Rorug04G0269300

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
44243958 .. 44246127
2170 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0269300.1

Sequence Viewer

Length: 1470 bp
ATGAATTCCAACTTCGATTTCGATCTGGGTCTCGGATCCAACCGACCCAGATCCCTCAACGACCAAAAGAACAAAACTTCCTCCTTCTCCACCGCCCCGCAGCCGTCCAAACCCGCCTGGCAGCCCAACAAGACCACCTCATGGACCCACCAGCCCGCTCCGGCCCAGCCGCCTCTCAACGGCCCGACTTCCATGGTCGGAGATATCTTCGGCAAGAGTTGGGCCTCCACCGGCTCATCGGTTTCGGCCACTCCGATTGGGGTCGTCAACAAGAACCCCAATCTGTTCGGCGATTTGGTCAGCTCTGCTATGGGCGGTAAGGTTAATAGTAGCAGCAATGTTCCTTTAAAGAATGCAACTCCTGCTTCGAATAAGAGCTCGTTTTCGATGGGGAATGTGGCTGATTCGTTGCCCAAAACCACCGCCGGTACTAGTTCTGTCCAGAGTGGTATAAATTGGGGTGGTTCTGCAAGTTCTGGGGGTTTCTCTAGTGGGTTTAATAATAGTAGTAAGATCAGTAGTGGGGTTAATGCTAATACTACTAACAGTCCGAGCCTCGGAGGCCCGTCGCTGCGAAATATGGGCAGTGCTGGTGGTGTTGGTGTTGGTGGAGGTAGTGGAATTGGTTCTAAGAAAGACCCATTTGGTTCTTTGGTTGATCTTGCATCGAAACCATCGGGTGGGATTAACACGGCGAGTAAAGGCAGCAATAAGAGTAGTGTTGCTGATGATCCATTTGGGGATTTTCAGAATGCTCCAAAACCAAGTACCACTACTGCGGCATCTGCATCTCCCGCTAGCGGCTTCTCCTCAAATGGTAACAGTTTTATGGGGTCGGATTCATTTTCGGGCTTTGGTGATTTTGGGACCCCGGCTAAGCAGAATCCTGTTCAGTCTACTAGCAGTGATCCGCTTGACATGTTCTTTCCCACATCCTCGGCTTCTGGGGCTGGTATTGCAGCAGCGAGTAATGGAGTTGGAGTACAGCAATCCTCTGGAATTGATGATTGGGGGACGGAGTTTGGAGGTGGAGTAGATGATATGGGTGGTTCCACAACTGAGCTTGAGGGCCTTCCACCTCCTCCAGCTGGGGTATCTGCTTCTGCAGCAAAGAGTAAGGGAATGGATAATTACAAGCAAGGGCAGTATCCAGATGCTATTAAGTGGCTATCTTGGGCTGTAGTGCTTCTTGAGAAAGCAGCTGATAGGTCTGCCCTTTCAGACGTATTGTCGAGCAGAGCTTCATGTTACAAAGAAGTAGGAGAGTACAAGAAAGCGGTGGCAGACTGCACAAAGGTTCTAGAACAAGATGATGTAAATGTATCTGTTCTCGTACAGCGTGCACTCTTGTATGAAGGTATGGAAAAGTACAAACTTGGAGCAGAAGATTTGAGGAGTGTTCTGAAGATTGATCCTGGTAACAGGGTTGCAAGAGGCACCATTCACCGCCTGACACAGTTGGCAGACTAG

Protein Analysis

489

Amino Acids

49.73

Weight (kDa)

7.64

Isoelectric Point (pI)

