Rorug06G0107800

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0015541
Physical Location & Seq
Reverse (-)
14637922 .. 14642544
4623 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0107800.1

Sequence Viewer

Length: 1815 bp
ATGAAGCCATTCAAGTTCATGGAGGGAGTTTCAAAACACAAACGCTCCAATAGTGACCCGGTGAAAAGAAAGGTTGGGAAGGATAAATTGAATAGCATCATCTTAGCTCCTTACAGACTTGGAAATAGAGAAATGGGAAGACCAAACAGCTGTGTCGAAGAGCAACCCAATTGTTCTGATGTTCAAGGTTCCTTAAATCAGGAGGACCAACTTGTGGCACGTCATGCTTTAGAGAAGGCTTTAAGTTATCAGCACCTATCATACGATGCTACGATCGAAGACTCACTCCCAGAGTCTGCCAAGGACCTAATAAAGGACATTACAGTTTTAGAACTAGAAGTTGTCTTTTTGGAGCGCCATCTTCTATCCTTATACAGGAAAACGTTTGATCAACTCATACCATCTGAATTGACTGTGGCCGAAAGACAGAGTTCTTCTTCAGTCACACATAAAGGAAGTTATAAAGAAGTTTCTGGACAAGATGTTACACCAGAAAGTAACAAAATAATCACCTACGCTGATGATCTTACATTGCCTCGGAGTACATCTGGCAAACCATTCAAGGAATGCAACGGCATATGGGAACCAGAAAAACTGTTAGATTTGAGCATTCATCGTTGCTATTCCTCCCTGTCTCAGCGTTCAACTTGTTCACCGAAAACTTCTCCTCGAACAAAATGTCAAACTAAAAATGGAGATTCATACCACTCCTTACCTTTCTCAATGCTAGAGCAAGCGCAGTTTGCAACTTCAAATTTATATGCAGAAGAACATCTTGGAAGTTATTTCTCTGATCATGTTCCAGAAACACCAAACTGCCTTTCTGAAGAAATGATCAAGTGCATTTCAGCAATATATTGTGAACTTGCTGACCCGCCTATTATCAATAACGGTTACACTTGCTCTCCAATCACATTCTCAGCACCAATGCATGACTTTTCGTCACAGGCTGAAAGTGAAAAGTGGAGTTCCCGGCGCACGAAAATTCCGTTTTTCAATTCACAATCTGAAAAGCCTATCCACTTTGAAGGATCAGAAGAATTGAGTGGACCTTACTGTAGAATGCTAAAGGTACAGTGCATCAGTGAGGATACGGAGAAGTTAAGAGATGTTGAACACACACTAAAGAAATTTAGCTCACTTGTTTATCAGTTGGAAGGAGTGGATCTCAGAAAGATGAAACATGAAGAGAAGTTAGCCTTTTGGATTAACGTGCACAATGCACTCGTTATGCATACATTTTTAACATATGGGATTCCACAAAATTATTCAAAAAGAGTTTCATTGCCACTCAAGTCTGCATATAATGTGGGAGGTCACACCATAAGTGTAGACATGATACAGAGGTCCATTTTGGGGTGCAGATTGCCTCGTCCTGGACAATGGCTGCGGCTGTTGTTTACCATGAAAACAAAGTTCAAGGCTGGAGATGCACGCAAATCGTATGCAATTGAGCAACCCGAACCTCTCTTGCATTTTGCACTCTGCTCAGGAAGCTATTCCGATCCTGCGGTGCGTATGTACACATCAAAGAGAGTGTTTGAGGAGCTGGAAACTGCAAAAGAGGAGTACATCCAATCAACCTTCCTTCTGCACAAGGAACAGAAAATCCTTCTTCCAAAGATTGTGGAGTCATTTGCAAAGGACTCAGGATTATGCTCTGCCGGTTTGGTAGAGATGATTGAGCATTTACTGCCTAACTCTGAAAGAAAAAGTAATCACCAGTGCCAACAGAGAAGAATATGGAAGGCAATTGATTGGATTCCTCACAACTTTACTTTCCGCTATCTTATCCCAAAAGAAGTAGCTTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

604

Amino Acids

69.05

Weight (kDa)

7.82

Isoelectric Point (pI)

50.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lzipper-MIP1 PF14389 65 - 131 2e-13 Leucine-zipper of ternary complex factor MIP1
