Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0015943

Physical Location & Seq

Genomic Coordinates Reverse (-)

19013028 .. 19018131

Gene Structure 5104 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0120000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3144 bp

ATGAAATCTTTGCTGTATCTTTTCTTATTCTCAATCACCATCTGTTTTTATATAATCCCTGCAATCCACAGCCAGTGTGAGGAAAACCAGCAACTATCATTGCTCCATCTGAAGAAAAGCCTTGTATTTGATTCTTCTGTATCCTCCAAGCTTATATTCTGGAATTCAAGTGTTGACTGTTGTTCCTGGGTTGGTGTAACTTGCAGTACCAAGGGCCATGTGGTTGGACTTGACATCAGCGGTGAATTTATCTCATCTAGCATTGACAGTTCAAGCAGTCTCTTCCATCTTCAACATCTTCAAAGCCTAAATTTGGCCTGGAATGACTTCAATGGCTCTCAAATTCCAGCCGCAATCGGAAAGCTTACAAACTTGAAGTATCTAAATTTGTCGTCTGCGGAATTCTTCGGCCAAATTCCCATTGAGATCTCAAAATTGACAAGGTTGGTTATCCTTGACATATCTGAAAATTTCTCTATTAGAGGTCCATTAACACTTCAGAAACCAAATTTAAGCATGTTGGTTCAGAACCTCACACAGCTTACAGAGTTATATCTTGATGTCGTTCAAATATTAGCTGAGGGAATTGACTGGTGCCAAGCCATAGCCTCCTCATTGCCAAACCTGAGGGTGTTGAGCTTATCTGATTGTGCGCTTTCAGGCCCTTTCCATGAGTCTCTTGCTGAGCTTCAGTCTCTATCTGTTGTTCGTTTGGACAATAACAGATTCTTTGCTCCTGTTCCAGGATTCTTTGCCAATTTTCCAAACTTGACTTCCTTGACTCTCTGTAATTCTCAGCTGCAGGGAACATTTCCGGATGAGATTCTTCAGGTACCTTCTCTTCAAGCTATTGATATAACCAATAATCTAGAACTTCATGGTTCTTTGCCACAGTTTTCCAAGAACAATTCTCTTTGGTCCCTAGTTGTAAGAGAAACGAATTTTTCTGGACTTTTGCCAGAGTCAATTGGAAATCTCAGGCAGCTGTCAACGATAGACATTTCTGGTTGTGATTTCACTGGATCAATCCCAAGGTCAGTTGGGAACCTAACACAATTAGTTCAGTTGAAAATGTCAGGAAACAAATTTGATGGTCCAATTGATTCTATTCACTGGGAAAGCCTTATTAATCTGCTATATCTTGCTTTGGACTCTAATTTACTCAATGGGAGAATTCCAACATCTATCTTTTCTCCTCCCTTGTTGGAAGAACTACTACTTTCCCACAATCAATTCTCAGGTCAAGTTCCAAAAATTTCCAATATCTCTTCGAAATCCCTGAACAACCTTGATTTGAGTAGCAACAATTTGGAAGGACCAATATCTGCTTCTCTCCTATATTTGCGAGGGCTTCGACAACTTAATCTTTCTTCAAACAATTTCAGTGGTTTTCCTTTCATTGGCCCTCAACAGCTCGAAAATGTTAAAGAAATTGATCTTTCGCACAATAGCTTATTGATTTGTTCAAATGTCAGCAATTCCTCATCTTCCACATTTCCTCAAATTGAAATATTGAACTTGTCTTCTAACAAGCTGAGAACATTCCCACATATGTTGAGAAATCTCTCCAGATTGTACCATATGGACCTTTCGGAAAACCAAATGCAAGGCAAGATTCCCAAATGGATATGGGGAGTCAGTTCTCTTCAACACCTAAATGTTTCTTGTAACTCCTTAGTGACTGTAGAAGCTCCTTCACTCAATTCTACTTCATTTGTCTCTGAGCTTGACCTTCATTTGAACCAATTTCAGGGACAGATCCCAATTTTCCTACCATTTGCTACTTATCTGGATTACTCAGGGAATCATTTCAGCTCTAGCATACCAATTGACATTGGTACTTCCATTAATTCCATTTCTTTCATCTCTCTTTCAAGAAATAAGTTATACGGGACAATTCCAGAATCAATATGCAACATCTCGTCATATCTTGAGGTTCTTGATGTATCCCATAATTCTCTAAGTGGCTTAGTTCCCAAATGCTTGACTACAATGGGCATTTCCAGTGTACTTAATTTAAGGGGAAACAACCTCACTGGCACTATTCCTGATACATTTCTTGAAGATTGTAGTCTAAAAACGCTGGAGCTAAGTGAAAATCAGATGGAAGGCCAGGTTCCAAAATCTCTAGCCAGCTGCACAAGTTTAGAGTTTTTAAACCTTAGAAGCAATCAGATTAGCGATACCTTTCCATGCTTATTGATGAAAATATCCACCTTGAGTGTGCTTGTTTTGCGGTCCAACAAATTTCATGGAAGCATTGAATGTTCAGAGATCTATGGCACCTGGCAGAGGCTTCAAGTGATAGACCTAGCACACAACTTCTTCAGTGGTGGAATATCAGGAACATCTTTACCAAGTTTGCCGACAACAAAAAAACAAAGATTGCCGACAAAATTCATATATAGGTCCGAATTTCGGCAACTCAACGATTTGCCACCAGAAACTATTGGTCAAATGTATGCTGGCAAGTATTTCGAGGAAGCAATAACAGTTACCAGCAAAGGTATAGACATGAAGCTGGTGAAAATTATGGCTGCCTTCACCTTGATTGACTTTTCATACAACAAATTCAACGGGTCAATCCCAGAGTACAGTGAAATATACGAATCATTACAGGTGTTCAACTTGTCCAATAATGATTTCACAGGTGAAATCCCATCTTCATTTGGTGATATGCTTCAACTAGAATCCTTAGACCTCTCACAAAACCACTTGAGTGGGAAAATTCCACAAGAGCTTGCTGAACTTACTTTCCTTTCATTCCTGAATCTCTCCAATAATCAACTGGTCGGCAAGATCCCAACCGGTCCGCAGTTTTCAACATTTTCAAAAGCCTCATTTTTAGGTAACAAAGGATTATGGGGTTTTCCTTTGGACAACATGGTAGTATTGTCTCCACCAAGATCACATGGAATCCCTCCAAAATCTGCACATAAGATTGACTGGGATCTTATCGATATTGAAATTGGATTTGTATTTGGGCTCGGAATTGCCATCGGGTCACTTTTCTTTTGCAAGAGATGGAGGAAATGGTATTACAGAGTTATGTATAACATTGTGCTTATGATATTCCCTCAGCTGGATCAAAGAATTGGTAATCATAGAAGACATGTTTACATTGCTCCAAGATGGAGACGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005102 GO:0005179 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005911 GO:0007154 GO:0007165 GO:0007267 GO:0008150 GO:0009506 GO:0009966 GO:0009987 GO:0010469 GO:0010646 GO:0019722 GO:0019932 GO:0023051 GO:0023052 GO:0030054 GO:0030545 GO:0035556 GO:0048018 GO:0048046 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0065009 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RALF

Protein Analysis

1047

Amino Acids

116.62

Weight (kDa)

6.05

Isoelectric Point (pI)

43.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	29 - 69	1.1e-08	Leucine rich repeat N-terminal domain
LRR_14	PF23598	90 - 287	2.5e-12	Leucine-rich repeat region
