Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0005806

Physical Location & Seq

Genomic Coordinates Reverse (-)

64734734 .. 64741689

Gene Structure 6956 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG398900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1953 bp

ATGGTTGGAAATGTGGCTATTGGCAGTGAGCATCCCATAAGGATTCAAACAATGACAACAAGTGACACAAAGGATGTATCTGCTACAGTTGAAGAGGTGATGAGAATAGCAGACAAGGGTGCAGATATTGTTCGGATAACAGTTCAAGGGAAGAAGGAAGCAGATGCTTGTTTCGAGATTAAAAATTCCCTGGTGCAGAAAAATTACAATATACCTCTGGTGGCAGATATTCATTTTGCTCCTTCTGTGGCATTGCGAGTTGCTGAATGCTTTGACAAAATTCGTGTCAACCCTGGAAATTTTGCTGATAGACGCGCACAGTTTGAGAAGTTAGAGTACACAGAAGACGACTATGAGAAAGAACTTGAGCACATTGAACAGGTTTTTACTCCATTAGTTGAAAAATGTAAGAAGTATGGAAGAGCAATGCGTATTGGCACAAACCATGGGAGCCTTTCAGATCGTATAATGAGCTATTATGGGGATTCACCTAGAGGAATGGTAGAATCTGCATTTGAGTTTGCGAGGATCTGCAGGAAGTTGGACTATCATAACTTTCTTTTCTCAATGAAAGCAAGCAATCCGGTTATCATGGTCCAAGCTTATCGCCTTCTTGTGGCTGAAATGTATGTTCAAGGCTGGGATTATCCATTACACTTGGGTGTCACTGAAGCTGGAGAAGGTGAGGATGGACGGATGAAATCTGCAATTGGTATTGGAACCCTTCTTCAGGATGGTTTGGGTGATACAATTAGGGTTTCACTTACTGAAGCACCTGAGGAGGAGATCGATCCCTGCAAAAGATTGGCTAACCTTGGTAAAAGAGCAGCTGATCTCCAGCAAGGAGTGGATCCTTTTGAAGAGAAACACCGACATTACTTTGATTTTCAGCGGCGAGCTGGTCAACTGCCAGTGCAAAAGGAGGGTGATGAGGTGGATTATAGAGGGGTCCTGCATCGTGATGGCTCAGTTCTGATGTCAGTCTCCCTTGATCAGTTGAAGACACCAGAGCTTCTGTACAAGTCACTTGCAGCAAAACTTGTCGTGGGCATGCCATTTAAGGATCTGGCAACAGTTGACTCGATATTATTGAGACAACTACCACCTGTTGACGACAATGATTCTCGTCTGGCTCTCAAAAGGTTGATAGATGTAAGTATGGGTGTTATAACGCCATTGTCAGAGCAGCTTACGAAATCATTGCCAAATGCCATGGTTCTGGTAAATTCAAAGGAATTATCGACTGGTGCATACAAGCTTTTGCCAGAAGGTACACGCTTGGTCGTCTCGGTCCGTGGTGATGAACCCTATGAAGTTCTGGATCTTCTCAAGGGCCTTGATGTTACAATGCTTCTCCATGACCTGCCATTCAGTGAAGAGAAAATAAGCCGAGTGCATGCAGCAAGGAGGCTTTTTGAGTATCTCGGAGACAATGGTCTAAACTTTCCTGTAATACACCATATTCAGTTTCCAAGTGGAATTCATAGGGATGACTTGGTTATTGGTGCTGGTACCAATGTGGGAGCCCTTTTAGTAGATGGGCTTGGAGATGGTCTCCTATTAGAAGCCCCTGACAAGGATTTCGATTTCATTAGAAACACATCTTTCAATTTACTACAAGGTTGTAGAATGCGGAACACAAAGACGGAGTATGTCTCATGCCCATCATGTGGAAGAACTTTGTTTGATCTGCAAGAAATAAGCGCACAAATACGAGAGAAGACATCACACTTGCCTGGTGTTTCAATTGCAATCATGGGTTGCATTGTAAATGGACCTGGGGAGATGGCAGATGCAGACTTCGGGTATGTTGGTGGTGCTCCTGGAAAGATTGATCTTTATGTTGGGAAGACTGTGGTGAAGCGTGGAATAGAGATGGAGCATGCAACTGATGCCTTGATCCAGCTAATAAAAGATCATGATCGCTGGGTTGACCCTCCAGCAGAAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006081 GO:0006082 GO:0006090 GO:0006629 GO:0006644 GO:0006720 GO:0006793 GO:0006796 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0008654 GO:0009058 GO:0009240 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009617 GO:0009627 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009862 GO:0009863 GO:0009941 GO:0009987 GO:0010033 GO:0014070 GO:0016491 GO:0016725 GO:0019288 GO:0019637 GO:0019682 GO:0019752 GO:0023052 GO:0031967 GO:0031975 GO:0032787 GO:0032870 GO:0035690 GO:0042221 GO:0042493 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046429 GO:0046490 GO:0046677 GO:0048037 GO:0050789 GO:0050794 GO:0050896 GO:0051536 GO:0051539 GO:0051540 GO:0051704 GO:0051707 GO:0051716 GO:0052592 GO:0055114 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0090407 GO:0098542 GO:1901135 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 map00900 map01100 map01110 map01130