DUF547 PF04784 390 - 525 5.6e-41 Protein of unknown function, DUF547
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015541)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g14810
malus_domestica MD14G1026500.v1.1
prunus_persica Prupe.8G017600_v2.0.a1
pyrus_communis pycom14g02530
rosa_chinensis RchiOBHm_Chr6g0277401
rosa_laevigata RLG00000013305
rosa_multiflora Rmu_co8455877.1_g000001 Rmu_sc0000030.1_g000006 Rmu_sc0004888.1_g000004
rosa_roxburghii Rroxscaffold_7G00191380
rosa_rugosa Rorug06G0107800 Rorug06G0107800 Rorug06G0107800 Rorug06G0107900
rosa_samantha Rh6DG215400
rosa_wichuraiana Rw6G019160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 462
AccB7I CCANNNNNTGG 1 cut(s) 214
AccI GTMKAC 1 cut(s) 1332
AciI CCGC 4 cut(s) 875, 1390, 1511, 1783
AclI AACGTT 1 cut(s) 383
AclWI GGATC 3 cut(s) 1039, 1173, 1499
AcoI YGGCCR 1 cut(s) 417
AcsI RAATTY 3 cut(s) 754, 984, 1130
AcuI CTGAAG 2 cut(s) 423, 846
AfaI GTAC 4 cut(s) 544, 1074, 1523, 1571
AfiI CCNNNNNNNGG 5 cut(s) 214, 313, 375, 1356, 1376
AhdI GACNNNNNGTC 1 cut(s) 940
AjiI CACGTC 1 cut(s) 221
AjnI CCWGG 1 cut(s) 1375
AjuI GAANNNNNNNTTGG 4 cut(s) 759, 791, 805, 837
AloI GAACNNNNNNTCC 2 cut(s) 1593, 1625
AluBI AGCT 6 cut(s) 107, 150, 1137, 1497, 1549, 1808
AluI AGCT 6 cut(s) 107, 150, 1137, 1497, 1549, 1808
Alw21I GWGCWC 1 cut(s) 1218
Alw26I GTCTC 1 cut(s) 639
Alw44I GTGCAC 1 cut(s) 1214
AlwI GGATC 3 cut(s) 1039, 1173, 1499
AlwNI CAGNNNCTG 1 cut(s) 296
AoxI GGCC 1 cut(s) 417
ApaLI GTGCAC 1 cut(s) 1214
ApeKI GCWGC 1 cut(s) 1387
ApoI RAATTY 3 cut(s) 754, 984, 1130
ArsI GACNNNNNNTTYG 2 cut(s) 664, 696
Asp700I GAANNNNTTC 2 cut(s) 8, 1498
AspLEI GCGC 3 cut(s) 357, 739, 978
AspS9I GGNCC 4 cut(s) 205, 304, 1049, 1347
AsuC2I CCSGG 2 cut(s) 59, 973
AsuHPI GGTGA 4 cut(s) 73, 502, 645, 1712
AvaII GGWCC 4 cut(s) 205, 304, 1049, 1347
BaeGI GKGCMC 1 cut(s) 1218
BaeI ACNNNNGTAYC 2 cut(s) 1331, 1364
BbsI GAAGAC 2 cut(s) 145, 285
Bbv12I GWGCWC 1 cut(s) 1218
BbvI GCAGC 1 cut(s) 1374
BccI CCATC 2 cut(s) 366, 409
BceAI ACGGC 1 cut(s) 589
BcgI CGANNNNNNTGC 2 cut(s) 1422, 1456
BciT130I CCWGG 1 cut(s) 1377
BciVI GTATCC 1 cut(s) 1084
BclI TGATCA 3 cut(s) 388, 793, 834
BcnI CCSGG 2 cut(s) 59, 973
BcoDI GTCTC 1 cut(s) 639
BfaI CTAG 2 cut(s) 335, 728