LRR_8	PF13855	232 - 289	1.2e-06	Leucine rich repeat
LRR_14	PF23598	308 - 360	2e-06	Leucine-rich repeat region
LRR_8	PF13855	500 - 559	1.4e-07	Leucine rich repeat
LRR_8	PF13855	670 - 726	2.6e-08	Leucine rich repeat
LRR_8	PF13855	871 - 930	2.5e-08	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015943)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14010
fragaria_vesca	FvH4_4g13190
malus_domestica	MD04G1018100.v1.1
prunus_persica	Prupe.1G167100_v2.0.a1
pyrus_communis	pycom13g29140
rosa_chinensis	RchiOBHm_Chr4g0413341
rosa_multiflora	Rmu_sc0007671.1_g000002 Rmu_sc0009573.1_g000009
rosa_roxburghii	Rroxscaffold_5G00357260
rosa_rugosa	Rorug04G0120000
rosa_samantha	Rh4AG179400 Rh4BG178500 Rh4CG190000 Rh4DG174500
rosa_wichuraiana	Rw4G014910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	832
AccB1I	GGYRCC	3 cut(s)	594, 832, 2282
AccIII	TCCGGA	1 cut(s)	814
AciI	CCGC	5 cut(s)	240, 351, 398, 2236, 2813
AclWI	GGATC	5 cut(s)	1030, 1753, 2794, 2958, 3093
AcoI	YGGCCR	1 cut(s)	409
AcuI	CTGAAG	5 cut(s)	131, 482, 674, 812, 2311
AfaI	GTAC	6 cut(s)	208, 834, 1577, 1840, 2010, 2594
AfiI	CCNNNNNNNGG	8 cut(s)	79, 313, 743, 1400, 1750, 2292, 2418, 3082
AflIII	ACRYGT	1 cut(s)	3112
AgeI	ACCGGT	1 cut(s)	2807
AjnI	CCWGG	5 cut(s)	185, 317, 742, 2112, 2285
AjuI	GAANNNNNNNTTGG	8 cut(s)	140, 172, 757, 789, 1312, 1344, 2627, 2659
AleI	CACNNNNGTG	1 cut(s)	2718
AloI	GAACNNNNNNTCC	2 cut(s)	2739, 2771
Alw26I	GTCTC	6 cut(s)	284, 681, 699, 1723, 2901, 3130
AlwI	GGATC	5 cut(s)	1030, 1753, 2794, 2958, 3093
Aor13HI	TCCGGA	1 cut(s)	814
AoxI	GGCC	6 cut(s)	214, 315, 409, 661, 1402, 2110
ApeKI	GCWGC	4 cut(s)	799, 982, 2136, 2537
AseI	ATTAAT	2 cut(s)	1128, 1848
AsiGI	ACCGGT	1 cut(s)	2807
Asp700I	GAANNNNTTC	2 cut(s)	326, 1808
Asp718I	GGTACC	1 cut(s)	832
AspLEI	GCGC	1 cut(s)	655
AsuHPI	GGTGA	6 cut(s)	28, 254, 2536, 2536, 2663, 2684
AsuII	TTCGAA	1 cut(s)	1271
AvaII	GGWCC	8 cut(s)	485, 918, 1094, 1316, 1585, 2238, 2409, 2810
AxyI	CCTNAGG	1 cut(s)	626
BanI	GGYRCC	3 cut(s)	594, 832, 2282
BanII	GRGCYC	1 cut(s)	2988
BarI	GAAGNNNNNNTAC	4 cut(s)	825, 857, 1200, 1232
BbsI	GAAGAC	2 cut(s)	1515, 3115
