Pentatricopeptide repeat-containing protein At3g14580
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G14580 |
| fragaria_vesca | FvH4_3g16970 |
| malus_domestica | MD11G1276100.v1.1 |
| prunus_persica | Prupe.4G152100_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0028281 |
| rosa_laevigata | RLG00000033079 |
| rosa_multiflora | Rmu_sc0001571.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00051440 |
| rosa_rugosa | Rorug05G0105500 |
| rosa_samantha | Rh5AG199000 Rh5BG197500 Rh5CG217300 Rh5DG199200 |
| rosa_wichuraiana | Rw5G018150 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 65 |
| AccI | GTMKAC | 1 cut(s) | 141 |
| AclWI | GGATC | 1 cut(s) | 140 |
| AcsI | RAATTY | 1 cut(s) | 242 |
| AcuI | CTGAAG | 2 cut(s) | 116, 222 |
| AgsI | TTSAA | 1 cut(s) | 203 |
| AjnI | CCWGG | 1 cut(s) | 79 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 98, 130 |
| AluBI | AGCT | 3 cut(s) | 154, 193, 236 |
| AluI | AGCT | 3 cut(s) | 154, 193, 236 |
| Alw21I | GWGCWC | 2 cut(s) | 111, 156 |
| Alw26I | GTCTC | 1 cut(s) | 52 |
| AlwI | GGATC | 1 cut(s) | 140 |
| ApoI | RAATTY | 1 cut(s) | 242 |
| BaeGI | GKGCMC | 1 cut(s) | 68 |
| BanI | GGYRCC | 1 cut(s) | 65 |
| BanII | GRGCYC | 1 cut(s) | 156 |
| BbsI | GAAGAC | 1 cut(s) | 16 |
| Bbv12I | GWGCWC | 2 cut(s) | 111, 156 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 118, 152 |
| BciT130I | CCWGG | 1 cut(s) | 81 |
| BcoDI | GTCTC | 1 cut(s) | 52 |
| BfaI | CTAG | 1 cut(s) | 185 |
| BglII | AGATCT | 1 cut(s) | 175 |
| Bme1390I | CCNGG | 1 cut(s) | 81 |
| BmiI | GGNNCC | 1 cut(s) | 67 |
| BmrFI | CCNGG | 1 cut(s) | 81 |
| BmsI | GCATC | 1 cut(s) | 44 |
| BoxI | GACNNNNGTC | 1 cut(s) | 137 |
| BpiI | GAAGAC | 1 cut(s) | 16 |
| Bpu10I | CCTNAGC | 1 cut(s) | 150 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 98, 128 |
| BseBI | CCWGG | 1 cut(s) | 81 |
| BseGI | GGATG | 2 cut(s) | 35, 262 |
| BseMII | CTCAG | 1 cut(s) | 141 |
| BseSI | GKGCMC | 1 cut(s) | 68 |
| BseYI | CCCAGC | 1 cut(s) | 232 |
| BshNI | GGYRCC | 1 cut(s) | 65 |
| BsiHKAI | GWGCWC | 2 cut(s) | 111, 156 |
| BsmAI | GTCTC | 1 cut(s) | 52 |
| Bsp1286I | GDGCHC | 3 cut(s) | 68, 111, 156 |
| Bsp143I | GATC | 3 cut(s) | 43, 145, 175 |
| BspCNI | CTCAG | 1 cut(s) | 142 |
| BspLI | GGNNCC | 1 cut(s) | 67 |
| BspPI | GGATC | 1 cut(s) | 140 |
| BspT107I | GGYRCC | 1 cut(s) | 65 |
| BssMI | GATC | 3 cut(s) | 43, 145, 175 |
| Bst2UI | CCWGG | 1 cut(s) | 81 |
| Bst6I | CTCTTC | 1 cut(s) | 8 |
| BstDEI | CTNAG | 1 cut(s) | 150 |
| BstF5I | GGATG | 2 cut(s) | 35, 262 |
| BstKTI | GATC | 3 cut(s) | 46, 148, 178 |
| BstMAI | GTCTC | 1 cut(s) | 52 |
| BstMBI | GATC | 3 cut(s) | 43, 145, 175 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 106 |
| BstNI | CCWGG | 1 cut(s) | 81 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 137 |