Pfam Domains

Protein Families

GcpE

Protein Analysis

650

Amino Acids

72.25

Weight (kDa)

5.33

Isoelectric Point (pI)

34.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GcpE	PF04551	1 - 266	7.8e-87	GcpE TIM-barrel domain
GcpE_C	PF26540	550 - 638	2.8e-24	GcpE protein C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005806)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60600 AT5G60600 AT5G60600 AT5G60600 AT5G60600
fragaria_vesca	FvH4_3g32460 FvH4_3g32460 FvH4_3g32460
malus_domestica	MD03G1117300.v1.1 MD11G1135000.v1.1
prunus_persica	Prupe.6G101000_v2.0.a1 Prupe.6G101000_v2.0.a1 Prupe.6G101000_v2.0.a1 Prupe.6G101000_v2.0.a1 Prupe.6G101000_v2.0.a1
pyrus_communis	pycom11g11210
rosa_chinensis	RchiOBHm_Chr5g0059471
rosa_laevigata	RLG00000035288
rosa_multiflora	Rmu_sc0000375.1_g000001 Rmu_sc0001977.1_g000002
rosa_roxburghii	Rroxscaffold_1G00021070
rosa_rugosa	Rorug05G0322800 Rorug05G0322900 Rorug05G0322900
rosa_samantha	Rh5BG398900 Rh5DG413800
rosa_wichuraiana	Rw5G036470 Rw5G036510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1169
Acc36I	ACCTGC	1 cut(s)	1371
Acc65I	GGTACC	1 cut(s)	1511
AccB1I	GGYRCC	1 cut(s)	1511
AccB7I	CCANNNNNTGG	1 cut(s)	1670
AccII	CGCG	1 cut(s)	315
AciI	CCGC	2 cut(s)	892, 1633
AclWI	GGATC	7 cut(s)	536, 785, 845, 858, 1071, 1329, 1894
AcsI	RAATTY	5 cut(s)	184, 279, 298, 1225, 1479
AcuI	CTGAAG	3 cut(s)	690, 713, 789
AfaI	GTAC	4 cut(s)	338, 1019, 1273, 1513
AfiI	CCNNNNNNNGG	4 cut(s)	616, 730, 1576, 1670
AjnI	CCWGG	5 cut(s)	189, 292, 1735, 1777, 1822
AleI	CACNNNNGTG	1 cut(s)	660
AluBI	AGCT	9 cut(s)	474, 602, 674, 830, 899, 1012, 1189, 1258, 1906
AluI	AGCT	9 cut(s)	474, 602, 674, 830, 899, 1012, 1189, 1258, 1906
Alw21I	GWGCWC	2 cut(s)	372, 1822
Alw26I	GTCTC	6 cut(s)	988, 1087, 1291, 1422, 1559, 1660
AlwI	GGATC	7 cut(s)	536, 785, 845, 858, 1071, 1329, 1894
AoxI	GGCC	1 cut(s)	1333
ApeKI	GCWGC	4 cut(s)	827, 1031, 1186, 1400
ApoI	RAATTY	5 cut(s)	184, 279, 298, 1225, 1479
ArsI	GACNNNNNNTTYG	4 cut(s)	270, 302, 1565, 1597
Asp718I	GGTACC	1 cut(s)	1511
AspLEI	GCGC	2 cut(s)	317, 1706
