Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0015181

Physical Location & Seq

Genomic Coordinates Reverse (-)

7844799 .. 7847041

Gene Structure 2243 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0051000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGGCTGACATCCGTTTTGAGGCTGAGGAGGCAGGGCTCCAGATGGATTCGAGCCTCGTGGCGTTGGGGACTGCAGGGGCTGCAGCGTTTCAGGATGGGAACTGGTACATGGTGGGCCGTTTGTTGGTGCCGAAAGCAAGGCTGCCCGGCTTCAAGGGTACTATTTCCACGATCTGGAATATCCGATCAGGGCTGACCATTCAGGATGCAGGGGAGCGCTTTGTGTTCCAATTTGAGAATGAAGGTGTGCGCAACCGGATCTTGCGTGGAGGCCCTTGGTTTTATCGGAATACTATGCTGGTGGTGGGAGAATACGATGGCCTCAGTCCGGTGGAGGAGGTGCCTCTAAATCTGTTGGAGGCCTGGGTAGCTGTGAAGGGGCTTCCTTTTGCTCTGAGGAACAAGACGGCGCTGGCCATGGTGGGTGCCTCTTTGGGGATGATGGTTCGAGTGGATCACAACGCTTTGAAGAGGAAAGAAGAAGAACAGCGCATCAAGGTGGTGTTTGATGTTCGGCGTCGGGTCCGGGTCTGGAAGGTGTTTGAGTTCTCACCGGTGGTGAGACCGGAGTTAACCTTCATCTTCGAGAAGGTTAAGGGTTTTTGCCGGGACTGTGGGCTTTTTGTTCATGATGCCACTGGTTGTGACAAGCTCTTAATCCGAGAGAAGGAGGAACTCCAAACTGGATGTACGGCAGTAGCCATGGCCGGGTTATCGTTGAACTCGGGGACAGAGACTGGTTTTTTCTTGAAGGACAAGTCTCTGTGTTTGAGCACTGCCGATCTGGAGGTTGGGTCGGGGTCTGTTGGACAAGGTGTCTTGGTGGTAGCTGGTGGGACGGGCGACCATGCACCGTCGACAACTGTCGAGTTCATGCCTTCCATGTTGTCTGGTATACCTAGGGTTTTGGAACCAGTGATCCACACCATGGAGAACTTGAAGCTGAGGGCTCCAATGCTGGTTGTTCCGCAGGAGATCGCCTCGGAGTCCGCGACTTTGATCCCTAGGTTATCTGCGACAGGTACCGAGGGTTCAAGAATGGAGTTTTCATCCATGCAATTGGTCCCGGTGGGGAGAAAGAGAAAGGCTGCATTTTATTTGGATCGCCTTGGGAAGAAGTACTTAACTTTCCCCGAGTCGAAGCTGGAGGTTGGGGAGAGTGTCTCTTTGATTGTCCAACACAAGAATGGTAAGCTTCTGGTCTCACCAAAGAAGAAGAAAGGGGGACGTCCTAAGGGAAGCAAAAATAAGATTAAGCATGCAGATGAACAAGCAGTGAAGAAGATACGTAAGTATAAGCGTAGAGGGAAAATTTTGAATTCTGATTCCTCAAGGGAAGCGTTGGATACTGCCACTGTGGAGGAGGTAGGGCCTATGCAGATGGGGGCAGATGAGGTTGTGAAGGAGCTCCCGGTTATGGAGGGAGAGCTGGAAGATAATGCTAAACGAATAAATAACTTGAAGAAGCTGGAAAACGTTCTGATTAAGAAAAATGGTGAAAGACGTGAGTCCTGGGGCCATGATGATATGAAAGAAGATGACTATAGGTCTCCAGAGACTGACTGTGGCTCTAAACCACTCATCGAATCAATGATTTACCAGAGGATCTTCACAACAAGTGAAGGGATCCAGAGAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0006629 GO:0006723 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009058 