Rorug06G0105400

receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0017774
Physical Location & Seq
Forward (+)
14161299 .. 14166138
4840 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0105400.1

Sequence Viewer

Length: 3243 bp
ATGAATCTGAGCAAACCTCAATTCGGAGCCTCTTCCTCTTCCTCTTCCTCCTCGTCTTCTTCTTCCACCCATTTGTTCACACACGATGTCTTTCTGAGCTTCAGAGGTGCGGATACGCGTAACAATTTTACAGGCCATTTGTACCGCAATTTGGTTCAAGAGGGAATTAACACCTTCATCGATAATGAGCTTACAAGAGGAGAAGATATAACAAAGGAGCTTCTCGAAGTAATTGAAGGATCAAGGATTTCCATTGTTGTATTTTCTGCCAACTATGCATCTTCAAAGTGGTGCTTGGATGAACTTGTCAAGATCTTTCAATGCAAAGAATCCAAGCAACAAATGGTTTACCCAATTTTCTACAAGGTAGATCCGTCGGAGATACGATACCAGAAGGGCCAGGTTGGTGAGGCAATTGCTCGCCTTAGCAAACACAAGGATAACTTAGAGAAGGTGGAGAGTTGGAAGGCAGCTCTTAGAAAAGCAGCAACTTTGTCTGGGTGGCCCATCTCGGATGGAGGGCATGAAGCAAATGTCGTTGATGAAATTGTTAAAGAGATATCATCAACCAAAATAATGAAATGCATCCCTTTAAATGTGGCAACATATCCTGTTGGAATTAAATCTCGTGTAGAAGACATACTTGAGTACTTAAAGGTGGGGCAAGACAATCCTCACATGGTAGGGATATGGGGAATTGGCGGAATAGGAAAGTCAACACTTGCAAAAGCTGTATACAATTTAATTAGCCATGAGTTTGAACATAGCTGTTTCTTGAGTATTGTTAGCGGAGCATCATTTTCAGATGGAGGTCTTGTCCAGCTACAAAACAATTTCCTTTCTAAGATTATAGAGAGGAATCCACCTAACGTGAACGATGTTGATGAAGGAATCACTAAGCTGAAGCAAAAACTAAGCCAAAAAAGGGTTCTCTTAGTTCTTGATAATGTGAACCACTTGGATAAGTTAAAAGCACTTGCTGGAGGGTGTGATTGGTTTGGTCCAAGAAGTAGAATTATCATAACAACAAGAGATAAAAAGTGCTTAAGGGCTCATACAGTCAATACAATATATGAGGTCAAAGAATTAAATGATGAAGAAGCGTTAAAGCTCTTCAATTTCAATGCTTTCAAAGGAAGTATATGTACGGATGACTTCTTTGAACTTGCAACTGAGGTAATACATTATGCTAAAGGGATTCCGTTAGTTTTGGAAGTTTTGGGGTCAGATCTATGTCGTAAAGATAAGGATGAGTGGAAAGATGCATTAGAGTATTACATGAGATATCCTGACCAAGATATTCAAAGAACTCTCCAAAGAAGTTACGATGGATTGGATGATCAGATACAACAAGTTTTTCTTCATATTGCATGTTTCTTTAAAGGTGACAAACAAAGTTATGTGCTAAATGCACTACAAAGCCGTGACTTGAAACCCAGGCATGCTCTCGACGTCCTCAAAGAGAAGGCCTTGATCAAAATTGAGAAAGACAATAGCATTTGGATGCATGACCTTATAGAAAGCATGGGAAAAGAAATTGTTCGACAAGAGTCCCCTGATGAGAAAGGACGACGTAGTAGACTGTGGCTATATGAGGATGTTCGCGAAGTCCTTGAGGAAAATGAAGGAACGGATAAAATTAAAGGCATCGTGGTAAGACAAAGAAGTTGGTCATCACGAACGATATGGTTGAACAGCGGAAGCTTCACAAACTTGAAAAATCTGCAAATTTTTATAGTCGATAATTATGTGCTTCATGGAGAGAGCGTGGATTATCTCCCCAACAAGTTGAGGGTCTTTGACTGGATGGATTGTTCATTACGATCGTCGCCAACGAATTTTAATCCAAGGGAACTCGTTATGCTGCACGTTCGTGGGCCCTGCACGACTCCACTAGTGGACGAGGGATTCAGGAATATGCGATATTTGAAATCTATCCAATTGGGGGACCTTGATGGTCTAACAAGAATTCCCGACTTGTCTGGATTAACAAGCTTACAGTATTTGGAGCTATTTAATTGTGATGATTTAGTTGAAGTTCATCCTTCGGTTGGCCGTCTCGATAAGCTCGTCGTTTTGAAACTCACCCATTGTTACAAGCTCCAGATGTTTCAAGAGAGGATCAACTTGAAATCTTTGGAAACTCTGGAACTATCTTATGGCCCGCTTAAGTTCTTCCCTGAAATTGAGGGAGACATGAAGTCTTTGAATCGCCTGGATCTAACTGGCACTGCCATCAAAGAGTTACCTTGCTCAGTTGGAAATCTCACCGGCCTAAAATTCTTGTCTCTATCTAGCTGTGATAATCTTACAAATGTACCATCAAGCATTTTCTATGGATTGCAACGTCTGGAGGATCTTGATCTACGGGAATGCTATAAGCTTGTTACATTTCCAACAAAGTCAGAATCACTTCCTCCTCCACCGGTCTTTTCAACTAACCTCACTTCCAGATTACAAGTTCATCTAGACTACTGCAACCGGCTTGAAGAAATTTCAGAATTTCCACGAGAAATACATGGCTTATCTGTGGAAGGTTGTGGGTCATTGGAAAGAATTTCAAAGTTGTCAAAAATTTTGGAGGGTAAAGATTCAAAAATGTTCGGTCGGTTGAACTTGACCAACTGCGAGAGACTCTGCGACAATCTGGCTCGTGGAGTTGAAGTTGACAAGCGACTATTTCATGTGGCCAAGAAGAGAAAGAAGATGACACCATCACCGTTTGCGGGAACCAAAGAATTGATGGGAGAGGCAGACAAATTGACGTCTCTGTTGACTCTTTTTTTCGCTTGTGCGAGATCTGAAGAATTCCAAGTAGAATTTCCTGCACGTGTTCCGATTCCAAACTGGTTCACCTGCCGTCAGGATGTGAATTGGGATGTGAATGGTAAAGTGATAAATAAAGAGCACGAGTTTTGCTTTGAAATTCCTCAAAACTCCAATTGGGACAACAAAGGGTTGGCTCTCTGTATTCAATCGTGTTTTTTTGAGGTCACTCATTTTGTTTACATCAATGGAATAAAGTTTGATGAGAAATTCATGTGGAACGACGAAGTGTGGGTGCATTATATTCCATTGGTTACAGTAATAAGGAGGTTCAGTGAGTGTGGGATGCCGCCACCACCTGATATGTTTCGAGTTATGTTTCGTCTTGAAGAAAGTTCTCATGTTGTAAGAAAAACACCTTTGGGGGGAAGTTGGGGAGTCCACTTGATCGAAGATTTGGAAGGAGAAGGCCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

1080

Amino Acids

123.27

Weight (kDa)

6.23

Isoelectric Point (pI)

39.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 28 - 191 3.9e-54 TIR domain
TIR_2 PF13676 30 - 125 3.6e-14 TIR domain
NB-ARC PF00931 209 - 379 1.5e-19 NB-ARC domain
WHD_ROQ1 PF23282 450 - 518 3e-17 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 679 - 791 1.1e-09 Leucine-rich repeat region
LRR_13 PF23286 710 - 779 1.1e-08 Disease resistance protein RPS4B-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2864
AatII GACGTC 2 cut(s) 1455, 2768
Acc36I ACCTGC 1 cut(s) 2864
AccI GTMKAC 2 cut(s) 735, 1579
AccII CGCG 2 cut(s) 118, 1605
AciI CCGC 8 cut(s) 110, 145, 702, 789, 1698, 2165, 2726, 3116
AclWI GGATC 5 cut(s) 247, 365, 2129, 2226, 2364
AcoI YGGCCR 2 cut(s) 2053, 2688
AcuI CTGAAG 3 cut(s) 85, 923, 2823
AcvI CACGTG 1 cut(s) 2831
AcyI GRCGYC 2 cut(s) 1452, 2765
AfaI GTAC 4 cut(s) 143, 650, 1147, 2319
AfiI CCNNNNNNNGG 7 cut(s) 23, 151, 925, 1945, 2051, 2726, 3191
