Rorug04G0005300

F-box domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0014709
Physical Location & Seq
Reverse (-)
942733 .. 946953
4221 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0005300.1

Sequence Viewer

Length: 1875 bp
ATGCCATGTTCAAGATTGTTGATGTTCAGAAATTTTAGGAGAGTTTCAGAGTCGGTTGTTACAAGCCTGAAACCAAGCTATCCAGAACCCGGAAAGTATGGAACTATTACTAGAGTTGGCCTTGGTCTTCCCCAATACAGATTCTACACGGACTATATCTTGCCTACTAGAGGGAATAACGCATTATTACTGTTTAATAAAACAAAGAGGAATTATTCCAAGAGTGGTTCTGTCATGACACATCATACCCAACTTGCTTTGAAAAGGCTCTTCGAAAGATTCACTTTAAGTGGTTCTAGATTCCGTCCTGTGAGTAAGTTTGCTCAAGCAGTCGCCTTGTTCATAACTCGGCCTAACTTTTTACTGCCCGGTACTTTTGCCATCACAAGTGGGAAGCTAGCATGGGCACAGAGGTCTCTGGCAGAAATGGACCAGTCGCAGAATACTATATACATGCGTGCTCAAGATGGACATGCTTTTATGACATCATTACTATTGTCGGCTTTAGAAGGTGTGATATTGTTACTGAGAGCACTCTATCTGGGGATTTTGTTCTCACCCAGCATAGTGATGATGCCTTTCGTCGCTTACTGTGGACCTGAGTTTAGGAGATTGTGGCTTCATGTTGTTCATCGTACTTTGGAAAAAGCAGGTCCAGCTTTCATCAAATGGGGTCAGTGGGCTGCTACACGGCCTGATCTTTTCCCCAGAGACTTATGCATCAAGCTTTCAGAGCTTCACATGAAAGCTCCTGAACATAGCTTTGCCTACACAAAGAAAACTATCGAAGGAGCATTTGGACGCAAGCTCTCTGAGATTTTTGAGAACTTTGAAGAGGAGCCGGTAGCATCTGGAAGTATTGCTCAAGTGCATCGAGCTACTTTGAGATTTCGATACCCAAACCAAGAGGTGAAGCCCATGGTAGTTGCCGTAAAGGTCAGACATCCTGGTGTTAGTGAATCAATTAGGAGAGATTTTGTGATTATCAATTCAGTTGCAAAATTGTCAATGTTCATTCCTACTTTAAAGTGGTGGAGATTAGATGAAAGCGTACAGCAGTTCTCAGTTTTCATGATGTCTCAAGTTGATCTTGCAAGGGAAGCTGCCCATTTGAGCCGTTTTATCTATAATTTCCGTCATCATAAGGATGTCTCTTTTCCAAAGCCTTTGTATCCACTTGTGCATCCTGCTGTTTTGGTGGAAACTTATGAGCAAGGGGAATGTGTCTCAAACTATCTTCATGAGCTTCCCGGGCAAGATCAGATTAAAGCTGCAGTTGCTCACAGTGGAACAAAGGCATATTTAAAGATGCTTCTGGTGGACAACTATATACATGCGGACATGCATCCTGGAAATATCCTTGTCCGGGTGCCTCAGAGCAACTCTTTTTGGAAGAAACTCTTCAAGTTAAAGCCTCATGTCATTTTTCTTGATGTGGGCATGACTGCTGAACTCTCTAGAACTGACCAAGTAAATTTAGTTGGACTTTTCAAGGCTATCGCTCGTCGTGATGGAGGCACTGCCGCTGAGTGCACACTCAGACTATCTAATCAACAGAAATGCCCAAATCCGGAAGCTTTCATTGAGGAAATGAAGGAGGCCTTCACTTATTGGGGTAGTCCAGAAGGTGATCTGATCCATCCTGCTGAGTGCATGCATCAGGTACTGGAGAAAGTTAGGCGTCATAGAGTCAATGTTGATGGAAATGTCTGCACTGTCATGGTAACAACTTTGGTTCTTGAGGGATGGCAGAGGAAACTTGATCCTGCATACAATGTGATGAAAACATTGCAAATGTACGCTGGTTATCAAAACTCAAAACTCGAATGGGCAGAGTCCCTCTCCTACACTATTCAGGCGCTAATGGCTCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