BbvCI	CCTCAGC	2 cut(s)	579, 3078
BbvI	GCAGC	4 cut(s)	786, 994, 2123, 2524
BccI	CCATC	9 cut(s)	47, 114, 294, 1085, 2098, 2668, 3005, 3018, 3126
BcgI	CGANNNNNNTGC	2 cut(s)	2458, 2492
BciT130I	CCWGG	5 cut(s)	187, 319, 744, 2114, 2287
BciVI	GTATCC	2 cut(s)	151, 1957
BcoDI	GTCTC	6 cut(s)	284, 681, 699, 1723, 2901, 3130
BfaI	CTAG	7 cut(s)	258, 869, 923, 1818, 2129, 2312, 2687
BfmI	CTRYAG	2 cut(s)	800, 1683
BfuI	GTATCC	2 cut(s)	151, 1957
BglII	AGATCT	2 cut(s)	426, 2274
BisI	GCNGC	5 cut(s)	351, 800, 983, 2137, 2538
BlpI	GCTNAGC	1 cut(s)	684
BlsI	GCNGC	5 cut(s)	352, 801, 984, 2138, 2539
Bme1390I	CCNGG	5 cut(s)	187, 319, 744, 2114, 2287
Bme18I	GGWCC	8 cut(s)	485, 918, 1094, 1316, 1585, 2238, 2409, 2810
BmiI	GGNNCC	6 cut(s)	596, 834, 920, 1046, 2118, 2284
BmrFI	CCNGG	5 cut(s)	187, 319, 744, 2114, 2287
BmrI	ACTGGG	2 cut(s)	1123, 2956
BmuI	ACTGGG	2 cut(s)	1123, 2956
BpiI	GAAGAC	2 cut(s)	1515, 3115
BpmI	CTGGAG	2 cut(s)	1552, 2105
Bpu10I	CCTNAGC	2 cut(s)	579, 3078
Bpu1102I	GCTNAGC	1 cut(s)	684
Bpu14I	TTCGAA	1 cut(s)	1271
BpuEI	CTTGAG	3 cut(s)	1952, 2239, 2737
Bsa29I	ATCGAT	1 cut(s)	2958
BsaJI	CCNNGG	3 cut(s)	186, 210, 1031
BsaWI	WCCGGW	2 cut(s)	814, 2807
Bsc4I	CCNNNNNNNGG	8 cut(s)	79, 313, 743, 1400, 1750, 2292, 2418, 3082
Bse118I	RCCGGY	1 cut(s)	2807
Bse1I	ACTGG	8 cut(s)	73, 596, 1024, 1118, 2004, 2041, 2793, 2951
Bse21I	CCTNAGG	1 cut(s)	626
Bse3DI	GCAATG	3 cut(s)	98, 614, 3120
BseAI	TCCGGA	1 cut(s)	814
BseBI	CCWGG	5 cut(s)	187, 319, 744, 2114, 2287
BseCI	ATCGAT	1 cut(s)	2958
BseDI	CCNNGG	3 cut(s)	186, 210, 1031
BseGI	GGATG	1 cut(s)	823
BseLI	CCNNNNNNNGG	8 cut(s)	79, 313, 743, 1400, 1750, 2292, 2418, 3082
BseMI	GCAATG	3 cut(s)	98, 614, 3120
BseNI	ACTGG	8 cut(s)	73, 596, 1024, 1118, 2004, 2041, 2793, 2951
BseRI	GAGGAG	2 cut(s)	601, 1185
BseXI	GCAGC	4 cut(s)	786, 994, 2123, 2524
BsgI	GTGCAG	2 cut(s)	2122, 2916
BshFI	GGCC	6 cut(s)	216, 317, 411, 663, 1404, 2112
BshNI	GGYRCC	3 cut(s)	594, 832, 2282
BshTI	ACCGGT	1 cut(s)	2807
BshVI	ATCGAT	1 cut(s)	2958
BsiSI	CCGG	2 cut(s)	815, 2808
BslFI	GGGAC	3 cut(s)	904, 1767, 1906
