Rorug04G0356800

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0018432
Physical Location & Seq
Reverse (-)
52897847 .. 52901703
3857 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0356800.1

Sequence Viewer

Length: 1212 bp
ATGTTGGGAACGGGATTGCAGGTGACGCGTGGCCGCGGAGAAGATCGATTTTACAATCCGCCCAGAGCGCGTAGGGCCCACCAGAGCCAGAAAGCCGCCGAGCAACTTCGCCGAGCTCAGAGCGACGTCACGCCCAGCCAATCGCCTTCGCTCAAGGGCGGCAACCCGAACCGGGAGCCGGAGAACCATGTGCAGCCTCCCAAGCCGGTCGCCGTACCCGCTGGCGAGCCGGCCGCGAAGCCGTTGAGTAATCTCGAGCGGTTCTTGCAGTCCATCACGCCCTCAGTTCCTGCTCAGCACCTCTCCAAGACGACGATGAGAGAATTGAGTACATGTGACGAGGAGTCTCAGCCATACTTTGTTCTTGGTGATCTGTGGGAGTCTTTCAAGGAGTGGAGCGCTTACGGTGCCGGAGTGCCTCTGATTTTGAATGATAGTGACTTTGTGGTCCAGTACTATGTCCCTTATTTATCCGGTATTCAAATATACGGCAACTCTATGAAATTGTCCTCTAAGTCAAGGCGACCAGATGAGGATAGTGACAGTGATTTTCGGGATTCTAGTAGTGATGGTAGCTGTGATGTTGAACCAGTTAAAATAAAATATTTGAGGGAGCAGCGGAATCATCAAATGTTGAGTGAAATTCCTCAAAGGTTAGAAAGCATATCTCTGAGAGATCAGCATTATCCACTCCAAGAGGACTGCTCCAGTGATGAGGGTGAACCTGTAAATTCCCAAGGTTGCGTATTATTTGAGTATTTTGAACGTGATCTTCCTTATTGCCGTGAGCCTTTAGCTGATAAGATATTAGATCTTGCGTTTCGTTTTCCTGAGCTGAAGACAATAAGAAGTTGTGATCTACTGGCTTCCAGTTGGATTTCTGTTGCATGGTATCCAATTTACAGGATTCCAACAGGACCAACTTTAAAGGATCTTGATGCGTGCTTTCTGTCATACCATTCACTTTTTACCCCCGTGGGAGGTGTACAAGATCCCCGGGCTACTGTAGTAACCTATCCGAGTGACATGGATGGTATCCCTAAGATGTCCTTACCTGTTTTTGGTCTTGCTTCATACAAGTTCAGAGGGTCCTTGTGGACTCCTAGTGGGGGATTGGAACGACAATTAGCGAACTCCCTCTTGCAGGCCACTGATGACTTTCTAAGGCTGCATCAGGTCAATCATCCAGATTTTCTGTTCTTCAGCCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

403

Amino Acids

45.46

Weight (kDa)

5.49

Isoelectric Point (pI)

57.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF789 PF05623 83 - 401 2e-101 Protein of unknown function (DUF789)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018432)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g35350
pyrus_communis pycom13g07250 pycom16g07220
rosa_laevigata RLG00000005782
rosa_roxburghii Rroxscaffold_5G00385460
rosa_rugosa Rorug04G0356800
rosa_samantha Rh4AG418400 Rh4BG430100 Rh4CG444900 Rh4DG426100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 10
AasI GACNNNNNNGTC 1 cut(s) 446
AatII GACGTC 1 cut(s) 129
Acc36I ACCTGC 1 cut(s) 10
AccB1I GGYRCC 1 cut(s) 407
AccBSI CCGCTC 1 cut(s) 259
AccII CGCG 4 cut(s) 28, 36, 70, 236
AciI CCGC 9 cut(s) 34, 36, 59, 96, 159, 219, 234, 259, 619
AclWI GGATC 2 cut(s) 939, 986
AcoI YGGCCR 2 cut(s) 31, 231
AcsI RAATTY 2 cut(s) 642, 730
