Domain of unknown function (DUF2828)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000014942 |
| rosa_multiflora | Rmu_sc0001716.1_g000034 |
| rosa_roxburghii | Rroxscaffold_7G00211160 Rroxscaffold_7G00211170 Rroxscaffold_7G00211200 |
| rosa_rugosa | Rorug05G0549200 Rorug05G0549300 Rorug05G0549700 Rorug05G0549900 |
| rosa_samantha | Rh6AG065900 Rh6AG066200 Rh6AG066300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 225, 260 |
| AciI | CCGC | 3 cut(s) | 223, 225, 260 |
| AclWI | GGATC | 1 cut(s) | 193 |
| AcoI | YGGCCR | 1 cut(s) | 267 |
| AcuI | CTGAAG | 1 cut(s) | 278 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 227 |
| AgsI | TTSAA | 3 cut(s) | 94, 216, 308 |
| AjiI | CACGTC | 1 cut(s) | 181 |
| AluBI | AGCT | 2 cut(s) | 265, 311 |
| AluI | AGCT | 2 cut(s) | 265, 311 |
| AlwI | GGATC | 1 cut(s) | 193 |
| AoxI | GGCC | 2 cut(s) | 31, 267 |
| AspS9I | GGNCC | 2 cut(s) | 32, 53 |
| AsuHPI | GGTGA | 3 cut(s) | 52, 111, 159 |
| AvaII | GGWCC | 1 cut(s) | 53 |
| BccI | CCATC | 1 cut(s) | 130 |
| Bme18I | GGWCC | 1 cut(s) | 53 |
| BmgBI | CACGTC | 1 cut(s) | 181 |
| BmgT120I | GGNCC | 2 cut(s) | 32, 53 |
| BmiI | GGNNCC | 3 cut(s) | 54, 55, 241 |
| BsaJI | CCNNGG | 4 cut(s) | 28, 35, 223, 270 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 219, 249 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 227 |
| Bse3DI | GCAATG | 1 cut(s) | 108 |
| BseDI | CCNNGG | 4 cut(s) | 28, 35, 223, 270 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 227 |
| BseMI | GCAATG | 1 cut(s) | 108 |
| BseMII | CTCAG | 1 cut(s) | 315 |
| Bsh1236I | CGCG | 2 cut(s) | 225, 260 |
| BshFI | GGCC | 2 cut(s) | 33, 269 |
| BslFI | GGGAC | 2 cut(s) | 39, 273 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 227 |
| BsmFI | GGGAC | 2 cut(s) | 39, 273 |
| BsmI | GAATGC | 1 cut(s) | 100 |
| BsnI | GGCC | 2 cut(s) | 33, 269 |
| Bsp143I | GATC | 1 cut(s) | 185 |
| BspACI | CCGC | 3 cut(s) | 223, 225, 260 |
| BspANI | GGCC | 2 cut(s) | 33, 269 |
| BspCNI | CTCAG | 1 cut(s) | 314 |
| BspFNI | CGCG | 2 cut(s) | 225, 260 |
| BspLI | GGNNCC | 3 cut(s) | 54, 55, 241 |
| BspPI | GGATC | 1 cut(s) | 193 |
| BsrDI | GCAATG | 1 cut(s) | 108 |
| BssECI | CCNNGG | 4 cut(s) | 28, 35, 223, 270 |
| BssMI | GATC | 1 cut(s) | 185 |
| BssT1I | CCWWGG | 2 cut(s) | 28, 35 |
| BstC8I | GCNNGC | 1 cut(s) | 267 |
| BstDEI | CTNAG | 2 cut(s) | 301, 312 |
| BstDSI | CCRYGG | 1 cut(s) | 223 |
| BstFNI | CGCG | 2 cut(s) | 225, 260 |
| BstKTI | GATC | 1 cut(s) | 188 |
| BstMBI | GATC | 1 cut(s) | 185 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 266 |
| BstUI | CGCG | 2 cut(s) | 225, 260 |
| BsuRI | GGCC | 2 cut(s) | 33, 269 |
| BtgI | CCRYGG | 1 cut(s) | 223 |
| BtrI | CACGTC | 1 cut(s) | 181 |
| Cac8I | GCNNGC | 1 cut(s) | 267 |
| Cfr13I | GGNCC | 2 cut(s) | 32, 53 |