AflII CTTAAG 2 cut(s) 1045, 2168
AflIII ACRYGT 2 cut(s) 116, 2830
AgeI ACCGGT 1 cut(s) 2425
AhdI GACNNNNNGTC 1 cut(s) 2200
AhlI ACTAGT 1 cut(s) 1894
AjnI CCWGG 3 cut(s) 399, 1436, 2214
AjuI GAANNNNNNNTTGG 4 cut(s) 912, 944, 2805, 2837
AleI CACNNNNGTG 1 cut(s) 1872
AloI GAACNNNNNNTCC 2 cut(s) 1798, 1830
Alw21I GWGCWC 1 cut(s) 2910
Alw26I GTCTC 5 cut(s) 2063, 2187, 2292, 2626, 2772
AlwI GGATC 5 cut(s) 247, 365, 2129, 2226, 2364
ApaI GGGCCC 1 cut(s) 1881
ApeKI GCWGC 3 cut(s) 470, 485, 1864
AsiGI ACCGGT 1 cut(s) 2425
Asp700I GAANNNNTTC 2 cut(s) 1539, 2412
AspS9I GGNCC 7 cut(s) 397, 504, 1001, 1877, 1878, 1948, 2162
AsuHPI GGTGA 6 cut(s) 419, 1397, 2077, 2260, 2709, 2845
AvaII GGWCC 2 cut(s) 1001, 1948
BaeGI GKGCMC 1 cut(s) 1881
BaeI ACNNNNGTAYC 2 cut(s) 2301, 2334
BalI TGGCCA 1 cut(s) 2690
BanII GRGCYC 2 cut(s) 1054, 1881
BarI GAAGNNNNNNTAC 2 cut(s) 1129, 1161
BauI CACGAG 4 cut(s) 627, 2508, 2652, 2909
BbrPI CACGTG 1 cut(s) 2831
BbsI GAAGAC 2 cut(s) 48, 642
Bbv12I GWGCWC 1 cut(s) 2910
BbvI GCAGC 3 cut(s) 482, 497, 1851
BceAI ACGGC 3 cut(s) 1407, 2040, 2844
BciT130I CCWGG 3 cut(s) 401, 1438, 2216
BciVI GTATCC 1 cut(s) 106
BclI TGATCA 2 cut(s) 1339, 1473
BcoDI GTCTC 5 cut(s) 2063, 2187, 2292, 2626, 2772
BcuI ACTAGT 1 cut(s) 1894
BfaI CTAG 3 cut(s) 1895, 2295, 2468
BfrI CTTAAG 2 cut(s) 1045, 2168
BfuAI ACCTGC 1 cut(s) 2864
BfuI GTATCC 1 cut(s) 106
BglII AGATCT 3 cut(s) 312, 1228, 2798
BisI GCNGC 4 cut(s) 471, 486, 1865, 3116
BlsI GCNGC 4 cut(s) 472, 487, 1866, 3117
BmcAI AGTACT 1 cut(s) 650
Bme1390I CCNGG 3 cut(s) 401, 1438, 2216
Bme18I GGWCC 2 cut(s) 1001, 1948
BmeRI GACNNNNNGTC 1 cut(s) 2200
BmgT120I GGNCC 7 cut(s) 397, 504, 1001, 1877, 1878, 1948, 2162
BmiI GGNNCC 4 cut(s) 28, 1879, 1949, 2731
BmrFI CCNGG 3 cut(s) 401, 1438, 2216
BmsI GCATC 7 cut(s) 287, 594, 803, 1252, 1494, 1656, 3102
BoxI GACNNNNGTC 1 cut(s) 1549
BpiI GAAGAC 2 cut(s) 48, 642
BplI GAGNNNNNCTC 1 cut(s) 33
BpmI CTGGAG 3 cut(s) 1002, 2087, 2372
Bpu10I CCTNAGC 1 cut(s) 425
BpuEI CTTGAG 3 cut(s) 665, 796, 1634
Bsa29I ATCGAT 1 cut(s) 180
BsaAI YACGTR 1 cut(s) 2831
BsaBI GATNNNNATC 1 cut(s) 2361
BsaHI GRCGYC 2 cut(s) 1452, 2765
BsaJI CCNNGG 2 cut(s) 1436, 1847
BsaWI WCCGGW 1 cut(s) 2425
BsaXI ACNNNNNCTCC 8 cut(s) 801, 831, 1752, 1782, 2649, 2679, 3085, 3115
