWGG	5 cut(s)	185, 578, 603, 797, 906
BcnI	CCSGG	6 cut(s)	149, 206, 207, 260, 429, 430
BcoDI	GTCTC	3 cut(s)	37, 78, 629
BfaI	CTAG	1 cut(s)	677
BfmI	CTRYAG	2 cut(s)	738, 848
BfoI	RGCGCY	2 cut(s)	230, 242
BisI	GCNGC	6 cut(s)	80, 132, 135, 164, 225, 266
BlsI	GCNGC	6 cut(s)	81, 133, 136, 165, 226, 267
Bme18I	GGWCC	1 cut(s)	1076
BmeT110I	CYCGRG	2 cut(s)	205, 428
BmgT120I	GGNCC	6 cut(s)	88, 187, 291, 314, 580, 1076
BmiI	GGNNCC	6 cut(s)	90, 228, 240, 264, 305, 330
BmrI	ACTGGG	1 cut(s)	184
BmsI	GCATC	4 cut(s)	277, 448, 486, 704
BmuI	ACTGGG	1 cut(s)	184
BpiI	GAAGAC	1 cut(s)	118
BplI	GAGNNNNNCTC	2 cut(s)	713, 745
Bpu10I	CCTNAGC	1 cut(s)	705
BpuMI	CCSGG	6 cut(s)	149, 206, 207, 260, 429, 430
Bsa29I	ATCGAT	1 cut(s)	1018
BsaAI	YACGTR	1 cut(s)	343
BsaBI	GATNNNNATC	2 cut(s)	381, 669
BsaHI	GRCGYC	4 cut(s)	140, 227, 239, 335
BsaJI	CCNNGG	7 cut(s)	205, 427, 428, 577, 601, 938, 993
BsaWI	WCCGGW	2 cut(s)	306, 412
Bsc4I	CCNNNNNNNGG	9 cut(s)	39, 184, 205, 223, 259, 300, 358, 608, 802
Bse118I	RCCGGY	6 cut(s)	85, 220, 235, 293, 306, 316
Bse1I	ACTGG	4 cut(s)	190, 199, 613, 1040
Bse21I	CCTNAGG	1 cut(s)	1080
Bse8I	GATNNNNATC	2 cut(s)	381, 669
BseBI	CCWGG	5 cut(s)	185, 578, 603, 797, 906
BseCI	ATCGAT	1 cut(s)	1018
BseDI	CCNNGG	7 cut(s)	205, 427, 428, 577, 601, 938, 993
BseGI	GGATG	5 cut(s)	268, 421, 695, 840, 889
BseJI	GATNNNNATC	2 cut(s)	381, 669
BseLI	CCNNNNNNNGG	9 cut(s)	39, 184, 205, 223, 259, 300, 358, 608, 802
BseMII	CTCAG	3 cut(s)	696, 776, 1071
BseNI	ACTGG	4 cut(s)	190, 199, 613, 1040
BseRI	GAGGAG	1 cut(s)	22
BseX3I	CGGCCG	1 cut(s)	132
BseYI	CCCAGC	1 cut(s)	470
BsgI	GTGCAG	1 cut(s)	1000
Bsh1236I	CGCG	2 cut(s)	131, 137
Bsh1285I	CGRYCG	1 cut(s)	135
BshFI	GGCC	7 cut(s)	89, 134, 188, 293, 316, 576, 582
BshNI	GGYRCC	4 cut(s)	226, 238, 262, 303
BshTI	ACCGGT	1 cut(s)	306
BshVI	ATCGAT	1 cut(s)	1018
BsiEI	CGRYCG	1 cut(s)	135
BsiHKAI	GWGCWC	1 cut(s)	351
BsiHKCI	CYCGRG	2 cut(s)	205, 428
BsiWI	CGTACG	2 cut(s)	243, 339
BslFI	GGGAC	1 cut(s)	956