37.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1436
AccB7I CCANNNNNTGG 2 cut(s) 141, 680
AccBSI CCGCTC 1 cut(s) 158
AccI GTMKAC 1 cut(s) 896
AclWI GGATC 6 cut(s) 30, 43, 45, 725, 902, 1406
AcoI YGGCCR 1 cut(s) 246
AcsI RAATTY 1 cut(s) 4
AcuI CTGAAG 1 cut(s) 1424
AfaI GTAC 6 cut(s) 430, 769, 984, 1268, 1335, 1370
AfiI CCNNNNNNNGG 6 cut(s) 141, 179, 557, 680, 800, 1088
AflIII ACRYGT 1 cut(s) 918
AhdI GACNNNNNGTC 1 cut(s) 1228
AhlI ACTAGT 1 cut(s) 431
AjnI CCWGG 2 cut(s) 116, 1414
AjuI GAANNNNNNNTTGG 3 cut(s) 34, 991, 1023
AloI GAACNNNNNNTCC 2 cut(s) 62, 94
AluBI AGCT 6 cut(s) 303, 378, 1063, 1088, 1202, 1241
AluI AGCT 6 cut(s) 303, 378, 1063, 1088, 1202, 1241
Alw21I GWGCWC 2 cut(s) 380, 1345
Alw26I GTCTC 1 cut(s) 35
Alw44I GTGCAC 1 cut(s) 1341
AlwI GGATC 6 cut(s) 30, 43, 45, 725, 902, 1406
AoxI GGCC 6 cut(s) 162, 181, 222, 246, 562, 1069
ApaLI GTGCAC 1 cut(s) 1341
ApeKI GCWGC 9 cut(s) 100, 121, 333, 571, 705, 959, 962, 1106, 1199
ApoI RAATTY 1 cut(s) 4
Asp700I GAANNNNTTC 1 cut(s) 625
AspS9I GGNCC 7 cut(s) 144, 163, 182, 222, 563, 867, 1069
AsuC2I CCSGG 1 cut(s) 872
AsuHPI GGTGA 2 cut(s) 869, 1436
AsuII TTCGAA 1 cut(s) 368
AsuNHI GCTAGC 1 cut(s) 797
AvaII GGWCC 2 cut(s) 144, 867
BaeGI GKGCMC 1 cut(s) 1345
BamHI GGATCC 1 cut(s) 35
BanI GGYRCC 1 cut(s) 1436
BanII GRGCYC 1 cut(s) 380
Bbv12I GWGCWC 2 cut(s) 380, 1345
BbvI GCAGC 9 cut(s) 112, 133, 345, 558, 717, 971, 974, 1118, 1211
BccI CCATC 2 cut(s) 382, 682
BceAI ACGGC 3 cut(s) 88, 196, 708
BciT130I CCWGG 2 cut(s) 118, 1416
BciVI GTATCC 1 cut(s) 1158
BcnI CCSGG 1 cut(s) 872
BcoDI GTCTC 1 cut(s) 35
BcuI ACTAGT 1 cut(s) 431
BfaI CTAG 6 cut(s) 432, 489, 798, 900, 1301, 1468
BfmI CTRYAG 2 cut(s) 1104, 1179
BfuI GTATCC 1 cut(s) 1158
BglI GCCNNNNNGGC 1 cut(s) 561
BlpI GCTNAGC 1 cut(s) 876
Bme1390I CCNGG 3 cut(s) 118, 872, 1416
Bme18I GGWCC 2 cut(s) 144, 867
BmeRI GACNNNNNGTC 1 cut(s) 1228
BmgT120I GGNCC 7 cut(s) 144, 163, 182, 222, 563, 867, 1069
BmiI GGNNCC 6 cut(s) 37, 146, 868, 869, 1051, 1438
BmrFI CCNGG 3 cut(s) 118, 872, 1416
BmsI GCATC 4 cut(s) 674, 791, 797, 1144
BmtI GCTAGC 1 cut(s) 801
BpmI CTGGAG 1 cut(s) 1068
Bpu1102I GCTNAGC 1 cut(s) 876