AspS9I	GGNCC	5 cut(s)	595, 949, 1291, 1333, 1775
AsuHPI	GGTGA	7 cut(s)	109, 480, 695, 755, 938, 1310, 1870
AvaII	GGWCC	4 cut(s)	595, 949, 1291, 1775
AxyI	CCTNAGG	1 cut(s)	777
BaeI	ACNNNNGTAYC	2 cut(s)	1503, 1536
BamHI	GGATCC	1 cut(s)	850
BanI	GGYRCC	1 cut(s)	1511
BanII	GRGCYC	1 cut(s)	1528
BarI	GAAGNNNNNNTAC	2 cut(s)	320, 352
BbsI	GAAGAC	4 cut(s)	351, 1007, 1727, 1856
Bbv12I	GWGCWC	2 cut(s)	372, 1822
BbvI	GCAGC	4 cut(s)	839, 1043, 1198, 1412
BccI	CCATC	8 cut(s)	683, 728, 956, 1532, 1544, 1672, 1780, 1870
BcgI	CGANNNNNNTGC	2 cut(s)	1183, 1217
BciT130I	CCWGG	5 cut(s)	191, 294, 1737, 1779, 1824
BclI	TGATCA	1 cut(s)	991
BcoDI	GTCTC	6 cut(s)	988, 1087, 1291, 1422, 1559, 1660
BfaI	CTAG	1 cut(s)	492
BfmI	CTRYAG	2 cut(s)	84, 532
BfuAI	ACCTGC	1 cut(s)	1371
BisI	GCNGC	5 cut(s)	828, 893, 1032, 1187, 1401
BlsI	GCNGC	5 cut(s)	829, 894, 1033, 1188, 1402
Bme1390I	CCNGG	5 cut(s)	191, 294, 1737, 1779, 1824
Bme18I	GGWCC	4 cut(s)	595, 949, 1291, 1775
BmgT120I	GGNCC	5 cut(s)	595, 949, 1291, 1333, 1775
BmiI	GGNNCC	6 cut(s)	452, 721, 852, 950, 1513, 1525
BmrFI	CCNGG	5 cut(s)	191, 294, 1737, 1779, 1824
BmsI	GCATC	5 cut(s)	40, 154, 964, 1783, 1882
BoxI	GACNNNNGTC	1 cut(s)	1434
BpiI	GAAGAC	4 cut(s)	351, 1007, 1727, 1856
BplI	GAGNNNNNCTC	4 cut(s)	1539, 1571, 1640, 1672
BpmI	CTGGAG	3 cut(s)	696, 821, 1923
BpuEI	CTTGAG	2 cut(s)	386, 1313
Bsa29I	ATCGAT	1 cut(s)	789
BsaBI	GATNNNNATC	1 cut(s)	1920
BsaI	GGTCTC	1 cut(s)	1559
BsaJI	CCNNGG	7 cut(s)	189, 292, 445, 814, 1212, 1294, 1778
BsaWI	WCCGGW	1 cut(s)	583
Bsc4I	CCNNNNNNNGG	4 cut(s)	616, 730, 1576, 1670
Bse1I	ACTGG	2 cut(s)	911, 1249
Bse21I	CCTNAGG	1 cut(s)	777
Bse3DI	GCAATG	3 cut(s)	251, 432, 1199
Bse8I	GATNNNNATC	1 cut(s)	1920
BseBI	CCWGG	5 cut(s)	191, 294, 1737, 1779, 1824
BseCI	ATCGAT	1 cut(s)	789
BseDI	CCNNGG	7 cut(s)	189, 292, 445, 814, 1212, 1294, 1778
BseGI	GGATG	6 cut(s)	31, 79, 694, 702, 739, 1495
BseJI	GATNNNNATC	1 cut(s)	1920
BseLI	CCNNNNNNNGG	4 cut(s)	616, 730, 1576, 1670
BseMI	GCAATG	3 cut(s)	251, 432, 1199
BseMII	CTCAG	2 cut(s)	768, 981