BfmI CTRYAG 1 cut(s) 1057
BfoI RGCGCY 1 cut(s) 358
BfuI GTATCC 1 cut(s) 1084
BisI GCNGC 2 cut(s) 1388, 1391
BlsI GCNGC 2 cut(s) 1389, 1392
Bme1390I CCNGG 3 cut(s) 59, 973, 1377
Bme18I GGWCC 4 cut(s) 205, 304, 1049, 1347
BmeRI GACNNNNNGTC 1 cut(s) 940
BmgBI CACGTC 1 cut(s) 221
BmgT120I GGNCC 4 cut(s) 205, 304, 1049, 1347
BmiI GGNNCC 2 cut(s) 190, 585
BmrFI CCNGG 3 cut(s) 59, 973, 1377
BmsI GCATC 4 cut(s) 105, 256, 1089, 1420
BpiI GAAGAC 2 cut(s) 145, 285
BplI GAGNNNNNCTC 2 cut(s) 1152, 1184
BpmI CTGGAG 1 cut(s) 1446
Bpu10I CCTNAGC 1 cut(s) 1489
BpuEI CTTGAG 1 cut(s) 1277
BpuMI CCSGG 2 cut(s) 59, 973
BsaJI CCNNGG 2 cut(s) 300, 536
BsaXI ACNNNNNCTCC 4 cut(s) 29, 59, 889, 919
Bsc4I CCNNNNNNNGG 5 cut(s) 214, 313, 375, 1356, 1376
Bse118I RCCGGY 1 cut(s) 1664
Bse1I ACTGG 1 cut(s) 1723
Bse3DI GCAATG 2 cut(s) 530, 1283
BseBI CCWGG 1 cut(s) 1377
BseDI CCNNGG 2 cut(s) 300, 536
BseGI GGATG 1 cut(s) 1572
BseLI CCNNNNNNNGG 5 cut(s) 214, 313, 375, 1356, 1376
BseMI GCAATG 2 cut(s) 530, 1283
BseMII CTCAG 5 cut(s) 650, 933, 1183, 1503, 1662
BseNI ACTGG 1 cut(s) 1723
BseRI GAGGAG 3 cut(s) 657, 1559, 1580
BseSI GKGCMC 1 cut(s) 1218
BseXI GCAGC 1 cut(s) 1374
BsgI GTGCAG 2 cut(s) 1381, 1577
Bsh1285I CGRYCG 1 cut(s) 276
BshFI GGCC 1 cut(s) 419
BsiEI CGRYCG 1 cut(s) 276
BsiHKAI GWGCWC 1 cut(s) 1218
BsiSI CCGG 3 cut(s) 59, 973, 1665
BslI CCNNNNNNNGG 5 cut(s) 214, 313, 375, 1356, 1376
BsmAI GTCTC 1 cut(s) 639
BsmI GAATGC 3 cut(s) 572, 609, 1068
BsnI GGCC 1 cut(s) 419
Bsp1286I GDGCHC 1 cut(s) 1218
Bsp1407I TGTACA 1 cut(s) 1521
Bsp143I GATC 8 cut(s) 273, 388, 523, 793, 834, 1031, 1165, 1504
BspACI CCGC 4 cut(s) 875, 1390, 1511, 1783
BspANI GGCC 1 cut(s) 419
BspCNI CTCAG 5 cut(s) 649, 932, 1182, 1502, 1661
BspLI GGNNCC 2 cut(s) 190, 585
BspPI GGATC 3 cut(s) 1039, 1173, 1499
BspQI GCTCTTC 1 cut(s) 153
BsrDI GCAATG 2 cut(s) 530, 1283
BsrFI RCCGGY 1 cut(s) 1664
BsrGI TGTACA 1 cut(s) 1521
BsrI ACTGG 1 cut(s) 1723
BssAI RCCGGY 1 cut(s) 1664
BssECI CCNNGG 2 cut(s) 300, 536
BssMI GATC 8 cut(s) 273, 388, 523, 793, 834, 1031, 1165, 1504
BssT1I CCWWGG 1 cut(s) 300
Bst2UI CCWGG 1 cut(s) 1377
Bst4CI ACNGT 6 cut(s) 325, 415, 597, 893, 1058, 1077
Bst6I CTCTTC 2 cut(s) 153, 1182
BstAPI GCANNNNNTGC 2 cut(s) 224, 1693
BstAUI TGTACA 1 cut(s) 1521
BstC8I GCNNGC 2 cut(s) 735, 1435