BslI	CCNNNNNNNGG	8 cut(s)	79, 313, 743, 1400, 1750, 2292, 2418, 3082
BsmAI	GTCTC	6 cut(s)	284, 681, 699, 1723, 2901, 3130
BsmBI	CGTCTC	1 cut(s)	3130
BsmFI	GGGAC	3 cut(s)	904, 1767, 1906
BsnI	GGCC	6 cut(s)	216, 317, 411, 663, 1404, 2112
Bsp119I	TTCGAA	1 cut(s)	1271
Bsp1286I	GDGCHC	1 cut(s)	2988
Bsp13I	TCCGGA	1 cut(s)	814
Bsp143I	GATC	9 cut(s)	426, 1022, 1435, 1758, 2274, 2799, 2906, 2950, 3085
Bsp1720I	GCTNAGC	1 cut(s)	684
BspACI	CCGC	5 cut(s)	240, 351, 398, 2236, 2813
BspANI	GGCC	6 cut(s)	216, 317, 411, 663, 1404, 2112
BspDI	ATCGAT	1 cut(s)	2958
BspEI	TCCGGA	1 cut(s)	814
BspLI	GGNNCC	6 cut(s)	596, 834, 920, 1046, 2118, 2284
BspMAI	CTGCAG	1 cut(s)	804
BspPI	GGATC	5 cut(s)	1030, 1753, 2794, 2958, 3093
BspT104I	TTCGAA	1 cut(s)	1271
BspT107I	GGYRCC	3 cut(s)	594, 832, 2282
BsrDI	GCAATG	3 cut(s)	98, 614, 3120
BsrFI	RCCGGY	1 cut(s)	2807
BsrI	ACTGG	8 cut(s)	73, 596, 1024, 1118, 2004, 2041, 2793, 2951
BssAI	RCCGGY	1 cut(s)	2807
BssECI	CCNNGG	3 cut(s)	186, 210, 1031
BssMI	GATC	9 cut(s)	426, 1022, 1435, 1758, 2274, 2799, 2906, 2950, 3085
BssT1I	CCWWGG	2 cut(s)	210, 1031
Bst2UI	CCWGG	5 cut(s)	187, 319, 744, 2114, 2287
Bst4CI	ACNGT	6 cut(s)	179, 269, 894, 1684, 2494, 2597
Bst6I	CTCTTC	4 cut(s)	287, 846, 1273, 1650
BstBI	TTCGAA	1 cut(s)	1271
BstC8I	GCNNGC	3 cut(s)	2134, 2467, 2742
BstENI	CCTNNNNNAGG	2 cut(s)	741, 2290
BstF5I	GGATG	1 cut(s)	823
BstHHI	GCGC	1 cut(s)	655
BstKTI	GATC	9 cut(s)	429, 1025, 1438, 1761, 2277, 2802, 2909, 2953, 3088
BstMAI	GTCTC	6 cut(s)	284, 681, 699, 1723, 2901, 3130
BstMBI	GATC	9 cut(s)	426, 1022, 1435, 1758, 2274, 2799, 2906, 2950, 3085
BstMWI	GCNNNNNNNGC	1 cut(s)	2233
BstNI	CCWGG	5 cut(s)	187, 319, 744, 2114, 2287
BstNSI	RCATGY	2 cut(s)	520, 3116
BstSCI	CCNGG	5 cut(s)	185, 317, 742, 2112, 2285
BstSFI	CTRYAG	2 cut(s)	800, 1683
BstV1I	GCAGC	4 cut(s)	786, 994, 2123, 2524
BstV2I	GAAGAC	2 cut(s)	1515, 3115
BstX2I	RGATCY	5 cut(s)	426, 1758, 2274, 2799, 2950
BstXI	CCANNNNNNTGG	2 cut(s)	224, 2720
BstYI	RGATCY	5 cut(s)	426, 1758, 2274, 2799, 2950
Bsu15I	ATCGAT	1 cut(s)	2958
Bsu36I	CCTNAGG	1 cut(s)	626
BsuI	GTATCC	2 cut(s)	151, 1957