BseNI	ACTGG	2 cut(s)	911, 1249
BseRI	GAGGAG	2 cut(s)	794, 797
BseXI	GCAGC	4 cut(s)	839, 1043, 1198, 1412
BseYI	CCCAGC	2 cut(s)	639, 1926
BsgI	GTGCAG	2 cut(s)	141, 215
Bsh1236I	CGCG	1 cut(s)	315
BshFI	GGCC	1 cut(s)	1335
BshNI	GGYRCC	1 cut(s)	1511
BshVI	ATCGAT	1 cut(s)	789
BsiHKAI	GWGCWC	2 cut(s)	372, 1822
BsiSI	CCGG	1 cut(s)	584
BslI	CCNNNNNNNGG	4 cut(s)	616, 730, 1576, 1670
BsmAI	GTCTC	6 cut(s)	988, 1087, 1291, 1422, 1559, 1660
BsmBI	CGTCTC	1 cut(s)	1291
BsmI	GAATGC	2 cut(s)	272, 1635
BsnI	GGCC	1 cut(s)	1335
Bso31I	GGTCTC	1 cut(s)	1559
Bsp1286I	GDGCHC	3 cut(s)	372, 1528, 1822
Bsp1407I	TGTACA	1 cut(s)	1017
Bsp19I	CCATGG	2 cut(s)	445, 1212
BspACI	CCGC	2 cut(s)	892, 1633
BspANI	GGCC	1 cut(s)	1335
BspCNI	CTCAG	2 cut(s)	769, 980
BspDI	ATCGAT	1 cut(s)	789
BspFNI	CGCG	1 cut(s)	315
BspHI	TCATGA	1 cut(s)	1918
BspLI	GGNNCC	6 cut(s)	452, 721, 852, 950, 1513, 1525
BspMAI	CTGCAG	1 cut(s)	536
BspMI	ACCTGC	1 cut(s)	1371
BspPI	GGATC	7 cut(s)	536, 785, 845, 858, 1071, 1329, 1894
BspQI	GCTCTTC	1 cut(s)	415
BspT107I	GGYRCC	1 cut(s)	1511
BspTNI	GGTCTC	1 cut(s)	1559
BsrDI	GCAATG	3 cut(s)	251, 432, 1199
BsrGI	TGTACA	1 cut(s)	1017
BsrI	ACTGG	2 cut(s)	911, 1249
BssECI	CCNNGG	7 cut(s)	189, 292, 445, 814, 1212, 1294, 1778
BssT1I	CCWWGG	3 cut(s)	445, 814, 1212
Bst2UI	CCWGG	5 cut(s)	191, 294, 1737, 1779, 1824
Bst4CI	ACNGT	5 cut(s)	88, 142, 321, 1075, 1855
Bst6I	CTCTTC	5 cut(s)	87, 415, 855, 1371, 1941
BstAPI	GCANNNNNTGC	1 cut(s)	1892
BstAUI	TGTACA	1 cut(s)	1017
BstC8I	GCNNGC	5 cut(s)	577, 897, 1052, 1398, 1884
BstDEI	CTNAG	2 cut(s)	777, 967
BstDSI	CCRYGG	3 cut(s)	445, 1212, 1294
BstENI	CCTNNNNNAGG	1 cut(s)	728
BstF5I	GGATG	6 cut(s)	31, 79, 694, 702, 739, 1495
BstFNI	CGCG	1 cut(s)	315
BstHHI	GCGC	2 cut(s)	317, 1706
BstMAI	GTCTC	6 cut(s)	988, 1087, 1291, 1422, 1559, 1660
BstMWI	GCNNNNNNNGC	1 cut(s)	1892
BstNI	CCWGG	5 cut(s)	191, 294, 1737, 1779, 1824
BstNSI	RCATGY	3 cut(s)	1054, 1400, 1886
BstPAI	GACNNNNGTC	1 cut(s)	1434
BstSCI	CCNGG	5 cut(s)	189, 292, 1735, 1777, 1822
BstSFI	CTRYAG	2 cut(s)	84, 532
BstUI	CGCG	1 cut(s)	315
