Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0005806

Physical Location & Seq

Genomic Coordinates Reverse (-)

38632770 .. 38636798

Gene Structure 4029 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0322900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1860 bp

ATGGCTACCCCACAAGCACAACATATATCACCTGCCGGGATTCAATTAACCACGGCTAGCGGGGATTCAGCAACTGGGATAGATAGTCAATCAGCGGACATTGGCATCGACATTTCGGCTGATTCGGCTCAACCTACCAGACCTTTGCCTTATCTACTAGAACATATAAATAGAGAACAATACCTTAAGACATGTGTTGCCCTCTATAAGTATGCACTAAAGGGCGATTGGGAAGCTGCGGAACGAATCTTGAAAAAGGATACGAAACTTCTGAGAGCAAGCATATCTAGAGGATGTGAAACAGTCCTTCACGTTGCAGCAGGAGCAAGACGTATTCATTTTGTGGAGAAACTGATCAGCATGATGAACGTAGAAGATTTGGCACTGCAGGACGTAAATGGAAACACTGCGTTGTGTATTGCCGCTGCGGCTGGATCTCTAGACATTGTCCAGATTTTGATACAAAAGAATAAGTCTTTACTATCGATTCGAGGCGGTAAAGATATGACACCAGCCTACATGGCTGTTGTGTTGGGACAGTCAGAAATGGCATGGCACCTGTACGCTGAAAGTAACACAATGTTGGAGAAAACAGACCGCGAAAACTTGTTTTTTTCTTGCATCAACAATTGTTTGTATGATTTGGCCTTACCGTTGCTAAATGATGATAGAACATTAGCGACTGCACGTACTAAATCGCAGAAATATAAAACAGCCTTGCATATATTGGCTAGAAGGCCTTCAGCATTTGGTGGCAGCCAATGTCCAGGAATGTGGAGTAGACTTATTAACTCATTCCTCCCAAGTTTGAAGTTTGCTTGCAAAAGAAAGTTAAAACAAGCTAATGAAGCCCTTCAACTAGTCCAACGTCTTTGGGAAGAAATTTTAAAAGATGAGCATGAAGAAGTGATGAGGCTGATCAAATATCCTTCAAATTTATTATTTGACGCAGCGGAATTAGGGAATTATGAGTTTCTGGCGGCACTTATGAGCTCTTATCCTGAGTTGGTATGGGAAACTGATGAAAAAAATCGAACCATTATCCATGTCGCAGTTCTGCATCGTCATGCAAGTATCTTTAATCTAGTGCATGAAATAGGCTCGATCAAAGATGTCATAGTGACATATGAGGATGATCAGGGTAACAACATTGTGCATATGGCTGCAAAATTAGCACCTCAAAATCAATTGAATCTCGTGTCAGGCGTAGCTCTTCAAATGCATCGAGAGTTGGTATGGTTTGAGGAAGTCAAAAAAATTGTTCAACCTCAGTATATAGAGATGGAAAACCAACAAGGCAAAACACCTCAAGAATTATTCACTAAGGAGCATAGGGCGCTCATGCGTCAAGGAGAATCATGGATGAAAGACACTGCAACTTCATGCTTACTCGTTGCAACTATTATTGCAACTGTTGTGTTTTCAGCTGCATTTAGCATACCAGGTGGCACAGATGATCATACCGGAAAGCCCAACTTCTTAAAAGAGAAAATGTTTCTATACTTTACCATAGCCGATGGACTAGCACTTTTTTCCTCTTCAACTGCAATGCTAATGTTCTTGTTCATCCTAACCTCGCGGTACGCAGAAAACGATTTTCTCAAATCCTTACCATTGAAGTTGATGATAGGACTCACTTCCCTATTCATCTCTATAGCATCCATGATGATGGCTTTCAGCACCGCCTTCTATTTGTCTTGTCAATATGAATCAAGATGGGTTTCAGATTTTACATTTTTATTTGCACTTGTCCCAGTTGCTTTGTTTGCGTTTATGCAATTCCCTCTCATGTCTGACATGTCCTCTTCTATATTTTGCTCAAGTTTGTTATTTCAGCCGTGGAAACACATGCTTTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006081 GO:0006082 GO:0006090 GO:0006629 GO:0006644 GO:0006720 GO:0006793 GO:0006796 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0008654 GO:0009058 GO:0009240 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009617 GO:0009627 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009862 GO:0009863 GO:0009941 GO:0009987 GO:0010033 GO:0014070 GO:0016491 GO:0016725 GO:0019288 GO:0019637 GO:0019682 GO:0019752 GO:0023052 GO:0031967 GO:0031975 GO:0032787 GO:0032870 GO:0035690 GO:0042221 GO:0042493 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046429 GO:0046490 GO:0046677 GO:0048037 GO:0050789 GO:0050794 GO:0050896 GO:0051536 GO:0051539 GO:0051540 GO:0051704 GO:0051707 GO:0051716 GO:0052592 GO:0055114 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0090407 GO:0098542 GO:1901135 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 map00900 map01100 map01110 map01130

Pfam Domains

Protein Families

GcpE

Protein Analysis

619

Amino Acids

69.54

Weight (kDa)

6.37

Isoelectric Point (pI)

44.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	72 - 157	5.3e-09	Ankyrin repeats (3 copies)
Ank_2	PF12796	103 - 190	1.3e-09	Ankyrin repeats (3 copies)
PGG	PF13962	453 - 565	2e-25	Domain of unknown function

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005806)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60600 AT5G60600 AT5G60600 AT5G60600 AT5G60600
fragaria_vesca	FvH4_3g32460 FvH4_3g32460 FvH4_3g32460
malus_domestica	MD03G1117300.v1.1 MD11G1135000.v1.1
prunus_persica	Prupe.6G101000_v2.0.a1 Prupe.6G101000_v2.0.a1 Prupe.6G101000_v2.0.a1 Prupe.6G101000_v2.0.a1 Prupe.6G101000_v2.0.a1
pyrus_communis	pycom11g11210
rosa_chinensis	RchiOBHm_Chr5g0059471
rosa_laevigata	RLG00000035288
rosa_multiflora	Rmu_sc0000375.1_g000001 Rmu_sc0001977.1_g000002
rosa_roxburghii	Rroxscaffold_1G00021070
rosa_rugosa	Rorug05G0322800 Rorug05G0322900 Rorug05G0322900
rosa_samantha	Rh5BG398900 Rh5DG413800
rosa_wichuraiana	Rw5G036470 Rw5G036510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	40
Acc36I	ACCTGC	1 cut(s)	40
AccB1I	GGYRCC	1 cut(s)	555
AccI	GTMKAC	1 cut(s)	781
AccII	CGCG	2 cut(s)	600, 1579
AclWI	GGATC	1 cut(s)	442
AcsI	RAATTY	2 cut(s)	882, 934
AcuI	CTGAAG	1 cut(s)	726
AfaI	GTAC	3 cut(s)	563, 691, 1583
AflII	CTTAAG	1 cut(s)	185
AflIII	ACRYGT	2 cut(s)	191, 1797
AhlI	ACTAGT	1 cut(s)	859
AjnI	CCWGG	2 cut(s)	766, 1441
AluBI	AGCT	5 cut(s)	236, 842, 993, 1211, 1427
AluI	AGCT	5 cut(s)	236, 842, 993, 1211, 1427
Alw21I	GWGCWC	1 cut(s)	995
AlwI	GGATC	1 cut(s)	442
AlwNI	CAGNNNCTG	1 cut(s)	74
AoxI	GGCC	2 cut(s)	645, 737
ApeKI	GCWGC	7 cut(s)	236, 317, 425, 756, 950, 1163, 1427
ApoI	RAATTY	2 cut(s)	882, 934
Asp700I	GAANNNNTTC	2 cut(s)	739, 852
AspLEI	GCGC	1 cut(s)	1339
AsuC2I	CCSGG	1 cut(s)	37
AsuHPI	GGTGA	1 cut(s)	21
AsuNHI	GCTAGC	1 cut(s)	56
BanI	GGYRCC	1 cut(s)	555
BanII	GRGCYC	1 cut(s)	995
BauI	CACGAG	1 cut(s)	1196
Bbv12I	GWGCWC	1 cut(s)	995
BbvI	GCAGC	7 cut(s)	223, 329, 412, 768, 962, 1150, 1414
BccI	CCATC	4 cut(s)	1276, 1511, 1663, 1710
BceAI	ACGGC	2 cut(s)	69, 1822
BciT130I	CCWGG	2 cut(s)	768, 1443
BciVI	GTATCC	1 cut(s)	253
