Rorug05G0525500

peptidase inhibitor activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0015533
Physical Location & Seq
Reverse (-)
71321335 .. 71324010
2676 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0525500.1

Sequence Viewer

Length: 315 bp
ATGGGATCAGTCAGTCTTTCACTTTCTTTTGCGAGTTTTTATGCTGGACATGGTCACTCTCTGTTACCAGGTGCTGGAGATTTTGCTTGGGTCCACAGATTACTTGACTTGGCGGACATTTGGAACCTCGGCTGCATCTTCGGTTTTCGCACGATTTACACCTCTACAATGTGGCTGGATTCTTGGACTAAGAATGAGATGGACCTGGGTTTCTTGGTATATAAATATGCAGTGCGCTTTGGGTTGTCTTCAAAGAGCTTTTGTGACCTTATCACTGATATGGGTTCTCATGGGTGTACAGGGGTGGAATTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 ko04626 map04016 map04075 map04626
Pfam Domains
Protein Families
CAP

Protein Analysis

104

Amino Acids

11.51

Weight (kDa)

5.64

Isoelectric Point (pI)

21.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 74
AciI CCGC 1 cut(s) 113
AclWI GGATC 1 cut(s) 13
AfaI GTAC 1 cut(s) 298
AfiI CCNNNNNNNGG 1 cut(s) 74
AgsI TTSAA 1 cut(s) 252
AjnI CCWGG 2 cut(s) 67, 204
AluBI AGCT 1 cut(s) 258
AluI AGCT 1 cut(s) 258
AlwI GGATC 1 cut(s) 13
AlwNI CAGNNNCTG 1 cut(s) 74
ApeKI GCWGC 1 cut(s) 132
AspLEI GCGC 1 cut(s) 237
AspS9I GGNCC 2 cut(s) 91, 202
AvaII GGWCC 2 cut(s) 91, 202
BbsI GAAGAC 1 cut(s) 240
BbvI GCAGC 1 cut(s) 119
BccI CCATC 1 cut(s) 193
BciT130I CCWGG 2 cut(s) 69, 206
BisI GCNGC 1 cut(s) 133
BlsI GCNGC 1 cut(s) 134
Bme1390I CCNGG 2 cut(s) 69, 206
Bme18I GGWCC 2 cut(s) 91, 202
BmgT120I GGNCC 2 cut(s) 91, 202
BmiI GGNNCC 2 cut(s) 92, 125
BmrFI CCNGG 2 cut(s) 69, 206
BmsI GCATC 1 cut(s) 144
BpiI GAAGAC 1 cut(s) 240
BpmI CTGGAG 1 cut(s) 96
BsaJI CCNNGG 2 cut(s) 127, 205
Bsc4I CCNNNNNNNGG 1 cut(s) 74
BseBI CCWGG 2 cut(s) 69, 206
BseDI CCNNGG 2 cut(s) 127, 205
BseLI CCNNNNNNNGG 1 cut(s) 74
BseXI GCAGC 1 cut(s) 119
BslI CCNNNNNNNGG 1 cut(s) 74
Bsp1407I TGTACA 1 cut(s) 296
Bsp143I GATC 1 cut(s) 5
BspACI CCGC 1 cut(s) 113
BspLI GGNNCC 2 cut(s) 92, 125
BspPI GGATC 1 cut(s) 13
BsrGI TGTACA 1 cut(s) 296
BssECI CCNNGG 2 cut(s) 127, 205
BssMI GATC 1 cut(s) 5
Bst2UI CCWGG 2 cut(s) 69, 206
BstAUI TGTACA 1 cut(s) 296
BstDEI CTNAG 1 cut(s) 189
BstHHI GCGC 1 cut(s) 237
BstKTI GATC 1 cut(s) 8
BstMBI GATC 1 cut(s) 5
BstNI CCWGG 2 cut(s) 69, 206
BstSCI CCNGG 2 cut(s) 67, 204
BstV1I GCAGC 1 cut(s) 119
BstV2I GAAGAC 1 cut(s) 240
BtsI GCAGTG 1 cut(s) 237
BtsIMutI CAGTG 2 cut(s) 237, 273
CaiI CAGNNNCTG 1 cut(s) 74
CfoI GCGC 1 cut(s) 237
Cfr13I GGNCC 2 cut(s) 91, 202
CsiI ACCWGGT 1 cut(s) 67