Bsc4I CCNNNNNNNGG 7 cut(s) 23, 151, 925, 1945, 2051, 2726, 3191
Bse118I RCCGGY 3 cut(s) 2270, 2425, 2481
Bse1I ACTGG 3 cut(s) 1808, 2230, 2852
Bse8I GATNNNNATC 1 cut(s) 2361
BseBI CCWGG 3 cut(s) 401, 1438, 2216
BseCI ATCGAT 1 cut(s) 180
BseDI CCNNGG 2 cut(s) 1436, 1847
BseJI GATNNNNATC 1 cut(s) 2361
BseLI CCNNNNNNNGG 7 cut(s) 23, 151, 925, 1945, 2051, 2726, 3191
BseMII CTCAG 3 cut(s) 86, 1164, 2268
BseNI ACTGG 3 cut(s) 1808, 2230, 2852
BseRI GAGGAG 3 cut(s) 40, 213, 2409
BseSI GKGCMC 1 cut(s) 1881
BseXI GCAGC 3 cut(s) 482, 497, 1851
BsgI GTGCAG 3 cut(s) 1850, 1867, 2811
Bsh1236I CGCG 2 cut(s) 118, 1605
Bsh1285I CGRYCG 2 cut(s) 1826, 2608
BshTI ACCGGT 1 cut(s) 2425
BshVI ATCGAT 1 cut(s) 180
BsiEI CGRYCG 2 cut(s) 1826, 2608
BsiHKAI GWGCWC 1 cut(s) 2910
BsiSI CCGG 3 cut(s) 2271, 2426, 2482
BslFI GGGAC 3 cut(s) 1537, 1961, 2960
BslI CCNNNNNNNGG 7 cut(s) 23, 151, 925, 1945, 2051, 2726, 3191
BsmAI GTCTC 5 cut(s) 2063, 2187, 2292, 2626, 2772
BsmBI CGTCTC 2 cut(s) 2063, 2772
BsmFI GGGAC 3 cut(s) 1537, 1961, 2960
BsmI GAATGC 1 cut(s) 2378
Bsp120I GGGCCC 1 cut(s) 1877
Bsp1286I GDGCHC 3 cut(s) 1054, 1881, 2910
Bsp68I TCGCGA 1 cut(s) 1605
BspACI CCGC 8 cut(s) 110, 145, 702, 789, 1698, 2165, 2726, 3116
BspCNI CTCAG 3 cut(s) 87, 1165, 2267
BspDI ATCGAT 1 cut(s) 180
BspFNI CGCG 2 cut(s) 118, 1605
BspLI GGNNCC 4 cut(s) 28, 1879, 1949, 2731
BspMI ACCTGC 1 cut(s) 2864
BspPI GGATC 5 cut(s) 247, 365, 2129, 2226, 2364
BspQI GCTCTTC 1 cut(s) 1118
BspTI CTTAAG 2 cut(s) 1045, 2168
BsrFI RCCGGY 3 cut(s) 2270, 2425, 2481
BsrI ACTGG 3 cut(s) 1808, 2230, 2852
BssAI RCCGGY 3 cut(s) 2270, 2425, 2481
BssECI CCNNGG 2 cut(s) 1436, 1847
BssNAI GTATAC 1 cut(s) 736
BssNI GRCGYC 2 cut(s) 1452, 2765
BssSI CACGAG 4 cut(s) 627, 2508, 2652, 2909
BssT1I CCWWGG 1 cut(s) 1847
Bst1107I GTATAC 1 cut(s) 736
Bst2BI CACGAG 4 cut(s) 627, 2508, 2652, 2909
Bst2UI CCWGG 3 cut(s) 401, 1438, 2216
Bst4CI ACNGT 5 cut(s) 1060, 1584, 2001, 2721, 3085
Bst6I CTCTTC 5 cut(s) 37, 43, 49, 1118, 2690
BstACI GRCGYC 2 cut(s) 1452, 2765
BstAFI CTTAAG 2 cut(s) 1045, 2168
BstBAI YACGTR 1 cut(s) 2831
BstC8I GCNNGC 3 cut(s) 421, 1443, 2165
BstFNI CGCG 2 cut(s) 118, 1605
BstMAI GTCTC 5 cut(s) 2063, 2187, 2292, 2626, 2772
BstMCI CGRYCG 2 cut(s) 1826, 2608
BstMWI GCNNNNNNNGC 1 cut(s) 275