BslI	CCNNNNNNNGG	9 cut(s)	39, 184, 205, 223, 259, 300, 358, 608, 802
BsmAI	GTCTC	3 cut(s)	37, 78, 629
BsmBI	CGTCTC	1 cut(s)	78
BsmFI	GGGAC	1 cut(s)	956
BsmI	GAATGC	1 cut(s)	920
BsnI	GGCC	7 cut(s)	89, 134, 188, 293, 316, 576, 582
BsoBI	CYCGRG	2 cut(s)	205, 428
Bsp1286I	GDGCHC	1 cut(s)	351
Bsp143I	GATC	3 cut(s)	247, 716, 901
BspANI	GGCC	7 cut(s)	89, 134, 188, 293, 316, 576, 582
BspCNI	CTCAG	3 cut(s)	697, 775, 1072
BspDI	ATCGAT	1 cut(s)	1018
BspFNI	CGCG	2 cut(s)	131, 137
BspLI	GGNNCC	6 cut(s)	90, 228, 240, 264, 305, 330
BspPI	GGATC	2 cut(s)	724, 896
BspT107I	GGYRCC	4 cut(s)	226, 238, 262, 303
BsrFI	RCCGGY	6 cut(s)	85, 220, 235, 293, 306, 316
BsrI	ACTGG	4 cut(s)	190, 199, 613, 1040
BssAI	RCCGGY	6 cut(s)	85, 220, 235, 293, 306, 316
BssECI	CCNNGG	7 cut(s)	205, 427, 428, 577, 601, 938, 993
BssMI	GATC	3 cut(s)	247, 716, 901
BssNI	GRCGYC	4 cut(s)	140, 227, 239, 335
BssT1I	CCWWGG	1 cut(s)	993
Bst2UI	CCWGG	5 cut(s)	185, 578, 603, 797, 906
Bst4CI	ACNGT	4 cut(s)	466, 515, 559, 952
BstACI	GRCGYC	4 cut(s)	140, 227, 239, 335
BstBAI	YACGTR	1 cut(s)	343
BstC8I	GCNNGC	6 cut(s)	222, 237, 295, 314, 327, 658
BstDEI	CTNAG	3 cut(s)	705, 762, 1080
BstDSI	CCRYGG	1 cut(s)	938
BstF5I	GGATG	5 cut(s)	268, 421, 695, 840, 889
BstFNI	CGCG	2 cut(s)	131, 137
BstH2I	RGCGCY	2 cut(s)	230, 242
BstHHI	GCGC	2 cut(s)	229, 241
BstKTI	GATC	3 cut(s)	250, 719, 904
BstMAI	GTCTC	3 cut(s)	37, 78, 629
BstMBI	GATC	3 cut(s)	247, 716, 901
BstMCI	CGRYCG	1 cut(s)	135
BstMWI	GCNNNNNNNGC	7 cut(s)	226, 271, 290, 322, 467, 686, 924
BstNI	CCWGG	5 cut(s)	185, 578, 603, 797, 906
BstNSI	RCATGY	1 cut(s)	973
BstSFI	CTRYAG	2 cut(s)	738, 848
BstUI	CGCG	2 cut(s)	131, 137
BstV2I	GAAGAC	1 cut(s)	118
BstZI	CGGCCG	1 cut(s)	132
Bsu15I	ATCGAT	1 cut(s)	1018
Bsu36I	CCTNAGG	1 cut(s)	1080
BsuRI	GGCC	7 cut(s)	89, 134, 188, 293, 316, 576, 582
BsuTUI	ATCGAT	1 cut(s)	1018
BtgI	CCRYGG	1 cut(s)	938
BtsCI	GGATG	5 cut(s)	268, 421, 695, 840, 889
BtsI	GCAGTG	3 cut(s)	230, 687, 988
BtsIMutI	CAGTG	4 cut(s)	230, 462, 687, 988
Cac8I	GCNNGC	6 cut(s)	222, 237, 295, 314, 327, 658