AcuI CTGAAG 2 cut(s) 857, 1186
AcyI GRCGYC 1 cut(s) 126
AfaI GTAC 4 cut(s) 216, 331, 455, 987
AfeI AGCGCT 1 cut(s) 400
AfiI CCNNNNNNNGG 6 cut(s) 172, 178, 980, 1061, 1109, 1144
AflIII ACRYGT 2 cut(s) 26, 332
AgsI TTSAA 5 cut(s) 388, 430, 482, 587, 764
AhdI GACNNNNNGTC 1 cut(s) 343
AluBI AGCT 4 cut(s) 116, 576, 797, 835
AluI AGCT 4 cut(s) 116, 576, 797, 835
Alw21I GWGCWC 1 cut(s) 118
Alw26I GTCTC 1 cut(s) 351
AlwI GGATC 2 cut(s) 939, 986
AlwNI CAGNNNCTG 1 cut(s) 290
Ama87I CYCGRG 2 cut(s) 254, 996
Aor51HI AGCGCT 1 cut(s) 400
AoxI GGCC 4 cut(s) 31, 75, 231, 1146
ApaI GGGCCC 1 cut(s) 79
ApeKI GCWGC 3 cut(s) 193, 616, 1168
ApoI RAATTY 2 cut(s) 642, 730
AspLEI GCGC 2 cut(s) 70, 401
AspS9I GGNCC 5 cut(s) 75, 76, 448, 917, 1089
AsuC2I CCSGG 3 cut(s) 173, 997, 998
AsuHPI GGTGA 3 cut(s) 34, 380, 731
AvaI CYCGRG 2 cut(s) 254, 996
AvaII GGWCC 3 cut(s) 448, 917, 1089
BaeGI GKGCMC 1 cut(s) 79
BanI GGYRCC 1 cut(s) 407
BanII GRGCYC 2 cut(s) 79, 118
BbsI GAAGAC 1 cut(s) 845
Bbv12I GWGCWC 1 cut(s) 118
BbvI GCAGC 3 cut(s) 205, 628, 1155
BccI CCATC 3 cut(s) 281, 563, 1025
BceAI ACGGC 5 cut(s) 197, 226, 505, 768, 1191
BciVI GTATCC 2 cut(s) 903, 1046
BcnI CCSGG 3 cut(s) 173, 997, 998
BcoDI GTCTC 1 cut(s) 351
BfaI CTAG 2 cut(s) 561, 1104
BfmI CTRYAG 1 cut(s) 1005
BfoI RGCGCY 1 cut(s) 402
BfuAI ACCTGC 1 cut(s) 10
BfuI GTATCC 2 cut(s) 903, 1046
BglII AGATCT 1 cut(s) 811
BisI GCNGC 7 cut(s) 34, 96, 160, 194, 234, 617, 1169
BlpI GCTNAGC 1 cut(s) 294
BlsI GCNGC 7 cut(s) 35, 97, 161, 195, 235, 618, 1170
BmcAI AGTACT 1 cut(s) 455
Bme1390I CCNGG 3 cut(s) 173, 997, 998
Bme18I GGWCC 3 cut(s) 448, 917, 1089
BmeRI GACNNNNNGTC 1 cut(s) 343
BmeT110I CYCGRG 2 cut(s) 254, 996
BmgT120I GGNCC 5 cut(s) 75, 76, 448, 917, 1089
BmiI GGNNCC 4 cut(s) 77, 177, 409, 1090
BmrFI CCNGG 3 cut(s) 173, 997, 998
BmsI GCATC 2 cut(s) 928, 1180
BpiI GAAGAC 1 cut(s) 845
BplI GAGNNNNNCTC 2 cut(s) 689, 721
BpmI CTGGAG 1 cut(s) 691
Bpu10I CCTNAGC 1 cut(s) 831
Bpu1102I GCTNAGC 1 cut(s) 294
BpuEI CTTGAG 1 cut(s) 137
BpuMI CCSGG 3 cut(s) 173, 997, 998
Bsa29I ATCGAT 1 cut(s) 46
BsaHI GRCGYC 1 cut(s) 126
BsaJI CCNNGG 5 cut(s) 34, 736, 975, 995, 996
BsaWI WCCGGW 1 cut(s) 473
Bsc4I CCNNNNNNNGG 6 cut(s) 172, 178, 980, 1061, 1109, 1144
Bse118I RCCGGY 2 cut(s) 205, 229
Bse1I ACTGG 5 cut(s) 451, 590, 708, 867, 870
BseCI ATCGAT 1 cut(s) 46
BseDI CCNNGG 5 cut(s) 34, 736, 975, 995, 996