624

Amino Acids

71.23

Weight (kDa)

9.57

Isoelectric Point (pI)

42.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC1 PF03109 246 - 508 7.9e-45 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014709)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g06280 FvH4_4g06280 FvH4_4g06280 FvH4_4g06280
malus_domestica MD16G1239800.v1.1
rosa_chinensis RchiOBHm_Chr4g0398001
rosa_laevigata RLG00000009391
rosa_multiflora Rmu_sc0003773.1_g000024
rosa_roxburghii Rroxscaffold_5G00342960
rosa_rugosa Rorug04G0005200 Rorug04G0005300
rosa_samantha Rh4AG081900 Rh4BG079600 Rh4CG089400 Rh4DG075000
rosa_wichuraiana Rw0G019320 Rw4G006830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 641
AccB1I GGYRCC 1 cut(s) 1369
AccIII TCCGGA 1 cut(s) 1570
AciI CCGC 2 cut(s) 1337, 1524
AclWI GGATC 2 cut(s) 1630, 1757
AcsI RAATTY 2 cut(s) 31, 1474
AcyI GRCGYC 1 cut(s) 1681
AfaI GTAC 5 cut(s) 373, 637, 1053, 1665, 1799
AfiI CCNNNNNNNGG 4 cut(s) 89, 170, 1366, 1570
AgsI TTSAA 5 cut(s) 12, 262, 833, 1405, 1492
AjnI CCWGG 2 cut(s) 946, 1348
AjuI GAANNNNNNNTTGG 2 cut(s) 780, 812
Alw21I GWGCWC 3 cut(s) 463, 535, 1535
Alw26I GTCTC 5 cut(s) 420, 705, 1083, 1156, 1231
Alw44I GTGCAC 1 cut(s) 1531
AlwI GGATC 2 cut(s) 1630, 1757
AlwNI CAGNNNCTG 1 cut(s) 1666
Ama87I CYCGRG 1 cut(s) 1250
Aor13HI TCCGGA 1 cut(s) 1570
AoxI GGCC 4 cut(s) 118, 350, 692, 1599
ApaLI GTGCAC 1 cut(s) 1531
ApeKI GCWGC 3 cut(s) 683, 1103, 1271
ApoI RAATTY 2 cut(s) 31, 1474
Asp700I GAANNNNTTC 1 cut(s) 1400
AspLEI GCGC 1 cut(s) 1861
AspS9I GGNCC 3 cut(s) 430, 596, 653
AsuC2I CCSGG 5 cut(s) 90, 369, 1251, 1252, 1367
AsuHPI GGTGA 3 cut(s) 549, 922, 1640
AsuII TTCGAA 1 cut(s) 273
AsuNHI GCTAGC 1 cut(s) 397
AvaI CYCGRG 1 cut(s) 1250
AvaII GGWCC 3 cut(s) 430, 596, 653
BaeGI GKGCMC 2 cut(s) 409, 1535
BanI GGYRCC 1 cut(s) 1369
BbsI GAAGAC 1 cut(s) 119
Bbv12I GWGCWC 3 cut(s) 463, 535, 1535
BbvI GCAGC 3 cut(s) 670, 1090, 1258
BccI CCATC 6 cut(s) 389, 461, 1505, 1647, 1694, 1740
BceAI ACGGC 3 cut(s) 707, 914, 1101