BstNI CCWGG 3 cut(s) 401, 1438, 2216
BstNSI RCATGY 2 cut(s) 1374, 1445
BstPAI GACNNNNGTC 1 cut(s) 1549
BstSCI CCNGG 3 cut(s) 399, 1436, 2214
BstSLI GKGCMC 1 cut(s) 1881
BstUI CGCG 2 cut(s) 118, 1605
BstV1I GCAGC 3 cut(s) 482, 497, 1851
BstV2I GAAGAC 2 cut(s) 48, 642
BstX2I RGATCY 6 cut(s) 312, 370, 1228, 2218, 2356, 2798
BstYI RGATCY 6 cut(s) 312, 370, 1228, 2218, 2356, 2798
BstZ17I GTATAC 1 cut(s) 736
Bsu15I ATCGAT 1 cut(s) 180
BsuI GTATCC 1 cut(s) 106
BsuTUI ATCGAT 1 cut(s) 180
BtsI GCAGTG 1 cut(s) 2229
BtsIMutI CAGTG 2 cut(s) 2229, 3106
BtuMI TCGCGA 1 cut(s) 1605
BveI ACCTGC 1 cut(s) 2864
Cac8I GCNNGC 3 cut(s) 421, 1443, 2165
Cfr10I RCCGGY 3 cut(s) 2270, 2425, 2481
Cfr13I GGNCC 7 cut(s) 397, 504, 1001, 1877, 1878, 1948, 2162
ClaI ATCGAT 1 cut(s) 180
Csp6I GTAC 4 cut(s) 142, 649, 1146, 2318
CspAI ACCGGT 1 cut(s) 2425
CviQI GTAC 4 cut(s) 142, 649, 1146, 2318
DraI TTTAAA 2 cut(s) 594, 1381
DriI GACNNNNNGTC 1 cut(s) 2200
EaeI YGGCCR 2 cut(s) 2053, 2688
Eam1104I CTCTTC 5 cut(s) 37, 43, 49, 1118, 2690
Eam1105I GACNNNNNGTC 1 cut(s) 2200
EarI CTCTTC 5 cut(s) 37, 43, 49, 1118, 2690
EciI GGCGGA 1 cut(s) 717
Eco130I CCWWGG 1 cut(s) 1847
Eco147I AGGCCT 1 cut(s) 1469
Eco24I GRGCYC 2 cut(s) 1054, 1881
Eco32I GATATC 2 cut(s) 561, 1286
Eco47I GGWCC 2 cut(s) 1001, 1948
Eco57I CTGAAG 3 cut(s) 85, 923, 2823
Eco72I CACGTG 1 cut(s) 2831
EcoO109I RGGNCCY 2 cut(s) 1878, 1948
EcoRI GAATTC 2 cut(s) 1968, 2807
EcoRII CCWGG 3 cut(s) 399, 1436, 2214
EcoRV GATATC 2 cut(s) 561, 1286
EcoT14I CCWWGG 1 cut(s) 1847
EcoT22I ATGCAT 4 cut(s) 280, 587, 1267, 1509
EcoT38I GRGCYC 2 cut(s) 1054, 1881
ErhI CCWWGG 1 cut(s) 1847
Esp3I CGTCTC 2 cut(s) 2063, 2772
FalI AAGNNNNNCTT 8 cut(s) 278, 310, 428, 460, 627, 659, 1344, 1376
FaqI GGGAC 3 cut(s) 1537, 1961, 2960
FauI CCCGC 2 cut(s) 2172, 2719
FbaI TGATCA 2 cut(s) 1339, 1473
FblI GTMKAC 2 cut(s) 735, 1579
Fnu4HI GCNGC 4 cut(s) 471, 486, 1865, 3116
FriOI GRGCYC 2 cut(s) 1054, 1881
Fsp4HI GCNGC 4 cut(s) 471, 486, 1865, 3116
FspBI CTAG 3 cut(s) 1895, 2295, 2468
GluI GCNGC 4 cut(s) 471, 486, 1865, 3116
GsuI CTGGAG 3 cut(s) 1002, 2087, 2372
HapII CCGG 3 cut(s) 2271, 2426, 2482
Hin1I GRCGYC 2 cut(s) 1452, 2765
HincII GTYRAC 3 cut(s) 717, 2668, 2775
HindII GTYRAC 3 cut(s) 717, 2668, 2775
HindIII AAGCTT 3 cut(s) 1702, 1993, 2381