BseGI GGATG 2 cut(s) 1036, 1183
BseLI CCNNNNNNNGG 6 cut(s) 172, 178, 980, 1061, 1109, 1144
BseMII CTCAG 6 cut(s) 131, 297, 308, 362, 662, 822
BseNI ACTGG 5 cut(s) 451, 590, 708, 867, 870
BseRI GAGGAG 1 cut(s) 356
BseSI GKGCMC 1 cut(s) 79
BseX3I CGGCCG 1 cut(s) 231
BseXI GCAGC 3 cut(s) 205, 628, 1155
BseYI CCCAGC 1 cut(s) 134
BsgI GTGCAG 1 cut(s) 212
Bsh1236I CGCG 4 cut(s) 28, 36, 70, 236
Bsh1285I CGRYCG 2 cut(s) 210, 234
BshFI GGCC 4 cut(s) 33, 77, 233, 1148
BshNI GGYRCC 1 cut(s) 407
BshVI ATCGAT 1 cut(s) 46
BsiEI CGRYCG 2 cut(s) 210, 234
BsiHKAI GWGCWC 1 cut(s) 118
BsiHKCI CYCGRG 2 cut(s) 254, 996
BsiSI CCGG 7 cut(s) 172, 179, 206, 230, 411, 474, 997
BslFI GGGAC 1 cut(s) 446
BslI CCNNNNNNNGG 6 cut(s) 172, 178, 980, 1061, 1109, 1144
BsmAI GTCTC 1 cut(s) 351
BsmFI GGGAC 1 cut(s) 446
BsnI GGCC 4 cut(s) 33, 77, 233, 1148
BsoBI CYCGRG 2 cut(s) 254, 996
Bsp120I GGGCCC 1 cut(s) 75
Bsp1286I GDGCHC 2 cut(s) 79, 118
Bsp1407I TGTACA 1 cut(s) 985
Bsp143I GATC 8 cut(s) 43, 370, 676, 769, 811, 856, 931, 991
Bsp1720I GCTNAGC 1 cut(s) 294
BspACI CCGC 9 cut(s) 34, 36, 59, 96, 159, 219, 234, 259, 619
BspANI GGCC 4 cut(s) 33, 77, 233, 1148
BspCNI CTCAG 6 cut(s) 130, 296, 307, 361, 663, 823
BspDI ATCGAT 1 cut(s) 46
BspFNI CGCG 4 cut(s) 28, 36, 70, 236
BspLI GGNNCC 4 cut(s) 77, 177, 409, 1090
BspMI ACCTGC 1 cut(s) 10
BspPI GGATC 2 cut(s) 939, 986
BspT107I GGYRCC 1 cut(s) 407
BsrBI CCGCTC 1 cut(s) 259
BsrFI RCCGGY 2 cut(s) 205, 229
BsrGI TGTACA 1 cut(s) 985
BsrI ACTGG 5 cut(s) 451, 590, 708, 867, 870
BssAI RCCGGY 2 cut(s) 205, 229
BssECI CCNNGG 5 cut(s) 34, 736, 975, 995, 996
BssMI GATC 8 cut(s) 43, 370, 676, 769, 811, 856, 931, 991
BssNI GRCGYC 1 cut(s) 126
BssT1I CCWWGG 1 cut(s) 736
Bst4CI ACNGT 3 cut(s) 407, 545, 1006
BstACI GRCGYC 1 cut(s) 126
BstAUI TGTACA 1 cut(s) 985
BstC8I GCNNGC 5 cut(s) 223, 227, 231, 943, 1146
BstDEI CTNAG 9 cut(s) 117, 283, 294, 348, 513, 671, 831, 1041, 1163
BstDSI CCRYGG 2 cut(s) 34, 975
BstENI CCTNNNNNAGG 1 cut(s) 1142
BstF5I GGATG 2 cut(s) 1036, 1183
BstFNI CGCG 4 cut(s) 28, 36, 70, 236
BstH2I RGCGCY 1 cut(s) 402
BstHHI GCGC 2 cut(s) 70, 401
BstKTI GATC 8 cut(s) 46, 373, 679, 772, 814, 859, 934, 994
BstMAI GTCTC 1 cut(s) 351
BstMBI GATC 8 cut(s) 43, 370, 676, 769, 811, 856, 931, 991
BstMCI CGRYCG 2 cut(s) 210, 234
BstMWI GCNNNNNNNGC 7 cut(s) 25, 67, 74, 202, 218, 265, 407
BstNSI RCATGY 1 cut(s) 336
BstSCI CCNGG 3 cut(s) 171, 995, 996