BciT130I CCWGG 2 cut(s) 948, 1350
BciVI GTATCC 1 cut(s) 1182
BcnI CCSGG 5 cut(s) 90, 369, 1251, 1252, 1367
BcoDI GTCTC 5 cut(s) 420, 705, 1083, 1156, 1231
BfaI CTAG 5 cut(s) 111, 168, 297, 398, 1458
BfmI CTRYAG 1 cut(s) 1272
BfoI RGCGCY 1 cut(s) 1862
BfuAI ACCTGC 1 cut(s) 641
BfuI GTATCC 1 cut(s) 1182
BisI GCNGC 4 cut(s) 684, 1104, 1272, 1524
BlsI GCNGC 4 cut(s) 685, 1105, 1273, 1525
Bme1390I CCNGG 7 cut(s) 90, 369, 948, 1251, 1252, 1350, 1367
Bme18I GGWCC 3 cut(s) 430, 596, 653
BmeT110I CYCGRG 1 cut(s) 1250
BmgT120I GGNCC 3 cut(s) 430, 596, 653
BmiI GGNNCC 3 cut(s) 840, 1371, 1869
BmrFI CCNGG 7 cut(s) 90, 369, 948, 1251, 1252, 1350, 1367
BmsI GCATC 8 cut(s) 564, 729, 857, 880, 1192, 1299, 1354, 1666
BmtI GCTAGC 1 cut(s) 401
BpiI GAAGAC 1 cut(s) 119
BplI GAGNNNNNCTC 2 cut(s) 1826, 1858
BpmI CTGGAG 1 cut(s) 1688
Bpu14I TTCGAA 1 cut(s) 273
BpuEI CTTGAG 5 cut(s) 309, 447, 849, 1065, 1760
BpuMI CCSGG 5 cut(s) 90, 369, 1251, 1252, 1367
BsaHI GRCGYC 1 cut(s) 1681
BsaI GGTCTC 1 cut(s) 420
BsaJI CCNNGG 3 cut(s) 121, 918, 1250
BsaWI WCCGGW 1 cut(s) 1570
Bsc4I CCNNNNNNNGG 4 cut(s) 89, 170, 1366, 1570
Bse118I RCCGGY 1 cut(s) 841
Bse1I ACTGG 2 cut(s) 433, 1671
Bse3DI GCAATG 1 cut(s) 1787
BseAI TCCGGA 1 cut(s) 1570
BseBI CCWGG 2 cut(s) 948, 1350
BseDI CCNNGG 3 cut(s) 121, 918, 1250
BseGI GGATG 6 cut(s) 943, 1153, 1183, 1345, 1639, 1751
BseLI CCNNNNNNNGG 4 cut(s) 89, 170, 1366, 1570
BseMI GCAATG 1 cut(s) 1787
BseMII CTCAG 8 cut(s) 518, 591, 804, 1077, 1388, 1518, 1552, 1638
BseNI ACTGG 2 cut(s) 433, 1671
BseRI GAGGAG 1 cut(s) 851
BseSI GKGCMC 2 cut(s) 409, 1535
BseXI GCAGC 3 cut(s) 670, 1090, 1258
BseYI CCCAGC 1 cut(s) 560
BsgI GTGCAG 1 cut(s) 1696
BshFI GGCC 4 cut(s) 120, 352, 694, 1601
BshNI GGYRCC 1 cut(s) 1369
BsiHKAI GWGCWC 3 cut(s) 463, 535, 1535
BsiHKCI CYCGRG 1 cut(s) 1250
BsiSI CCGG 6 cut(s) 90, 369, 842, 1251, 1366, 1571
BslFI GGGAC 1 cut(s) 1822
BslI CCNNNNNNNGG 4 cut(s) 89, 170, 1366, 1570
BsmAI GTCTC 5 cut(s) 420, 705, 1083, 1156, 1231
BsmFI GGGAC 1 cut(s) 1822
BsnI GGCC 4 cut(s) 120, 352, 694, 1601
Bso31I GGTCTC 1 cut(s) 420