Bpu14I TTCGAA 1 cut(s) 368
BpuEI CTTGAG 2 cut(s) 1085, 1211
BpuMI CCSGG 1 cut(s) 872
BsaBI GATNNNNATC 1 cut(s) 21
BsaI GGTCTC 1 cut(s) 35
BsaJI CCNNGG 4 cut(s) 192, 556, 870, 936
BsaXI ACNNNNNCTCC 4 cut(s) 966, 996, 1017, 1047
Bsc4I CCNNNNNNNGG 6 cut(s) 141, 179, 557, 680, 800, 1088
Bse118I RCCGGY 2 cut(s) 230, 425
Bse3DI GCAATG 1 cut(s) 343
Bse8I GATNNNNATC 1 cut(s) 21
BseBI CCWGG 2 cut(s) 118, 1416
BseDI CCNNGG 4 cut(s) 192, 556, 870, 936
BseGI GGATG 1 cut(s) 932
BseJI GATNNNNATC 1 cut(s) 21
BseLI CCNNNNNNNGG 6 cut(s) 141, 179, 557, 680, 800, 1088
BseMI GCAATG 1 cut(s) 343
BseMII CTCAG 1 cut(s) 1050
BseRI GAGGAG 3 cut(s) 799, 1071, 1408
BseSI GKGCMC 1 cut(s) 1345
BseXI GCAGC 9 cut(s) 112, 133, 345, 558, 717, 971, 974, 1118, 1211
BseYI CCCAGC 2 cut(s) 165, 1088
BsgI GTGCAG 1 cut(s) 1273
BshFI GGCC 6 cut(s) 164, 183, 224, 248, 564, 1071
BshNI GGYRCC 1 cut(s) 1436
BsiHKAI GWGCWC 2 cut(s) 380, 1345
BsiSI CCGG 4 cut(s) 161, 231, 426, 872
BslFI GGGAC 2 cut(s) 880, 1027
BslI CCNNNNNNNGG 6 cut(s) 141, 179, 557, 680, 800, 1088
BsmAI GTCTC 1 cut(s) 35
BsmFI GGGAC 2 cut(s) 880, 1027
BsmI GAATGC 2 cut(s) 358, 757
BsnI GGCC 6 cut(s) 164, 183, 224, 248, 564, 1071
Bso31I GGTCTC 1 cut(s) 35
Bsp119I TTCGAA 1 cut(s) 368
Bsp1286I GDGCHC 2 cut(s) 380, 1345
Bsp143I GATC 8 cut(s) 22, 35, 50, 513, 658, 730, 907, 1411
Bsp1720I GCTNAGC 1 cut(s) 876
Bsp19I CCATGG 1 cut(s) 192
BspANI GGCC 6 cut(s) 164, 183, 224, 248, 564, 1071
BspCNI CTCAG 1 cut(s) 1051
BspLI GGNNCC 6 cut(s) 37, 146, 868, 869, 1051, 1438
BspMAI CTGCAG 1 cut(s) 1108
BspOI GCTAGC 1 cut(s) 801
BspPI GGATC 6 cut(s) 30, 43, 45, 725, 902, 1406
BspT104I TTCGAA 1 cut(s) 368
BspT107I GGYRCC 1 cut(s) 1436
BspTNI GGTCTC 1 cut(s) 35
BsrBI CCGCTC 1 cut(s) 158
BsrDI GCAATG 1 cut(s) 343
BsrFI RCCGGY 2 cut(s) 230, 425
BssAI RCCGGY 2 cut(s) 230, 425
BssECI CCNNGG 4 cut(s) 192, 556, 870, 936
BssMI GATC 8 cut(s) 22, 35, 50, 513, 658, 730, 907, 1411
BssT1I CCWWGG 1 cut(s) 192
Bst2UI CCWGG 2 cut(s) 118, 1416
Bst4CI ACNGT 3 cut(s) 548, 824, 1458
BstAPI GCANNNNNTGC 1 cut(s) 362
BstBI TTCGAA 1 cut(s) 368
BstC8I GCNNGC 3 cut(s) 156, 799, 1341
BstDEI CTNAG 3 cut(s) 630, 876, 1059
BstDSI CCRYGG 1 cut(s) 192