BstSFI CTRYAG 1 cut(s) 1005
BstSLI GKGCMC 1 cut(s) 79
BstUI CGCG 4 cut(s) 28, 36, 70, 236
BstV1I GCAGC 3 cut(s) 205, 628, 1155
BstV2I GAAGAC 1 cut(s) 845
BstX2I RGATCY 3 cut(s) 811, 931, 991
BstYI RGATCY 3 cut(s) 811, 931, 991
BstZI CGGCCG 1 cut(s) 231
Bsu15I ATCGAT 1 cut(s) 46
BsuI GTATCC 2 cut(s) 903, 1046
BsuRI GGCC 4 cut(s) 33, 77, 233, 1148
BsuTUI ATCGAT 1 cut(s) 46
BtgI CCRYGG 2 cut(s) 34, 975
BtsCI GGATG 2 cut(s) 1036, 1183
BtsIMutI CAGTG 3 cut(s) 550, 715, 1149
BveI ACCTGC 1 cut(s) 10
Cac8I GCNNGC 5 cut(s) 223, 227, 231, 943, 1146
CaiI CAGNNNCTG 1 cut(s) 290
CfoI GCGC 2 cut(s) 70, 401
Cfr10I RCCGGY 2 cut(s) 205, 229
Cfr13I GGNCC 5 cut(s) 75, 76, 448, 917, 1089
Cfr42I CCGCGG 1 cut(s) 37
Cfr9I CCCGGG 1 cut(s) 996
ClaI ATCGAT 1 cut(s) 46
CseI GACGC 1 cut(s) 34
Csp6I GTAC 4 cut(s) 215, 330, 454, 986
CviAII CATG 4 cut(s) 188, 333, 888, 1027
CviQI GTAC 4 cut(s) 215, 330, 454, 986
DdeI CTNAG 9 cut(s) 117, 283, 294, 348, 513, 671, 831, 1041, 1163
DpnI GATC 8 cut(s) 45, 372, 678, 771, 813, 858, 933, 993
DpnII GATC 8 cut(s) 43, 370, 676, 769, 811, 856, 931, 991
DraI TTTAAA 1 cut(s) 927
DrdI GACNNNNNNGTC 1 cut(s) 446
DriI GACNNNNNGTC 1 cut(s) 343
DseDI GACNNNNNNGTC 1 cut(s) 446
EaeI YGGCCR 2 cut(s) 31, 231
EagI CGGCCG 1 cut(s) 231
Eam1105I GACNNNNNGTC 1 cut(s) 343
EciI GGCGGA 1 cut(s) 48
Ecl136II GAGCTC 1 cut(s) 116
EclXI CGGCCG 1 cut(s) 231
Eco130I CCWWGG 1 cut(s) 736
Eco24I GRGCYC 2 cut(s) 79, 118
Eco47I GGWCC 3 cut(s) 448, 917, 1089
Eco47III AGCGCT 1 cut(s) 400
Eco52I CGGCCG 1 cut(s) 231
Eco53kI GAGCTC 1 cut(s) 116
Eco57I CTGAAG 2 cut(s) 857, 1186
Eco88I CYCGRG 2 cut(s) 254, 996
EcoICRI GAGCTC 1 cut(s) 116
EcoNI CCTNNNNNAGG 1 cut(s) 1142
EcoO109I RGGNCCY 2 cut(s) 75, 1089
EcoT14I CCWWGG 1 cut(s) 736
EcoT38I GRGCYC 2 cut(s) 79, 118
ErhI CCWWGG 1 cut(s) 736
FaeI CATG 4 cut(s) 191, 336, 891, 1030
FalI AAGNNNNNCTT 2 cut(s) 1034, 1066
FaqI GGGAC 1 cut(s) 446
FatI CATG 4 cut(s) 187, 332, 887, 1026
FauI CCCGC 1 cut(s) 226
Fnu4HI GCNGC 7 cut(s) 34, 96, 160, 194, 234, 617, 1169
FokI GGATG 2 cut(s) 1043, 1170
FriOI GRGCYC 2 cut(s) 79, 118
Fsp4HI GCNGC 7 cut(s) 34, 96, 160, 194, 234, 617, 1169
FspBI CTAG 2 cut(s) 561, 1104
GlaI GCGC 2 cut(s) 69, 400
GluI GCNGC 7 cut(s) 34, 96, 160, 194, 234, 617, 1169
GsaI CCCAGC 1 cut(s) 138
GsuI CTGGAG 1 cut(s) 691
HaeII RGCGCY 1 cut(s) 402
HaeIII GGCC 4 cut(s) 33, 77, 233, 1148