GO:0009555 GO:0009987 GO:0010025 GO:0010166 GO:0012505 GO:0016020 GO:0016491 GO:0019953 GO:0022412 GO:0022414 GO:0030154 GO:0031984 GO:0032501 GO:0032502 GO:0032504 GO:0042175 GO:0042335 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043446 GO:0043447 GO:0044237 GO:0044238 GO:0044249 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048235 GO:0048609 GO:0048856 GO:0048869 GO:0051704 GO:0055046 GO:0055114 GO:0071704 GO:0071944 GO:0098827 GO:1901568 GO:1901570 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FA_hydroxylase Wax2_C

Protein Analysis

546

Amino Acids

60.6

Weight (kDa)

9.09

Isoelectric Point (pI)

41.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF4283	PF14111	35 - 103	5e-08	Domain of unknown function (DUF4283)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015181)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57800
fragaria_vesca	FvH4_4g10190
malus_domestica	MD13G1273200.v1.1
prunus_persica	Prupe.1G098000_v2.0.a1
pyrus_communis	pycom13g28860
rosa_chinensis	RchiOBHm_Chr4g0404991
rosa_laevigata	RLG00000008887
rosa_multiflora	Rmu_ssc0000127.1_g000007
rosa_roxburghii	Rroxscaffold_5G00349160
rosa_rugosa	Rorug04G0051000 Rorug04G0051100
rosa_samantha	Rh4AG126700 Rh4BG120900 Rh4CG134900 Rh4DG121200
rosa_wichuraiana	Rw4G010300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1231
Acc16I	TGCGCA	1 cut(s)	251
Acc65I	GGTACC	1 cut(s)	1022
AccB1I	GGYRCC	4 cut(s)	127, 340, 425, 1022
AccB7I	CCANNNNNTGG	2 cut(s)	174, 928
AccI	GTMKAC	2 cut(s)	857, 895
AccII	CGCG	1 cut(s)	992
AciI	CCGC	2 cut(s)	968, 990
AclI	AACGTT	1 cut(s)	1476
AclWI	GGATC	8 cut(s)	266, 462, 913, 994, 1110, 1613, 1621, 1634
AcoI	YGGCCR	2 cut(s)	414, 705
AcsI	RAATTY	2 cut(s)	1311, 1318
AcyI	GRCGYC	2 cut(s)	517, 1228
AfaI	GTAC	5 cut(s)	107, 160, 691, 1024, 1121
AfeI	AGCGCT	1 cut(s)	218
AfiI	CCNNNNNNNGG	9 cut(s)	19, 124, 174, 328, 435, 667, 708, 928, 1417
AgeI	ACCGGT	1 cut(s)	553
AgsI	TTSAA	8 cut(s)	154, 469, 721, 751, 940, 1035, 1318, 1462
AhdI	GACNNNNNGTC	2 cut(s)	815, 1546
AjiI	CACGTC	1 cut(s)	1505