| BstSCI | CCNGG | 1 cut(s) | 79 |
| BstSLI | GKGCMC | 1 cut(s) | 68 |
| BstV2I | GAAGAC | 1 cut(s) | 16 |
| BstX2I | RGATCY | 1 cut(s) | 175 |
| BstYI | RGATCY | 1 cut(s) | 175 |
| BtsCI | GGATG | 2 cut(s) | 35, 262 |
| BtsIMutI | CAGTG | 1 cut(s) | 280 |
| CviJI | RGCY | 4 cut(s) | 84, 154, 193, 236 |
| CviKI_1 | RGCY | 4 cut(s) | 84, 154, 193, 236 |
| DdeI | CTNAG | 1 cut(s) | 150 |
| DpnI | GATC | 3 cut(s) | 45, 147, 177 |
| DpnII | GATC | 3 cut(s) | 43, 145, 175 |
| Eam1104I | CTCTTC | 1 cut(s) | 8 |
| EarI | CTCTTC | 1 cut(s) | 8 |
| Ecl136II | GAGCTC | 1 cut(s) | 154 |
| Eco24I | GRGCYC | 1 cut(s) | 156 |
| Eco53kI | GAGCTC | 1 cut(s) | 154 |
| Eco57I | CTGAAG | 2 cut(s) | 116, 222 |
| EcoICRI | GAGCTC | 1 cut(s) | 154 |
| EcoRII | CCWGG | 1 cut(s) | 79 |
| EcoT38I | GRGCYC | 1 cut(s) | 156 |
| FaiI | YATR | 1 cut(s) | 229 |
| FblI | GTMKAC | 1 cut(s) | 141 |
| FokI | GGATG | 2 cut(s) | 22, 269 |
| FriOI | GRGCYC | 1 cut(s) | 156 |
| FspBI | CTAG | 1 cut(s) | 185 |
| GsaI | CCCAGC | 1 cut(s) | 236 |
| HindIII | AAGCTT | 1 cut(s) | 191 |
| Hpy166II | GTNNAC | 1 cut(s) | 142 |
| Hpy188I | TCNGA | 2 cut(s) | 48, 241 |
| Hpy188III | TCNNGA | 4 cut(s) | 118, 149, 185, 248 |
| Hpy8I | GTNNAC | 1 cut(s) | 142 |
| HpyAV | CCTTC | 2 cut(s) | 86, 97 |
| HpyCH4V | TGCA | 1 cut(s) | 198 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 106 |
| HpyF3I | CTNAG | 1 cut(s) | 150 |
| Kzo9I | GATC | 3 cut(s) | 43, 145, 175 |
| LmnI | GCTCC | 1 cut(s) | 106 |
| LweI | GCATC | 1 cut(s) | 44 |
| MaeI | CTAG | 1 cut(s) | 185 |
| MalI | GATC | 3 cut(s) | 45, 147, 177 |
| MboI | GATC | 3 cut(s) | 43, 145, 175 |
| MboII | GAAGA | 2 cut(s) | 16, 25 |
| MflI | RGATCY | 1 cut(s) | 175 |
| MhlI | GDGCHC | 3 cut(s) | 68, 111, 156 |
| MluCI | AATT | 1 cut(s) | 242 |
| MspR9I | CCNGG | 1 cut(s) | 81 |
| MvaI | CCWGG | 1 cut(s) | 81 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 106 |
| NdeII | GATC | 3 cut(s) | 43, 145, 175 |
| NlaIV | GGNNCC | 1 cut(s) | 67 |
| PshAI | GACNNNNGTC | 1 cut(s) | 137 |
| Psp124BI | GAGCTC | 1 cut(s) | 156 |
| Psp6I | CCWGG | 1 cut(s) | 79 |
| PspFI | CCCAGC | 1 cut(s) | 232 |
| PspGI | CCWGG | 1 cut(s) | 79 |
| PspN4I | GGNNCC | 1 cut(s) | 67 |
| PsuI | RGATCY | 1 cut(s) | 175 |
| SacI | GAGCTC | 1 cut(s) | 156 |
| Sau3AI | GATC | 3 cut(s) | 43, 145, 175 |
| ScrFI | CCNGG | 1 cut(s) | 81 |
| SduI | GDGCHC | 3 cut(s) | 68, 111, 156 |
| SetI | ASST | 6 cut(s) | 78, 116, 156, 195, 219, 238 |
| SfaNI | GCATC | 1 cut(s) | 44 |
| Sse9I | AATT | 1 cut(s) | 242 |
| SspMI | CTAG | 1 cut(s) | 185 |
| SstI | GAGCTC | 1 cut(s) | 156 |
| StyD4I | CCNGG | 1 cut(s) | 79 |
| TasI | AATT | 1 cut(s) | 242 |
| TspDTI | ATGAA | 2 cut(s) | 17, 276 |
| XapI | RAATTY | 1 cut(s) | 242 |
| XbaI | TCTAGA | 1 cut(s) | 184 |
| XmiI | GTMKAC | 1 cut(s) | 141 |
| XspI | CTAG | 1 cut(s) | 185 |