Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0018585

Physical Location & Seq

Genomic Coordinates Reverse (-)

21796718 .. 21804723

Gene Structure 8006 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0235600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2244 bp

ATGTGCTTGAAGGAATTTCTTGCATTGAAGAGTTGCATGCAAAACGTGCTTAGTAGTGGTTTGAGTGGGTCTGGTGCTCTATCACATGTTTATATTCCATATCTTCCCCTAAGATGCAATGTACCTGGATCTAGGGGTTTATTTTACGATGATGGAAATAAGTTGCTGCTTTCCCCAACATCAGATCAGGTCTTCTGTTGGAAAACTGTTCCTTTTGATCCTACGGTTGCTCCTACCTCTGATTCACTTACTGAAGGGCCCATCGTATCTATTCGATATTCCTTAGACTCGAAGTTTATAGCAGTCCAAAGATCTGATCAGGAGATACAATTTTGGGATAGAGGAAGTGGAGAAACATTTAGTCAGAGGTGCAAGTCTGAGTCGGAGAGTATACTGGGGTTCTTTTGGACAGATTGTCCCTTGTGTGATATTGTTTTTGTAAAGACCAGTGGGCTGGACTTATTTGCTTACAATTCGGAGTCAAAATCACTTCAATTGGTTGAGACAAGAAAATTGAATGTCAGTTGGTATGTTTATACACATGAAAGTCGCCTGGTTCTTCTTGCTTCTGGAATGCAGTGCAAAACCTTTACCGGTTTTCAGCTTTCATCTGCAGGGATTATTCGTTTGCCAAAGTTTGAGATGGCAATGGCTAAATCCGAGGCTAACAATAAGCCCGTCCTAGCTGCTGAAGATATTTTCATTGTCACTGTCTATGGTAGAATATATTGCCTGCAAGTTGATAGGATTGCAATGCTCCTCCATTCTTATAGGTTTTACCGCGATGTGGTGGTACAACAGGGTTCTTTGCCTATTTATTCAAGCAAGGTTGCTGTGAGTGTGGTTGATAATGTACTGCTTGTGCATCAAGTTGATGCGAAGGTTGTTATACTGTATGATATTTATGCTGATTCTCGAGCTCCCATATCTGCACCACTGCCTTTACTATTCAGGGGTTTCCCCAGGTCCAATTCTTCTTCGCTGCGATCAAATAGGGAAGATACTGAAAGTTCAGAAGTGAATATAAGTGATCATGAAGCAATCATCTATGGAGATGACTGGACATTTCTTGTACCTGACCTCATATTTTCTGTTTCTAATAAACTCTTATGGAAGATCCATTTAGATCTTGAGGCAATTTCTGCCAGTAGCTCAGAAGTACCATCAGTTCTAGAATTCTTGCAGCGGCGAAAGTTGGAGGCCAGTAAGGCTAAGCAGTTGTGCTTGTCAATAGCACGCACTGTTATTCTAGAACGGAGACCTGTGTCCACAGTTGCTAGGGCAATAGATGTTTTAGTTTCCTCTTATTCTCACTCTATTAAGACAGGAAATTATCTTAAGGGAACCAAAGCTGGGAAGACATTACCTACTGGCATGCCACACACAACTGGTCCTAAGTTAATTGCTGATTCATCTGCCAGTAGAGTAGATGCAATTGGAAAATCCATCAAGTATGAATCTTCTGCTGGAGTGGACAGTGAATCGCCTAATAGATTTTTAACCTTTTCAAATTCGGACTCTGAGGAGGATGCTAGCTTCTTTGATAGTAAAATAGACAGAGGGAAGTTAACCGGTGCTGAAACTTCTGTATCTGAAGCTCGGTCTTCATTGGTTAACAACCCATTGGATGCTAATCTTTCTGAGCAGCAAGAGTCTCAACTTACCTCTCCAGCAATTTCACCTGATGAAATGTACAGTTTTGTGTTTGCTCCTGTAGAGGAAGAGATGGTTGGAGAACCTTCTTACTTGGTTGCTATCATTGTTGAGTTTCTTCGCAGCGCTAATTTGGAAAAGGTTGAAGTCCGTCCTAATCTTTATGTCCTGACCATCCAATTGCTAGCGCGCAGTGAGCGATATGCAGAACTTGGGCTGTTTGTCTTAAACAAGATTCTTGAACCTTCTAAAGAAGTAGCGATGCAGCTCCTAGAGTCTGGCCGTCAGAATTCCCGGACAAGGAAGTTGGGTTTGGATATGCTAAGGCAGCTCTCTTTACATGAGGACTATGTACTGTTTCTAGTGCAAGAGGGATATTACCTTGAAGCATTACGGTATGCACGGAAGTATAAGGTCAATACCGTCAGAGCTTCACTGTTTCTTGAGGCAGCATTTATCTCCAATGATTCGCAGCATTTAGCTGCTGTCCTTAGATTCTTTACAGACTTCATTCCTGGCTTCAGAGACACATCCGATCACAACACTTACTACCGCATTCTCAGTGAGATGAACTCATACATTGCTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000159 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008287 GO:0009987 GO:0016311 GO:0019538 GO:0031974 GO:0031981 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0070013 GO:0071704 GO:1901564 GO:1902494 GO:1903293