AjnI	CCWGG	2 cut(s)	362, 1511
AloI	GAACNNNNNNTCC	2 cut(s)	903, 935
AluBI	AGCT	9 cut(s)	371, 652, 830, 943, 1144, 1195, 1408, 1429, 1468
AluI	AGCT	9 cut(s)	371, 652, 830, 943, 1144, 1195, 1408, 1429, 1468
Alw21I	GWGCWC	2 cut(s)	776, 1410
Alw26I	GTCTC	7 cut(s)	556, 728, 765, 1168, 1207, 1550, 1554
AlwI	GGATC	8 cut(s)	266, 462, 913, 994, 1110, 1613, 1621, 1634
AlwNI	CAGNNNCTG	3 cut(s)	80, 737, 1559
Ama87I	CYCGRG	2 cut(s)	724, 1133
Aor51HI	AGCGCT	1 cut(s)	218
AoxI	GGCC	8 cut(s)	115, 271, 319, 360, 414, 705, 1370, 1516
ApeKI	GCWGC	4 cut(s)	80, 83, 142, 1088
ApoI	RAATTY	2 cut(s)	1311, 1318
ArsI	GACNNNNNNTTYG	1 cut(s)	31
AsiGI	ACCGGT	1 cut(s)	553
Asp700I	GAANNNNTTC	1 cut(s)	1476
Asp718I	GGTACC	1 cut(s)	1022
AspA2I	CCTAGG	2 cut(s)	899, 1004
AspLEI	GCGC	4 cut(s)	219, 252, 412, 492
AspS9I	GGNCC	6 cut(s)	115, 272, 523, 1063, 1370, 1516
AsuC2I	CCSGG	6 cut(s)	147, 527, 608, 709, 1067, 1412
AsuHPI	GGTGA	4 cut(s)	543, 571, 1197, 1508
AvaI	CYCGRG	2 cut(s)	724, 1133
AvaII	GGWCC	2 cut(s)	523, 1063
AvrII	CCTAGG	2 cut(s)	899, 1004
AxyI	CCTNAGG	1 cut(s)	1233
BaeI	ACNNNNGTAYC	2 cut(s)	1277, 1310
BalI	TGGCCA	1 cut(s)	416
BamHI	GGATCC	1 cut(s)	1626
BanI	GGYRCC	4 cut(s)	127, 340, 425, 1022
BanII	GRGCYC	3 cut(s)	39, 952, 1410
BauI	CACGAG	1 cut(s)	56
Bbv12I	GWGCWC	2 cut(s)	776, 1410
BbvCI	CCTCAGC	2 cut(s)	24, 944
BbvI	GCAGC	4 cut(s)	67, 95, 129, 1075
BccI	CCATC	5 cut(s)	37, 89, 311, 436, 1375
BceAI	ACGGC	3 cut(s)	102, 423, 708
BciT130I	CCWGG	2 cut(s)	364, 1513
BciVI	GTATCC	1 cut(s)	1339
BcnI	CCSGG	6 cut(s)	147, 527, 608, 709, 1067, 1412
BcoDI	GTCTC	7 cut(s)	556, 728, 765, 1168, 1207, 1550, 1554
BfaI	CTAG	2 cut(s)	900, 1005
BfmI	CTRYAG	3 cut(s)	72, 81, 1543
BfoI	RGCGCY	2 cut(s)	220, 413
BfuI	GTATCC	1 cut(s)	1339
BisI	GCNGC	4 cut(s)	81, 84, 143, 1089
BlnI	CCTAGG	2 cut(s)	899, 1004
BlsI	GCNGC	4 cut(s)	82, 85, 144, 1090
BmcAI	AGTACT	1 cut(s)	1121
Bme1390I	CCNGG	8 cut(s)	147, 364, 527, 608, 709, 1067, 1412, 1513
Bme18I	GGWCC	2 cut(s)	523, 1063
BmeRI	GACNNNNNGTC	2 cut(s)	815, 1546
BmeT110I	CYCGRG	2 cut(s)	724, 1133
BmgBI	CACGTC	1 cut(s)	1505