BclI	TGATCA	4 cut(s)	354, 918, 1135, 1456
BcnI	CCSGG	1 cut(s)	37
BcuI	ACTAGT	1 cut(s)	859
BfaI	CTAG	9 cut(s)	57, 158, 288, 440, 732, 860, 1085, 1523, 1858
BfmI	CTRYAG	2 cut(s)	386, 1653
BfoI	RGCGCY	1 cut(s)	1340
BfrI	CTTAAG	1 cut(s)	185
BfuAI	ACCTGC	1 cut(s)	40
BfuI	GTATCC	1 cut(s)	253
BglI	GCCNNNNNGGC	2 cut(s)	428, 521
Bme1390I	CCNGG	3 cut(s)	37, 768, 1443
BmiI	GGNNCC	1 cut(s)	557
BmrFI	CCNGG	3 cut(s)	37, 768, 1443
BmrI	ACTGGG	2 cut(s)	84, 1748
BmsI	GCATC	5 cut(s)	114, 630, 1069, 1231, 1667
BmtI	GCTAGC	1 cut(s)	60
BmuI	ACTGGG	2 cut(s)	84, 1748
BpuEI	CTTGAG	2 cut(s)	1293, 1804
BpuMI	CCSGG	1 cut(s)	37
Bsa29I	ATCGAT	1 cut(s)	485
BsaAI	YACGTR	1 cut(s)	689
BsaJI	CCNNGG	2 cut(s)	51, 1838
BsaWI	WCCGGW	1 cut(s)	1463
Bse1I	ACTGG	2 cut(s)	79, 1754
Bse3DI	GCAATG	1 cut(s)	1554
BseBI	CCWGG	2 cut(s)	768, 1443
BseCI	ATCGAT	1 cut(s)	485
BseDI	CCNNGG	2 cut(s)	51, 1838
BseGI	GGATG	5 cut(s)	299, 1138, 1368, 1566, 1658
BseMI	GCAATG	1 cut(s)	1554
BseMII	CTCAG	3 cut(s)	263, 993, 1283
BseNI	ACTGG	2 cut(s)	79, 1754
BseXI	GCAGC	7 cut(s)	223, 329, 412, 768, 962, 1150, 1414
BsgI	GTGCAG	1 cut(s)	669
Bsh1236I	CGCG	2 cut(s)	600, 1579
BshFI	GGCC	2 cut(s)	647, 739
BshNI	GGYRCC	1 cut(s)	555
BshVI	ATCGAT	1 cut(s)	485
BsiHKAI	GWGCWC	1 cut(s)	995
BsiSI	CCGG	2 cut(s)	36, 1464
BslFI	GGGAC	2 cut(s)	549, 1736
BsmFI	GGGAC	2 cut(s)	549, 1736
BsnI	GGCC	2 cut(s)	647, 739
Bsp1286I	GDGCHC	1 cut(s)	995
Bsp143I	GATC	6 cut(s)	354, 434, 918, 1104, 1135, 1456
BspANI	GGCC	2 cut(s)	647, 739
BspCNI	CTCAG	3 cut(s)	264, 994, 1282
BspDI	ATCGAT	1 cut(s)	485
BspFNI	CGCG	2 cut(s)	600, 1579
BspLI	GGNNCC	1 cut(s)	557
BspMAI	CTGCAG	1 cut(s)	390
BspMI	ACCTGC	1 cut(s)	40
BspOI	GCTAGC	1 cut(s)	60
BspPI	GGATC	1 cut(s)	442
BspQI	GCTCTTC	1 cut(s)	1218
BspT107I	GGYRCC	1 cut(s)	555
BspTI	CTTAAG	1 cut(s)	185
BsrDI	GCAATG	1 cut(s)	1554
BsrI	ACTGG	2 cut(s)	79, 1754
BssECI	CCNNGG	2 cut(s)	51, 1838
BssMI	GATC	6 cut(s)	354, 434, 918, 1104, 1135, 1456
BssSI	CACGAG	1 cut(s)	1196
Bst2BI	CACGAG	1 cut(s)	1196
Bst2UI	CCWGG	2 cut(s)	768, 1443
Bst4CI	ACNGT	4 cut(s)	304, 540, 654, 1414
Bst6I	CTCTTC	3 cut(s)	1218, 1543, 1810
BstAFI	CTTAAG	1 cut(s)	185
BstBAI	YACGTR	1 cut(s)	689
BstC8I	GCNNGC	3 cut(s)	58, 280, 820
BstDEI	CTNAG	4 cut(s)	272, 1002, 1269, 1323