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

747

Amino Acids

83.46

Weight (kDa)

5.74

Isoelectric Point (pI)

45.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RMC1_N	PF21029	47 - 164	8.4e-34	Regulator of MON1-CCZ1 complex, N-terminal
RMC1_C	PF07035	540 - 720	1.6e-50	Regulator of MON1-CCZ1 complex, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018585)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr3g0487681
rosa_laevigata	RLG00000021508 RLG00000022978
rosa_multiflora	Rmu_sc0002995.1_g000016
rosa_rugosa	Rorug03G0235500.1 Rorug03G0235600
rosa_samantha	Rh2AG580500 Rh2DG601900 Rh3CG318300
rosa_wichuraiana	Rw3G025150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	391
AccII	CGCG	2 cut(s)	783, 1843
AciI	CCGC	3 cut(s)	781, 1186, 2206
AclWI	GGATC	3 cut(s)	136, 212, 1111
AcoI	YGGCCR	1 cut(s)	1933
AcsI	RAATTY	4 cut(s)	14, 1175, 1510, 1942
AcuI	CTGAAG	4 cut(s)	273, 711, 1614, 2158
AfaI	GTAC	7 cut(s)	123, 795, 855, 1074, 1161, 1694, 2007
AfeI	AGCGCT	1 cut(s)	1780
AfiI	CCNNNNNNNGG	3 cut(s)	787, 1353, 1953
AflII	CTTAAG	1 cut(s)	1337
AflIII	ACRYGT	1 cut(s)	85
AgeI	ACCGGT	2 cut(s)	593, 1571
AgsI	TTSAA	9 cut(s)	10, 28, 494, 517, 822, 1509, 1799, 1895, 2039
AhdI	GACNNNNNGTC	1 cut(s)	414
AjnI	CCWGG	4 cut(s)	124, 552, 962, 2167
AjuI	GAANNNNNNNTTGG	4 cut(s)	1713, 1745, 1949, 1981
Alw21I	GWGCWC	2 cut(s)	79, 922
Alw26I	GTCTC	4 cut(s)	497, 1252, 1659, 2172
AlwI	GGATC	3 cut(s)	136, 212, 1111
Ama87I	CYCGRG	1 cut(s)	915
Aor51HI	AGCGCT	1 cut(s)	1780
AoxI	GGCC	3 cut(s)	257, 1200, 1933
ApaI	GGGCCC	1 cut(s)	261
ApoI	RAATTY	4 cut(s)	14, 1175, 1510, 1942
AsiGI	ACCGGT	2 cut(s)	593, 1571
AspLEI	GCGC	3 cut(s)	1781, 1843, 1845
AspS9I	GGNCC	4 cut(s)	257, 258, 966, 1391
AsuC2I	CCSGG	1 cut(s)	1948
AsuHPI	GGTGA	1 cut(s)	1671
AsuNHI	GCTAGC	2 cut(s)	1532, 1837
AvaI	CYCGRG	1 cut(s)	915
AvaII	GGWCC	2 cut(s)	966, 1391
BaeGI	GKGCMC	1 cut(s)	261
BaeI	ACNNNNGTAYC	2 cut(s)	1572, 1605
BanII	GRGCYC	2 cut(s)	261, 922
BbsI	GAAGAC	3 cut(s)	184, 1364, 1596
Bbv12I	GWGCWC	2 cut(s)	79, 922
BccI	CCATC	7 cut(s)	146, 269, 637, 1171, 1454, 1720, 1835