BstF5I GGATG 1 cut(s) 932
BstKTI GATC 8 cut(s) 25, 38, 53, 516, 661, 733, 910, 1414
BstMAI GTCTC 1 cut(s) 35
BstMBI GATC 8 cut(s) 22, 35, 50, 513, 658, 730, 907, 1411
BstMWI GCNNNNNNNGC 7 cut(s) 362, 561, 785, 794, 947, 956, 1106
BstNI CCWGG 2 cut(s) 118, 1416
BstNSI RCATGY 1 cut(s) 922
BstSCI CCNGG 3 cut(s) 116, 870, 1414
BstSFI CTRYAG 2 cut(s) 1104, 1179
BstSLI GKGCMC 1 cut(s) 1345
BstV1I GCAGC 9 cut(s) 112, 133, 345, 558, 717, 971, 974, 1118, 1211
BstX2I RGATCY 2 cut(s) 35, 50
BstYI RGATCY 2 cut(s) 35, 50
BsuI GTATCC 1 cut(s) 1158
BsuRI GGCC 6 cut(s) 164, 183, 224, 248, 564, 1071
BtgI CCRYGG 1 cut(s) 192
BtsCI GGATG 1 cut(s) 932
BtsI GCAGTG 2 cut(s) 592, 910
BtsIMutI CAGTG 2 cut(s) 592, 910
Cac8I GCNNGC 3 cut(s) 156, 799, 1341
Cfr10I RCCGGY 2 cut(s) 230, 425
Cfr13I GGNCC 7 cut(s) 144, 163, 182, 222, 563, 867, 1069
Csp6I GTAC 6 cut(s) 429, 768, 983, 1267, 1334, 1369
CspCI CAANNNNNGTGG 2 cut(s) 238, 273
CviAII CATG 4 cut(s) 141, 193, 919, 1245
CviQI GTAC 6 cut(s) 429, 768, 983, 1267, 1334, 1369
DdeI CTNAG 3 cut(s) 630, 876, 1059
DpnI GATC 8 cut(s) 24, 37, 52, 515, 660, 732, 909, 1413
DpnII GATC 8 cut(s) 22, 35, 50, 513, 658, 730, 907, 1411
DraI TTTAAA 1 cut(s) 348
DriI GACNNNNNGTC 1 cut(s) 1228
EaeI YGGCCR 1 cut(s) 246
Eam1105I GACNNNNNGTC 1 cut(s) 1228
Ecl136II GAGCTC 1 cut(s) 378
Eco130I CCWWGG 1 cut(s) 192
Eco24I GRGCYC 1 cut(s) 380
Eco31I GGTCTC 1 cut(s) 35
Eco32I GATATC 1 cut(s) 205
Eco47I GGWCC 2 cut(s) 144, 867
Eco53kI GAGCTC 1 cut(s) 378
Eco57I CTGAAG 1 cut(s) 1424
EcoICRI GAGCTC 1 cut(s) 378
EcoO109I RGGNCCY 2 cut(s) 867, 1069
EcoRI GAATTC 1 cut(s) 4
EcoRII CCWGG 2 cut(s) 116, 1414
EcoRV GATATC 1 cut(s) 205
EcoT14I CCWWGG 1 cut(s) 192
EcoT38I GRGCYC 1 cut(s) 380
ErhI CCWWGG 1 cut(s) 192
FaeI CATG 4 cut(s) 144, 196, 922, 1248
FaqI GGGAC 2 cut(s) 880, 1027
FatI CATG 4 cut(s) 140, 192, 918, 1244
FauI CCCGC 4 cut(s) 105, 121, 163, 802
FblI GTMKAC 1 cut(s) 896
FokI GGATG 1 cut(s) 919
FriOI GRGCYC 1 cut(s) 380
FspBI CTAG 6 cut(s) 432, 489, 798, 900, 1301, 1468
GsaI CCCAGC 2 cut(s) 169, 1092
GsuI CTGGAG 1 cut(s) 1068
HaeIII GGCC 6 cut(s) 164, 183, 224, 248, 564, 1071
HapII CCGG 4 cut(s) 161, 231, 426, 872