BstDSI	CCRYGG	2 cut(s)	51, 1838
BstF5I	GGATG	5 cut(s)	299, 1138, 1368, 1566, 1658
BstFNI	CGCG	2 cut(s)	600, 1579
BstH2I	RGCGCY	1 cut(s)	1340
BstHHI	GCGC	1 cut(s)	1339
BstKTI	GATC	6 cut(s)	357, 437, 921, 1107, 1138, 1459
BstMBI	GATC	6 cut(s)	354, 434, 918, 1104, 1135, 1456
BstMWI	GCNNNNNNNGC	8 cut(s)	125, 323, 428, 521, 848, 1172, 1336, 1766
BstNI	CCWGG	2 cut(s)	768, 1443
BstNSI	RCATGY	3 cut(s)	195, 1801, 1852
BstSCI	CCNGG	3 cut(s)	35, 766, 1441
BstSFI	CTRYAG	2 cut(s)	386, 1653
BstUI	CGCG	2 cut(s)	600, 1579
BstV1I	GCAGC	7 cut(s)	223, 329, 412, 768, 962, 1150, 1414
BstX2I	RGATCY	1 cut(s)	434
BstXI	CCANNNNNNTGG	2 cut(s)	774, 1669
BstYI	RGATCY	1 cut(s)	434
Bsu15I	ATCGAT	1 cut(s)	485
BsuI	GTATCC	1 cut(s)	253
BsuRI	GGCC	2 cut(s)	647, 739
BsuTUI	ATCGAT	1 cut(s)	485
BtgI	CCRYGG	2 cut(s)	51, 1838
BtsCI	GGATG	5 cut(s)	299, 1138, 1368, 1566, 1658
BtsI	GCAGTG	3 cut(s)	383, 405, 1371
BtsIMutI	CAGTG	3 cut(s)	383, 405, 1371
BveI	ACCTGC	1 cut(s)	40
Cac8I	GCNNGC	3 cut(s)	58, 280, 820
CaiI	CAGNNNCTG	1 cut(s)	74
CfoI	GCGC	1 cut(s)	1339
ClaI	ATCGAT	1 cut(s)	485
CseI	GACGC	2 cut(s)	956, 1334
CsiI	ACCWGGT	1 cut(s)	1441
Csp6I	GTAC	3 cut(s)	562, 690, 1582
CviQI	GTAC	3 cut(s)	562, 690, 1582
DdeI	CTNAG	4 cut(s)	272, 1002, 1269, 1323
DpnI	GATC	6 cut(s)	356, 436, 920, 1106, 1137, 1458
DpnII	GATC	6 cut(s)	354, 434, 918, 1104, 1135, 1456
DraI	TTTAAA	1 cut(s)	888
Eam1104I	CTCTTC	3 cut(s)	1218, 1543, 1810
EarI	CTCTTC	3 cut(s)	1218, 1543, 1810
Ecl136II	GAGCTC	1 cut(s)	993
Eco147I	AGGCCT	1 cut(s)	739
Eco24I	GRGCYC	1 cut(s)	995
Eco53kI	GAGCTC	1 cut(s)	993
Eco57I	CTGAAG	1 cut(s)	726
EcoICRI	GAGCTC	1 cut(s)	993
EcoRII	CCWGG	2 cut(s)	766, 1441
EcoT22I	ATGCAT	1 cut(s)	1224
EcoT38I	GRGCYC	1 cut(s)	995
FalI	AAGNNNNNCTT	2 cut(s)	1460, 1492
FaqI	GGGAC	2 cut(s)	549, 1736
FauI	CCCGC	1 cut(s)	53
FauNDI	CATATG	2 cut(s)	1126, 1158
FbaI	TGATCA	4 cut(s)	354, 918, 1135, 1456
FblI	GTMKAC	1 cut(s)	781
FokI	GGATG	5 cut(s)	306, 1145, 1375, 1553, 1645
FriOI	GRGCYC	1 cut(s)	995
FspBI	CTAG	9 cut(s)	57, 158, 288, 440, 732, 860, 1085, 1523, 1858
GlaI	GCGC	1 cut(s)	1338
HaeII	RGCGCY	1 cut(s)	1340
HaeIII	GGCC	2 cut(s)	647, 739
HapII	CCGG	2 cut(s)	36, 1464
HgaI	GACGC	2 cut(s)	956, 1334
HhaI	GCGC	1 cut(s)	1339
Hin6I	GCGC	1 cut(s)	1337