CciNI	GCGGCCGC	1 cut(s)	132
CfoI	GCGC	2 cut(s)	229, 241
Cfr10I	RCCGGY	6 cut(s)	85, 220, 235, 293, 306, 316
Cfr13I	GGNCC	6 cut(s)	88, 187, 291, 314, 580, 1076
Cfr9I	CCCGGG	2 cut(s)	205, 428
ClaI	ATCGAT	1 cut(s)	1018
CseI	GACGC	3 cut(s)	148, 343, 907
Csp6I	GTAC	6 cut(s)	145, 202, 244, 304, 340, 560
CspAI	ACCGGT	1 cut(s)	306
CviAII	CATG	4 cut(s)	10, 710, 960, 970
CviQI	GTAC	6 cut(s)	145, 202, 244, 304, 340, 560
DdeI	CTNAG	3 cut(s)	705, 762, 1080
DinI	GGCGCC	2 cut(s)	228, 240
DpnI	GATC	3 cut(s)	249, 718, 903
DpnII	GATC	3 cut(s)	247, 716, 901
DraIII	CACNNNGTG	1 cut(s)	262
EaeI	YGGCCR	1 cut(s)	132
EagI	CGGCCG	1 cut(s)	132
EciI	GGCGGA	2 cut(s)	66, 100
EclXI	CGGCCG	1 cut(s)	132
Eco130I	CCWWGG	1 cut(s)	993
Eco147I	AGGCCT	1 cut(s)	576
Eco32I	GATATC	1 cut(s)	667
Eco47I	GGWCC	1 cut(s)	1076
Eco52I	CGGCCG	1 cut(s)	132
Eco57I	CTGAAG	1 cut(s)	407
Eco81I	CCTNAGG	1 cut(s)	1080
Eco88I	CYCGRG	2 cut(s)	205, 428
EcoRI	GAATTC	1 cut(s)	791
EcoRII	CCWGG	5 cut(s)	183, 576, 601, 795, 904
EcoRV	GATATC	1 cut(s)	667
EcoT14I	CCWWGG	1 cut(s)	993
EgeI	GGCGCC	2 cut(s)	228, 240
EheI	GGCGCC	2 cut(s)	228, 240
ErhI	CCWWGG	1 cut(s)	993
Esp3I	CGTCTC	1 cut(s)	78
FaeI	CATG	4 cut(s)	13, 713, 963, 973
FaiI	YATR	8 cut(s)	11, 711, 843, 859, 861, 961, 971, 977
FaqI	GGGAC	1 cut(s)	956
FatI	CATG	4 cut(s)	9, 709, 959, 969
FauI	CCCGC	5 cut(s)	44, 168, 225, 290, 305
Fnu4HI	GCNGC	6 cut(s)	80, 132, 135, 164, 225, 266
FokI	GGATG	5 cut(s)	255, 428, 682, 847, 896
Fsp4HI	GCNGC	6 cut(s)	80, 132, 135, 164, 225, 266
FspBI	CTAG	1 cut(s)	677
GlaI	GCGC	2 cut(s)	228, 240
GluI	GCNGC	6 cut(s)	80, 132, 135, 164, 225, 266
GsaI	CCCAGC	1 cut(s)	474
HaeII	RGCGCY	2 cut(s)	230, 242
HaeIII	GGCC	7 cut(s)	89, 134, 188, 293, 316, 576, 582
HgaI	GACGC	3 cut(s)	148, 343, 907
HhaI	GCGC	2 cut(s)	229, 241
Hin1I	GRCGYC	4 cut(s)	140, 227, 239, 335
Hin1II	CATG	4 cut(s)	13, 713, 963, 973
Hin6I	GCGC	2 cut(s)	227, 239
HinP1I	GCGC	2 cut(s)	227, 239
HincII	GTYRAC	1 cut(s)	1069
HindII	GTYRAC	1 cut(s)	1069