BstV1I	GCAGC	4 cut(s)	839, 1043, 1198, 1412
BstV2I	GAAGAC	4 cut(s)	351, 1007, 1727, 1856
BstX2I	RGATCY	4 cut(s)	528, 850, 1063, 1321
BstXI	CCANNNNNNTGG	1 cut(s)	1219
BstYI	RGATCY	4 cut(s)	528, 850, 1063, 1321
Bsu15I	ATCGAT	1 cut(s)	789
Bsu36I	CCTNAGG	1 cut(s)	777
BsuRI	GGCC	1 cut(s)	1335
BsuTUI	ATCGAT	1 cut(s)	789
BtgI	CCRYGG	3 cut(s)	445, 1212, 1294
BtsCI	GGATG	6 cut(s)	31, 79, 694, 702, 739, 1495
BtsI	GCAGTG	1 cut(s)	31
BtsIMutI	CAGTG	4 cut(s)	31, 666, 918, 1378
BveI	ACCTGC	1 cut(s)	1371
Cac8I	GCNNGC	5 cut(s)	577, 897, 1052, 1398, 1884
CciI	TCATGA	1 cut(s)	1918
CfoI	GCGC	2 cut(s)	317, 1706
Cfr13I	GGNCC	5 cut(s)	595, 949, 1291, 1333, 1775
ClaI	ATCGAT	1 cut(s)	789
CpoI	CGGWCCG	1 cut(s)	1291
CseI	GACGC	1 cut(s)	321
Csp6I	GTAC	4 cut(s)	337, 1018, 1272, 1512
CspI	CGGWCCG	1 cut(s)	1291
CviQI	GTAC	4 cut(s)	337, 1018, 1272, 1512
DdeI	CTNAG	2 cut(s)	777, 967
Eam1104I	CTCTTC	5 cut(s)	87, 415, 855, 1371, 1941
EarI	CTCTTC	5 cut(s)	87, 415, 855, 1371, 1941
Eco130I	CCWWGG	3 cut(s)	445, 814, 1212
Eco24I	GRGCYC	1 cut(s)	1528
Eco31I	GGTCTC	1 cut(s)	1559
Eco47I	GGWCC	4 cut(s)	595, 949, 1291, 1775
Eco57I	CTGAAG	3 cut(s)	690, 713, 789
Eco81I	CCTNAGG	1 cut(s)	777
EcoNI	CCTNNNNNAGG	1 cut(s)	728
EcoO109I	RGGNCCY	2 cut(s)	949, 1333
EcoRI	GAATTC	1 cut(s)	1479
EcoRII	CCWGG	5 cut(s)	189, 292, 1735, 1777, 1822
EcoT14I	CCWWGG	3 cut(s)	445, 814, 1212
EcoT38I	GRGCYC	1 cut(s)	1528
ErhI	CCWWGG	3 cut(s)	445, 814, 1212
Esp3I	CGTCTC	1 cut(s)	1291
FbaI	TGATCA	1 cut(s)	991
Fnu4HI	GCNGC	5 cut(s)	828, 893, 1032, 1187, 1401
FokI	GGATG	6 cut(s)	18, 86, 701, 709, 746, 1502
FriOI	GRGCYC	1 cut(s)	1528
Fsp4HI	GCNGC	5 cut(s)	828, 893, 1032, 1187, 1401
FspBI	CTAG	1 cut(s)	492
GlaI	GCGC	2 cut(s)	316, 1705
GluI	GCNGC	5 cut(s)	828, 893, 1032, 1187, 1401
GsaI	CCCAGC	2 cut(s)	643, 1930
GsuI	CTGGAG	3 cut(s)	696, 821, 1923
HaeIII	GGCC	1 cut(s)	1335
HapII	CCGG	1 cut(s)	584
HgaI	GACGC	1 cut(s)	321
HhaI	GCGC	2 cut(s)	317, 1706
Hin6I	GCGC	2 cut(s)	315, 1704
HinP1I	GCGC	2 cut(s)	315, 1704
HincII	GTYRAC	5 cut(s)	289, 905, 1078, 1111, 1933
HindII	GTYRAC	5 cut(s)	289, 905, 1078, 1111, 1933