BsoBI CYCGRG 1 cut(s) 1250
Bsp119I TTCGAA 1 cut(s) 273
Bsp1286I GDGCHC 4 cut(s) 409, 463, 535, 1535
Bsp13I TCCGGA 1 cut(s) 1570
Bsp143I GATC 6 cut(s) 697, 1087, 1258, 1630, 1635, 1762
Bsp19I CCATGG 1 cut(s) 918
BspACI CCGC 2 cut(s) 1337, 1524
BspANI GGCC 4 cut(s) 120, 352, 694, 1601
BspCNI CTCAG 8 cut(s) 519, 592, 805, 1076, 1387, 1519, 1551, 1639
BspEI TCCGGA 1 cut(s) 1570
BspHI TCATGA 3 cut(s) 234, 1071, 1240
BspLI GGNNCC 3 cut(s) 840, 1371, 1869
BspMAI CTGCAG 1 cut(s) 1276
BspMI ACCTGC 1 cut(s) 641
BspOI GCTAGC 1 cut(s) 401
BspPI GGATC 2 cut(s) 1630, 1757
BspQI GCTCTTC 1 cut(s) 275
BspT104I TTCGAA 1 cut(s) 273
BspT107I GGYRCC 1 cut(s) 1369
BspTNI GGTCTC 1 cut(s) 420
BsrDI GCAATG 1 cut(s) 1787
BsrFI RCCGGY 1 cut(s) 841
BsrI ACTGG 2 cut(s) 433, 1671
BssAI RCCGGY 1 cut(s) 841
BssECI CCNNGG 3 cut(s) 121, 918, 1250
BssMI GATC 6 cut(s) 697, 1087, 1258, 1630, 1635, 1762
BssNI GRCGYC 1 cut(s) 1681
BssT1I CCWWGG 2 cut(s) 121, 918
Bst2UI CCWGG 2 cut(s) 948, 1350
Bst4CI ACNGT 4 cut(s) 192, 593, 1286, 1717
Bst6I CTCTTC 3 cut(s) 275, 828, 1406
BstACI GRCGYC 1 cut(s) 1681
BstBI TTCGAA 1 cut(s) 273
BstC8I GCNNGC 4 cut(s) 399, 459, 806, 1655
BstDEI CTNAG 8 cut(s) 527, 600, 813, 1063, 1374, 1527, 1538, 1647
BstDSI CCRYGG 1 cut(s) 918
BstENI CCTNNNNNAGG 1 cut(s) 168
BstF5I GGATG 6 cut(s) 943, 1153, 1183, 1345, 1639, 1751
BstH2I RGCGCY 1 cut(s) 1862
BstHHI GCGC 1 cut(s) 1861
BstKTI GATC 6 cut(s) 700, 1090, 1261, 1633, 1638, 1765
BstMAI GTCTC 5 cut(s) 420, 705, 1083, 1156, 1231
BstMBI GATC 6 cut(s) 697, 1087, 1258, 1630, 1635, 1762
BstMWI GCNNNNNNNGC 6 cut(s) 656, 733, 1100, 1252, 1277, 1865
BstNI CCWGG 2 cut(s) 948, 1350
BstNSI RCATGY 5 cut(s) 457, 476, 1337, 1345, 1657
BstSCI CCNGG 7 cut(s) 88, 367, 946, 1249, 1250, 1348, 1365
BstSFI CTRYAG 1 cut(s) 1272
BstSLI GKGCMC 2 cut(s) 409, 1535
BstV1I GCAGC 3 cut(s) 670, 1090, 1258
BstV2I GAAGAC 1 cut(s) 119
BsuI GTATCC 1 cut(s) 1182
BsuRI GGCC 4 cut(s) 120, 352, 694, 1601
BtgI CCRYGG 1 cut(s) 918
BtsCI GGATG 6 cut(s) 943, 1153, 1183, 1345, 1639, 1751
BtsI GCAGTG 1 cut(s) 1518