Hin1II CATG 4 cut(s) 144, 196, 922, 1248
HincII GTYRAC 1 cut(s) 268
HindII GTYRAC 1 cut(s) 268
HinfI GANTC 3 cut(s) 404, 839, 883
HpaII CCGG 4 cut(s) 161, 231, 426, 872
HphI GGTGA 2 cut(s) 869, 1436
Hpy166II GTNNAC 3 cut(s) 268, 897, 1343
Hpy188I TCNGA 9 cut(s) 35, 200, 255, 552, 560, 750, 838, 1222, 1404
Hpy188III TCNNGA 5 cut(s) 442, 996, 1151, 1190, 1301
Hpy8I GTNNAC 3 cut(s) 268, 897, 1343
Hpy99I CGWCG 1 cut(s) 571
HpyAV CCTTC 3 cut(s) 94, 1082, 1349
HpyCH4III ACNGT 3 cut(s) 548, 824, 1458
HpyCH4IV ACGT 1 cut(s) 1224
HpyCH4V TGCA 9 cut(s) 356, 470, 665, 788, 959, 1106, 1290, 1343, 1430
HpyF10VI GCNNNNNNNGC 7 cut(s) 362, 561, 785, 794, 947, 956, 1106
HpyF3I CTNAG 3 cut(s) 630, 876, 1059
HpySE526I ACGT 1 cut(s) 1224
Hsp92II CATG 4 cut(s) 144, 196, 922, 1248
KflI GGGWCCC 1 cut(s) 867
Kzo9I GATC 8 cut(s) 22, 35, 50, 513, 658, 730, 907, 1411
LmnI GCTCC 3 cut(s) 163, 760, 1379
Lsp1109I GCAGC 9 cut(s) 112, 133, 345, 558, 717, 971, 974, 1118, 1211
LweI GCATC 4 cut(s) 674, 791, 797, 1144
MaeI CTAG 6 cut(s) 432, 489, 798, 900, 1301, 1468
MaeII ACGT 1 cut(s) 1224
MaeIII GTNAC 3 cut(s) 818, 1247, 1418
MalI GATC 8 cut(s) 24, 37, 52, 515, 660, 732, 909, 1413
MbiI CCGCTC 1 cut(s) 158
MboI GATC 8 cut(s) 22, 35, 50, 513, 658, 730, 907, 1411
MboII GAAGA 3 cut(s) 199, 1397, 1417
MflI RGATCY 2 cut(s) 35, 50
MhlI GDGCHC 2 cut(s) 380, 1345
MluCI AATT 5 cut(s) 4, 454, 621, 999, 1129
MmeI TCCRAC 5 cut(s) 33, 63, 178, 816, 958
MroXI GAANNNNTTC 1 cut(s) 625
MseI TTAA 6 cut(s) 324, 347, 498, 528, 687, 1161
MspA1I CMGCKG 2 cut(s) 1088, 1202
MspI CCGG 4 cut(s) 161, 231, 426, 872
MspR9I CCNGG 3 cut(s) 118, 872, 1416
Mva1269I GAATGC 2 cut(s) 358, 757
MvaI CCWGG 2 cut(s) 118, 1416
MwoI GCNNNNNNNGC 7 cut(s) 362, 561, 785, 794, 947, 956, 1106
NciI CCSGG 1 cut(s) 872
NcoI CCATGG 1 cut(s) 192
NdeII GATC 8 cut(s) 22, 35, 50, 513, 658, 730, 907, 1411
NheI GCTAGC 1 cut(s) 797
NlaIII CATG 4 cut(s) 144, 196, 922, 1248
NlaIV GGNNCC 6 cut(s) 37, 146, 868, 869, 1051, 1438
NmeAIII GCCGAG 1 cut(s) 917
NspI RCATGY 1 cut(s) 922
NspV TTCGAA 1 cut(s) 368
PciI ACATGT 1 cut(s) 918
PcsI WCGNNNNNNNCGW 1 cut(s) 251
PctI GAATGC 2 cut(s) 358, 757