HindIII	AAGCTT	2 cut(s)	600, 1256
HinfI	GANTC	5 cut(s)	43, 485, 506, 1079, 1121
HpaII	CCGG	1 cut(s)	584
HphI	GGTGA	7 cut(s)	109, 480, 695, 755, 938, 1310, 1870
Hpy166II	GTNNAC	7 cut(s)	289, 339, 905, 1078, 1111, 1274, 1933
Hpy188I	TCNGA	5 cut(s)	135, 460, 975, 1183, 1427
Hpy188III	TCNNGA	5 cut(s)	175, 731, 959, 1319, 1919
Hpy8I	GTNNAC	7 cut(s)	289, 339, 905, 1078, 1111, 1274, 1933
HpyAV	CCTTC	6 cut(s)	148, 252, 620, 674, 734, 1262
HpyCH4III	ACNGT	5 cut(s)	88, 142, 321, 1075, 1855
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1892
HpyF3I	CTNAG	2 cut(s)	777, 967
HspAI	GCGC	2 cut(s)	315, 1704
KpnI	GGTACC	1 cut(s)	1515
Ksp22I	TGATCA	1 cut(s)	991
LguI	GCTCTTC	1 cut(s)	415
LmnI	GCTCC	5 cut(s)	244, 450, 1523, 1825, 1879
Lsp1109I	GCAGC	4 cut(s)	839, 1043, 1198, 1412
LweI	GCATC	5 cut(s)	40, 154, 964, 1783, 1882
MaeI	CTAG	1 cut(s)	492
MaeIII	GTNAC	4 cut(s)	62, 664, 1023, 1342
MfeI	CAATTG	2 cut(s)	708, 1746
MflI	RGATCY	4 cut(s)	528, 850, 1063, 1321
MhlI	GDGCHC	3 cut(s)	372, 1528, 1822
MlyI	GAGTC	1 cut(s)	1073
MmeI	TCCRAC	1 cut(s)	522
MseI	TTAA	2 cut(s)	180, 1059
MslI	CAYNNNNRTG	3 cut(s)	660, 960, 1488
MspA1I	CMGCKG	2 cut(s)	830, 892
MspI	CCGG	1 cut(s)	584
MspR9I	CCNGG	5 cut(s)	191, 294, 1737, 1779, 1824
MunI	CAATTG	2 cut(s)	708, 1746
Mva1269I	GAATGC	2 cut(s)	272, 1635
MvaI	CCWGG	5 cut(s)	191, 294, 1737, 1779, 1824
MvnI	CGCG	1 cut(s)	315
MwoI	GCNNNNNNNGC	1 cut(s)	1892
NcoI	CCATGG	2 cut(s)	445, 1212
NlaIV	GGNNCC	6 cut(s)	452, 721, 852, 950, 1513, 1525
NmeAIII	GCCGAG	1 cut(s)	1415
NmuCI	GTSAC	3 cut(s)	62, 664, 1023
NspI	RCATGY	3 cut(s)	1054, 1400, 1886
OliI	CACNNNNGTG	1 cut(s)	660
PaeI	GCATGC	3 cut(s)	1054, 1400, 1886
PagI	TCATGA	1 cut(s)	1918
PciSI	GCTCTTC	1 cut(s)	415
PctI	GAATGC	2 cut(s)	272, 1635
PfeI	GAWTC	4 cut(s)	43, 485, 506, 1121
PflMI	CCANNNNNTGG	1 cut(s)	1670
PfoI	TCCNGGA	1 cut(s)	1822
PkrI	GCNGC	5 cut(s)	829, 894, 1033, 1188, 1402
PleI	GAGTC	1 cut(s)	1073
PpsI	GAGTC	1 cut(s)	1073
PpuMI	RGGWCCY	1 cut(s)	949
PshAI	GACNNNNGTC	1 cut(s)	1434
PsiI	TTATAA	1 cut(s)	1169
Psp5II	RGGWCCY	1 cut(s)	949