BsuRI	GGCC	6 cut(s)	216, 317, 411, 663, 1404, 2112
BsuTUI	ATCGAT	1 cut(s)	2958
BtsCI	GGATG	1 cut(s)	823
BtsIMutI	CAGTG	8 cut(s)	80, 1017, 1111, 1390, 2011, 2034, 2335, 2602
Cac8I	GCNNGC	3 cut(s)	2134, 2467, 2742
CfoI	GCGC	1 cut(s)	655
Cfr10I	RCCGGY	1 cut(s)	2807
ClaI	ATCGAT	1 cut(s)	2958
CpoI	CGGWCCG	1 cut(s)	2810
Csp6I	GTAC	6 cut(s)	207, 833, 1576, 1839, 2009, 2593
CspAI	ACCGGT	1 cut(s)	2807
CspCI	CAANNNNNGTGG	4 cut(s)	1366, 1401, 1536, 1571
CspI	CGGWCCG	1 cut(s)	2810
CviQI	GTAC	6 cut(s)	207, 833, 1576, 1839, 2009, 2593
DpnI	GATC	9 cut(s)	428, 1024, 1437, 1760, 2276, 2801, 2908, 2952, 3087
DpnII	GATC	9 cut(s)	426, 1022, 1435, 1758, 2274, 2799, 2906, 2950, 3085
DraI	TTTAAA	1 cut(s)	2157
EaeI	YGGCCR	1 cut(s)	409
Eam1104I	CTCTTC	4 cut(s)	287, 846, 1273, 1650
EarI	CTCTTC	4 cut(s)	287, 846, 1273, 1650
Eco130I	CCWWGG	2 cut(s)	210, 1031
Eco24I	GRGCYC	1 cut(s)	2988
Eco47I	GGWCC	8 cut(s)	485, 918, 1094, 1316, 1585, 2238, 2409, 2810
Eco57I	CTGAAG	5 cut(s)	131, 482, 674, 812, 2311
Eco81I	CCTNAGG	1 cut(s)	626
EcoNI	CCTNNNNNAGG	2 cut(s)	741, 2290
EcoO109I	RGGNCCY	1 cut(s)	662
EcoRI	GAATTC	3 cut(s)	163, 401, 1173
EcoRII	CCWGG	5 cut(s)	185, 317, 742, 2112, 2285
EcoT14I	CCWWGG	2 cut(s)	210, 1031
EcoT38I	GRGCYC	1 cut(s)	2988
ErhI	CCWWGG	2 cut(s)	210, 1031
Esp3I	CGTCTC	1 cut(s)	3130
FaqI	GGGAC	3 cut(s)	904, 1767, 1906
FauNDI	CATATG	2 cut(s)	1551, 1581
Fnu4HI	GCNGC	5 cut(s)	351, 800, 983, 2137, 2538
FokI	GGATG	1 cut(s)	830
FriOI	GRGCYC	1 cut(s)	2988
Fsp4HI	GCNGC	5 cut(s)	351, 800, 983, 2137, 2538
FspBI	CTAG	7 cut(s)	258, 869, 923, 1818, 2129, 2312, 2687
GlaI	GCGC	1 cut(s)	654
GluI	GCNGC	5 cut(s)	351, 800, 983, 2137, 2538
GsuI	CTGGAG	2 cut(s)	1552, 2105
HaeIII	GGCC	6 cut(s)	216, 317, 411, 663, 1404, 2112
HapII	CCGG	2 cut(s)	815, 2808
HhaI	GCGC	1 cut(s)	655
Hin6I	GCGC	1 cut(s)	653
HinP1I	GCGC	1 cut(s)	653
HincII	GTYRAC	2 cut(s)	175, 990
HindII	GTYRAC	2 cut(s)	175, 990
HindIII	AAGCTT	2 cut(s)	149, 362
HpaII	CCGG	2 cut(s)	815, 2808
HphI	GGTGA	6 cut(s)	28, 254, 2536, 2536, 2663, 2684
Hpy166II	GTNNAC	4 cut(s)	175, 990, 2009, 3118
Hpy8I	GTNNAC	4 cut(s)	175, 990, 2009, 3118