BtsIMutI CAGTG 4 cut(s) 683, 1291, 1518, 1713
BveI ACCTGC 1 cut(s) 641
Cac8I GCNNGC 4 cut(s) 399, 459, 806, 1655
CaiI CAGNNNCTG 1 cut(s) 1666
CciI TCATGA 3 cut(s) 234, 1071, 1240
CfoI GCGC 1 cut(s) 1861
Cfr10I RCCGGY 1 cut(s) 841
Cfr13I GGNCC 3 cut(s) 430, 596, 653
Cfr9I CCCGGG 1 cut(s) 1250
CseI GACGC 2 cut(s) 810, 1670
Csp6I GTAC 5 cut(s) 372, 636, 1052, 1664, 1798
CviQI GTAC 5 cut(s) 372, 636, 1052, 1664, 1798
DdeI CTNAG 8 cut(s) 527, 600, 813, 1063, 1374, 1527, 1538, 1647
DpnI GATC 6 cut(s) 699, 1089, 1260, 1632, 1637, 1764
DpnII GATC 6 cut(s) 697, 1087, 1258, 1630, 1635, 1762
DraI TTTAAA 2 cut(s) 1026, 1305
Eam1104I CTCTTC 3 cut(s) 275, 828, 1406
EarI CTCTTC 3 cut(s) 275, 828, 1406
Eco130I CCWWGG 2 cut(s) 121, 918
Eco147I AGGCCT 1 cut(s) 1601
Eco31I GGTCTC 1 cut(s) 420
Eco47I GGWCC 3 cut(s) 430, 596, 653
Eco88I CYCGRG 1 cut(s) 1250
EcoNI CCTNNNNNAGG 1 cut(s) 168
EcoRII CCWGG 2 cut(s) 946, 1348
EcoT14I CCWWGG 2 cut(s) 121, 918
EcoT22I ATGCAT 3 cut(s) 722, 1347, 1659
ErhI CCWWGG 2 cut(s) 121, 918
FalI AAGNNNNNCTT 8 cut(s) 268, 300, 1074, 1106, 1385, 1417, 1586, 1618
FaqI GGGAC 1 cut(s) 1822
Fnu4HI GCNGC 4 cut(s) 684, 1104, 1272, 1524
FokI GGATG 6 cut(s) 930, 1160, 1170, 1332, 1626, 1758
Fsp4HI GCNGC 4 cut(s) 684, 1104, 1272, 1524
FspBI CTAG 5 cut(s) 111, 168, 297, 398, 1458
GlaI GCGC 1 cut(s) 1860
GluI GCNGC 4 cut(s) 684, 1104, 1272, 1524
GsaI CCCAGC 1 cut(s) 564
GsuI CTGGAG 1 cut(s) 1688
HaeII RGCGCY 1 cut(s) 1862
HaeIII GGCC 4 cut(s) 120, 352, 694, 1601
HapII CCGG 6 cut(s) 90, 369, 842, 1251, 1366, 1571
HgaI GACGC 2 cut(s) 810, 1670
HhaI GCGC 1 cut(s) 1861
Hin1I GRCGYC 1 cut(s) 1681
Hin6I GCGC 1 cut(s) 1859
HinP1I GCGC 1 cut(s) 1859
HindIII AAGCTT 2 cut(s) 725, 1575
HinfI GANTC 7 cut(s) 50, 141, 279, 300, 959, 1689, 1835
HpaII CCGG 6 cut(s) 90, 369, 842, 1251, 1366, 1571
HphI GGTGA 3 cut(s) 549, 922, 1640
Hpy166II GTNNAC 3 cut(s) 596, 1321, 1533
Hpy188I TCNGA 9 cut(s) 29, 49, 733, 814, 941, 1263, 1377, 1541, 1635
Hpy8I GTNNAC 3 cut(s) 596, 1321, 1533
Hpy99I CGWCG 2 cut(s) 587, 1509
HpyAV CCTTC 5 cut(s) 503, 782, 1588, 1612, 1619