HinP1I	GCGC	1 cut(s)	1337
HinfI	GANTC	9 cut(s)	40, 65, 122, 246, 487, 1192, 1355, 1632, 1709
HpaII	CCGG	2 cut(s)	36, 1464
HphI	GGTGA	1 cut(s)	21
Hpy166II	GTNNAC	1 cut(s)	782
Hpy188I	TCNGA	4 cut(s)	273, 544, 1726, 1795
Hpy188III	TCNNGA	8 cut(s)	250, 288, 440, 451, 1001, 1226, 1310, 1713
Hpy8I	GTNNAC	1 cut(s)	782
HpyAV	CCTTC	6 cut(s)	317, 729, 750, 863, 939, 1696
HpyCH4III	ACNGT	4 cut(s)	304, 540, 654, 1414
HpyCH4IV	ACGT	6 cut(s)	312, 331, 369, 393, 688, 868
HpyF10VI	GCNNNNNNNGC	8 cut(s)	125, 323, 428, 521, 848, 1172, 1336, 1766
HpyF3I	CTNAG	4 cut(s)	272, 1002, 1269, 1323
HpySE526I	ACGT	6 cut(s)	312, 331, 369, 393, 688, 868
HspAI	GCGC	1 cut(s)	1337
Ksp22I	TGATCA	4 cut(s)	354, 918, 1135, 1456
Kzo9I	GATC	6 cut(s)	354, 434, 918, 1104, 1135, 1456
LguI	GCTCTTC	1 cut(s)	1218
LmnI	GCTCC	2 cut(s)	323, 1327
Lsp1109I	GCAGC	7 cut(s)	223, 329, 412, 768, 962, 1150, 1414
LweI	GCATC	5 cut(s)	114, 630, 1069, 1231, 1667
MabI	ACCWGGT	1 cut(s)	1441
MaeI	CTAG	9 cut(s)	57, 158, 288, 440, 732, 860, 1085, 1523, 1858
MaeII	ACGT	6 cut(s)	312, 331, 369, 393, 688, 868
MaeIII	GTNAC	3 cut(s)	572, 1120, 1142
MalI	GATC	6 cut(s)	356, 436, 920, 1106, 1137, 1458
MboI	GATC	6 cut(s)	354, 434, 918, 1104, 1135, 1456
MboII	GAAGA	6 cut(s)	386, 890, 914, 1205, 1530, 1797
MfeI	CAATTG	2 cut(s)	628, 1187
MflI	RGATCY	1 cut(s)	434
MhlI	GDGCHC	1 cut(s)	995
MlyI	GAGTC	1 cut(s)	1626
MmeI	TCCRAC	2 cut(s)	564, 889
Mph1103I	ATGCAT	1 cut(s)	1224
MroXI	GAANNNNTTC	2 cut(s)	739, 852
MseI	TTAA	7 cut(s)	47, 186, 789, 833, 887, 1080, 1481
MslI	CAYNNNNRTG	2 cut(s)	1065, 1667
MspA1I	CMGCKG	4 cut(s)	95, 425, 953, 1427
MspCI	CTTAAG	1 cut(s)	185
MspI	CCGG	2 cut(s)	36, 1464
MspR9I	CCNGG	3 cut(s)	37, 768, 1443
MunI	CAATTG	2 cut(s)	628, 1187
MvaI	CCWGG	2 cut(s)	768, 1443
MvnI	CGCG	2 cut(s)	600, 1579
MwoI	GCNNNNNNNGC	8 cut(s)	125, 323, 428, 521, 848, 1172, 1336, 1766
NciI	CCSGG	1 cut(s)	37
NdeI	CATATG	2 cut(s)	1126, 1158
NdeII	GATC	6 cut(s)	354, 434, 918, 1104, 1135, 1456
NheI	GCTAGC	1 cut(s)	56
NlaIV	GGNNCC	1 cut(s)	557
NmuCI	GTSAC	1 cut(s)	1120
NsiI	ATGCAT	1 cut(s)	1224
NspI	RCATGY	3 cut(s)	195, 1801, 1852
PaqCI	CACCTGC	1 cut(s)	40
PceI	AGGCCT	1 cut(s)	739
PciI	ACATGT	2 cut(s)	191, 1797
PciSI	GCTCTTC	1 cut(s)	1218