BstDEI CTNAG 6 cut(s) 103, 636, 919, 1169, 1489, 1648
BstENI CCTNNNNNAGG 2 cut(s) 311, 373
BstF5I GGATG 1 cut(s) 1572
BstH2I RGCGCY 1 cut(s) 358
BstHHI GCGC 3 cut(s) 357, 739, 978
BstKTI GATC 8 cut(s) 276, 391, 526, 796, 837, 1034, 1168, 1507
BstMAI GTCTC 1 cut(s) 639
BstMBI GATC 8 cut(s) 273, 388, 523, 793, 834, 1031, 1165, 1504
BstMCI CGRYCG 1 cut(s) 276
BstMWI GCNNNNNNNGC 5 cut(s) 224, 743, 1430, 1494, 1693
BstNI CCWGG 1 cut(s) 1377
BstSCI CCNGG 3 cut(s) 57, 971, 1375
BstSFI CTRYAG 1 cut(s) 1057
BstSLI GKGCMC 1 cut(s) 1218
BstV1I GCAGC 1 cut(s) 1374
BstV2I GAAGAC 2 cut(s) 145, 285
BstX2I RGATCY 1 cut(s) 1165
BstYI RGATCY 1 cut(s) 1165
BsuI GTATCC 1 cut(s) 1084
BsuRI GGCC 1 cut(s) 419
BtrI CACGTC 1 cut(s) 221
BtsCI GGATG 1 cut(s) 1572
BtsIMutI CAGTG 3 cut(s) 1082, 1090, 1730
Cac8I GCNNGC 2 cut(s) 735, 1435
CaiI CAGNNNCTG 1 cut(s) 296
CfoI GCGC 3 cut(s) 357, 739, 978
Cfr10I RCCGGY 1 cut(s) 1664
Cfr13I GGNCC 4 cut(s) 205, 304, 1049, 1347
Csp6I GTAC 4 cut(s) 543, 1073, 1522, 1570
CspCI CAANNNNNGTGG 2 cut(s) 1608, 1643
CviAII CATG 7 cut(s) 19, 224, 797, 932, 1184, 1336, 1405
CviQI GTAC 4 cut(s) 543, 1073, 1522, 1570
DdeI CTNAG 6 cut(s) 103, 636, 919, 1169, 1489, 1648
DpnI GATC 8 cut(s) 275, 390, 525, 795, 836, 1033, 1167, 1506
DpnII GATC 8 cut(s) 273, 388, 523, 793, 834, 1031, 1165, 1504
DriI GACNNNNNGTC 1 cut(s) 940
EaeI YGGCCR 1 cut(s) 417
Eam1104I CTCTTC 2 cut(s) 153, 1182
Eam1105I GACNNNNNGTC 1 cut(s) 940
EarI CTCTTC 2 cut(s) 153, 1182
Eco130I CCWWGG 1 cut(s) 300
Eco47I GGWCC 4 cut(s) 205, 304, 1049, 1347
Eco57I CTGAAG 2 cut(s) 423, 846
EcoNI CCTNNNNNAGG 2 cut(s) 311, 373
EcoO109I RGGNCCY 1 cut(s) 304
EcoRII CCWGG 1 cut(s) 1375
EcoT14I CCWWGG 1 cut(s) 300
EcoT22I ATGCAT 2 cut(s) 933, 1236
ErhI CCWWGG 1 cut(s) 300
FaeI CATG 7 cut(s) 22, 227, 800, 935, 1187, 1339, 1408
FalI AAGNNNNNCTT 4 cut(s) 759, 791, 1184, 1216
FatI CATG 7 cut(s) 18, 223, 796, 931, 1183, 1335, 1404
FauI CCCGC 1 cut(s) 882
FauNDI CATATG 2 cut(s) 578, 1249
FbaI TGATCA 3 cut(s) 388, 793, 834
FblI GTMKAC 1 cut(s) 1332
Fnu4HI GCNGC 2 cut(s) 1388, 1391
FokI GGATG 1 cut(s) 1559
Fsp4HI GCNGC 2 cut(s) 1388, 1391
FspBI CTAG 2 cut(s) 335, 728
GlaI GCGC 3 cut(s) 356, 738, 977
GluI GCNGC 2 cut(s) 1388, 1391
GsuI CTGGAG 1 cut(s) 1446
HaeII RGCGCY 1 cut(s) 358
HaeIII GGCC 1 cut(s) 419