HpyCH4III ACNGT 4 cut(s) 192, 593, 1286, 1717
HpyF10VI GCNNNNNNNGC 6 cut(s) 656, 733, 1100, 1252, 1277, 1865
HpyF3I CTNAG 8 cut(s) 527, 600, 813, 1063, 1374, 1527, 1538, 1647
Hsp92I GRCGYC 1 cut(s) 1681
HspAI GCGC 1 cut(s) 1859
Kpn2I TCCGGA 1 cut(s) 1570
Kzo9I GATC 6 cut(s) 697, 1087, 1258, 1630, 1635, 1762
LguI GCTCTTC 1 cut(s) 275
LmnI GCTCC 4 cut(s) 754, 791, 838, 1873
Lsp1109I GCAGC 3 cut(s) 670, 1090, 1258
LweI GCATC 8 cut(s) 564, 729, 857, 880, 1192, 1299, 1354, 1666
MaeI CTAG 5 cut(s) 111, 168, 297, 398, 1458
MaeIII GTNAC 3 cut(s) 58, 522, 1723
MalI GATC 6 cut(s) 699, 1089, 1260, 1632, 1637, 1764
MboI GATC 6 cut(s) 697, 1087, 1258, 1630, 1635, 1762
MboII GAAGA 6 cut(s) 119, 262, 845, 1229, 1393, 1405
MhlI GDGCHC 4 cut(s) 409, 463, 535, 1535
MluCI AATT 7 cut(s) 31, 211, 963, 988, 1001, 1129, 1474
MlyI GAGTC 3 cut(s) 59, 1698, 1844
MmeI TCCRAC 1 cut(s) 1462
Mph1103I ATGCAT 3 cut(s) 722, 1347, 1659
MroI TCCGGA 1 cut(s) 1570
MroXI GAANNNNTTC 1 cut(s) 1400
MseI TTAA 6 cut(s) 195, 287, 1025, 1266, 1304, 1409
MslI CAYNNNNRTG 4 cut(s) 569, 948, 1146, 1718
MspA1I CMGCKG 1 cut(s) 1526
MspI CCGG 6 cut(s) 90, 369, 842, 1251, 1366, 1571
MspR9I CCNGG 7 cut(s) 90, 369, 948, 1251, 1252, 1350, 1367
MvaI CCWGG 2 cut(s) 948, 1350
MwoI GCNNNNNNNGC 6 cut(s) 656, 733, 1100, 1252, 1277, 1865
NciI CCSGG 5 cut(s) 90, 369, 1251, 1252, 1367
NcoI CCATGG 1 cut(s) 918
NdeII GATC 6 cut(s) 697, 1087, 1258, 1630, 1635, 1762
NheI GCTAGC 1 cut(s) 397
NlaIV GGNNCC 3 cut(s) 840, 1371, 1869
NmeAIII GCCGAG 1 cut(s) 328
NsiI ATGCAT 3 cut(s) 722, 1347, 1659
NspI RCATGY 5 cut(s) 457, 476, 1337, 1345, 1657
NspV TTCGAA 1 cut(s) 273
PaeI GCATGC 1 cut(s) 1657
PagI TCATGA 3 cut(s) 234, 1071, 1240
PceI AGGCCT 1 cut(s) 1601
PciSI GCTCTTC 1 cut(s) 275
PdmI GAANNNNTTC 1 cut(s) 1400
PfeI GAWTC 4 cut(s) 141, 279, 300, 959
PfoI TCCNGGA 1 cut(s) 1348
PkrI GCNGC 4 cut(s) 685, 1105, 1273, 1525
PleI GAGTC 3 cut(s) 58, 1697, 1843
PpsI GAGTC 3 cut(s) 58, 1697, 1843
Psp6I CCWGG 2 cut(s) 946, 1348
PspFI CCCAGC 1 cut(s) 560
PspGI CCWGG 2 cut(s) 946, 1348
PspN4I GGNNCC 3 cut(s) 840, 1371, 1869