HinfI	GANTC	3 cut(s)	382, 395, 817
HphI	GGTGA	6 cut(s)	242, 373, 472, 800, 811, 838
Hpy166II	GTNNAC	2 cut(s)	562, 1069
Hpy188I	TCNGA	4 cut(s)	333, 387, 721, 934
Hpy188III	TCNNGA	1 cut(s)	1079
Hpy8I	GTNNAC	2 cut(s)	562, 1069
Hpy99I	CGWCG	2 cut(s)	142, 337
HpyAV	CCTTC	5 cut(s)	349, 385, 497, 554, 679
HpyCH4III	ACNGT	4 cut(s)	466, 515, 559, 952
HpyCH4IV	ACGT	2 cut(s)	123, 342
HpyCH4V	TGCA	3 cut(s)	325, 497, 981
HpyF10VI	GCNNNNNNNGC	7 cut(s)	226, 271, 290, 322, 467, 686, 924
HpyF3I	CTNAG	3 cut(s)	705, 762, 1080
HpySE526I	ACGT	2 cut(s)	123, 342
Hsp92I	GRCGYC	4 cut(s)	140, 227, 239, 335
Hsp92II	CATG	4 cut(s)	13, 713, 963, 973
HspAI	GCGC	2 cut(s)	227, 239
KasI	GGCGCC	2 cut(s)	226, 238
KpnI	GGTACC	1 cut(s)	307
KroI	GCCGGC	3 cut(s)	220, 235, 293
KroNI	GCCGGC	3 cut(s)	222, 237, 295
Kzo9I	GATC	3 cut(s)	247, 716, 901
LmnI	GCTCC	4 cut(s)	334, 346, 432, 474
LweI	GCATC	4 cut(s)	277, 448, 486, 704
MaeI	CTAG	1 cut(s)	677
MaeII	ACGT	2 cut(s)	123, 342
MaeIII	GTNAC	5 cut(s)	209, 361, 515, 553, 642
MalI	GATC	3 cut(s)	249, 718, 903
MboI	GATC	3 cut(s)	247, 716, 901
MboII	GAAGA	4 cut(s)	118, 400, 481, 947
MhlI	GDGCHC	1 cut(s)	351
MluCI	AATT	6 cut(s)	286, 612, 791, 864, 871, 1026
Mly113I	GGCGCC	2 cut(s)	227, 239
MlyI	GAGTC	1 cut(s)	404
MmeI	TCCRAC	1 cut(s)	356
MreI	CGCCGGCG	1 cut(s)	220
MroNI	GCCGGC	3 cut(s)	220, 235, 293
MseI	TTAA	2 cut(s)	537, 615
MslI	CAYNNNNRTG	1 cut(s)	974
Mva1269I	GAATGC	1 cut(s)	920
MvaI	CCWGG	5 cut(s)	185, 578, 603, 797, 906
MvnI	CGCG	2 cut(s)	131, 137
MwoI	GCNNNNNNNGC	7 cut(s)	226, 271, 290, 322, 467, 686, 924
NaeI	GCCGGC	3 cut(s)	222, 237, 295
NarI	GGCGCC	2 cut(s)	227, 239
NciI	CCSGG	6 cut(s)	149, 206, 207, 260, 429, 430
NdeII	GATC	3 cut(s)	247, 716, 901
NgoMIV	GCCGGC	3 cut(s)	220, 235, 293
NlaIII	CATG	4 cut(s)	13, 713, 963, 973
NlaIV	GGNNCC	6 cut(s)	90, 228, 240, 264, 305, 330
NmuCI	GTSAC	2 cut(s)	361, 553
NotI	GCGGCCGC	1 cut(s)	132
NspI	RCATGY	1 cut(s)	973
PceI	AGGCCT	1 cut(s)	576
PciI	ACATGT	1 cut(s)	969
PctI	GAATGC	1 cut(s)	920