BceAI	ACGGC	1 cut(s)	1920
BciT130I	CCWGG	4 cut(s)	126, 554, 964, 2169
BclI	TGATCA	2 cut(s)	316, 1030
BcnI	CCSGG	1 cut(s)	1948
BcoDI	GTCTC	4 cut(s)	497, 1252, 1659, 2172
BfaI	CTAG	9 cut(s)	132, 683, 1172, 1250, 1278, 1533, 1838, 1925, 2015
BfmI	CTRYAG	2 cut(s)	612, 1713
BfoI	RGCGCY	1 cut(s)	1782
BfrI	CTTAAG	1 cut(s)	1337
BglI	GCCNNNNNGGC	1 cut(s)	1208
BglII	AGATCT	2 cut(s)	311, 1126
BlpI	GCTNAGC	1 cut(s)	1212
Bme1390I	CCNGG	5 cut(s)	126, 554, 964, 1948, 2169
Bme18I	GGWCC	2 cut(s)	966, 1391
BmeRI	GACNNNNNGTC	1 cut(s)	414
BmeT110I	CYCGRG	1 cut(s)	915
BmgT120I	GGNCC	4 cut(s)	257, 258, 966, 1391
BmiI	GGNNCC	2 cut(s)	259, 1345
BmrFI	CCNGG	5 cut(s)	126, 554, 964, 1948, 2169
BmrI	ACTGGG	1 cut(s)	404
BmsI	GCATC	7 cut(s)	104, 865, 874, 1420, 1519, 1618, 1905
BmtI	GCTAGC	2 cut(s)	1536, 1841
BmuI	ACTGGG	1 cut(s)	404
BoxI	GACNNNNGTC	1 cut(s)	1264
BpiI	GAAGAC	3 cut(s)	184, 1364, 1596
BplI	GAGNNNNNCTC	2 cut(s)	2210, 2242
BpmI	CTGGAG	2 cut(s)	1488, 1653
Bpu10I	CCTNAGC	1 cut(s)	1976
Bpu1102I	GCTNAGC	1 cut(s)	1212
BpuEI	CTTGAG	2 cut(s)	1151, 2117
BpuMI	CCSGG	1 cut(s)	1948
BsaBI	GATNNNNATC	1 cut(s)	1632
BsaI	GGTCTC	1 cut(s)	1252
BsaJI	CCNNGG	2 cut(s)	660, 962
BsaWI	WCCGGW	2 cut(s)	593, 1571
BsaXI	ACNNNNNCTCC	2 cut(s)	214, 244
Bsc4I	CCNNNNNNNGG	3 cut(s)	787, 1353, 1953
Bse118I	RCCGGY	2 cut(s)	593, 1571
Bse1I	ACTGG	8 cut(s)	399, 447, 1064, 1146, 1203, 1375, 1393, 1419
Bse3DI	GCAATG	4 cut(s)	124, 654, 759, 2232
Bse8I	GATNNNNATC	1 cut(s)	1632
BseBI	CCWGG	4 cut(s)	126, 554, 964, 2169
BseDI	CCNNGG	2 cut(s)	660, 962
BseGI	GGATG	4 cut(s)	1534, 1633, 1827, 2183
BseJI	GATNNNNATC	1 cut(s)	1632
BseLI	CCNNNNNNNGG	3 cut(s)	787, 1353, 1953
BseMI	GCAATG	4 cut(s)	124, 654, 759, 2232
BseMII	CTCAG	5 cut(s)	369, 1167, 1512, 1632, 2227
BseNI	ACTGG	8 cut(s)	399, 447, 1064, 1146, 1203, 1375, 1393, 1419
BsePI	GCGCGC	1 cut(s)	1841
BseRI	GAGGAG	2 cut(s)	749, 1538
BseSI	GKGCMC	1 cut(s)	261
BseYI	CCCAGC	1 cut(s)	1352
BsgI	GTGCAG	1 cut(s)	915
Bsh1236I	CGCG	2 cut(s)	783, 1843
BshFI	GGCC	3 cut(s)	259, 1202, 1935