PspPI GGNCC 3 cut(s) 430, 596, 653
PstI CTGCAG 1 cut(s) 1276
PstNI CAGNNNCTG 1 cut(s) 1666
RsaI GTAC 5 cut(s) 373, 637, 1053, 1665, 1799
RsaNI GTAC 5 cut(s) 372, 636, 1052, 1664, 1798
RseI CAYNNNNRTG 4 cut(s) 569, 948, 1146, 1718
SapI GCTCTTC 1 cut(s) 275
SaqAI TTAA 6 cut(s) 195, 287, 1025, 1266, 1304, 1409
SatI GCNGC 4 cut(s) 684, 1104, 1272, 1524
Sau3AI GATC 6 cut(s) 697, 1087, 1258, 1630, 1635, 1762
Sau96I GGNCC 3 cut(s) 430, 596, 653
SchI GAGTC 3 cut(s) 59, 1698, 1844
ScrFI CCNGG 7 cut(s) 90, 369, 948, 1251, 1252, 1350, 1367
SduI GDGCHC 4 cut(s) 409, 463, 535, 1535
SfaNI GCATC 8 cut(s) 564, 729, 857, 880, 1192, 1299, 1354, 1666
SfcI CTRYAG 1 cut(s) 1272
SfuI TTCGAA 1 cut(s) 273
SinI GGWCC 3 cut(s) 430, 596, 653
SmaI CCCGGG 1 cut(s) 1252
SmiMI CAYNNNNRTG 4 cut(s) 569, 948, 1146, 1718
SmlI CTYRAG 5 cut(s) 324, 462, 864, 1080, 1739
SmoI CTYRAG 5 cut(s) 324, 462, 864, 1080, 1739
SphI GCATGC 1 cut(s) 1657
Sse9I AATT 7 cut(s) 31, 211, 963, 988, 1001, 1129, 1474
SseBI AGGCCT 1 cut(s) 1601
SsiI CCGC 2 cut(s) 1337, 1524
SspMI CTAG 5 cut(s) 111, 168, 297, 398, 1458
StuI AGGCCT 1 cut(s) 1601
StyD4I CCNGG 7 cut(s) 88, 367, 946, 1249, 1250, 1348, 1365
StyI CCWWGG 2 cut(s) 121, 918
TaaI ACNGT 4 cut(s) 192, 593, 1286, 1717
TaqI TCGA 5 cut(s) 273, 786, 874, 892, 1824
TasI AATT 7 cut(s) 31, 211, 963, 988, 1001, 1129, 1474
TauI GCSGC 1 cut(s) 1526
TfiI GAWTC 4 cut(s) 141, 279, 300, 959
Tru1I TTAA 6 cut(s) 195, 287, 1025, 1266, 1304, 1409
Tru9I TTAA 6 cut(s) 195, 287, 1025, 1266, 1304, 1409
TscAI CASTG 4 cut(s) 683, 1291, 1525, 1720
TseI GCWGC 3 cut(s) 683, 1103, 1271
TspGWI ACGGA 3 cut(s) 164, 293, 1124
TspMI CCCGGG 1 cut(s) 1250
TspRI CASTG 4 cut(s) 683, 1291, 1525, 1720
VneI GTGCAC 1 cut(s) 1531
VpaK11BI GGWCC 3 cut(s) 430, 596, 653
XagI CCTNNNNNAGG 1 cut(s) 168
XapI RAATTY 2 cut(s) 31, 1474
XbaI TCTAGA 2 cut(s) 296, 1457
XceI RCATGY 5 cut(s) 457, 476, 1337, 1345, 1657
XmaI CCCGGG 1 cut(s) 1250
XmnI GAANNNNTTC 1 cut(s) 1400
XspI CTAG 5 cut(s) 111, 168, 297, 398, 1458
Zsp2I ATGCAT 3 cut(s) 722, 1347, 1659
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.