PdiI	GCCGGC	3 cut(s)	222, 237, 295
PfeI	GAWTC	2 cut(s)	382, 817
Pfl23II	CGTACG	2 cut(s)	243, 339
PfoI	TCCNGGA	1 cut(s)	904
PinAI	ACCGGT	1 cut(s)	306
PkrI	GCNGC	6 cut(s)	81, 133, 136, 165, 226, 267
PleI	GAGTC	1 cut(s)	403
PluTI	GGCGCC	2 cut(s)	230, 242
PpsI	GAGTC	1 cut(s)	403
Ppu21I	YACGTR	1 cut(s)	343
PscI	ACATGT	1 cut(s)	969
Psp6I	CCWGG	5 cut(s)	183, 576, 601, 795, 904
PspFI	CCCAGC	1 cut(s)	470
PspGI	CCWGG	5 cut(s)	183, 576, 601, 795, 904
PspLI	CGTACG	2 cut(s)	243, 339
PspN4I	GGNNCC	6 cut(s)	90, 228, 240, 264, 305, 330
PspPI	GGNCC	6 cut(s)	88, 187, 291, 314, 580, 1076
RsaI	GTAC	6 cut(s)	146, 203, 245, 305, 341, 561
RsaNI	GTAC	6 cut(s)	145, 202, 244, 304, 340, 560
RseI	CAYNNNNRTG	1 cut(s)	974
SaqAI	TTAA	2 cut(s)	537, 615
SatI	GCNGC	6 cut(s)	80, 132, 135, 164, 225, 266
Sau3AI	GATC	3 cut(s)	247, 716, 901
Sau96I	GGNCC	6 cut(s)	88, 187, 291, 314, 580, 1076
SchI	GAGTC	1 cut(s)	404
SduI	GDGCHC	1 cut(s)	351
SfaNI	GCATC	4 cut(s)	277, 448, 486, 704
SfcI	CTRYAG	2 cut(s)	738, 848
SfoI	GGCGCC	2 cut(s)	228, 240
SgrAI	CRCCGGYG	1 cut(s)	220
SinI	GGWCC	1 cut(s)	1076
SmaI	CCCGGG	2 cut(s)	207, 430
SmiMI	CAYNNNNRTG	1 cut(s)	974
Sse9I	AATT	6 cut(s)	286, 612, 791, 864, 871, 1026
SseBI	AGGCCT	1 cut(s)	576
SspDI	GGCGCC	2 cut(s)	226, 238
SspMI	CTAG	1 cut(s)	677
StuI	AGGCCT	1 cut(s)	576
StyI	CCWWGG	1 cut(s)	993
TaaI	ACNGT	4 cut(s)	466, 515, 559, 952
TaiI	ACGT	2 cut(s)	126, 345
TaqI	TCGA	2 cut(s)	879, 1018
TasI	AATT	6 cut(s)	286, 612, 791, 864, 871, 1026
TauI	GCSGC	6 cut(s)	82, 134, 137, 166, 227, 268
TfiI	GAWTC	2 cut(s)	382, 817
Tru1I	TTAA	2 cut(s)	537, 615
Tru9I	TTAA	2 cut(s)	537, 615
TscAI	CASTG	4 cut(s)	237, 469, 687, 988
TseFI	GTSAC	2 cut(s)	361, 553
Tsp45I	GTSAC	2 cut(s)	361, 553
TspDTI	ATGAA	1 cut(s)	858
TspMI	CCCGGG	2 cut(s)	205, 428
TspRI	CASTG	4 cut(s)	237, 469, 687, 988
VpaK11BI	GGWCC	1 cut(s)	1076
XapI	RAATTY	1 cut(s)	791
XceI	RCATGY	1 cut(s)	973
XmaI	CCCGGG	2 cut(s)	205, 428
XspI	CTAG	1 cut(s)	677

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.