HpyAV	CCTTC	6 cut(s)	846, 1307, 1704, 1742, 2102, 2551
HpyCH4III	ACNGT	6 cut(s)	179, 269, 894, 1684, 2494, 2597
HpyCH4IV	ACGT	1 cut(s)	3139
HpyCH4V	TGCA	8 cut(s)	62, 204, 802, 1606, 1914, 2139, 2933, 3018
HpyF10VI	GCNNNNNNNGC	1 cut(s)	2233
HpySE526I	ACGT	1 cut(s)	3139
HspAI	GCGC	1 cut(s)	653
Kpn2I	TCCGGA	1 cut(s)	814
KpnI	GGTACC	1 cut(s)	836
Kzo9I	GATC	9 cut(s)	426, 1022, 1435, 1758, 2274, 2799, 2906, 2950, 3085
LmnI	GCTCC	5 cut(s)	108, 739, 1696, 2086, 3130
Lsp1109I	GCAGC	4 cut(s)	786, 994, 2123, 2524
MaeI	CTAG	7 cut(s)	258, 869, 923, 1818, 2129, 2312, 2687
MaeII	ACGT	1 cut(s)	3139
MaeIII	GTNAC	6 cut(s)	196, 1667, 1678, 2494, 2849, 3003
MalI	GATC	9 cut(s)	428, 1024, 1437, 1760, 2276, 2801, 2908, 2952, 3087
MboI	GATC	9 cut(s)	426, 1022, 1435, 1758, 2274, 2799, 2906, 2950, 3085
MfeI	CAATTG	3 cut(s)	966, 1098, 1827
MflI	RGATCY	5 cut(s)	426, 1758, 2274, 2799, 2950
MhlI	GDGCHC	1 cut(s)	2988
MlyI	GAGTC	5 cut(s)	683, 775, 971, 1145, 1644
MmeI	TCCRAC	4 cut(s)	205, 1185, 1202, 2265
MroI	TCCGGA	1 cut(s)	814
MroXI	GAANNNNTTC	2 cut(s)	326, 1808
MseI	TTAA	9 cut(s)	491, 512, 1128, 1362, 1425, 1848, 2013, 2018, 2156
MslI	CAYNNNNRTG	2 cut(s)	1656, 2718
MspA1I	CMGCKG	5 cut(s)	240, 799, 985, 2136, 3082
MspI	CCGG	2 cut(s)	815, 2808
MspR9I	CCNGG	5 cut(s)	187, 319, 744, 2114, 2287
MunI	CAATTG	3 cut(s)	966, 1098, 1827
MvaI	CCWGG	5 cut(s)	187, 319, 744, 2114, 2287
MwoI	GCNNNNNNNGC	1 cut(s)	2233
NdeI	CATATG	2 cut(s)	1551, 1581
NdeII	GATC	9 cut(s)	426, 1022, 1435, 1758, 2274, 2799, 2906, 2950, 3085
NlaIV	GGNNCC	6 cut(s)	596, 834, 920, 1046, 2118, 2284
NmuCI	GTSAC	2 cut(s)	1678, 3003
NspI	RCATGY	2 cut(s)	520, 3116
NspV	TTCGAA	1 cut(s)	1271
OliI	CACNNNNGTG	1 cut(s)	2718
PciI	ACATGT	1 cut(s)	3112
PdmI	GAANNNNTTC	2 cut(s)	326, 1808
PfoI	TCCNGGA	1 cut(s)	742
PinAI	ACCGGT	1 cut(s)	2807
PkrI	GCNGC	5 cut(s)	352, 801, 984, 2138, 2539
PleI	GAGTC	5 cut(s)	682, 775, 970, 1145, 1643
PpsI	GAGTC	5 cut(s)	682, 775, 970, 1145, 1643
PscI	ACATGT	1 cut(s)	3112
PshBI	ATTAAT	2 cut(s)	1128, 1848
Psp6I	CCWGG	5 cut(s)	185, 317, 742, 2112, 2285
PspGI	CCWGG	5 cut(s)	185, 317, 742, 2112, 2285