BshTI	ACCGGT	2 cut(s)	593, 1571
BsiHKAI	GWGCWC	2 cut(s)	79, 922
BsiHKCI	CYCGRG	1 cut(s)	915
BsiSI	CCGG	3 cut(s)	594, 1572, 1948
BslFI	GGGAC	1 cut(s)	402
BslI	CCNNNNNNNGG	3 cut(s)	787, 1353, 1953
BsmAI	GTCTC	4 cut(s)	497, 1252, 1659, 2172
BsmFI	GGGAC	1 cut(s)	402
BsmI	GAATGC	2 cut(s)	579, 2208
BsnI	GGCC	3 cut(s)	259, 1202, 1935
Bso31I	GGTCTC	1 cut(s)	1252
BsoBI	CYCGRG	1 cut(s)	915
Bsp120I	GGGCCC	1 cut(s)	257
Bsp1286I	GDGCHC	3 cut(s)	79, 261, 922
Bsp1407I	TGTACA	1 cut(s)	1692
Bsp1720I	GCTNAGC	1 cut(s)	1212
BspACI	CCGC	3 cut(s)	781, 1186, 2206
BspANI	GGCC	3 cut(s)	259, 1202, 1935
BspCNI	CTCAG	5 cut(s)	370, 1166, 1513, 1633, 2226
BspFNI	CGCG	2 cut(s)	783, 1843
BspHI	TCATGA	1 cut(s)	1033
BspLI	GGNNCC	2 cut(s)	259, 1345
BspMAI	CTGCAG	1 cut(s)	616
BspOI	GCTAGC	2 cut(s)	1536, 1841
BspPI	GGATC	3 cut(s)	136, 212, 1111
BspTI	CTTAAG	1 cut(s)	1337
BspTNI	GGTCTC	1 cut(s)	1252
BsrDI	GCAATG	4 cut(s)	124, 654, 759, 2232
BsrFI	RCCGGY	2 cut(s)	593, 1571
BsrGI	TGTACA	1 cut(s)	1692
BsrI	ACTGG	8 cut(s)	399, 447, 1064, 1146, 1203, 1375, 1393, 1419
BssAI	RCCGGY	2 cut(s)	593, 1571
BssECI	CCNNGG	2 cut(s)	660, 962
BssHII	GCGCGC	1 cut(s)	1841
BssNAI	GTATAC	1 cut(s)	392
Bst1107I	GTATAC	1 cut(s)	392
Bst2UI	CCWGG	4 cut(s)	126, 554, 964, 2169
Bst6I	CTCTTC	2 cut(s)	23, 1716
BstAFI	CTTAAG	1 cut(s)	1337
BstAPI	GCANNNNNTGC	2 cut(s)	46, 1142
BstAUI	TGTACA	1 cut(s)	1692
BstC8I	GCNNGC	7 cut(s)	38, 734, 1237, 1376, 1534, 1839, 1843
BstF5I	GGATG	4 cut(s)	1534, 1633, 1827, 2183
BstFNI	CGCG	2 cut(s)	783, 1843
BstH2I	RGCGCY	1 cut(s)	1782
BstHHI	GCGC	3 cut(s)	1781, 1843, 1845
BstMAI	GTCTC	4 cut(s)	497, 1252, 1659, 2172
BstMWI	GCNNNNNNNGC	5 cut(s)	46, 1142, 1208, 1849, 1981
BstNI	CCWGG	4 cut(s)	126, 554, 964, 2169
BstNSI	RCATGY	3 cut(s)	40, 89, 1378
BstPAI	GACNNNNGTC	1 cut(s)	1264
BstSCI	CCNGG	5 cut(s)	124, 552, 962, 1946, 2167
BstSFI	CTRYAG	2 cut(s)	612, 1713
BstSLI	GKGCMC	1 cut(s)	261
BstUI	CGCG	2 cut(s)	783, 1843
BstV2I	GAAGAC	3 cut(s)	184, 1364, 1596
BstX2I	RGATCY	4 cut(s)	128, 311, 1116, 1126
BstXI	CCANNNNNNTGG	1 cut(s)	454
BstYI	RGATCY	4 cut(s)	128, 311, 1116, 1126