HapII CCGG 3 cut(s) 59, 973, 1665
HhaI GCGC 3 cut(s) 357, 739, 978
Hin1II CATG 7 cut(s) 22, 227, 800, 935, 1187, 1339, 1408
Hin6I GCGC 3 cut(s) 355, 737, 976
HinP1I GCGC 3 cut(s) 355, 737, 976
HinfI GANTC 7 cut(s) 281, 293, 698, 1255, 1631, 1646, 1762
HpaII CCGG 3 cut(s) 59, 973, 1665
HphI GGTGA 4 cut(s) 73, 502, 645, 1712
Hpy166II GTNNAC 7 cut(s) 653, 863, 1049, 1216, 1333, 1401, 1524
Hpy188III TCNNGA 5 cut(s) 200, 474, 803, 1491, 1650
Hpy8I GTNNAC 7 cut(s) 653, 863, 1049, 1216, 1333, 1401, 1524
HpyAV CCTTC 8 cut(s) 73, 229, 1022, 1151, 1594, 1598, 1622, 1741
HpyCH4III ACNGT 6 cut(s) 325, 415, 597, 893, 1058, 1077
HpyCH4IV ACGT 3 cut(s) 220, 383, 1212
HpyF10VI GCNNNNNNNGC 5 cut(s) 224, 743, 1430, 1494, 1693
HpyF3I CTNAG 6 cut(s) 103, 636, 919, 1169, 1489, 1648
HpySE526I ACGT 3 cut(s) 220, 383, 1212
Hsp92II CATG 7 cut(s) 22, 227, 800, 935, 1187, 1339, 1408
HspAI GCGC 3 cut(s) 355, 737, 976
Ksp22I TGATCA 3 cut(s) 388, 793, 834
Kzo9I GATC 8 cut(s) 273, 388, 523, 793, 834, 1031, 1165, 1504
LguI GCTCTTC 1 cut(s) 153
LmnI GCTCC 4 cut(s) 50, 112, 352, 1546
Lsp1109I GCAGC 1 cut(s) 1374
LweI GCATC 4 cut(s) 105, 256, 1089, 1420
MaeI CTAG 2 cut(s) 335, 728
MaeII ACGT 3 cut(s) 220, 383, 1212
MaeIII GTNAC 7 cut(s) 53, 442, 484, 497, 893, 942, 1316
MalI GATC 8 cut(s) 275, 390, 525, 795, 836, 1033, 1167, 1506
MboI GATC 8 cut(s) 273, 388, 523, 793, 834, 1031, 1165, 1504
MfeI CAATTG 3 cut(s) 169, 1449, 1752
MflI RGATCY 1 cut(s) 1165
MhlI GDGCHC 1 cut(s) 1218
MlyI GAGTC 4 cut(s) 275, 302, 1640, 1640
MmeI TCCRAC 1 cut(s) 1134
Mph1103I ATGCAT 2 cut(s) 933, 1236
MroXI GAANNNNTTC 2 cut(s) 8, 1498
MseI TTAA 5 cut(s) 194, 242, 1103, 1209, 1244
MspA1I CMGCKG 1 cut(s) 150
MspI CCGG 3 cut(s) 59, 973, 1665
MspR9I CCNGG 3 cut(s) 59, 973, 1377
MunI CAATTG 3 cut(s) 169, 1449, 1752
Mva1269I GAATGC 3 cut(s) 572, 609, 1068
MvaI CCWGG 1 cut(s) 1377
MwoI GCNNNNNNNGC 5 cut(s) 224, 743, 1430, 1494, 1693
NciI CCSGG 2 cut(s) 59, 973
NdeI CATATG 2 cut(s) 578, 1249
NdeII GATC 8 cut(s) 273, 388, 523, 793, 834, 1031, 1165, 1504
NlaIII CATG 7 cut(s) 22, 227, 800, 935, 1187, 1339, 1408
NlaIV GGNNCC 2 cut(s) 190, 585
NmuCI GTSAC 4 cut(s) 53, 442, 942, 1316
NsiI ATGCAT 2 cut(s) 933, 1236
PciSI GCTCTTC 1 cut(s) 153
PcsI WCGNNNNNNNCGW 1 cut(s) 986
PctI GAATGC 3 cut(s) 572, 609, 1068