BmgT120I	GGNCC	6 cut(s)	115, 272, 523, 1063, 1370, 1516
BmrFI	CCNGG	8 cut(s)	147, 364, 527, 608, 709, 1067, 1412, 1513
BmsI	GCATC	3 cut(s)	196, 501, 622
BoxI	GACNNNNGTC	2 cut(s)	863, 1507
BplI	GAGNNNNNCTC	4 cut(s)	965, 997, 1148, 1180
BpmI	CTGGAG	4 cut(s)	23, 806, 1166, 1536
Bpu10I	CCTNAGC	2 cut(s)	24, 944
BpuEI	CTTGAG	1 cut(s)	1315
BpuMI	CCSGG	6 cut(s)	147, 527, 608, 709, 1067, 1412
BsaAI	YACGTR	1 cut(s)	1289
BsaHI	GRCGYC	2 cut(s)	517, 1228
BsaI	GGTCTC	3 cut(s)	556, 1207, 1554
BsaWI	WCCGGW	4 cut(s)	255, 328, 553, 565
BsaXI	ACNNNNNCTCC	2 cut(s)	779, 809
Bsc4I	CCNNNNNNNGG	9 cut(s)	19, 124, 174, 328, 435, 667, 708, 928, 1417
Bse118I	RCCGGY	1 cut(s)	553
Bse1I	ACTGG	5 cut(s)	107, 643, 688, 742, 914
Bse21I	CCTNAGG	1 cut(s)	1233
BseBI	CCWGG	2 cut(s)	364, 1513
BseGI	GGATG	6 cut(s)	9, 100, 211, 444, 692, 1049
BseLI	CCNNNNNNNGG	9 cut(s)	19, 124, 174, 328, 435, 667, 708, 928, 1417
BseMII	CTCAG	4 cut(s)	15, 337, 386, 935
BseNI	ACTGG	5 cut(s)	107, 643, 688, 742, 914
BseRI	GAGGAG	3 cut(s)	41, 350, 1376
BseXI	GCAGC	4 cut(s)	67, 95, 129, 1075
Bsh1236I	CGCG	1 cut(s)	992
BshFI	GGCC	8 cut(s)	117, 273, 321, 362, 416, 707, 1372, 1518
BshNI	GGYRCC	4 cut(s)	127, 340, 425, 1022
BshTI	ACCGGT	1 cut(s)	553
BsiHKAI	GWGCWC	2 cut(s)	776, 1410
BsiHKCI	CYCGRG	2 cut(s)	724, 1133
BslFI	GGGAC	6 cut(s)	82, 623, 742, 850, 1049, 1239
BslI	CCNNNNNNNGG	9 cut(s)	19, 124, 174, 328, 435, 667, 708, 928, 1417
BsmAI	GTCTC	7 cut(s)	556, 728, 765, 1168, 1207, 1550, 1554
BsmFI	GGGAC	6 cut(s)	82, 623, 742, 850, 1049, 1239
BsnI	GGCC	8 cut(s)	117, 273, 321, 362, 416, 707, 1372, 1518
Bso31I	GGTCTC	3 cut(s)	556, 1207, 1554
BsoBI	CYCGRG	2 cut(s)	724, 1133
Bsp1286I	GDGCHC	4 cut(s)	39, 776, 952, 1410
Bsp19I	CCATGG	3 cut(s)	417, 702, 927
BspACI	CCGC	2 cut(s)	968, 990
BspANI	GGCC	8 cut(s)	117, 273, 321, 362, 416, 707, 1372, 1518
BspCNI	CTCAG	4 cut(s)	16, 336, 387, 936
BspFNI	CGCG	1 cut(s)	992
BspHI	TCATGA	1 cut(s)	628
BspMAI	CTGCAG	2 cut(s)	76, 85
BspPI	GGATC	8 cut(s)	266, 462, 913, 994, 1110, 1613, 1621, 1634
BspT107I	GGYRCC	4 cut(s)	127, 340, 425, 1022
BspTNI	GGTCTC	3 cut(s)	556, 1207, 1554