BstZ17I	GTATAC	1 cut(s)	392
BsuRI	GGCC	3 cut(s)	259, 1202, 1935
BtgZI	GCGATG	2 cut(s)	798, 1928
BtsCI	GGATG	4 cut(s)	1534, 1633, 1827, 2183
BtsI	GCAGTG	3 cut(s)	584, 935, 1852
BtsIMutI	CAGTG	9 cut(s)	454, 584, 708, 935, 1239, 1483, 1852, 2087, 2221
Cac8I	GCNNGC	7 cut(s)	38, 734, 1237, 1376, 1534, 1839, 1843
CciI	TCATGA	1 cut(s)	1033
CfoI	GCGC	3 cut(s)	1781, 1843, 1845
Cfr10I	RCCGGY	2 cut(s)	593, 1571
Cfr13I	GGNCC	4 cut(s)	257, 258, 966, 1391
Csp6I	GTAC	7 cut(s)	122, 794, 854, 1073, 1160, 1693, 2006
CspAI	ACCGGT	2 cut(s)	593, 1571
CviAII	CATG	6 cut(s)	37, 86, 542, 1034, 1375, 1994
CviQI	GTAC	7 cut(s)	122, 794, 854, 1073, 1160, 1693, 2006
DriI	GACNNNNNGTC	1 cut(s)	414
EaeI	YGGCCR	1 cut(s)	1933
Eam1104I	CTCTTC	2 cut(s)	23, 1716
Eam1105I	GACNNNNNGTC	1 cut(s)	414
EarI	CTCTTC	2 cut(s)	23, 1716
Ecl136II	GAGCTC	1 cut(s)	920
Eco24I	GRGCYC	2 cut(s)	261, 922
Eco31I	GGTCTC	1 cut(s)	1252
Eco47I	GGWCC	2 cut(s)	966, 1391
Eco47III	AGCGCT	1 cut(s)	1780
Eco53kI	GAGCTC	1 cut(s)	920
Eco57I	CTGAAG	4 cut(s)	273, 711, 1614, 2158
Eco88I	CYCGRG	1 cut(s)	915
EcoICRI	GAGCTC	1 cut(s)	920
EcoO109I	RGGNCCY	1 cut(s)	257
EcoRI	GAATTC	2 cut(s)	1175, 1942
EcoRII	CCWGG	4 cut(s)	124, 552, 962, 2167
EcoT38I	GRGCYC	2 cut(s)	261, 922
FaeI	CATG	6 cut(s)	40, 89, 545, 1037, 1378, 1997
FaqI	GGGAC	1 cut(s)	402
FatI	CATG	6 cut(s)	36, 85, 541, 1033, 1374, 1993
FbaI	TGATCA	2 cut(s)	316, 1030
FblI	GTMKAC	1 cut(s)	391
FokI	GGATG	4 cut(s)	1541, 1640, 1814, 2170
FriOI	GRGCYC	2 cut(s)	261, 922
FspBI	CTAG	9 cut(s)	132, 683, 1172, 1250, 1278, 1533, 1838, 1925, 2015
GlaI	GCGC	3 cut(s)	1780, 1842, 1844
GsaI	CCCAGC	1 cut(s)	1356
GsuI	CTGGAG	2 cut(s)	1488, 1653
HaeII	RGCGCY	1 cut(s)	1782
HaeIII	GGCC	3 cut(s)	259, 1202, 1935
HapII	CCGG	3 cut(s)	594, 1572, 1948
HhaI	GCGC	3 cut(s)	1781, 1843, 1845
Hin1II	CATG	6 cut(s)	40, 89, 545, 1037, 1378, 1997
Hin6I	GCGC	3 cut(s)	1779, 1841, 1843
HinP1I	GCGC	3 cut(s)	1779, 1841, 1843
HincII	GTYRAC	2 cut(s)	1569, 1615
HindII	GTYRAC	2 cut(s)	1569, 1615
HpaI	GTTAAC	2 cut(s)	1569, 1615
HpaII	CCGG	3 cut(s)	594, 1572, 1948