Psp6I	CCWGG	5 cut(s)	189, 292, 1735, 1777, 1822
PspFI	CCCAGC	2 cut(s)	639, 1926
PspGI	CCWGG	5 cut(s)	189, 292, 1735, 1777, 1822
PspN4I	GGNNCC	6 cut(s)	452, 721, 852, 950, 1513, 1525
PspPI	GGNCC	5 cut(s)	595, 949, 1291, 1333, 1775
PspPPI	RGGWCCY	1 cut(s)	949
PstI	CTGCAG	1 cut(s)	536
PsuI	RGATCY	4 cut(s)	528, 850, 1063, 1321
PvuII	CAGCTG	1 cut(s)	830
RsaI	GTAC	4 cut(s)	338, 1019, 1273, 1513
RsaNI	GTAC	4 cut(s)	337, 1018, 1272, 1512
RseI	CAYNNNNRTG	3 cut(s)	660, 960, 1488
Rsr2I	CGGWCCG	1 cut(s)	1291
RsrII	CGGWCCG	1 cut(s)	1291
SapI	GCTCTTC	1 cut(s)	415
SaqAI	TTAA	2 cut(s)	180, 1059
SatI	GCNGC	5 cut(s)	828, 893, 1032, 1187, 1401
Sau96I	GGNCC	5 cut(s)	595, 949, 1291, 1333, 1775
SchI	GAGTC	1 cut(s)	1073
ScrFI	CCNGG	5 cut(s)	191, 294, 1737, 1779, 1824
SduI	GDGCHC	3 cut(s)	372, 1528, 1822
SfaNI	GCATC	5 cut(s)	40, 154, 964, 1783, 1882
SfcI	CTRYAG	2 cut(s)	84, 532
SinI	GGWCC	4 cut(s)	595, 949, 1291, 1775
SmiMI	CAYNNNNRTG	3 cut(s)	660, 960, 1488
SmlI	CTYRAG	2 cut(s)	365, 1328
SmoI	CTYRAG	2 cut(s)	365, 1328
SphI	GCATGC	3 cut(s)	1054, 1400, 1886
SsiI	CCGC	2 cut(s)	892, 1633
SspMI	CTAG	1 cut(s)	492
StyD4I	CCNGG	5 cut(s)	189, 292, 1735, 1777, 1822
StyI	CCWWGG	3 cut(s)	445, 814, 1212
TaaI	ACNGT	5 cut(s)	88, 142, 321, 1075, 1855
TaqI	TCGA	5 cut(s)	174, 789, 1082, 1241, 1584
TaqII	GACCGA	1 cut(s)	1279
TatI	WGTACW	2 cut(s)	336, 1017
TauI	GCSGC	1 cut(s)	895
TfiI	GAWTC	4 cut(s)	43, 485, 506, 1121
Tru1I	TTAA	2 cut(s)	180, 1059
Tru9I	TTAA	2 cut(s)	180, 1059
TscAI	CASTG	4 cut(s)	31, 673, 918, 1378
TseFI	GTSAC	3 cut(s)	62, 664, 1023
TseI	GCWGC	4 cut(s)	827, 1031, 1186, 1400
Tsp45I	GTSAC	3 cut(s)	62, 664, 1023
TspDTI	ATGAA	7 cut(s)	221, 584, 713, 1317, 1326, 1472, 1579
TspGWI	ACGGA	3 cut(s)	709, 1283, 1661
TspRI	CASTG	4 cut(s)	31, 673, 918, 1378
Van91I	CCANNNNNTGG	1 cut(s)	1670
VpaK11BI	GGWCC	4 cut(s)	595, 949, 1291, 1775
XagI	CCTNNNNNAGG	1 cut(s)	728
XapI	RAATTY	5 cut(s)	184, 279, 298, 1225, 1479
XceI	RCATGY	3 cut(s)	1054, 1400, 1886
XspI	CTAG	1 cut(s)	492

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.