HapII CCGG 7 cut(s) 172, 179, 206, 230, 411, 474, 997
HgaI GACGC 1 cut(s) 34
HhaI GCGC 2 cut(s) 70, 401
Hin1I GRCGYC 1 cut(s) 126
Hin1II CATG 4 cut(s) 191, 336, 891, 1030
Hin6I GCGC 2 cut(s) 68, 399
HinP1I GCGC 2 cut(s) 68, 399
HinfI GANTC 6 cut(s) 344, 380, 557, 622, 907, 1099
HpaII CCGG 7 cut(s) 172, 179, 206, 230, 411, 474, 997
HphI GGTGA 3 cut(s) 34, 380, 731
Hpy166II GTNNAC 3 cut(s) 722, 986, 1098
Hpy188I TCNGA 5 cut(s) 120, 423, 672, 1020, 1085
Hpy188III TCNNGA 5 cut(s) 254, 554, 830, 935, 1187
Hpy8I GTNNAC 3 cut(s) 722, 986, 1098
Hpy99I CGWCG 2 cut(s) 128, 316
HpyAV CCTTC 1 cut(s) 156
HpyCH4III ACNGT 3 cut(s) 407, 545, 1006
HpyCH4IV ACGT 2 cut(s) 126, 766
HpyCH4V TGCA 6 cut(s) 19, 193, 268, 887, 1144, 1171
HpyF10VI GCNNNNNNNGC 7 cut(s) 25, 67, 74, 202, 218, 265, 407
HpyF3I CTNAG 9 cut(s) 117, 283, 294, 348, 513, 671, 831, 1041, 1163
HpySE526I ACGT 2 cut(s) 126, 766
Hsp92I GRCGYC 1 cut(s) 126
Hsp92II CATG 4 cut(s) 191, 336, 891, 1030
HspAI GCGC 2 cut(s) 68, 399
KroI GCCGGC 1 cut(s) 229
KroNI GCCGGC 1 cut(s) 231
KspI CCGCGG 1 cut(s) 37
Kzo9I GATC 8 cut(s) 43, 370, 676, 769, 811, 856, 931, 991
LmnI GCTCC 4 cut(s) 175, 396, 613, 710
Lsp1109I GCAGC 3 cut(s) 205, 628, 1155
LweI GCATC 2 cut(s) 928, 1180
MaeI CTAG 2 cut(s) 561, 1104
MaeII ACGT 2 cut(s) 126, 766
MaeIII GTNAC 7 cut(s) 22, 127, 335, 437, 539, 1009, 1022
MalI GATC 8 cut(s) 45, 372, 678, 771, 813, 858, 933, 993
MbiI CCGCTC 1 cut(s) 259
MboI GATC 8 cut(s) 43, 370, 676, 769, 811, 856, 931, 991
MboII GAAGA 4 cut(s) 53, 764, 850, 1192
MflI RGATCY 3 cut(s) 811, 931, 991
MhlI GDGCHC 2 cut(s) 79, 118
MluCI AATT 6 cut(s) 323, 503, 642, 730, 897, 1124
MluI ACGCGT 1 cut(s) 26
MlyI GAGTC 3 cut(s) 353, 389, 1093
MmeI TCCRAC 2 cut(s) 854, 935
MroNI GCCGGC 1 cut(s) 229
MseI TTAA 2 cut(s) 594, 926
MspA1I CMGCKG 3 cut(s) 36, 221, 619
MspI CCGG 7 cut(s) 172, 179, 206, 230, 411, 474, 997
MspR9I CCNGG 3 cut(s) 173, 997, 998
MvnI CGCG 4 cut(s) 28, 36, 70, 236
MwoI GCNNNNNNNGC 7 cut(s) 25, 67, 74, 202, 218, 265, 407
NaeI GCCGGC 1 cut(s) 231
NciI CCSGG 3 cut(s) 173, 997, 998
NdeII GATC 8 cut(s) 43, 370, 676, 769, 811, 856, 931, 991
NgoMIV GCCGGC 1 cut(s) 229
NlaIII CATG 4 cut(s) 191, 336, 891, 1030
NlaIV GGNNCC 4 cut(s) 77, 177, 409, 1090
NmeAIII GCCGAG 2 cut(s) 124, 137
NmuCI GTSAC 6 cut(s) 22, 127, 335, 437, 539, 1022
NspI RCATGY 1 cut(s) 336
PaeR7I CTCGAG 1 cut(s) 254
PaqCI CACCTGC 1 cut(s) 10
PciI ACATGT 1 cut(s) 332