HphI	GGTGA	1 cut(s)	1671
Hpy166II	GTNNAC	5 cut(s)	392, 1269, 1474, 1569, 1615
Hpy8I	GTNNAC	5 cut(s)	392, 1269, 1474, 1569, 1615
HpyAV	CCTTC	5 cut(s)	4, 248, 874, 1749, 1908
HpyCH4IV	ACGT	1 cut(s)	45
HpyF10VI	GCNNNNNNNGC	5 cut(s)	46, 1142, 1208, 1849, 1981
HpySE526I	ACGT	1 cut(s)	45
Hsp92II	CATG	6 cut(s)	40, 89, 545, 1037, 1378, 1997
HspAI	GCGC	3 cut(s)	1779, 1841, 1843
Ksp22I	TGATCA	2 cut(s)	316, 1030
KspAI	GTTAAC	2 cut(s)	1569, 1615
LmnI	GCTCC	5 cut(s)	235, 762, 925, 1714, 1926
LweI	GCATC	7 cut(s)	104, 865, 874, 1420, 1519, 1618, 1905
MaeI	CTAG	9 cut(s)	132, 683, 1172, 1250, 1278, 1533, 1838, 1925, 2015
MaeII	ACGT	1 cut(s)	45
MaeIII	GTNAC	1 cut(s)	706
MfeI	CAATTG	3 cut(s)	494, 1434, 1832
MflI	RGATCY	4 cut(s)	128, 311, 1116, 1126
MhlI	GDGCHC	3 cut(s)	79, 261, 922
MlyI	GAGTC	6 cut(s)	281, 389, 488, 1511, 1661, 1937
MmeI	TCCRAC	4 cut(s)	179, 363, 1176, 1711
MseI	TTAA	8 cut(s)	1320, 1338, 1400, 1499, 1568, 1614, 1880, 2242
MspA1I	CMGCKG	1 cut(s)	1186
MspCI	CTTAAG	1 cut(s)	1337
MspI	CCGG	3 cut(s)	594, 1572, 1948
MspR9I	CCNGG	5 cut(s)	126, 554, 964, 1948, 2169
MunI	CAATTG	3 cut(s)	494, 1434, 1832
Mva1269I	GAATGC	2 cut(s)	579, 2208
MvaI	CCWGG	4 cut(s)	126, 554, 964, 2169
MvnI	CGCG	2 cut(s)	783, 1843
MwoI	GCNNNNNNNGC	5 cut(s)	46, 1142, 1208, 1849, 1981
NciI	CCSGG	1 cut(s)	1948
NheI	GCTAGC	2 cut(s)	1532, 1837
NlaIII	CATG	6 cut(s)	40, 89, 545, 1037, 1378, 1997
NlaIV	GGNNCC	2 cut(s)	259, 1345
NmuCI	GTSAC	1 cut(s)	706
NspI	RCATGY	3 cut(s)	40, 89, 1378
PaeI	GCATGC	2 cut(s)	40, 1378
PaeR7I	CTCGAG	1 cut(s)	915
PagI	TCATGA	1 cut(s)	1033
PauI	GCGCGC	1 cut(s)	1841
PciI	ACATGT	1 cut(s)	85
PctI	GAATGC	2 cut(s)	579, 2208
PfeI	GAWTC	8 cut(s)	242, 911, 1409, 1457, 1481, 1888, 2120, 2148
PfoI	TCCNGGA	1 cut(s)	1946
PinAI	ACCGGT	2 cut(s)	593, 1571
PleI	GAGTC	6 cut(s)	281, 388, 487, 1511, 1660, 1936
PpsI	GAGTC	6 cut(s)	281, 388, 487, 1511, 1660, 1936
PscI	ACATGT	1 cut(s)	85
PshAI	GACNNNNGTC	1 cut(s)	1264
Psp124BI	GAGCTC	1 cut(s)	922
Psp6I	CCWGG	4 cut(s)	124, 552, 962, 2167
PspFI	CCCAGC	1 cut(s)	1352