BsrFI	RCCGGY	1 cut(s)	553
BsrI	ACTGG	5 cut(s)	107, 643, 688, 742, 914
BssAI	RCCGGY	1 cut(s)	553
BssNAI	GTATAC	1 cut(s)	896
BssNI	GRCGYC	2 cut(s)	517, 1228
BssSI	CACGAG	1 cut(s)	56
BssT1I	CCWWGG	7 cut(s)	275, 417, 702, 899, 927, 1004, 1108
Bst1107I	GTATAC	1 cut(s)	896
Bst2BI	CACGAG	1 cut(s)	56
Bst2UI	CCWGG	2 cut(s)	364, 1513
Bst4CI	ACNGT	5 cut(s)	614, 855, 865, 1357, 1565
Bst6I	CTCTTC	1 cut(s)	464
BstACI	GRCGYC	2 cut(s)	517, 1228
BstAPI	GCANNNNNTGC	1 cut(s)	80
BstBAI	YACGTR	1 cut(s)	1289
BstC8I	GCNNGC	2 cut(s)	414, 1260
BstDEI	CTNAG	5 cut(s)	24, 323, 395, 944, 1233
BstDSI	CCRYGG	3 cut(s)	417, 702, 927
BstF5I	GGATG	6 cut(s)	9, 100, 211, 444, 692, 1049
BstFNI	CGCG	1 cut(s)	992
BstH2I	RGCGCY	2 cut(s)	220, 413
BstHHI	GCGC	4 cut(s)	219, 252, 412, 492
BstMAI	GTCTC	7 cut(s)	556, 728, 765, 1168, 1207, 1550, 1554
BstMWI	GCNNNNNNNGC	3 cut(s)	29, 80, 368
BstNI	CCWGG	2 cut(s)	364, 1513
BstNSI	RCATGY	1 cut(s)	1262
BstPAI	GACNNNNGTC	2 cut(s)	863, 1507
BstSCI	CCNGG	8 cut(s)	145, 362, 525, 606, 707, 1065, 1410, 1511
BstSFI	CTRYAG	3 cut(s)	72, 81, 1543
BstSNI	TACGTA	1 cut(s)	1289
BstUI	CGCG	1 cut(s)	992
BstV1I	GCAGC	4 cut(s)	67, 95, 129, 1075
BstX2I	RGATCY	3 cut(s)	258, 1605, 1626
BstXI	CCANNNNNNTGG	1 cut(s)	1060
BstYI	RGATCY	3 cut(s)	258, 1605, 1626
BstZ17I	GTATAC	1 cut(s)	896
Bsu36I	CCTNAGG	1 cut(s)	1233
BsuI	GTATCC	1 cut(s)	1339
BsuRI	GGCC	8 cut(s)	117, 273, 321, 362, 416, 707, 1372, 1518
BtgI	CCRYGG	3 cut(s)	417, 702, 927
BtrI	CACGTC	1 cut(s)	1505
BtsCI	GGATG	6 cut(s)	9, 100, 211, 444, 692, 1049
BtsI	GCAGTG	2 cut(s)	774, 1281
BtsIMutI	CAGTG	5 cut(s)	636, 774, 921, 1281, 1353
Cac8I	GCNNGC	2 cut(s)	414, 1260
CaiI	CAGNNNCTG	3 cut(s)	80, 737, 1559
CciI	TCATGA	1 cut(s)	628
CfoI	GCGC	4 cut(s)	219, 252, 412, 492
Cfr10I	RCCGGY	1 cut(s)	553
Cfr13I	GGNCC	6 cut(s)	115, 272, 523, 1063, 1370, 1516
CseI	GACGC	1 cut(s)	506
Csp6I	GTAC	5 cut(s)	106, 159, 690, 1023, 1120
CspAI	ACCGGT	1 cut(s)	553
CviQI	GTAC	5 cut(s)	106, 159, 690, 1023, 1120
DdeI	CTNAG	5 cut(s)	24, 323, 395, 944, 1233
DriI	GACNNNNNGTC	2 cut(s)	815, 1546