Csp6I GTAC 1 cut(s) 297
CviAII CATG 2 cut(s) 50, 290
CviJI RGCY 3 cut(s) 132, 175, 258
CviKI_1 RGCY 3 cut(s) 132, 175, 258
CviQI GTAC 1 cut(s) 297
DdeI CTNAG 1 cut(s) 189
DpnI GATC 1 cut(s) 7
DpnII GATC 1 cut(s) 5
EciI GGCGGA 1 cut(s) 128
Eco47I GGWCC 2 cut(s) 91, 202
EcoRII CCWGG 2 cut(s) 67, 204
FaeI CATG 2 cut(s) 53, 293
FaiI YATR 8 cut(s) 42, 51, 220, 222, 228, 281, 291, 313
FatI CATG 2 cut(s) 49, 289
Fnu4HI GCNGC 1 cut(s) 133
Fsp4HI GCNGC 1 cut(s) 133
GlaI GCGC 1 cut(s) 236
GluI GCNGC 1 cut(s) 133
GsuI CTGGAG 1 cut(s) 96
HhaI GCGC 1 cut(s) 237
Hin1II CATG 2 cut(s) 53, 293
Hin6I GCGC 1 cut(s) 235
HinP1I GCGC 1 cut(s) 235
HinfI GANTC 1 cut(s) 179
Hpy166II GTNNAC 2 cut(s) 94, 297
Hpy8I GTNNAC 2 cut(s) 94, 297
HpyCH4V TGCA 2 cut(s) 135, 230
HpyF3I CTNAG 1 cut(s) 189
Hsp92II CATG 2 cut(s) 53, 293
HspAI GCGC 1 cut(s) 235
Kzo9I GATC 1 cut(s) 5
LpnPI CCDG 8 cut(s) 30, 54, 60, 81, 161, 191, 218, 285
Lsp1109I GCAGC 1 cut(s) 119
LweI GCATC 1 cut(s) 144
MabI ACCWGGT 1 cut(s) 67
MaeIII GTNAC 3 cut(s) 53, 63, 263
MalI GATC 1 cut(s) 7
MboI GATC 1 cut(s) 5
MboII GAAGA 2 cut(s) 130, 240
MluCI AATT 1 cut(s) 308
MnlI CCTC 2 cut(s) 137, 172
MslI CAYNNNNRTG 1 cut(s) 278
MspR9I CCNGG 2 cut(s) 69, 206
MvaI CCWGG 2 cut(s) 69, 206
NdeII GATC 1 cut(s) 5
NlaIII CATG 2 cut(s) 53, 293
NlaIV GGNNCC 2 cut(s) 92, 125
NmeAIII GCCGAG 1 cut(s) 108
NmuCI GTSAC 2 cut(s) 53, 263
PfeI GAWTC 1 cut(s) 179
PflFI GACNNNGTC 1 cut(s) 51
PflMI CCANNNNNTGG 1 cut(s) 74
PkrI GCNGC 1 cut(s) 134
Psp6I CCWGG 2 cut(s) 67, 204
PspGI CCWGG 2 cut(s) 67, 204
PspN4I GGNNCC 2 cut(s) 92, 125
PspPI GGNCC 2 cut(s) 91, 202
PstNI CAGNNNCTG 1 cut(s) 74
PsyI GACNNNGTC 1 cut(s) 51
RsaI GTAC 1 cut(s) 298
RsaNI GTAC 1 cut(s) 297
RseI CAYNNNNRTG 1 cut(s) 278
SatI GCNGC 1 cut(s) 133
Sau3AI GATC 1 cut(s) 5
Sau96I GGNCC 2 cut(s) 91, 202
ScrFI CCNGG 2 cut(s) 69, 206
SetI ASST 6 cut(s) 73, 129, 164, 207, 260, 270
SexAI ACCWGGT 1 cut(s) 67
SfaNI GCATC 1 cut(s) 144
SinI GGWCC 2 cut(s) 91, 202
SmiMI CAYNNNNRTG 1 cut(s) 278
Sse9I AATT 1 cut(s) 308
SsiI CCGC 1 cut(s) 113
StyD4I CCNGG 2 cut(s) 67, 204
TasI AATT 1 cut(s) 308
TatI WGTACW 1 cut(s) 296
TfiI GAWTC 1 cut(s) 179
TscAI CASTG 2 cut(s) 237, 280
TseFI GTSAC 2 cut(s) 53, 263
TseI GCWGC 1 cut(s) 132
Tsp45I GTSAC 2 cut(s) 53, 263
TspRI CASTG 2 cut(s) 237, 280
Tth111I GACNNNGTC 1 cut(s) 51
Van91I CCANNNNNTGG 1 cut(s) 74
VpaK11BI GGWCC 2 cut(s) 91, 202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.