PdiI GCCGGC 1 cut(s) 231
PfeI GAWTC 3 cut(s) 557, 622, 907
PkrI GCNGC 7 cut(s) 35, 97, 161, 195, 235, 618, 1170
PleI GAGTC 3 cut(s) 352, 388, 1093
PpsI GAGTC 3 cut(s) 352, 388, 1093
PpuMI RGGWCCY 1 cut(s) 1089
PscI ACATGT 1 cut(s) 332
Psp124BI GAGCTC 1 cut(s) 118
Psp5II RGGWCCY 1 cut(s) 1089
PspFI CCCAGC 1 cut(s) 134
PspN4I GGNNCC 4 cut(s) 77, 177, 409, 1090
PspOMI GGGCCC 1 cut(s) 75
PspPI GGNCC 5 cut(s) 75, 76, 448, 917, 1089
PspPPI RGGWCCY 1 cut(s) 1089
PstNI CAGNNNCTG 1 cut(s) 290
PsuI RGATCY 3 cut(s) 811, 931, 991
RsaI GTAC 4 cut(s) 216, 331, 455, 987
RsaNI GTAC 4 cut(s) 215, 330, 454, 986
SacI GAGCTC 1 cut(s) 118
SacII CCGCGG 1 cut(s) 37
SaqAI TTAA 2 cut(s) 594, 926
SatI GCNGC 7 cut(s) 34, 96, 160, 194, 234, 617, 1169
Sau3AI GATC 8 cut(s) 43, 370, 676, 769, 811, 856, 931, 991
Sau96I GGNCC 5 cut(s) 75, 76, 448, 917, 1089
ScaI AGTACT 1 cut(s) 455
SchI GAGTC 3 cut(s) 353, 389, 1093
ScrFI CCNGG 3 cut(s) 173, 997, 998
SduI GDGCHC 2 cut(s) 79, 118
SfaNI GCATC 2 cut(s) 928, 1180
SfcI CTRYAG 1 cut(s) 1005
Sfr274I CTCGAG 1 cut(s) 254
Sfr303I CCGCGG 1 cut(s) 37
SgrBI CCGCGG 1 cut(s) 37
SinI GGWCC 3 cut(s) 448, 917, 1089
SlaI CTCGAG 1 cut(s) 254
SmaI CCCGGG 1 cut(s) 998
SmlI CTYRAG 2 cut(s) 152, 254
SmoI CTYRAG 2 cut(s) 152, 254
Sse9I AATT 6 cut(s) 323, 503, 642, 730, 897, 1124
SsiI CCGC 9 cut(s) 34, 36, 59, 96, 159, 219, 234, 259, 619
SspI AATATT 1 cut(s) 605
SspMI CTAG 2 cut(s) 561, 1104
SstI GAGCTC 1 cut(s) 118
StyD4I CCNGG 3 cut(s) 171, 995, 996
StyI CCWWGG 1 cut(s) 736
TaaI ACNGT 3 cut(s) 407, 545, 1006
TaiI ACGT 2 cut(s) 129, 769
TaqI TCGA 2 cut(s) 46, 255
TasI AATT 6 cut(s) 323, 503, 642, 730, 897, 1124
TatI WGTACW 3 cut(s) 329, 453, 985
TauI GCSGC 4 cut(s) 36, 98, 162, 236
TfiI GAWTC 3 cut(s) 557, 622, 907
Tru1I TTAA 2 cut(s) 594, 926
Tru9I TTAA 2 cut(s) 594, 926
TscAI CASTG 3 cut(s) 550, 715, 1156
TseFI GTSAC 6 cut(s) 22, 127, 335, 437, 539, 1022
TseI GCWGC 3 cut(s) 193, 616, 1168
Tsp45I GTSAC 6 cut(s) 22, 127, 335, 437, 539, 1022
TspDTI ATGAA 2 cut(s) 515, 1062
TspMI CCCGGG 1 cut(s) 996
TspRI CASTG 3 cut(s) 550, 715, 1156
VpaK11BI GGWCC 3 cut(s) 448, 917, 1089
XagI CCTNNNNNAGG 1 cut(s) 1142
XapI RAATTY 2 cut(s) 642, 730
XceI RCATGY 1 cut(s) 336
XhoI CTCGAG 1 cut(s) 254
XmaI CCCGGG 1 cut(s) 996
XspI CTAG 2 cut(s) 561, 1104
ZraI GACGTC 1 cut(s) 127
ZrmI AGTACT 1 cut(s) 455
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.