EaeI	YGGCCR	2 cut(s)	414, 705
Eam1104I	CTCTTC	1 cut(s)	464
Eam1105I	GACNNNNNGTC	2 cut(s)	815, 1546
EarI	CTCTTC	1 cut(s)	464
Ecl136II	GAGCTC	1 cut(s)	1408
Eco105I	TACGTA	1 cut(s)	1289
Eco130I	CCWWGG	7 cut(s)	275, 417, 702, 899, 927, 1004, 1108
Eco147I	AGGCCT	1 cut(s)	362
Eco24I	GRGCYC	3 cut(s)	39, 952, 1410
Eco31I	GGTCTC	3 cut(s)	556, 1207, 1554
Eco47I	GGWCC	2 cut(s)	523, 1063
Eco47III	AGCGCT	1 cut(s)	218
Eco53kI	GAGCTC	1 cut(s)	1408
Eco81I	CCTNAGG	1 cut(s)	1233
Eco88I	CYCGRG	2 cut(s)	724, 1133
EcoICRI	GAGCTC	1 cut(s)	1408
EcoO109I	RGGNCCY	2 cut(s)	272, 1370
EcoRI	GAATTC	1 cut(s)	1318
EcoRII	CCWGG	2 cut(s)	362, 1511
EcoT14I	CCWWGG	7 cut(s)	275, 417, 702, 899, 927, 1004, 1108
EcoT38I	GRGCYC	3 cut(s)	39, 952, 1410
ErhI	CCWWGG	7 cut(s)	275, 417, 702, 899, 927, 1004, 1108
FalI	AAGNNNNNCTT	2 cut(s)	1106, 1138
FaqI	GGGAC	6 cut(s)	82, 623, 742, 850, 1049, 1239
FblI	GTMKAC	2 cut(s)	857, 895
Fnu4HI	GCNGC	4 cut(s)	81, 84, 143, 1089
FokI	GGATG	5 cut(s)	107, 218, 451, 699, 1036
FriOI	GRGCYC	3 cut(s)	39, 952, 1410
Fsp4HI	GCNGC	4 cut(s)	81, 84, 143, 1089
FspBI	CTAG	2 cut(s)	900, 1005
FspI	TGCGCA	1 cut(s)	251
GlaI	GCGC	4 cut(s)	218, 251, 411, 491
GluI	GCNGC	4 cut(s)	81, 84, 143, 1089
GsuI	CTGGAG	4 cut(s)	23, 806, 1166, 1536
HaeII	RGCGCY	2 cut(s)	220, 413
HaeIII	GGCC	8 cut(s)	117, 273, 321, 362, 416, 707, 1372, 1518
HgaI	GACGC	1 cut(s)	506
HhaI	GCGC	4 cut(s)	219, 252, 412, 492
Hin1I	GRCGYC	2 cut(s)	517, 1228
Hin6I	GCGC	4 cut(s)	217, 250, 410, 490
HinP1I	GCGC	4 cut(s)	217, 250, 410, 490
HincII	GTYRAC	2 cut(s)	573, 858
HindII	GTYRAC	2 cut(s)	573, 858
HindIII	AAGCTT	1 cut(s)	1193
HinfI	GANTC	6 cut(s)	47, 986, 1136, 1325, 1508, 1586
HpaI	GTTAAC	1 cut(s)	573
HphI	GGTGA	4 cut(s)	543, 571, 1197, 1508
Hpy166II	GTNNAC	3 cut(s)	573, 858, 896
Hpy188I	TCNGA	7 cut(s)	185, 288, 396, 662, 985, 1324, 1482
Hpy8I	GTNNAC	3 cut(s)	573, 858, 896
Hpy99I	CGWCG	2 cut(s)	522, 859
HpyCH4III	ACNGT	5 cut(s)	614, 855, 865, 1357, 1565
HpyCH4IV	ACGT	4 cut(s)	1228, 1288, 1476, 1504
HpyCH4V	TGCA	8 cut(s)	74, 83, 209, 851, 1057, 1091, 1262, 1378