PspGI	CCWGG	4 cut(s)	124, 552, 962, 2167
PspN4I	GGNNCC	2 cut(s)	259, 1345
PspOMI	GGGCCC	1 cut(s)	257
PspPI	GGNCC	4 cut(s)	257, 258, 966, 1391
PsrI	GAACNNNNNNTAC	2 cut(s)	1152, 1184
PstI	CTGCAG	1 cut(s)	616
PsuI	RGATCY	4 cut(s)	128, 311, 1116, 1126
PteI	GCGCGC	1 cut(s)	1841
RsaI	GTAC	7 cut(s)	123, 795, 855, 1074, 1161, 1694, 2007
RsaNI	GTAC	7 cut(s)	122, 794, 854, 1073, 1160, 1693, 2006
SacI	GAGCTC	1 cut(s)	922
SaqAI	TTAA	8 cut(s)	1320, 1338, 1400, 1499, 1568, 1614, 1880, 2242
Sau96I	GGNCC	4 cut(s)	257, 258, 966, 1391
SchI	GAGTC	6 cut(s)	281, 389, 488, 1511, 1661, 1937
ScrFI	CCNGG	5 cut(s)	126, 554, 964, 1948, 2169
SduI	GDGCHC	3 cut(s)	79, 261, 922
SfaNI	GCATC	7 cut(s)	104, 865, 874, 1420, 1519, 1618, 1905
SfcI	CTRYAG	2 cut(s)	612, 1713
Sfr274I	CTCGAG	1 cut(s)	915
SinI	GGWCC	2 cut(s)	966, 1391
SlaI	CTCGAG	1 cut(s)	915
SmlI	CTYRAG	4 cut(s)	915, 1130, 1337, 2096
SmoI	CTYRAG	4 cut(s)	915, 1130, 1337, 2096
SphI	GCATGC	2 cut(s)	40, 1378
SsiI	CCGC	3 cut(s)	781, 1186, 2206
SspMI	CTAG	9 cut(s)	132, 683, 1172, 1250, 1278, 1533, 1838, 1925, 2015
SstI	GAGCTC	1 cut(s)	922
StyD4I	CCNGG	5 cut(s)	124, 552, 962, 1946, 2167
TaiI	ACGT	1 cut(s)	48
TaqI	TCGA	3 cut(s)	274, 290, 916
TaqII	GACCGA	1 cut(s)	1590
TatI	WGTACW	3 cut(s)	853, 1692, 2005
TauI	GCSGC	1 cut(s)	1189
TfiI	GAWTC	8 cut(s)	242, 911, 1409, 1457, 1481, 1888, 2120, 2148
Tru1I	TTAA	8 cut(s)	1320, 1338, 1400, 1499, 1568, 1614, 1880, 2242
Tru9I	TTAA	8 cut(s)	1320, 1338, 1400, 1499, 1568, 1614, 1880, 2242
TscAI	CASTG	9 cut(s)	454, 584, 715, 942, 1246, 1483, 1852, 2094, 2221
TseFI	GTSAC	1 cut(s)	706
Tsp45I	GTSAC	1 cut(s)	706
TspGWI	ACGGA	3 cut(s)	1270, 1793, 2071
TspRI	CASTG	9 cut(s)	454, 584, 715, 942, 1246, 1483, 1852, 2094, 2221
Vha464I	CTTAAG	1 cut(s)	1337
VpaK11BI	GGWCC	2 cut(s)	966, 1391
XapI	RAATTY	4 cut(s)	14, 1175, 1510, 1942
XbaI	TCTAGA	2 cut(s)	1171, 1249
XceI	RCATGY	3 cut(s)	40, 89, 1378
XhoI	CTCGAG	1 cut(s)	915
XmiI	GTMKAC	1 cut(s)	391
XspI	CTAG	9 cut(s)	132, 683, 1172, 1250, 1278, 1533, 1838, 1925, 2015

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.