PcsI	WCGNNNNNNNCGW	2 cut(s)	1203, 1590
PdmI	GAANNNNTTC	2 cut(s)	739, 852
PfeI	GAWTC	8 cut(s)	40, 65, 122, 246, 487, 1192, 1355, 1709
PflFI	GACNNNGTC	1 cut(s)	446
PfoI	TCCNGGA	1 cut(s)	766
PleI	GAGTC	1 cut(s)	1626
PpsI	GAGTC	1 cut(s)	1626
Ppu21I	YACGTR	1 cut(s)	689
PscI	ACATGT	2 cut(s)	191, 1797
Psp124BI	GAGCTC	1 cut(s)	995
Psp6I	CCWGG	2 cut(s)	766, 1441
PspGI	CCWGG	2 cut(s)	766, 1441
PspN4I	GGNNCC	1 cut(s)	557
PstI	CTGCAG	1 cut(s)	390
PstNI	CAGNNNCTG	1 cut(s)	74
PsuI	RGATCY	1 cut(s)	434
PsyI	GACNNNGTC	1 cut(s)	446
PvuII	CAGCTG	1 cut(s)	1427
RsaI	GTAC	3 cut(s)	563, 691, 1583
RsaNI	GTAC	3 cut(s)	562, 690, 1582
RseI	CAYNNNNRTG	2 cut(s)	1065, 1667
SacI	GAGCTC	1 cut(s)	995
SapI	GCTCTTC	1 cut(s)	1218
SaqAI	TTAA	7 cut(s)	47, 186, 789, 833, 887, 1080, 1481
Sau3AI	GATC	6 cut(s)	354, 434, 918, 1104, 1135, 1456
SchI	GAGTC	1 cut(s)	1626
ScrFI	CCNGG	3 cut(s)	37, 768, 1443
SduI	GDGCHC	1 cut(s)	995
SexAI	ACCWGGT	1 cut(s)	1441
SfaNI	GCATC	5 cut(s)	114, 630, 1069, 1231, 1667
SfcI	CTRYAG	2 cut(s)	386, 1653
SmiMI	CAYNNNNRTG	2 cut(s)	1065, 1667
SmlI	CTYRAG	3 cut(s)	185, 1308, 1819
SmoI	CTYRAG	3 cut(s)	185, 1308, 1819
SpeI	ACTAGT	1 cut(s)	859
SseBI	AGGCCT	1 cut(s)	739
SspMI	CTAG	9 cut(s)	57, 158, 288, 440, 732, 860, 1085, 1523, 1858
SstI	GAGCTC	1 cut(s)	995
StuI	AGGCCT	1 cut(s)	739
StyD4I	CCNGG	3 cut(s)	35, 766, 1441
TaaI	ACNGT	4 cut(s)	304, 540, 654, 1414
TaiI	ACGT	6 cut(s)	315, 334, 372, 396, 691, 871
TaqI	TCGA	6 cut(s)	108, 485, 490, 1033, 1103, 1225
TauI	GCSGC	3 cut(s)	425, 431, 983
TfiI	GAWTC	8 cut(s)	40, 65, 122, 246, 487, 1192, 1355, 1709
Tru1I	TTAA	7 cut(s)	47, 186, 789, 833, 887, 1080, 1481
Tru9I	TTAA	7 cut(s)	47, 186, 789, 833, 887, 1080, 1481
TscAI	CASTG	3 cut(s)	390, 412, 1378
TseFI	GTSAC	1 cut(s)	1120
TseI	GCWGC	7 cut(s)	236, 317, 425, 756, 950, 1163, 1427
Tsp45I	GTSAC	1 cut(s)	1120
TspRI	CASTG	3 cut(s)	390, 412, 1378
Tth111I	GACNNNGTC	1 cut(s)	446
Vha464I	CTTAAG	1 cut(s)	185
XapI	RAATTY	2 cut(s)	882, 934
XbaI	TCTAGA	2 cut(s)	287, 439
XceI	RCATGY	3 cut(s)	195, 1801, 1852
XmiI	GTMKAC	1 cut(s)	781
XmnI	GAANNNNTTC	2 cut(s)	739, 852
XspI	CTAG	9 cut(s)	57, 158, 288, 440, 732, 860, 1085, 1523, 1858
Zsp2I	ATGCAT	1 cut(s)	1224

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.