HpyF10VI	GCNNNNNNNGC	3 cut(s)	29, 80, 368
HpyF3I	CTNAG	5 cut(s)	24, 323, 395, 944, 1233
HpySE526I	ACGT	4 cut(s)	1228, 1288, 1476, 1504
Hsp92I	GRCGYC	2 cut(s)	517, 1228
HspAI	GCGC	4 cut(s)	217, 250, 410, 490
KpnI	GGTACC	1 cut(s)	1026
KspAI	GTTAAC	1 cut(s)	573
LmnI	GCTCC	5 cut(s)	42, 214, 955, 1405, 1413
Lsp1109I	GCAGC	4 cut(s)	67, 95, 129, 1075
LweI	GCATC	3 cut(s)	196, 501, 622
MaeI	CTAG	2 cut(s)	900, 1005
MaeII	ACGT	4 cut(s)	1228, 1288, 1476, 1504
MaeIII	GTNAC	1 cut(s)	644
MfeI	CAATTG	1 cut(s)	1058
MflI	RGATCY	3 cut(s)	258, 1605, 1626
MhlI	GDGCHC	4 cut(s)	39, 776, 952, 1410
MlsI	TGGCCA	1 cut(s)	416
MluCI	AATT	4 cut(s)	230, 1058, 1311, 1318
MluNI	TGGCCA	1 cut(s)	416
MlyI	GAGTC	3 cut(s)	995, 1145, 1517
MmeI	TCCRAC	4 cut(s)	336, 787, 1201, 1323
Mox20I	TGGCCA	1 cut(s)	416
MroXI	GAANNNNTTC	1 cut(s)	1476
MscI	TGGCCA	1 cut(s)	416
MseI	TTAA	6 cut(s)	572, 594, 656, 1124, 1254, 1485
MslI	CAYNNNNRTG	3 cut(s)	497, 1185, 1263
Msp20I	TGGCCA	1 cut(s)	416
MspR9I	CCNGG	8 cut(s)	147, 364, 527, 608, 709, 1067, 1412, 1513
MunI	CAATTG	1 cut(s)	1058
MvaI	CCWGG	2 cut(s)	364, 1513
MvnI	CGCG	1 cut(s)	992
MwoI	GCNNNNNNNGC	3 cut(s)	29, 80, 368
NciI	CCSGG	6 cut(s)	147, 527, 608, 709, 1067, 1412
NcoI	CCATGG	3 cut(s)	417, 702, 927
NmuCI	GTSAC	1 cut(s)	644
NsbI	TGCGCA	1 cut(s)	251
NspI	RCATGY	1 cut(s)	1262
PaeI	GCATGC	1 cut(s)	1262
PagI	TCATGA	1 cut(s)	628
PceI	AGGCCT	1 cut(s)	362
PcsI	WCGNNNNNNNCGW	1 cut(s)	989
PdmI	GAANNNNTTC	1 cut(s)	1476
PfeI	GAWTC	3 cut(s)	47, 1325, 1586
PflMI	CCANNNNNTGG	2 cut(s)	174, 928
PinAI	ACCGGT	1 cut(s)	553
PkrI	GCNGC	4 cut(s)	82, 85, 144, 1090
PleI	GAGTC	3 cut(s)	994, 1144, 1516
PpsI	GAGTC	3 cut(s)	994, 1144, 1516
Ppu21I	YACGTR	1 cut(s)	1289
PshAI	GACNNNNGTC	2 cut(s)	863, 1507
Psp124BI	GAGCTC	1 cut(s)	1410
Psp1406I	AACGTT	1 cut(s)	1476
Psp6I	CCWGG	2 cut(s)	362, 1511
PspGI	CCWGG	2 cut(s)	362, 1511
PspPI	GGNCC	6 cut(s)	115, 272, 523, 1063, 1370, 1516
PsrI	GAACNNNNNNTAC	2 cut(s)	1015, 1047
PstI	CTGCAG	2 cut(s)	76, 85
PstNI	CAGNNNCTG	3 cut(s)	80, 737, 1559
PsuI	RGATCY	3 cut(s)	258, 1605, 1626
RsaI	GTAC	5 cut(s)	107, 160, 691, 1024, 1121