PdmI GAANNNNTTC 1 cut(s) 625
PfeI GAWTC 3 cut(s) 404, 839, 883
PflMI CCANNNNNTGG 2 cut(s) 141, 680
PpuMI RGGWCCY 1 cut(s) 867
PscI ACATGT 1 cut(s) 918
Psp124BI GAGCTC 1 cut(s) 380
Psp5II RGGWCCY 1 cut(s) 867
Psp6I CCWGG 2 cut(s) 116, 1414
PspFI CCCAGC 2 cut(s) 165, 1088
PspGI CCWGG 2 cut(s) 116, 1414
PspN4I GGNNCC 6 cut(s) 37, 146, 868, 869, 1051, 1438
PspPI GGNCC 7 cut(s) 144, 163, 182, 222, 563, 867, 1069
PspPPI RGGWCCY 1 cut(s) 867
PstI CTGCAG 1 cut(s) 1108
PsuI RGATCY 2 cut(s) 35, 50
PvuII CAGCTG 2 cut(s) 1088, 1202
RsaI GTAC 6 cut(s) 430, 769, 984, 1268, 1335, 1370
RsaNI GTAC 6 cut(s) 429, 768, 983, 1267, 1334, 1369
SacI GAGCTC 1 cut(s) 380
SaqAI TTAA 6 cut(s) 324, 347, 498, 528, 687, 1161
Sau3AI GATC 8 cut(s) 22, 35, 50, 513, 658, 730, 907, 1411
Sau96I GGNCC 7 cut(s) 144, 163, 182, 222, 563, 867, 1069
ScrFI CCNGG 3 cut(s) 118, 872, 1416
SduI GDGCHC 2 cut(s) 380, 1345
SfaNI GCATC 4 cut(s) 674, 791, 797, 1144
SfcI CTRYAG 2 cut(s) 1104, 1179
SfuI TTCGAA 1 cut(s) 368
SinI GGWCC 2 cut(s) 144, 867
SmlI CTYRAG 2 cut(s) 1064, 1190
SmoI CTYRAG 2 cut(s) 1064, 1190
SpeI ACTAGT 1 cut(s) 431
Sse9I AATT 5 cut(s) 4, 454, 621, 999, 1129
SspMI CTAG 6 cut(s) 432, 489, 798, 900, 1301, 1468
SstI GAGCTC 1 cut(s) 380
StyD4I CCNGG 3 cut(s) 116, 870, 1414
StyI CCWWGG 1 cut(s) 192
TaaI ACNGT 3 cut(s) 548, 824, 1458
TaiI ACGT 1 cut(s) 1227
TaqI TCGA 6 cut(s) 15, 21, 368, 386, 668, 1232
TasI AATT 5 cut(s) 4, 454, 621, 999, 1129
TatI WGTACW 3 cut(s) 982, 1266, 1368
TauI GCSGC 3 cut(s) 172, 782, 804
TfiI GAWTC 3 cut(s) 404, 839, 883
Tru1I TTAA 6 cut(s) 324, 347, 498, 528, 687, 1161
Tru9I TTAA 6 cut(s) 324, 347, 498, 528, 687, 1161
TscAI CASTG 2 cut(s) 592, 910
TseI GCWGC 9 cut(s) 100, 121, 333, 571, 705, 959, 962, 1106, 1199
TspDTI ATGAA 4 cut(s) 17, 831, 1233, 1368
TspGWI ACGGA 1 cut(s) 1031
TspRI CASTG 2 cut(s) 592, 910
Van91I CCANNNNNTGG 2 cut(s) 141, 680
VneI GTGCAC 1 cut(s) 1341
VpaK11BI GGWCC 2 cut(s) 144, 867
XapI RAATTY 1 cut(s) 4
XbaI TCTAGA 1 cut(s) 1300
XceI RCATGY 1 cut(s) 922
XmiI GTMKAC 1 cut(s) 896
XmnI GAANNNNTTC 1 cut(s) 625
XspI CTAG 6 cut(s) 432, 489, 798, 900, 1301, 1468
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.