PdmI GAANNNNTTC 2 cut(s) 8, 1498
PfeI GAWTC 3 cut(s) 698, 1255, 1762
PflMI CCANNNNNTGG 1 cut(s) 214
PfoI TCCNGGA 1 cut(s) 1375
PkrI GCNGC 2 cut(s) 1389, 1392
Ple19I CGATCG 1 cut(s) 276
PleI GAGTC 4 cut(s) 275, 301, 1639, 1640
PpsI GAGTC 4 cut(s) 275, 301, 1639, 1640
PpuMI RGGWCCY 1 cut(s) 304
PsiI TTATAA 1 cut(s) 462
Psp1406I AACGTT 1 cut(s) 383
Psp5II RGGWCCY 1 cut(s) 304
Psp6I CCWGG 1 cut(s) 1375
PspGI CCWGG 1 cut(s) 1375
PspN4I GGNNCC 2 cut(s) 190, 585
PspPI GGNCC 4 cut(s) 205, 304, 1049, 1347
PspPPI RGGWCCY 1 cut(s) 304
PstNI CAGNNNCTG 1 cut(s) 296
PsuI RGATCY 1 cut(s) 1165
PvuI CGATCG 1 cut(s) 276
PvuII CAGCTG 1 cut(s) 150
RsaI GTAC 4 cut(s) 544, 1074, 1523, 1571
RsaNI GTAC 4 cut(s) 543, 1073, 1522, 1570
SapI GCTCTTC 1 cut(s) 153
SaqAI TTAA 5 cut(s) 194, 242, 1103, 1209, 1244
SatI GCNGC 2 cut(s) 1388, 1391
Sau3AI GATC 8 cut(s) 273, 388, 523, 793, 834, 1031, 1165, 1504
Sau96I GGNCC 4 cut(s) 205, 304, 1049, 1347
SchI GAGTC 4 cut(s) 275, 302, 1640, 1640
ScrFI CCNGG 3 cut(s) 59, 973, 1377
SduI GDGCHC 1 cut(s) 1218
SfaNI GCATC 4 cut(s) 105, 256, 1089, 1420
SfcI CTRYAG 1 cut(s) 1057
SinI GGWCC 4 cut(s) 205, 304, 1049, 1347
SmlI CTYRAG 1 cut(s) 1292
SmoI CTYRAG 1 cut(s) 1292
SsiI CCGC 4 cut(s) 875, 1390, 1511, 1783
SspMI CTAG 2 cut(s) 335, 728
StyD4I CCNGG 3 cut(s) 57, 971, 1375
StyI CCWWGG 1 cut(s) 300
TaaI ACNGT 6 cut(s) 325, 415, 597, 893, 1058, 1077
TaiI ACGT 3 cut(s) 223, 386, 1215
TaqI TCGA 3 cut(s) 156, 276, 670
TatI WGTACW 3 cut(s) 542, 1521, 1569
TauI GCSGC 1 cut(s) 1393
TfiI GAWTC 3 cut(s) 698, 1255, 1762
Tru1I TTAA 5 cut(s) 194, 242, 1103, 1209, 1244
Tru9I TTAA 5 cut(s) 194, 242, 1103, 1209, 1244
TscAI CASTG 3 cut(s) 1082, 1090, 1730
TseFI GTSAC 4 cut(s) 53, 442, 942, 1316
TseI GCWGC 1 cut(s) 1387
Tsp45I GTSAC 4 cut(s) 53, 442, 942, 1316
TspDTI ATGAA 8 cut(s) 7, 17, 602, 690, 1193, 1200, 1272, 1421
TspGWI ACGGA 2 cut(s) 978, 1109
TspRI CASTG 3 cut(s) 1082, 1090, 1730
Van91I CCANNNNNTGG 1 cut(s) 214
VneI GTGCAC 1 cut(s) 1214
VpaK11BI GGWCC 4 cut(s) 205, 304, 1049, 1347
XagI CCTNNNNNAGG 2 cut(s) 311, 373
XapI RAATTY 3 cut(s) 754, 984, 1130
XmiI GTMKAC 1 cut(s) 1332
XmnI GAANNNNTTC 2 cut(s) 8, 1498
XspI CTAG 2 cut(s) 335, 728
Zsp2I ATGCAT 2 cut(s) 933, 1236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.