| Cfr42I | CCGCGG | 1 cut(s) | 226 |
| CviJI | RGCY | 7 cut(s) | 5, 33, 240, 265, 269, 275, 311 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 33, 240, 265, 269, 275, 311 |
| DdeI | CTNAG | 2 cut(s) | 301, 312 |
| DpnI | GATC | 1 cut(s) | 187 |
| DpnII | GATC | 1 cut(s) | 185 |
| EaeI | YGGCCR | 1 cut(s) | 267 |
| Eco130I | CCWWGG | 2 cut(s) | 28, 35 |
| Eco47I | GGWCC | 1 cut(s) | 53 |
| Eco57I | CTGAAG | 1 cut(s) | 278 |
| EcoO109I | RGGNCCY | 1 cut(s) | 53 |
| EcoT14I | CCWWGG | 2 cut(s) | 28, 35 |
| ErhI | CCWWGG | 2 cut(s) | 28, 35 |
| FaiI | YATR | 1 cut(s) | 68 |
| FaqI | GGGAC | 2 cut(s) | 39, 273 |
| FauI | CCCGC | 1 cut(s) | 230 |
| HaeIII | GGCC | 2 cut(s) | 33, 269 |
| HinfI | GANTC | 1 cut(s) | 299 |
| HphI | GGTGA | 3 cut(s) | 52, 111, 159 |
| Hpy188I | TCNGA | 1 cut(s) | 185 |
| Hpy188III | TCNNGA | 2 cut(s) | 94, 296 |
| Hpy99I | CGWCG | 1 cut(s) | 185 |
| HpyAV | CCTTC | 1 cut(s) | 302 |
| HpyCH4IV | ACGT | 1 cut(s) | 180 |
| HpyCH4V | TGCA | 4 cut(s) | 48, 128, 143, 198 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 266 |
| HpyF3I | CTNAG | 2 cut(s) | 301, 312 |
| HpySE526I | ACGT | 1 cut(s) | 180 |
| KflI | GGGWCCC | 1 cut(s) | 53 |
| KspI | CCGCGG | 1 cut(s) | 226 |
| Kzo9I | GATC | 1 cut(s) | 185 |
| LmnI | GCTCC | 2 cut(s) | 245, 262 |
| LpnPI | CCDG | 4 cut(s) | 84, 193, 251, 281 |
| MaeII | ACGT | 1 cut(s) | 180 |
| MalI | GATC | 1 cut(s) | 187 |
| MboI | GATC | 1 cut(s) | 185 |
| MboII | GAAGA | 2 cut(s) | 98, 163 |
| MluCI | AATT | 1 cut(s) | 216 |
| MlyI | GAGTC | 1 cut(s) | 293 |
| MmeI | TCCRAC | 3 cut(s) | 163, 267, 276 |
| MnlI | CCTC | 4 cut(s) | 144, 221, 257, 265 |
| MspA1I | CMGCKG | 1 cut(s) | 225 |
| Mva1269I | GAATGC | 1 cut(s) | 100 |
| MvnI | CGCG | 2 cut(s) | 225, 260 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 266 |
| NdeII | GATC | 1 cut(s) | 185 |
| NlaIV | GGNNCC | 3 cut(s) | 54, 55, 241 |
| NmeAIII | GCCGAG | 1 cut(s) | 295 |
| PctI | GAATGC | 1 cut(s) | 100 |
| PleI | GAGTC | 1 cut(s) | 293 |
| PpsI | GAGTC | 1 cut(s) | 293 |
| PpuMI | RGGWCCY | 1 cut(s) | 53 |
| Psp5II | RGGWCCY | 1 cut(s) | 53 |
| PspN4I | GGNNCC | 3 cut(s) | 54, 55, 241 |
| PspPI | GGNCC | 2 cut(s) | 32, 53 |
| PspPPI | RGGWCCY | 1 cut(s) | 53 |
| SacII | CCGCGG | 1 cut(s) | 226 |
| Sau3AI | GATC | 1 cut(s) | 185 |
| Sau96I | GGNCC | 2 cut(s) | 32, 53 |
| SchI | GAGTC | 1 cut(s) | 293 |
| SetI | ASST | 9 cut(s) | 15, 63, 136, 149, 183, 232, 249, 267, 313 |
| Sfr303I | CCGCGG | 1 cut(s) | 226 |
| SgrBI | CCGCGG | 1 cut(s) | 226 |
| SinI | GGWCC | 1 cut(s) | 53 |
| Sse9I | AATT | 1 cut(s) | 216 |
| SsiI | CCGC | 3 cut(s) | 223, 225, 260 |
| StyI | CCWWGG | 2 cut(s) | 28, 35 |
| TaiI | ACGT | 1 cut(s) | 183 |
| TasI | AATT | 1 cut(s) | 216 |
| TspGWI | ACGGA | 1 cut(s) | 182 |
| VpaK11BI | GGWCC | 1 cut(s) | 53 |