HpaII CCGG 3 cut(s) 2271, 2426, 2482
HphI GGTGA 6 cut(s) 419, 1397, 2077, 2260, 2709, 2845
Hpy99I CGWCG 6 cut(s) 379, 1454, 1575, 1831, 2075, 3053
HpyCH4III ACNGT 5 cut(s) 1060, 1584, 2001, 2721, 3085
HpyCH4IV ACGT 7 cut(s) 870, 1452, 1573, 1869, 2347, 2765, 2830
HpyF10VI GCNNNNNNNGC 1 cut(s) 275
HpySE526I ACGT 7 cut(s) 870, 1452, 1573, 1869, 2347, 2765, 2830
Hsp92I GRCGYC 2 cut(s) 1452, 2765
Ksp22I TGATCA 2 cut(s) 1339, 1473
LguI GCTCTTC 1 cut(s) 1118
LmnI GCTCC 5 cut(s) 26, 217, 791, 2008, 2106
Lsp1109I GCAGC 3 cut(s) 482, 497, 1851
LweI GCATC 7 cut(s) 287, 594, 803, 1252, 1494, 1656, 3102
MaeI CTAG 3 cut(s) 1895, 2295, 2468
MaeII ACGT 7 cut(s) 870, 1452, 1573, 1869, 2347, 2765, 2830
MaeIII GTNAC 9 cut(s) 119, 1322, 1385, 1424, 2093, 2244, 2386, 2992, 3079
MfeI CAATTG 3 cut(s) 414, 1940, 2941
MflI RGATCY 6 cut(s) 312, 370, 1228, 2218, 2356, 2798
MhlI GDGCHC 3 cut(s) 1054, 1881, 2910
MlsI TGGCCA 1 cut(s) 2690
MluI ACGCGT 1 cut(s) 116
MluNI TGGCCA 1 cut(s) 2690
MlyI GAGTC 5 cut(s) 1559, 1882, 2628, 2770, 3213
MmeI TCCRAC 5 cut(s) 357, 443, 595, 2239, 2420
Mox20I TGGCCA 1 cut(s) 2690
Mph1103I ATGCAT 4 cut(s) 280, 587, 1267, 1509
MroXI GAANNNNTTC 2 cut(s) 1539, 2412
MscI TGGCCA 1 cut(s) 2690
MslI CAYNNNNRTG 2 cut(s) 1502, 1872
Msp20I TGGCCA 1 cut(s) 2690
MspA1I CMGCKG 1 cut(s) 1698
MspCI CTTAAG 2 cut(s) 1045, 2168
MspI CCGG 3 cut(s) 2271, 2426, 2482
MspR9I CCNGG 3 cut(s) 401, 1438, 2216
MunI CAATTG 3 cut(s) 414, 1940, 2941
Mva1269I GAATGC 1 cut(s) 2378
MvaI CCWGG 3 cut(s) 401, 1438, 2216
MvnI CGCG 2 cut(s) 118, 1605
MwoI GCNNNNNNNGC 1 cut(s) 275
NlaIV GGNNCC 4 cut(s) 28, 1879, 1949, 2731
NmuCI GTSAC 3 cut(s) 1385, 1424, 2992
NruI TCGCGA 1 cut(s) 1605
NsiI ATGCAT 4 cut(s) 280, 587, 1267, 1509
NspI RCATGY 2 cut(s) 1374, 1445
OliI CACNNNNGTG 1 cut(s) 1872
PaeI GCATGC 1 cut(s) 1445
PaqCI CACCTGC 1 cut(s) 2864
PceI AGGCCT 1 cut(s) 1469
PciSI GCTCTTC 1 cut(s) 1118
PcsI WCGNNNNNNNCGW 2 cut(s) 1832, 2067
PctI GAATGC 1 cut(s) 2378
PdmI GAANNNNTTC 2 cut(s) 1539, 2412
PinAI ACCGGT 1 cut(s) 2425
PkrI GCNGC 4 cut(s) 472, 487, 1866, 3117
Ple19I CGATCG 1 cut(s) 1826
PleI GAGTC 5 cut(s) 1558, 1882, 2628, 2770, 3212
PmaCI CACGTG 1 cut(s) 2831
PmlI CACGTG 1 cut(s) 2831
PpsI GAGTC 5 cut(s) 1558, 1882, 2628, 2770, 3212