PspN4I	GGNNCC	6 cut(s)	596, 834, 920, 1046, 2118, 2284
PstI	CTGCAG	1 cut(s)	804
PsuI	RGATCY	5 cut(s)	426, 1758, 2274, 2799, 2950
PvuII	CAGCTG	4 cut(s)	799, 985, 2136, 3082
RsaI	GTAC	6 cut(s)	208, 834, 1577, 1840, 2010, 2594
RsaNI	GTAC	6 cut(s)	207, 833, 1576, 1839, 2009, 2593
RseI	CAYNNNNRTG	2 cut(s)	1656, 2718
Rsr2I	CGGWCCG	1 cut(s)	2810
RsrII	CGGWCCG	1 cut(s)	2810
SaqAI	TTAA	9 cut(s)	491, 512, 1128, 1362, 1425, 1848, 2013, 2018, 2156
SatI	GCNGC	5 cut(s)	351, 800, 983, 2137, 2538
Sau3AI	GATC	9 cut(s)	426, 1022, 1435, 1758, 2274, 2799, 2906, 2950, 3085
SchI	GAGTC	5 cut(s)	683, 775, 971, 1145, 1644
ScrFI	CCNGG	5 cut(s)	187, 319, 744, 2114, 2287
SduI	GDGCHC	1 cut(s)	2988
SfcI	CTRYAG	2 cut(s)	800, 1683
SfuI	TTCGAA	1 cut(s)	1271
SinI	GGWCC	8 cut(s)	485, 918, 1094, 1316, 1585, 2238, 2409, 2810
SmiMI	CAYNNNNRTG	2 cut(s)	1656, 2718
SmlI	CTYRAG	3 cut(s)	1931, 2218, 2716
SmoI	CTYRAG	3 cut(s)	1931, 2218, 2716
SsiI	CCGC	5 cut(s)	240, 351, 398, 2236, 2813
SspI	AATATT	2 cut(s)	573, 1512
SspMI	CTAG	7 cut(s)	258, 869, 923, 1818, 2129, 2312, 2687
StyD4I	CCNGG	5 cut(s)	185, 317, 742, 2112, 2285
StyI	CCWWGG	2 cut(s)	210, 1031
TaaI	ACNGT	6 cut(s)	179, 269, 894, 1684, 2494, 2597
TaiI	ACGT	1 cut(s)	3142
TaqI	TCGA	5 cut(s)	1271, 1354, 1416, 2478, 2958
TatI	WGTACW	2 cut(s)	2008, 2592
TauI	GCSGC	1 cut(s)	353
Tru1I	TTAA	9 cut(s)	491, 512, 1128, 1362, 1425, 1848, 2013, 2018, 2156
Tru9I	TTAA	9 cut(s)	491, 512, 1128, 1362, 1425, 1848, 2013, 2018, 2156
TscAI	CASTG	8 cut(s)	80, 1024, 1118, 1390, 2011, 2041, 2335, 2602
TseFI	GTSAC	2 cut(s)	1678, 3003
TseI	GCWGC	4 cut(s)	799, 982, 2136, 2537
Tsp45I	GTSAC	2 cut(s)	1678, 3003
TspRI	CASTG	8 cut(s)	80, 1024, 1118, 1390, 2011, 2041, 2335, 2602
VpaK11BI	GGWCC	8 cut(s)	485, 918, 1094, 1316, 1585, 2238, 2409, 2810
VspI	ATTAAT	2 cut(s)	1128, 1848
XagI	CCTNNNNNAGG	2 cut(s)	741, 2290
XbaI	TCTAGA	1 cut(s)	868
XceI	RCATGY	2 cut(s)	520, 3116
XcmI	CCANNNNNNNNNTGG	2 cut(s)	217, 2785
XmnI	GAANNNNTTC	2 cut(s)	326, 1808
XspI	CTAG	7 cut(s)	258, 869, 923, 1818, 2129, 2312, 2687

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.