RsaNI	GTAC	5 cut(s)	106, 159, 690, 1023, 1120
RseI	CAYNNNNRTG	3 cut(s)	497, 1185, 1263
SacI	GAGCTC	1 cut(s)	1410
SalI	GTCGAC	1 cut(s)	856
SaqAI	TTAA	6 cut(s)	572, 594, 656, 1124, 1254, 1485
SatI	GCNGC	4 cut(s)	81, 84, 143, 1089
Sau96I	GGNCC	6 cut(s)	115, 272, 523, 1063, 1370, 1516
ScaI	AGTACT	1 cut(s)	1121
SchI	GAGTC	3 cut(s)	995, 1145, 1517
ScrFI	CCNGG	8 cut(s)	147, 364, 527, 608, 709, 1067, 1412, 1513
SduI	GDGCHC	4 cut(s)	39, 776, 952, 1410
SfaNI	GCATC	3 cut(s)	196, 501, 622
SfcI	CTRYAG	3 cut(s)	72, 81, 1543
SgrAI	CRCCGGYG	1 cut(s)	553
SinI	GGWCC	2 cut(s)	523, 1063
SmiMI	CAYNNNNRTG	3 cut(s)	497, 1185, 1263
SmlI	CTYRAG	1 cut(s)	1330
SmoI	CTYRAG	1 cut(s)	1330
SnaBI	TACGTA	1 cut(s)	1289
SphI	GCATGC	1 cut(s)	1262
Sse9I	AATT	4 cut(s)	230, 1058, 1311, 1318
SseBI	AGGCCT	1 cut(s)	362
SsiI	CCGC	2 cut(s)	968, 990
SspMI	CTAG	2 cut(s)	900, 1005
SstI	GAGCTC	1 cut(s)	1410
StuI	AGGCCT	1 cut(s)	362
StyD4I	CCNGG	8 cut(s)	145, 362, 525, 606, 707, 1065, 1410, 1511
StyI	CCWWGG	7 cut(s)	275, 417, 702, 899, 927, 1004, 1108
TaaI	ACNGT	5 cut(s)	614, 855, 865, 1357, 1565
TaiI	ACGT	4 cut(s)	1231, 1291, 1479, 1507
TaqI	TCGA	7 cut(s)	50, 448, 585, 857, 867, 1139, 1584
TasI	AATT	4 cut(s)	230, 1058, 1311, 1318
TatI	WGTACW	1 cut(s)	1119
TfiI	GAWTC	3 cut(s)	47, 1325, 1586
Tru1I	TTAA	6 cut(s)	572, 594, 656, 1124, 1254, 1485
Tru9I	TTAA	6 cut(s)	572, 594, 656, 1124, 1254, 1485
TscAI	CASTG	5 cut(s)	643, 781, 921, 1281, 1360
TseFI	GTSAC	1 cut(s)	644
TseI	GCWGC	4 cut(s)	80, 83, 142, 1088
Tsp45I	GTSAC	1 cut(s)	644
TspDTI	ATGAA	7 cut(s)	255, 568, 617, 862, 1038, 1281, 1544
TspRI	CASTG	5 cut(s)	643, 781, 921, 1281, 1360
Van91I	CCANNNNNTGG	2 cut(s)	174, 928
VpaK11BI	GGWCC	2 cut(s)	523, 1063
XapI	RAATTY	2 cut(s)	1311, 1318
XceI	RCATGY	1 cut(s)	1262
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1184
XmaJI	CCTAGG	2 cut(s)	899, 1004
XmiI	GTMKAC	2 cut(s)	857, 895
XmnI	GAANNNNTTC	1 cut(s)	1476
XspI	CTAG	2 cut(s)	900, 1005
ZraI	GACGTC	1 cut(s)	1229
ZrmI	AGTACT	1 cut(s)	1121

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.