Ppu21I YACGTR 1 cut(s) 2831
PpuMI RGGWCCY 1 cut(s) 1948
PshAI GACNNNNGTC 1 cut(s) 1549
Psp5II RGGWCCY 1 cut(s) 1948
Psp6I CCWGG 3 cut(s) 399, 1436, 2214
PspCI CACGTG 1 cut(s) 2831
PspGI CCWGG 3 cut(s) 399, 1436, 2214
PspN4I GGNNCC 4 cut(s) 28, 1879, 1949, 2731
PspOMI GGGCCC 1 cut(s) 1877
PspPI GGNCC 7 cut(s) 397, 504, 1001, 1877, 1878, 1948, 2162
PspPPI RGGWCCY 1 cut(s) 1948
PsuI RGATCY 6 cut(s) 312, 370, 1228, 2218, 2356, 2798
PvuI CGATCG 1 cut(s) 1826
RruI TCGCGA 1 cut(s) 1605
RsaI GTAC 4 cut(s) 143, 650, 1147, 2319
RsaNI GTAC 4 cut(s) 142, 649, 1146, 2318
RseI CAYNNNNRTG 2 cut(s) 1502, 1872
SapI GCTCTTC 1 cut(s) 1118
SatI GCNGC 4 cut(s) 471, 486, 1865, 3116
Sau96I GGNCC 7 cut(s) 397, 504, 1001, 1877, 1878, 1948, 2162
ScaI AGTACT 1 cut(s) 650
SchI GAGTC 5 cut(s) 1559, 1882, 2628, 2770, 3213
ScrFI CCNGG 3 cut(s) 401, 1438, 2216
SduI GDGCHC 3 cut(s) 1054, 1881, 2910
SfaNI GCATC 7 cut(s) 287, 594, 803, 1252, 1494, 1656, 3102
SinI GGWCC 2 cut(s) 1001, 1948
SmiMI CAYNNNNRTG 2 cut(s) 1502, 1872
SmlI CTYRAG 5 cut(s) 644, 775, 1045, 1613, 2168
SmoI CTYRAG 5 cut(s) 644, 775, 1045, 1613, 2168
SpeI ACTAGT 1 cut(s) 1894
SphI GCATGC 1 cut(s) 1445
SseBI AGGCCT 1 cut(s) 1469
SsiI CCGC 8 cut(s) 110, 145, 702, 789, 1698, 2165, 2726, 3116
SspMI CTAG 3 cut(s) 1895, 2295, 2468
StuI AGGCCT 1 cut(s) 1469
StyD4I CCNGG 3 cut(s) 399, 1436, 2214
StyI CCWWGG 1 cut(s) 1847
TaaI ACNGT 5 cut(s) 1060, 1584, 2001, 2721, 3085
TaiI ACGT 7 cut(s) 873, 1455, 1576, 1872, 2350, 2768, 2833
TaqI TCGA 8 cut(s) 180, 225, 1449, 1543, 1740, 2061, 3136, 3216
TaqII GACCGA 1 cut(s) 2594
TatI WGTACW 1 cut(s) 648
TauI GCSGC 1 cut(s) 3118
TscAI CASTG 2 cut(s) 2236, 3106
TseFI GTSAC 3 cut(s) 1385, 1424, 2992
TseI GCWGC 3 cut(s) 470, 485, 1864
Tsp45I GTSAC 3 cut(s) 1385, 1424, 2992
TspGWI ACGGA 4 cut(s) 363, 1163, 1191, 1646
TspRI CASTG 2 cut(s) 2236, 3106
Vha464I CTTAAG 2 cut(s) 1045, 2168
VpaK11BI GGWCC 2 cut(s) 1001, 1948
XbaI TCTAGA 1 cut(s) 2467
XceI RCATGY 2 cut(s) 1374, 1445
XcmI CCANNNNNNNNNTGG 2 cut(s) 340, 2740
XmiI GTMKAC 2 cut(s) 735, 1579
XmnI GAANNNNTTC 2 cut(s) 1539, 2412
XspI CTAG 3 cut(s) 1895, 2295, 2468
ZraI GACGTC 2 cut(s) 1453, 2766
ZrmI AGTACT 1 cut(s) 650
Zsp2I ATGCAT 4 cut(s) 280, 587, 1267, 1509
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.